HEADER OXIDOREDUCTASE 20-NOV-09 2WYV TITLE HIGH RESOLUTION STRUCTURE OF THERMUS THERMOPHILUS ENOYL-ACYL CARRIER TITLE 2 PROTEIN REDUCTASE NAD-FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL CARRIER PROTEIN] REDUCTASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.3.1.10; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 ATCC: 27634; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A; SOURCE 11 OTHER_DETAILS: THERMUS THERMOPHILUS DNA OBTAINED FROM PROF. WOLFGANG SOURCE 12 LIEBL, GOETTINGEN. KEYWDS OXIDOREDUCTASE, FATTY ACID BIOSYNTHESIS, OXIDATION REDUCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.M.OTERO,A.J.NOEL,P.GUARDADO-CALVO,A.L.LLAMAS-SAIZ,M.J.VAN RAAIJ REVDAT 5 20-DEC-23 2WYV 1 REMARK LINK REVDAT 4 31-JAN-18 2WYV 1 SOURCE JRNL REVDAT 3 17-OCT-12 2WYV 1 JRNL REVDAT 2 10-OCT-12 2WYV 1 JRNL REMARK REVDAT 1 24-NOV-10 2WYV 0 JRNL AUTH J.M.OTERO,A.J.NOEL,P.GUARDADO-CALVO,A.L.LLAMAS-SAIZ,W.WENDE, JRNL AUTH 2 B.SCHIERLING,A.PINGOUD,M.J.VAN RAAIJ JRNL TITL HIGH-RESOLUTION STRUCTURES OF THERMUS THERMOPHILUS JRNL TITL 2 ENOYL-ACYL CARRIER PROTEIN REDUCTASE IN THE APO FORM, IN JRNL TITL 3 COMPLEX WITH NAD+ AND IN COMPLEX WITH NAD+ AND TRICLOSAN. JRNL REF ACTA CRYSTALLOGR. SECT. F V. 68 1139 2012 JRNL REF 2 STRUCT. BIOL. CRYST. COMMUN. JRNL REFN ESSN 1744-3091 JRNL PMID 23027736 JRNL DOI 10.1107/S1744309112033982 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 76657 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1098 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9089 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7695 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 545 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.75000 REMARK 3 B22 (A**2) : -2.46000 REMARK 3 B33 (A**2) : 0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.35000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.118 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.043 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7932 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5356 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10752 ; 1.480 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13009 ; 1.016 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1008 ; 5.948 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 322 ;32.539 ;22.857 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1331 ;13.185 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 71 ;14.824 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1244 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8809 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1624 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1497 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5097 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3676 ; 0.167 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3713 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 366 ; 0.139 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 7 ; 0.154 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.207 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 42 ; 0.175 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.135 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5011 ; 0.817 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2080 ; 0.183 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7952 ; 1.480 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2921 ; 2.214 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2800 ; 3.791 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 2WYV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1290041772. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.939 REMARK 200 MONOCHROMATOR : SINGLE SILICON (111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : TOROIDAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77770 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2WYU REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) POLYETHYLENE GLYCOL 4000, REMARK 280 100 MM SODIUM CITRATE PH 5.4, 2 MM NAD REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.90000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -155.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 258 REMARK 465 LEU A 259 REMARK 465 GLU A 260 REMARK 465 GLY A 261 REMARK 465 VAL B 196 REMARK 465 ALA B 197 REMARK 465 ALA B 198 REMARK 465 ARG B 199 REMARK 465 SER B 200 REMARK 465 ILE B 201 REMARK 465 PRO B 202 REMARK 465 GLY B 203 REMARK 465 PHE B 204 REMARK 465 THR B 205 REMARK 465 LYS B 206 REMARK 465 MET B 207 REMARK 465 GLU B 260 REMARK 465 GLY B 261 REMARK 465 SER C 200 REMARK 465 ILE C 201 REMARK 465 PRO C 202 REMARK 465 GLY C 203 REMARK 465 PHE C 204 REMARK 465 THR C 205 REMARK 465 GLU C 260 REMARK 465 GLY C 261 REMARK 465 GLU D 258 REMARK 465 LEU D 259 REMARK 465 GLU D 260 REMARK 465 GLY D 261 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 2035 O HOH D 2080 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 65 138.39 -171.57 REMARK 500 ALA A 122 -54.80 -133.31 REMARK 500 ASN A 158 -129.46 51.14 REMARK 500 ASP A 249 25.29 -150.29 REMARK 500 ALA A 250 19.92 59.96 REMARK 500 ALA B 65 131.48 -173.98 REMARK 500 ALA B 122 -55.25 -128.99 REMARK 500 TYR B 148 -44.24 -28.75 REMARK 500 LYS B 156 -18.06 88.75 REMARK 500 ASN B 158 -126.17 51.06 REMARK 500 ARG B 194 80.64 -60.63 REMARK 500 ASP B 249 23.46 -146.45 REMARK 500 ARG C 20 74.35 -100.94 REMARK 500 ALA C 122 -51.84 -121.25 REMARK 500 LYS C 156 -8.14 72.47 REMARK 500 ASN C 158 -129.75 52.68 REMARK 500 ARG C 194 94.58 -64.32 REMARK 500 ASP C 249 20.37 -144.61 REMARK 500 ALA D 122 -51.99 -129.15 REMARK 500 LYS D 156 -19.32 70.95 REMARK 500 ASN D 158 -129.22 53.28 REMARK 500 ASP D 249 24.50 -144.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2008 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH B2020 DISTANCE = 6.20 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1258 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 100 O REMARK 620 2 GLU A 103 O 80.9 REMARK 620 3 HOH A2087 O 161.7 94.4 REMARK 620 4 HOH A2088 O 88.2 79.7 108.5 REMARK 620 5 HOH A2093 O 90.0 160.2 99.4 82.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1261 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 100 O REMARK 620 2 GLU B 103 O 83.9 REMARK 620 3 HOH B2074 O 152.0 84.3 REMARK 620 4 HOH B2075 O 99.7 80.5 103.3 REMARK 620 5 HOH B2081 O 99.1 168.2 97.6 87.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C1260 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 100 O REMARK 620 2 GLU C 103 O 81.7 REMARK 620 3 HOH C2064 O 149.3 91.5 REMARK 620 4 HOH C2066 O 97.8 89.5 112.1 REMARK 620 5 HOH C2069 O 94.1 170.5 96.4 82.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 1260 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD D 1258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 1260 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WYW RELATED DB: PDB REMARK 900 HIGH RESOLUTION STRUCTURE OF THERMUS THERMOPHILUS ENOYL-ACYL REMARK 900 CARRIER PROTEIN REDUCTASE NAD AND TRICLOSAN-FORM REMARK 900 RELATED ID: 2WYU RELATED DB: PDB REMARK 900 HIGH RESOLUTION STRUCTURE OF THERMUS THERMOPHILUS ENOYL-ACYL REMARK 900 CARRIER PROTEIN REDUCTASE APO-FORM REMARK 900 RELATED ID: 1ULU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TT0143 FROM THERMUS THERMOPHILUS HB8 DBREF 2WYV A 1 261 UNP Q5SLI9 Q5SLI9_THET8 1 261 DBREF 2WYV B 1 261 UNP Q5SLI9 Q5SLI9_THET8 1 261 DBREF 2WYV C 1 261 UNP Q5SLI9 Q5SLI9_THET8 1 261 DBREF 2WYV D 1 261 UNP Q5SLI9 Q5SLI9_THET8 1 261 SEQRES 1 A 261 MET LEU THR VAL ASP LEU SER GLY LYS LYS ALA LEU VAL SEQRES 2 A 261 MET GLY VAL THR ASN GLN ARG SER LEU GLY PHE ALA ILE SEQRES 3 A 261 ALA ALA LYS LEU LYS GLU ALA GLY ALA GLU VAL ALA LEU SEQRES 4 A 261 SER TYR GLN ALA GLU ARG LEU ARG PRO GLU ALA GLU LYS SEQRES 5 A 261 LEU ALA GLU ALA LEU GLY GLY ALA LEU LEU PHE ARG ALA SEQRES 6 A 261 ASP VAL THR GLN ASP GLU GLU LEU ASP ALA LEU PHE ALA SEQRES 7 A 261 GLY VAL LYS GLU ALA PHE GLY GLY LEU ASP TYR LEU VAL SEQRES 8 A 261 HIS ALA ILE ALA PHE ALA PRO ARG GLU ALA MET GLU GLY SEQRES 9 A 261 ARG TYR ILE ASP THR ARG ARG GLN ASP TRP LEU LEU ALA SEQRES 10 A 261 LEU GLU VAL SER ALA TYR SER LEU VAL ALA VAL ALA ARG SEQRES 11 A 261 ARG ALA GLU PRO LEU LEU ARG GLU GLY GLY GLY ILE VAL SEQRES 12 A 261 THR LEU THR TYR TYR ALA SER GLU LYS VAL VAL PRO LYS SEQRES 13 A 261 TYR ASN VAL MET ALA ILE ALA LYS ALA ALA LEU GLU ALA SEQRES 14 A 261 SER VAL ARG TYR LEU ALA TYR GLU LEU GLY PRO LYS GLY SEQRES 15 A 261 VAL ARG VAL ASN ALA ILE SER ALA GLY PRO VAL ARG THR SEQRES 16 A 261 VAL ALA ALA ARG SER ILE PRO GLY PHE THR LYS MET TYR SEQRES 17 A 261 ASP ARG VAL ALA GLN THR ALA PRO LEU ARG ARG ASN ILE SEQRES 18 A 261 THR GLN GLU GLU VAL GLY ASN LEU GLY LEU PHE LEU LEU SEQRES 19 A 261 SER PRO LEU ALA SER GLY ILE THR GLY GLU VAL VAL TYR SEQRES 20 A 261 VAL ASP ALA GLY TYR HIS ILE MET GLY MET GLU LEU GLU SEQRES 21 A 261 GLY SEQRES 1 B 261 MET LEU THR VAL ASP LEU SER GLY LYS LYS ALA LEU VAL SEQRES 2 B 261 MET GLY VAL THR ASN GLN ARG SER LEU GLY PHE ALA ILE SEQRES 3 B 261 ALA ALA LYS LEU LYS GLU ALA GLY ALA GLU VAL ALA LEU SEQRES 4 B 261 SER TYR GLN ALA GLU ARG LEU ARG PRO GLU ALA GLU LYS SEQRES 5 B 261 LEU ALA GLU ALA LEU GLY GLY ALA LEU LEU PHE ARG ALA SEQRES 6 B 261 ASP VAL THR GLN ASP GLU GLU LEU ASP ALA LEU PHE ALA SEQRES 7 B 261 GLY VAL LYS GLU ALA PHE GLY GLY LEU ASP TYR LEU VAL SEQRES 8 B 261 HIS ALA ILE ALA PHE ALA PRO ARG GLU ALA MET GLU GLY SEQRES 9 B 261 ARG TYR ILE ASP THR ARG ARG GLN ASP TRP LEU LEU ALA SEQRES 10 B 261 LEU GLU VAL SER ALA TYR SER LEU VAL ALA VAL ALA ARG SEQRES 11 B 261 ARG ALA GLU PRO LEU LEU ARG GLU GLY GLY GLY ILE VAL SEQRES 12 B 261 THR LEU THR TYR TYR ALA SER GLU LYS VAL VAL PRO LYS SEQRES 13 B 261 TYR ASN VAL MET ALA ILE ALA LYS ALA ALA LEU GLU ALA SEQRES 14 B 261 SER VAL ARG TYR LEU ALA TYR GLU LEU GLY PRO LYS GLY SEQRES 15 B 261 VAL ARG VAL ASN ALA ILE SER ALA GLY PRO VAL ARG THR SEQRES 16 B 261 VAL ALA ALA ARG SER ILE PRO GLY PHE THR LYS MET TYR SEQRES 17 B 261 ASP ARG VAL ALA GLN THR ALA PRO LEU ARG ARG ASN ILE SEQRES 18 B 261 THR GLN GLU GLU VAL GLY ASN LEU GLY LEU PHE LEU LEU SEQRES 19 B 261 SER PRO LEU ALA SER GLY ILE THR GLY GLU VAL VAL TYR SEQRES 20 B 261 VAL ASP ALA GLY TYR HIS ILE MET GLY MET GLU LEU GLU SEQRES 21 B 261 GLY SEQRES 1 C 261 MET LEU THR VAL ASP LEU SER GLY LYS LYS ALA LEU VAL SEQRES 2 C 261 MET GLY VAL THR ASN GLN ARG SER LEU GLY PHE ALA ILE SEQRES 3 C 261 ALA ALA LYS LEU LYS GLU ALA GLY ALA GLU VAL ALA LEU SEQRES 4 C 261 SER TYR GLN ALA GLU ARG LEU ARG PRO GLU ALA GLU LYS SEQRES 5 C 261 LEU ALA GLU ALA LEU GLY GLY ALA LEU LEU PHE ARG ALA SEQRES 6 C 261 ASP VAL THR GLN ASP GLU GLU LEU ASP ALA LEU PHE ALA SEQRES 7 C 261 GLY VAL LYS GLU ALA PHE GLY GLY LEU ASP TYR LEU VAL SEQRES 8 C 261 HIS ALA ILE ALA PHE ALA PRO ARG GLU ALA MET GLU GLY SEQRES 9 C 261 ARG TYR ILE ASP THR ARG ARG GLN ASP TRP LEU LEU ALA SEQRES 10 C 261 LEU GLU VAL SER ALA TYR SER LEU VAL ALA VAL ALA ARG SEQRES 11 C 261 ARG ALA GLU PRO LEU LEU ARG GLU GLY GLY GLY ILE VAL SEQRES 12 C 261 THR LEU THR TYR TYR ALA SER GLU LYS VAL VAL PRO LYS SEQRES 13 C 261 TYR ASN VAL MET ALA ILE ALA LYS ALA ALA LEU GLU ALA SEQRES 14 C 261 SER VAL ARG TYR LEU ALA TYR GLU LEU GLY PRO LYS GLY SEQRES 15 C 261 VAL ARG VAL ASN ALA ILE SER ALA GLY PRO VAL ARG THR SEQRES 16 C 261 VAL ALA ALA ARG SER ILE PRO GLY PHE THR LYS MET TYR SEQRES 17 C 261 ASP ARG VAL ALA GLN THR ALA PRO LEU ARG ARG ASN ILE SEQRES 18 C 261 THR GLN GLU GLU VAL GLY ASN LEU GLY LEU PHE LEU LEU SEQRES 19 C 261 SER PRO LEU ALA SER GLY ILE THR GLY GLU VAL VAL TYR SEQRES 20 C 261 VAL ASP ALA GLY TYR HIS ILE MET GLY MET GLU LEU GLU SEQRES 21 C 261 GLY SEQRES 1 D 261 MET LEU THR VAL ASP LEU SER GLY LYS LYS ALA LEU VAL SEQRES 2 D 261 MET GLY VAL THR ASN GLN ARG SER LEU GLY PHE ALA ILE SEQRES 3 D 261 ALA ALA LYS LEU LYS GLU ALA GLY ALA GLU VAL ALA LEU SEQRES 4 D 261 SER TYR GLN ALA GLU ARG LEU ARG PRO GLU ALA GLU LYS SEQRES 5 D 261 LEU ALA GLU ALA LEU GLY GLY ALA LEU LEU PHE ARG ALA SEQRES 6 D 261 ASP VAL THR GLN ASP GLU GLU LEU ASP ALA LEU PHE ALA SEQRES 7 D 261 GLY VAL LYS GLU ALA PHE GLY GLY LEU ASP TYR LEU VAL SEQRES 8 D 261 HIS ALA ILE ALA PHE ALA PRO ARG GLU ALA MET GLU GLY SEQRES 9 D 261 ARG TYR ILE ASP THR ARG ARG GLN ASP TRP LEU LEU ALA SEQRES 10 D 261 LEU GLU VAL SER ALA TYR SER LEU VAL ALA VAL ALA ARG SEQRES 11 D 261 ARG ALA GLU PRO LEU LEU ARG GLU GLY GLY GLY ILE VAL SEQRES 12 D 261 THR LEU THR TYR TYR ALA SER GLU LYS VAL VAL PRO LYS SEQRES 13 D 261 TYR ASN VAL MET ALA ILE ALA LYS ALA ALA LEU GLU ALA SEQRES 14 D 261 SER VAL ARG TYR LEU ALA TYR GLU LEU GLY PRO LYS GLY SEQRES 15 D 261 VAL ARG VAL ASN ALA ILE SER ALA GLY PRO VAL ARG THR SEQRES 16 D 261 VAL ALA ALA ARG SER ILE PRO GLY PHE THR LYS MET TYR SEQRES 17 D 261 ASP ARG VAL ALA GLN THR ALA PRO LEU ARG ARG ASN ILE SEQRES 18 D 261 THR GLN GLU GLU VAL GLY ASN LEU GLY LEU PHE LEU LEU SEQRES 19 D 261 SER PRO LEU ALA SER GLY ILE THR GLY GLU VAL VAL TYR SEQRES 20 D 261 VAL ASP ALA GLY TYR HIS ILE MET GLY MET GLU LEU GLU SEQRES 21 D 261 GLY HET NA A1258 1 HET NAD B1260 44 HET NA B1261 1 HET NA C1260 1 HET NAD D1258 44 HETNAM NA SODIUM ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 5 NA 3(NA 1+) FORMUL 6 NAD 2(C21 H27 N7 O14 P2) FORMUL 10 HOH *545(H2 O) HELIX 1 1 SER A 21 ALA A 33 1 13 HELIX 2 2 ALA A 43 ARG A 45 5 3 HELIX 3 3 LEU A 46 LEU A 57 1 12 HELIX 4 4 GLN A 69 GLY A 85 1 17 HELIX 5 5 PRO A 98 GLU A 103 1 6 HELIX 6 6 ARG A 105 THR A 109 5 5 HELIX 7 7 ARG A 110 ALA A 122 1 13 HELIX 8 8 ALA A 122 GLU A 133 1 12 HELIX 9 9 TYR A 147 GLU A 151 5 5 HELIX 10 10 ASN A 158 GLY A 179 1 22 HELIX 11 11 PRO A 180 GLY A 182 5 3 HELIX 12 12 VAL A 196 ILE A 201 5 6 HELIX 13 13 GLY A 203 ALA A 215 1 13 HELIX 14 14 THR A 222 SER A 235 1 14 HELIX 15 15 PRO A 236 SER A 239 5 4 HELIX 16 16 GLY A 251 ILE A 254 5 4 HELIX 17 17 SER B 21 GLY B 34 1 14 HELIX 18 18 ALA B 43 ARG B 45 5 3 HELIX 19 19 LEU B 46 LEU B 57 1 12 HELIX 20 20 GLN B 69 GLY B 85 1 17 HELIX 21 21 PRO B 98 GLU B 103 1 6 HELIX 22 22 ARG B 105 THR B 109 5 5 HELIX 23 23 ARG B 110 ALA B 122 1 13 HELIX 24 24 ALA B 122 GLU B 133 1 12 HELIX 25 25 TYR B 147 GLU B 151 5 5 HELIX 26 26 ASN B 158 GLY B 179 1 22 HELIX 27 27 PRO B 180 GLY B 182 5 3 HELIX 28 28 TYR B 208 ALA B 215 1 8 HELIX 29 29 THR B 222 SER B 235 1 14 HELIX 30 30 PRO B 236 SER B 239 5 4 HELIX 31 31 GLY B 251 ILE B 254 5 4 HELIX 32 32 SER C 21 ALA C 33 1 13 HELIX 33 33 ALA C 43 ARG C 45 5 3 HELIX 34 34 LEU C 46 LEU C 57 1 12 HELIX 35 35 GLN C 69 GLY C 85 1 17 HELIX 36 36 PRO C 98 GLU C 103 1 6 HELIX 37 37 ARG C 105 THR C 109 5 5 HELIX 38 38 ARG C 110 ALA C 122 1 13 HELIX 39 39 ALA C 122 GLU C 133 1 12 HELIX 40 40 TYR C 147 GLU C 151 5 5 HELIX 41 41 ASN C 158 GLY C 179 1 22 HELIX 42 42 PRO C 180 GLY C 182 5 3 HELIX 43 43 LYS C 206 ALA C 215 1 10 HELIX 44 44 THR C 222 SER C 235 1 14 HELIX 45 45 PRO C 236 SER C 239 5 4 HELIX 46 46 GLY C 251 ILE C 254 5 4 HELIX 47 47 SER D 21 ALA D 33 1 13 HELIX 48 48 ALA D 43 ARG D 45 5 3 HELIX 49 49 LEU D 46 LEU D 57 1 12 HELIX 50 50 GLN D 69 GLY D 85 1 17 HELIX 51 51 PRO D 98 GLU D 103 1 6 HELIX 52 52 ARG D 105 THR D 109 5 5 HELIX 53 53 ARG D 110 ALA D 122 1 13 HELIX 54 54 ALA D 122 GLU D 133 1 12 HELIX 55 55 TYR D 147 GLU D 151 5 5 HELIX 56 56 ASN D 158 GLY D 179 1 22 HELIX 57 57 PRO D 180 GLY D 182 5 3 HELIX 58 58 THR D 195 ILE D 201 1 7 HELIX 59 59 GLY D 203 ALA D 215 1 13 HELIX 60 60 THR D 222 SER D 235 1 14 HELIX 61 61 PRO D 236 SER D 239 5 4 HELIX 62 62 GLY D 251 ILE D 254 5 4 SHEET 1 AA 2 LEU A 2 VAL A 4 0 SHEET 2 AA 2 LEU B 2 VAL B 4 -1 O LEU B 2 N VAL A 4 SHEET 1 AB 7 LEU A 61 ARG A 64 0 SHEET 2 AB 7 GLU A 36 TYR A 41 1 O VAL A 37 N LEU A 61 SHEET 3 AB 7 LYS A 10 MET A 14 1 O ALA A 11 N ALA A 38 SHEET 4 AB 7 LEU A 87 HIS A 92 1 N ASP A 88 O LYS A 10 SHEET 5 AB 7 LEU A 136 THR A 146 1 N ARG A 137 O LEU A 87 SHEET 6 AB 7 ARG A 184 ALA A 190 1 O ARG A 184 N ILE A 142 SHEET 7 AB 7 VAL A 245 VAL A 248 1 O VAL A 246 N SER A 189 SHEET 1 BA 7 LEU B 61 ARG B 64 0 SHEET 2 BA 7 GLU B 36 TYR B 41 1 O VAL B 37 N LEU B 61 SHEET 3 BA 7 LYS B 10 MET B 14 1 O ALA B 11 N ALA B 38 SHEET 4 BA 7 LEU B 87 HIS B 92 1 N ASP B 88 O LYS B 10 SHEET 5 BA 7 LEU B 136 THR B 146 1 N ARG B 137 O LEU B 87 SHEET 6 BA 7 ARG B 184 ALA B 190 1 O ARG B 184 N ILE B 142 SHEET 7 BA 7 VAL B 245 VAL B 248 1 O VAL B 246 N SER B 189 SHEET 1 CA 2 LEU C 2 VAL C 4 0 SHEET 2 CA 2 LEU D 2 VAL D 4 -1 O LEU D 2 N VAL C 4 SHEET 1 CB 7 LEU C 61 ARG C 64 0 SHEET 2 CB 7 GLU C 36 TYR C 41 1 O VAL C 37 N LEU C 61 SHEET 3 CB 7 LYS C 10 MET C 14 1 O ALA C 11 N ALA C 38 SHEET 4 CB 7 LEU C 87 HIS C 92 1 N ASP C 88 O LYS C 10 SHEET 5 CB 7 LEU C 136 THR C 146 1 N ARG C 137 O LEU C 87 SHEET 6 CB 7 ARG C 184 ALA C 190 1 O ARG C 184 N ILE C 142 SHEET 7 CB 7 VAL C 245 VAL C 248 1 O VAL C 246 N SER C 189 SHEET 1 DA 7 LEU D 61 ARG D 64 0 SHEET 2 DA 7 GLU D 36 TYR D 41 1 O VAL D 37 N LEU D 61 SHEET 3 DA 7 LYS D 10 MET D 14 1 O ALA D 11 N ALA D 38 SHEET 4 DA 7 LEU D 87 HIS D 92 1 N ASP D 88 O LYS D 10 SHEET 5 DA 7 LEU D 136 THR D 146 1 N ARG D 137 O LEU D 87 SHEET 6 DA 7 ARG D 184 ALA D 190 1 O ARG D 184 N ILE D 142 SHEET 7 DA 7 VAL D 245 VAL D 248 1 O VAL D 246 N SER D 189 LINK O GLU A 100 NA NA A1258 1555 1555 2.33 LINK O GLU A 103 NA NA A1258 1555 1555 2.58 LINK NA NA A1258 O HOH A2087 1555 1555 2.37 LINK NA NA A1258 O HOH A2088 1555 1555 2.42 LINK NA NA A1258 O HOH A2093 1555 1555 2.43 LINK O GLU B 100 NA NA B1261 1555 1555 2.23 LINK O GLU B 103 NA NA B1261 1555 1555 2.55 LINK NA NA B1261 O HOH B2074 1555 1555 2.72 LINK NA NA B1261 O HOH B2075 1555 1555 2.46 LINK NA NA B1261 O HOH B2081 1555 1555 2.11 LINK O GLU C 100 NA NA C1260 1555 1555 2.33 LINK O GLU C 103 NA NA C1260 1555 1555 2.31 LINK NA NA C1260 O HOH C2064 1555 1555 2.54 LINK NA NA C1260 O HOH C2066 1555 1555 2.49 LINK NA NA C1260 O HOH C2069 1555 1555 2.27 SITE 1 AC1 15 GLY B 15 THR B 17 SER B 21 LEU B 22 SITE 2 AC1 15 GLN B 42 VAL B 67 ALA B 93 ILE B 94 SITE 3 AC1 15 ALA B 95 LEU B 145 THR B 146 LYS B 164 SITE 4 AC1 15 ALA B 190 HOH B2134 HOH B2135 SITE 1 AC2 30 GLY D 15 VAL D 16 THR D 17 SER D 21 SITE 2 AC2 30 LEU D 22 GLN D 42 ALA D 65 ASP D 66 SITE 3 AC2 30 VAL D 67 ALA D 93 ILE D 94 ALA D 95 SITE 4 AC2 30 VAL D 120 LEU D 145 THR D 146 LYS D 164 SITE 5 AC2 30 ALA D 190 GLY D 191 PRO D 192 VAL D 193 SITE 6 AC2 30 THR D 195 ALA D 197 ALA D 198 HOH D2008 SITE 7 AC2 30 HOH D2057 HOH D2084 HOH D2129 HOH D2130 SITE 8 AC2 30 HOH D2131 HOH D2132 SITE 1 AC3 5 GLU B 100 GLU B 103 HOH B2074 HOH B2075 SITE 2 AC3 5 HOH B2081 SITE 1 AC4 5 GLU A 100 GLU A 103 HOH A2087 HOH A2088 SITE 2 AC4 5 HOH A2093 SITE 1 AC5 5 GLU C 100 GLU C 103 HOH C2064 HOH C2066 SITE 2 AC5 5 HOH C2069 CRYST1 54.270 107.800 85.980 90.00 95.89 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018426 0.000000 0.001901 0.00000 SCALE2 0.000000 0.009276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011692 0.00000