data_2X04 # _entry.id 2X04 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2X04 PDBE EBI-41972 WWPDB D_1290041972 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1JGN unspecified 'SOLUTION STRUCTURE OF THE C-TERMINAL PABC DOMAIN OF HUMANPOLY(A)-BINDING PROTEIN IN COMPLEX WITH THE PEPTIDE FROMPAIP2' PDB 1JH4 unspecified 'SOLUTION STRUCTURE OF THE C-TERMINAL PABC DOMAIN OF HUMANPOLY(A)-BINDING PROTEIN IN COMPLEX WITH THE PEPTIDE FROMPAIP1' PDB 1G9L unspecified 'SOLUTION STRUCTURE OF THE PABC DOMAIN OF HUMAN POLY(A)BINDING PROTEIN' PDB 2DKL unspecified 'SOLUTION STRUCTURE OF THE UBA DOMAIN IN THE HUMANTRINUCLEOTIDE REPEAT CONTAINING 6C PROTEIN (HTNRC6C)' PDB 1CVJ unspecified 'X-RAY CRYSTAL STRUCTURE OF THE POLY(A)- BINDING PROTEIN INCOMPLEX WITH POLYADENYLATE RNA' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2X04 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2009-12-04 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jinek, M.' 1 'Fabian, M.R.' 2 'Coyle, S.M.' 3 'Sonenberg, N.' 4 'Doudna, J.A.' 5 # _citation.id primary _citation.title 'Structural Insights Into the Human Gw182-Pabc Interaction in Microrna-Mediated Deadenylation' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 17 _citation.page_first 238 _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20098421 _citation.pdbx_database_id_DOI 10.1038/NSMB.1768 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jinek, M.' 1 primary 'Fabian, M.R.' 2 primary 'Coyle, S.M.' 3 primary 'Sonenberg, N.' 4 primary 'Doudna, J.A.' 5 # _cell.entry_id 2X04 _cell.length_a 37.110 _cell.length_b 72.230 _cell.length_c 37.040 _cell.angle_alpha 90.00 _cell.angle_beta 119.76 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X04 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'POLYADENYLATE-BINDING PROTEIN 1' 8595.959 2 ? ? 'C-TERMINAL DOMAIN (PABC), RESIDUES 456-530' ? 2 polymer syn 'TRINUCLEOTIDE REPEAT-CONTAINING GENE 6C PROTEIN' 2091.368 2 ? ? 'DUF DOMAIN, RESIDUES 1382-1399' ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 217 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'POLY(A)-BINDING PROTEIN 1, PABP 1, POLYA BINDING PROTEIN PABP1' 2 TNRC6C # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GPLGSLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQA GPLGSLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQA A,B ? 2 'polypeptide(L)' no no SINWPPEFHPGVPWKGLQ SINWPPEFHPGVPWKGLQ C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 LEU n 1 7 THR n 1 8 ALA n 1 9 SER n 1 10 MET n 1 11 LEU n 1 12 ALA n 1 13 SER n 1 14 ALA n 1 15 PRO n 1 16 PRO n 1 17 GLN n 1 18 GLU n 1 19 GLN n 1 20 LYS n 1 21 GLN n 1 22 MET n 1 23 LEU n 1 24 GLY n 1 25 GLU n 1 26 ARG n 1 27 LEU n 1 28 PHE n 1 29 PRO n 1 30 LEU n 1 31 ILE n 1 32 GLN n 1 33 ALA n 1 34 MET n 1 35 HIS n 1 36 PRO n 1 37 THR n 1 38 LEU n 1 39 ALA n 1 40 GLY n 1 41 LYS n 1 42 ILE n 1 43 THR n 1 44 GLY n 1 45 MET n 1 46 LEU n 1 47 LEU n 1 48 GLU n 1 49 ILE n 1 50 ASP n 1 51 ASN n 1 52 SER n 1 53 GLU n 1 54 LEU n 1 55 LEU n 1 56 HIS n 1 57 MET n 1 58 LEU n 1 59 GLU n 1 60 SER n 1 61 PRO n 1 62 GLU n 1 63 SER n 1 64 LEU n 1 65 ARG n 1 66 SER n 1 67 LYS n 1 68 VAL n 1 69 ASP n 1 70 GLU n 1 71 ALA n 1 72 VAL n 1 73 ALA n 1 74 VAL n 1 75 LEU n 1 76 GLN n 1 77 ALA n 1 78 HIS n 1 79 GLN n 1 80 ALA n 2 1 SER n 2 2 ILE n 2 3 ASN n 2 4 TRP n 2 5 PRO n 2 6 PRO n 2 7 GLU n 2 8 PHE n 2 9 HIS n 2 10 PRO n 2 11 GLY n 2 12 VAL n 2 13 PRO n 2 14 TRP n 2 15 LYS n 2 16 GLY n 2 17 LEU n 2 18 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX6P1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HOMO SAPIENS' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP PABP1_HUMAN 1 ? ? P11940 ? 2 UNP TNR6C_HUMAN 2 ? ? Q9HCJ0 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2X04 A 6 ? 80 ? P11940 456 ? 530 ? 545 619 2 1 2X04 B 6 ? 80 ? P11940 456 ? 530 ? 545 619 3 2 2X04 C 1 ? 18 ? Q9HCJ0 1382 ? 1399 ? 1382 1399 4 2 2X04 D 1 ? 18 ? Q9HCJ0 1382 ? 1399 ? 1382 1399 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2X04 GLY A 1 ? UNP P11940 ? ? 'expression tag' 540 1 1 2X04 PRO A 2 ? UNP P11940 ? ? 'expression tag' 541 2 1 2X04 LEU A 3 ? UNP P11940 ? ? 'expression tag' 542 3 1 2X04 GLY A 4 ? UNP P11940 ? ? 'expression tag' 543 4 1 2X04 SER A 5 ? UNP P11940 ? ? 'expression tag' 544 5 2 2X04 GLY B 1 ? UNP P11940 ? ? 'expression tag' 540 6 2 2X04 PRO B 2 ? UNP P11940 ? ? 'expression tag' 541 7 2 2X04 LEU B 3 ? UNP P11940 ? ? 'expression tag' 542 8 2 2X04 GLY B 4 ? UNP P11940 ? ? 'expression tag' 543 9 2 2X04 SER B 5 ? UNP P11940 ? ? 'expression tag' 544 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2X04 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.90 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M NA-ACETATE PH 4.6, 200 MM AMMONIUM SULFATE, 30% (W/V) PEG 4000' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2009-07-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.999954 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength 0.999954 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2X04 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 29.400 _reflns.d_resolution_high 1.500 _reflns.number_obs 27112 _reflns.number_all ? _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.05000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.660 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.60 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.46000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.870 _reflns_shell.pdbx_redundancy 3.66 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2X04 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27601 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.38 _refine.ls_d_res_high 1.49 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.164 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.163 _refine.ls_R_factor_R_free 0.186 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 1385 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 19.60 _refine.aniso_B[1][1] 1.79950 _refine.aniso_B[2][2] -2.07370 _refine.aniso_B[3][3] -0.49310 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.29470 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.36 _refine.solvent_model_param_bsol 47.86 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values TWIN_LSQ_F _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error 20.910 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1414 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 217 _refine_hist.number_atoms_total 1641 _refine_hist.d_res_high 1.49 _refine_hist.d_res_low 29.38 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 1493 'X-RAY DIFFRACTION' ? f_angle_d 1.017 ? ? 2039 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.044 ? ? 583 'X-RAY DIFFRACTION' ? f_chiral_restr 0.060 ? ? 230 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 265 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.4900 1.5273 1837 0.2281 98.00 0.2534 . . 97 . . 'X-RAY DIFFRACTION' . 1.5273 1.5686 1858 0.2141 98.00 0.2679 . . 98 . . 'X-RAY DIFFRACTION' . 1.5686 1.6147 1899 0.2056 98.00 0.2195 . . 100 . . 'X-RAY DIFFRACTION' . 1.6147 1.6668 1845 0.1955 98.00 0.2398 . . 97 . . 'X-RAY DIFFRACTION' . 1.6668 1.7264 1868 0.1922 98.00 0.1662 . . 98 . . 'X-RAY DIFFRACTION' . 1.7264 1.7955 1858 0.1805 98.00 0.2112 . . 98 . . 'X-RAY DIFFRACTION' . 1.7955 1.8772 1886 0.1870 98.00 0.1682 . . 99 . . 'X-RAY DIFFRACTION' . 1.8772 1.9762 1869 0.1780 98.00 0.2275 . . 99 . . 'X-RAY DIFFRACTION' . 1.9762 2.1000 1872 0.1788 98.00 0.2258 . . 98 . . 'X-RAY DIFFRACTION' . 2.1000 2.2620 1866 0.1654 98.00 0.1733 . . 99 . . 'X-RAY DIFFRACTION' . 2.2620 2.4896 1907 0.1637 98.00 0.2016 . . 100 . . 'X-RAY DIFFRACTION' . 2.4896 2.8496 1860 0.1584 98.00 0.1838 . . 98 . . 'X-RAY DIFFRACTION' . 2.8496 3.5891 1887 0.1378 98.00 0.1788 . . 99 . . 'X-RAY DIFFRACTION' . 3.5891 29.3817 1908 0.1328 98.00 0.1413 . . 101 . . # _struct.entry_id 2X04 _struct.title 'Crystal structure of the PABC-TNRC6C complex' _struct.pdbx_descriptor 'POLYADENYLATE-BINDING PROTEIN 1, TRINUCLEOTIDE REPEAT-CONTAINING GENE 6C PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2X04 _struct_keywords.pdbx_keywords 'PEPTIDE/RNA BINDING PROTEIN' _struct_keywords.text ;PEPTIDE-RNA BINDING PROTEIN COMPLEX, RNA-MEDIATED GENE SILENCING, NUCLEUS, METHYLATION, SPLICEOSOME, TRANSLATION REGULATION, PROTEIN-PROTEIN COMPLEX, COILED COIL, DEADENYLATION, MRNA SPLICING, PHOSPHOPROTEIN, MRNA PROCESSING, MICRORNA SILENCING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 7 ? SER A 13 ? THR A 546 SER A 552 1 ? 7 HELX_P HELX_P2 2 PRO A 15 ? HIS A 35 ? PRO A 554 HIS A 574 1 ? 21 HELX_P HELX_P3 3 LEU A 38 ? LEU A 47 ? LEU A 577 LEU A 586 1 ? 10 HELX_P HELX_P4 4 ASP A 50 ? SER A 60 ? ASP A 589 SER A 599 1 ? 11 HELX_P HELX_P5 5 SER A 60 ? GLN A 76 ? SER A 599 GLN A 615 1 ? 17 HELX_P HELX_P6 6 THR B 7 ? ALA B 14 ? THR B 546 ALA B 553 1 ? 8 HELX_P HELX_P7 7 PRO B 15 ? HIS B 35 ? PRO B 554 HIS B 574 1 ? 21 HELX_P HELX_P8 8 LEU B 38 ? LEU B 47 ? LEU B 577 LEU B 586 1 ? 10 HELX_P HELX_P9 9 ASP B 50 ? SER B 60 ? ASP B 589 SER B 599 1 ? 11 HELX_P HELX_P10 10 SER B 60 ? GLN B 79 ? SER B 599 GLN B 618 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 4 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 1385 _struct_mon_prot_cis.auth_asym_id C _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 5 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 1386 _struct_mon_prot_cis.pdbx_auth_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.66 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE SO4 B 1619' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 B 1620' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 GLY B 4 ? GLY B 543 . ? 1_555 ? 2 AC1 2 HOH H . ? HOH B 2075 . ? 1_555 ? 3 AC2 7 SER B 9 ? SER B 548 . ? 1_655 ? 4 AC2 7 HIS B 35 ? HIS B 574 . ? 1_555 ? 5 AC2 7 PRO B 36 ? PRO B 575 . ? 1_555 ? 6 AC2 7 THR B 37 ? THR B 576 . ? 1_555 ? 7 AC2 7 LEU B 38 ? LEU B 577 . ? 1_555 ? 8 AC2 7 HOH H . ? HOH B 2019 . ? 1_655 ? 9 AC2 7 HOH H . ? HOH B 2071 . ? 1_555 ? # _database_PDB_matrix.entry_id 2X04 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2X04 _atom_sites.fract_transf_matrix[1][1] 0.026947 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.015408 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013845 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031099 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 540 540 GLY GLY A . n A 1 2 PRO 2 541 541 PRO PRO A . n A 1 3 LEU 3 542 542 LEU LEU A . n A 1 4 GLY 4 543 543 GLY GLY A . n A 1 5 SER 5 544 544 SER SER A . n A 1 6 LEU 6 545 545 LEU LEU A . n A 1 7 THR 7 546 546 THR THR A . n A 1 8 ALA 8 547 547 ALA ALA A . n A 1 9 SER 9 548 548 SER SER A . n A 1 10 MET 10 549 549 MET MET A . n A 1 11 LEU 11 550 550 LEU LEU A . n A 1 12 ALA 12 551 551 ALA ALA A . n A 1 13 SER 13 552 552 SER SER A . n A 1 14 ALA 14 553 553 ALA ALA A . n A 1 15 PRO 15 554 554 PRO PRO A . n A 1 16 PRO 16 555 555 PRO PRO A . n A 1 17 GLN 17 556 556 GLN GLN A . n A 1 18 GLU 18 557 557 GLU GLU A . n A 1 19 GLN 19 558 558 GLN GLN A . n A 1 20 LYS 20 559 559 LYS LYS A . n A 1 21 GLN 21 560 560 GLN GLN A . n A 1 22 MET 22 561 561 MET MET A . n A 1 23 LEU 23 562 562 LEU LEU A . n A 1 24 GLY 24 563 563 GLY GLY A . n A 1 25 GLU 25 564 564 GLU GLU A . n A 1 26 ARG 26 565 565 ARG ARG A . n A 1 27 LEU 27 566 566 LEU LEU A . n A 1 28 PHE 28 567 567 PHE PHE A . n A 1 29 PRO 29 568 568 PRO PRO A . n A 1 30 LEU 30 569 569 LEU LEU A . n A 1 31 ILE 31 570 570 ILE ILE A . n A 1 32 GLN 32 571 571 GLN GLN A . n A 1 33 ALA 33 572 572 ALA ALA A . n A 1 34 MET 34 573 573 MET MET A . n A 1 35 HIS 35 574 574 HIS HIS A . n A 1 36 PRO 36 575 575 PRO PRO A . n A 1 37 THR 37 576 576 THR THR A . n A 1 38 LEU 38 577 577 LEU LEU A . n A 1 39 ALA 39 578 578 ALA ALA A . n A 1 40 GLY 40 579 579 GLY GLY A . n A 1 41 LYS 41 580 580 LYS LYS A . n A 1 42 ILE 42 581 581 ILE ILE A . n A 1 43 THR 43 582 582 THR THR A . n A 1 44 GLY 44 583 583 GLY GLY A . n A 1 45 MET 45 584 584 MET MET A . n A 1 46 LEU 46 585 585 LEU LEU A . n A 1 47 LEU 47 586 586 LEU LEU A . n A 1 48 GLU 48 587 587 GLU GLU A . n A 1 49 ILE 49 588 588 ILE ILE A . n A 1 50 ASP 50 589 589 ASP ASP A . n A 1 51 ASN 51 590 590 ASN ASN A . n A 1 52 SER 52 591 591 SER SER A . n A 1 53 GLU 53 592 592 GLU GLU A . n A 1 54 LEU 54 593 593 LEU LEU A . n A 1 55 LEU 55 594 594 LEU LEU A . n A 1 56 HIS 56 595 595 HIS HIS A . n A 1 57 MET 57 596 596 MET MET A . n A 1 58 LEU 58 597 597 LEU LEU A . n A 1 59 GLU 59 598 598 GLU GLU A . n A 1 60 SER 60 599 599 SER SER A . n A 1 61 PRO 61 600 600 PRO PRO A . n A 1 62 GLU 62 601 601 GLU GLU A . n A 1 63 SER 63 602 602 SER SER A . n A 1 64 LEU 64 603 603 LEU LEU A . n A 1 65 ARG 65 604 604 ARG ARG A . n A 1 66 SER 66 605 605 SER SER A . n A 1 67 LYS 67 606 606 LYS LYS A . n A 1 68 VAL 68 607 607 VAL VAL A . n A 1 69 ASP 69 608 608 ASP ASP A . n A 1 70 GLU 70 609 609 GLU GLU A . n A 1 71 ALA 71 610 610 ALA ALA A . n A 1 72 VAL 72 611 611 VAL VAL A . n A 1 73 ALA 73 612 612 ALA ALA A . n A 1 74 VAL 74 613 613 VAL VAL A . n A 1 75 LEU 75 614 614 LEU LEU A . n A 1 76 GLN 76 615 615 GLN GLN A . n A 1 77 ALA 77 616 616 ALA ALA A . n A 1 78 HIS 78 617 ? ? ? A . n A 1 79 GLN 79 618 ? ? ? A . n A 1 80 ALA 80 619 ? ? ? A . n B 1 1 GLY 1 540 540 GLY GLY B . n B 1 2 PRO 2 541 541 PRO PRO B . n B 1 3 LEU 3 542 542 LEU LEU B . n B 1 4 GLY 4 543 543 GLY GLY B . n B 1 5 SER 5 544 544 SER SER B . n B 1 6 LEU 6 545 545 LEU LEU B . n B 1 7 THR 7 546 546 THR THR B . n B 1 8 ALA 8 547 547 ALA ALA B . n B 1 9 SER 9 548 548 SER SER B . n B 1 10 MET 10 549 549 MET MET B . n B 1 11 LEU 11 550 550 LEU LEU B . n B 1 12 ALA 12 551 551 ALA ALA B . n B 1 13 SER 13 552 552 SER SER B . n B 1 14 ALA 14 553 553 ALA ALA B . n B 1 15 PRO 15 554 554 PRO PRO B . n B 1 16 PRO 16 555 555 PRO PRO B . n B 1 17 GLN 17 556 556 GLN GLN B . n B 1 18 GLU 18 557 557 GLU GLU B . n B 1 19 GLN 19 558 558 GLN GLN B . n B 1 20 LYS 20 559 559 LYS LYS B . n B 1 21 GLN 21 560 560 GLN GLN B . n B 1 22 MET 22 561 561 MET MET B . n B 1 23 LEU 23 562 562 LEU LEU B . n B 1 24 GLY 24 563 563 GLY GLY B . n B 1 25 GLU 25 564 564 GLU GLU B . n B 1 26 ARG 26 565 565 ARG ARG B . n B 1 27 LEU 27 566 566 LEU LEU B . n B 1 28 PHE 28 567 567 PHE PHE B . n B 1 29 PRO 29 568 568 PRO PRO B . n B 1 30 LEU 30 569 569 LEU LEU B . n B 1 31 ILE 31 570 570 ILE ILE B . n B 1 32 GLN 32 571 571 GLN GLN B . n B 1 33 ALA 33 572 572 ALA ALA B . n B 1 34 MET 34 573 573 MET MET B . n B 1 35 HIS 35 574 574 HIS HIS B . n B 1 36 PRO 36 575 575 PRO PRO B . n B 1 37 THR 37 576 576 THR THR B . n B 1 38 LEU 38 577 577 LEU LEU B . n B 1 39 ALA 39 578 578 ALA ALA B . n B 1 40 GLY 40 579 579 GLY GLY B . n B 1 41 LYS 41 580 580 LYS LYS B . n B 1 42 ILE 42 581 581 ILE ILE B . n B 1 43 THR 43 582 582 THR THR B . n B 1 44 GLY 44 583 583 GLY GLY B . n B 1 45 MET 45 584 584 MET MET B . n B 1 46 LEU 46 585 585 LEU LEU B . n B 1 47 LEU 47 586 586 LEU LEU B . n B 1 48 GLU 48 587 587 GLU GLU B . n B 1 49 ILE 49 588 588 ILE ILE B . n B 1 50 ASP 50 589 589 ASP ASP B . n B 1 51 ASN 51 590 590 ASN ASN B . n B 1 52 SER 52 591 591 SER SER B . n B 1 53 GLU 53 592 592 GLU GLU B . n B 1 54 LEU 54 593 593 LEU LEU B . n B 1 55 LEU 55 594 594 LEU LEU B . n B 1 56 HIS 56 595 595 HIS HIS B . n B 1 57 MET 57 596 596 MET MET B . n B 1 58 LEU 58 597 597 LEU LEU B . n B 1 59 GLU 59 598 598 GLU GLU B . n B 1 60 SER 60 599 599 SER SER B . n B 1 61 PRO 61 600 600 PRO PRO B . n B 1 62 GLU 62 601 601 GLU GLU B . n B 1 63 SER 63 602 602 SER SER B . n B 1 64 LEU 64 603 603 LEU LEU B . n B 1 65 ARG 65 604 604 ARG ARG B . n B 1 66 SER 66 605 605 SER SER B . n B 1 67 LYS 67 606 606 LYS LYS B . n B 1 68 VAL 68 607 607 VAL VAL B . n B 1 69 ASP 69 608 608 ASP ASP B . n B 1 70 GLU 70 609 609 GLU GLU B . n B 1 71 ALA 71 610 610 ALA ALA B . n B 1 72 VAL 72 611 611 VAL VAL B . n B 1 73 ALA 73 612 612 ALA ALA B . n B 1 74 VAL 74 613 613 VAL VAL B . n B 1 75 LEU 75 614 614 LEU LEU B . n B 1 76 GLN 76 615 615 GLN GLN B . n B 1 77 ALA 77 616 616 ALA ALA B . n B 1 78 HIS 78 617 617 HIS HIS B . n B 1 79 GLN 79 618 618 GLN GLN B . n B 1 80 ALA 80 619 ? ? ? B . n C 2 1 SER 1 1382 ? ? ? C . n C 2 2 ILE 2 1383 ? ? ? C . n C 2 3 ASN 3 1384 ? ? ? C . n C 2 4 TRP 4 1385 1385 TRP TRP C . n C 2 5 PRO 5 1386 1386 PRO PRO C . n C 2 6 PRO 6 1387 1387 PRO PRO C . n C 2 7 GLU 7 1388 1388 GLU GLU C . n C 2 8 PHE 8 1389 1389 PHE PHE C . n C 2 9 HIS 9 1390 1390 HIS HIS C . n C 2 10 PRO 10 1391 1391 PRO PRO C . n C 2 11 GLY 11 1392 1392 GLY GLY C . n C 2 12 VAL 12 1393 1393 VAL VAL C . n C 2 13 PRO 13 1394 1394 PRO PRO C . n C 2 14 TRP 14 1395 1395 TRP TRP C . n C 2 15 LYS 15 1396 1396 LYS LYS C . n C 2 16 GLY 16 1397 1397 GLY GLY C . n C 2 17 LEU 17 1398 1398 LEU LEU C . n C 2 18 GLN 18 1399 1399 GLN GLN C . n D 2 1 SER 1 1382 ? ? ? D . n D 2 2 ILE 2 1383 ? ? ? D . n D 2 3 ASN 3 1384 ? ? ? D . n D 2 4 TRP 4 1385 1385 TRP TRP D . n D 2 5 PRO 5 1386 1386 PRO PRO D . n D 2 6 PRO 6 1387 1387 PRO PRO D . n D 2 7 GLU 7 1388 1388 GLU GLU D . n D 2 8 PHE 8 1389 1389 PHE PHE D . n D 2 9 HIS 9 1390 1390 HIS HIS D . n D 2 10 PRO 10 1391 1391 PRO PRO D . n D 2 11 GLY 11 1392 1392 GLY GLY D . n D 2 12 VAL 12 1393 1393 VAL VAL D . n D 2 13 PRO 13 1394 1394 PRO PRO D . n D 2 14 TRP 14 1395 1395 TRP TRP D . n D 2 15 LYS 15 1396 1396 LYS LYS D . n D 2 16 GLY 16 1397 1397 GLY GLY D . n D 2 17 LEU 17 1398 1398 LEU LEU D . n D 2 18 GLN 18 1399 1399 GLN GLN D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 1 1619 1619 SO4 SO4 B . F 3 SO4 1 1620 1620 SO4 SO4 B . G 4 HOH 1 2001 2001 HOH HOH A . G 4 HOH 2 2002 2002 HOH HOH A . G 4 HOH 3 2003 2003 HOH HOH A . G 4 HOH 4 2004 2004 HOH HOH A . G 4 HOH 5 2005 2005 HOH HOH A . G 4 HOH 6 2006 2006 HOH HOH A . G 4 HOH 7 2007 2007 HOH HOH A . G 4 HOH 8 2008 2008 HOH HOH A . G 4 HOH 9 2009 2009 HOH HOH A . G 4 HOH 10 2010 2010 HOH HOH A . G 4 HOH 11 2011 2011 HOH HOH A . G 4 HOH 12 2012 2012 HOH HOH A . G 4 HOH 13 2013 2013 HOH HOH A . G 4 HOH 14 2014 2014 HOH HOH A . G 4 HOH 15 2015 2015 HOH HOH A . G 4 HOH 16 2016 2016 HOH HOH A . G 4 HOH 17 2017 2017 HOH HOH A . G 4 HOH 18 2018 2018 HOH HOH A . G 4 HOH 19 2019 2019 HOH HOH A . G 4 HOH 20 2020 2020 HOH HOH A . G 4 HOH 21 2021 2021 HOH HOH A . G 4 HOH 22 2022 2022 HOH HOH A . G 4 HOH 23 2023 2023 HOH HOH A . G 4 HOH 24 2024 2024 HOH HOH A . G 4 HOH 25 2025 2025 HOH HOH A . G 4 HOH 26 2026 2026 HOH HOH A . G 4 HOH 27 2027 2027 HOH HOH A . G 4 HOH 28 2028 2028 HOH HOH A . G 4 HOH 29 2029 2029 HOH HOH A . G 4 HOH 30 2030 2030 HOH HOH A . G 4 HOH 31 2031 2031 HOH HOH A . G 4 HOH 32 2032 2032 HOH HOH A . G 4 HOH 33 2033 2033 HOH HOH A . G 4 HOH 34 2034 2034 HOH HOH A . G 4 HOH 35 2035 2035 HOH HOH A . G 4 HOH 36 2036 2036 HOH HOH A . G 4 HOH 37 2037 2037 HOH HOH A . G 4 HOH 38 2038 2038 HOH HOH A . G 4 HOH 39 2039 2039 HOH HOH A . G 4 HOH 40 2040 2040 HOH HOH A . G 4 HOH 41 2041 2041 HOH HOH A . G 4 HOH 42 2042 2042 HOH HOH A . G 4 HOH 43 2043 2043 HOH HOH A . G 4 HOH 44 2044 2044 HOH HOH A . G 4 HOH 45 2045 2045 HOH HOH A . G 4 HOH 46 2046 2046 HOH HOH A . G 4 HOH 47 2047 2047 HOH HOH A . G 4 HOH 48 2048 2048 HOH HOH A . G 4 HOH 49 2049 2049 HOH HOH A . G 4 HOH 50 2050 2050 HOH HOH A . G 4 HOH 51 2051 2051 HOH HOH A . G 4 HOH 52 2052 2052 HOH HOH A . G 4 HOH 53 2053 2053 HOH HOH A . G 4 HOH 54 2054 2054 HOH HOH A . G 4 HOH 55 2055 2055 HOH HOH A . G 4 HOH 56 2056 2056 HOH HOH A . G 4 HOH 57 2057 2057 HOH HOH A . G 4 HOH 58 2058 2058 HOH HOH A . G 4 HOH 59 2059 2059 HOH HOH A . G 4 HOH 60 2060 2060 HOH HOH A . G 4 HOH 61 2061 2061 HOH HOH A . G 4 HOH 62 2062 2062 HOH HOH A . G 4 HOH 63 2063 2063 HOH HOH A . G 4 HOH 64 2064 2064 HOH HOH A . G 4 HOH 65 2065 2065 HOH HOH A . G 4 HOH 66 2066 2066 HOH HOH A . G 4 HOH 67 2067 2067 HOH HOH A . G 4 HOH 68 2068 2068 HOH HOH A . G 4 HOH 69 2069 2069 HOH HOH A . G 4 HOH 70 2070 2070 HOH HOH A . G 4 HOH 71 2071 2071 HOH HOH A . G 4 HOH 72 2072 2072 HOH HOH A . G 4 HOH 73 2073 2073 HOH HOH A . G 4 HOH 74 2074 2074 HOH HOH A . G 4 HOH 75 2075 2075 HOH HOH A . G 4 HOH 76 2076 2076 HOH HOH A . G 4 HOH 77 2077 2077 HOH HOH A . G 4 HOH 78 2078 2078 HOH HOH A . G 4 HOH 79 2079 2079 HOH HOH A . G 4 HOH 80 2080 2080 HOH HOH A . G 4 HOH 81 2081 2081 HOH HOH A . G 4 HOH 82 2082 2082 HOH HOH A . G 4 HOH 83 2083 2083 HOH HOH A . G 4 HOH 84 2084 2084 HOH HOH A . G 4 HOH 85 2085 2085 HOH HOH A . G 4 HOH 86 2086 2086 HOH HOH A . G 4 HOH 87 2087 2087 HOH HOH A . G 4 HOH 88 2088 2088 HOH HOH A . G 4 HOH 89 2089 2089 HOH HOH A . G 4 HOH 90 2090 2090 HOH HOH A . G 4 HOH 91 2091 2091 HOH HOH A . H 4 HOH 1 2001 2001 HOH HOH B . H 4 HOH 2 2002 2002 HOH HOH B . H 4 HOH 3 2003 2003 HOH HOH B . H 4 HOH 4 2004 2004 HOH HOH B . H 4 HOH 5 2005 2005 HOH HOH B . H 4 HOH 6 2006 2006 HOH HOH B . H 4 HOH 7 2007 2007 HOH HOH B . H 4 HOH 8 2008 2008 HOH HOH B . H 4 HOH 9 2009 2009 HOH HOH B . H 4 HOH 10 2010 2010 HOH HOH B . H 4 HOH 11 2011 2011 HOH HOH B . H 4 HOH 12 2012 2012 HOH HOH B . H 4 HOH 13 2013 2013 HOH HOH B . H 4 HOH 14 2014 2014 HOH HOH B . H 4 HOH 15 2015 2015 HOH HOH B . H 4 HOH 16 2016 2016 HOH HOH B . H 4 HOH 17 2017 2017 HOH HOH B . H 4 HOH 18 2018 2018 HOH HOH B . H 4 HOH 19 2019 2019 HOH HOH B . H 4 HOH 20 2020 2020 HOH HOH B . H 4 HOH 21 2021 2021 HOH HOH B . H 4 HOH 22 2022 2022 HOH HOH B . H 4 HOH 23 2023 2023 HOH HOH B . H 4 HOH 24 2024 2024 HOH HOH B . H 4 HOH 25 2025 2025 HOH HOH B . H 4 HOH 26 2026 2026 HOH HOH B . H 4 HOH 27 2027 2027 HOH HOH B . H 4 HOH 28 2028 2028 HOH HOH B . H 4 HOH 29 2029 2029 HOH HOH B . H 4 HOH 30 2030 2030 HOH HOH B . H 4 HOH 31 2031 2031 HOH HOH B . H 4 HOH 32 2032 2032 HOH HOH B . H 4 HOH 33 2033 2033 HOH HOH B . H 4 HOH 34 2034 2034 HOH HOH B . H 4 HOH 35 2035 2035 HOH HOH B . H 4 HOH 36 2036 2036 HOH HOH B . H 4 HOH 37 2037 2037 HOH HOH B . H 4 HOH 38 2038 2038 HOH HOH B . H 4 HOH 39 2039 2039 HOH HOH B . H 4 HOH 40 2040 2040 HOH HOH B . H 4 HOH 41 2041 2041 HOH HOH B . H 4 HOH 42 2042 2042 HOH HOH B . H 4 HOH 43 2043 2043 HOH HOH B . H 4 HOH 44 2044 2044 HOH HOH B . H 4 HOH 45 2045 2045 HOH HOH B . H 4 HOH 46 2046 2046 HOH HOH B . H 4 HOH 47 2047 2047 HOH HOH B . H 4 HOH 48 2048 2048 HOH HOH B . H 4 HOH 49 2049 2049 HOH HOH B . H 4 HOH 50 2050 2050 HOH HOH B . H 4 HOH 51 2051 2051 HOH HOH B . H 4 HOH 52 2052 2052 HOH HOH B . H 4 HOH 53 2053 2053 HOH HOH B . H 4 HOH 54 2054 2054 HOH HOH B . H 4 HOH 55 2055 2055 HOH HOH B . H 4 HOH 56 2056 2056 HOH HOH B . H 4 HOH 57 2057 2057 HOH HOH B . H 4 HOH 58 2058 2058 HOH HOH B . H 4 HOH 59 2059 2059 HOH HOH B . H 4 HOH 60 2060 2060 HOH HOH B . H 4 HOH 61 2061 2061 HOH HOH B . H 4 HOH 62 2062 2062 HOH HOH B . H 4 HOH 63 2063 2063 HOH HOH B . H 4 HOH 64 2064 2064 HOH HOH B . H 4 HOH 65 2065 2065 HOH HOH B . H 4 HOH 66 2066 2066 HOH HOH B . H 4 HOH 67 2067 2067 HOH HOH B . H 4 HOH 68 2068 2068 HOH HOH B . H 4 HOH 69 2069 2069 HOH HOH B . H 4 HOH 70 2070 2070 HOH HOH B . H 4 HOH 71 2071 2071 HOH HOH B . H 4 HOH 72 2072 2072 HOH HOH B . H 4 HOH 73 2073 2073 HOH HOH B . H 4 HOH 74 2074 2074 HOH HOH B . H 4 HOH 75 2075 2075 HOH HOH B . I 4 HOH 1 2001 2001 HOH HOH C . I 4 HOH 2 2002 2002 HOH HOH C . I 4 HOH 3 2003 2003 HOH HOH C . I 4 HOH 4 2004 2004 HOH HOH C . I 4 HOH 5 2005 2005 HOH HOH C . I 4 HOH 6 2006 2006 HOH HOH C . I 4 HOH 7 2007 2007 HOH HOH C . I 4 HOH 8 2008 2008 HOH HOH C . I 4 HOH 9 2009 2009 HOH HOH C . I 4 HOH 10 2010 2010 HOH HOH C . I 4 HOH 11 2011 2011 HOH HOH C . I 4 HOH 12 2012 2012 HOH HOH C . I 4 HOH 13 2013 2013 HOH HOH C . I 4 HOH 14 2014 2014 HOH HOH C . I 4 HOH 15 2015 2015 HOH HOH C . I 4 HOH 16 2016 2016 HOH HOH C . I 4 HOH 17 2017 2017 HOH HOH C . I 4 HOH 18 2018 2018 HOH HOH C . I 4 HOH 19 2019 2019 HOH HOH C . I 4 HOH 20 2020 2020 HOH HOH C . I 4 HOH 21 2021 2021 HOH HOH C . I 4 HOH 22 2022 2022 HOH HOH C . I 4 HOH 23 2023 2023 HOH HOH C . I 4 HOH 24 2024 2024 HOH HOH C . I 4 HOH 25 2025 2025 HOH HOH C . I 4 HOH 26 2026 2026 HOH HOH C . I 4 HOH 27 2027 2027 HOH HOH C . J 4 HOH 1 2001 2001 HOH HOH D . J 4 HOH 2 2002 2002 HOH HOH D . J 4 HOH 3 2003 2003 HOH HOH D . J 4 HOH 4 2004 2004 HOH HOH D . J 4 HOH 5 2005 2005 HOH HOH D . J 4 HOH 6 2006 2006 HOH HOH D . J 4 HOH 7 2007 2007 HOH HOH D . J 4 HOH 8 2008 2008 HOH HOH D . J 4 HOH 9 2009 2009 HOH HOH D . J 4 HOH 10 2010 2010 HOH HOH D . J 4 HOH 11 2011 2011 HOH HOH D . J 4 HOH 12 2012 2012 HOH HOH D . J 4 HOH 13 2013 2013 HOH HOH D . J 4 HOH 14 2014 2014 HOH HOH D . J 4 HOH 15 2015 2015 HOH HOH D . J 4 HOH 16 2016 2016 HOH HOH D . J 4 HOH 17 2017 2017 HOH HOH D . J 4 HOH 18 2018 2018 HOH HOH D . J 4 HOH 19 2019 2019 HOH HOH D . J 4 HOH 20 2020 2020 HOH HOH D . J 4 HOH 21 2021 2021 HOH HOH D . J 4 HOH 22 2022 2022 HOH HOH D . J 4 HOH 23 2023 2023 HOH HOH D . J 4 HOH 24 2024 2024 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 B,D,E,F,H,J 2 1 A,C,G,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1300 ? 1 MORE -22.8 ? 1 'SSA (A^2)' 5510 ? 2 'ABSA (A^2)' 1290 ? 2 MORE -21.3 ? 2 'SSA (A^2)' 5440 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-19 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 PHENIX phasing . ? 4 # _pdbx_entry_details.entry_id 2X04 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE GPLGS AT THE N-TERMINUS IS DERIVED FROM THE EXPRESSION VECTOR ; # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id D _pdbx_validate_torsion.auth_seq_id 1398 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -169.12 _pdbx_validate_torsion.psi 115.02 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2011 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.15 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D TRP 1385 ? CG ? D TRP 4 CG 2 1 Y 1 D TRP 1385 ? CD1 ? D TRP 4 CD1 3 1 Y 1 D TRP 1385 ? CD2 ? D TRP 4 CD2 4 1 Y 1 D TRP 1385 ? NE1 ? D TRP 4 NE1 5 1 Y 1 D TRP 1385 ? CE2 ? D TRP 4 CE2 6 1 Y 1 D TRP 1385 ? CE3 ? D TRP 4 CE3 7 1 Y 1 D TRP 1385 ? CZ2 ? D TRP 4 CZ2 8 1 Y 1 D TRP 1385 ? CZ3 ? D TRP 4 CZ3 9 1 Y 1 D TRP 1385 ? CH2 ? D TRP 4 CH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 617 ? A HIS 78 2 1 Y 1 A GLN 618 ? A GLN 79 3 1 Y 1 A ALA 619 ? A ALA 80 4 1 Y 1 B ALA 619 ? B ALA 80 5 1 Y 1 C SER 1382 ? C SER 1 6 1 Y 1 C ILE 1383 ? C ILE 2 7 1 Y 1 C ASN 1384 ? C ASN 3 8 1 Y 1 D SER 1382 ? D SER 1 9 1 Y 1 D ILE 1383 ? D ILE 2 10 1 Y 1 D ASN 1384 ? D ASN 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # _pdbx_reflns_twin.domain_id 1 _pdbx_reflns_twin.crystal_id 1 _pdbx_reflns_twin.diffrn_id 1 _pdbx_reflns_twin.type ? _pdbx_reflns_twin.operator L,-K,H _pdbx_reflns_twin.fraction 0.1230 #