HEADER TRANSFERASE 08-DEC-09 2X0E TITLE COMPLEX STRUCTURE OF WSAF WITH DTDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: WSAF; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RHAMNOSYLTRANSFERASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 STRAIN: 2004/3A; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GT4 FAMILY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.STEINER,G.HAGELUEKEN,J.H.NAISMITH REVDAT 4 20-DEC-23 2X0E 1 REMARK REVDAT 3 06-MAR-19 2X0E 1 REMARK REVDAT 2 16-MAR-10 2X0E 1 JRNL REMARK REVDAT 1 02-FEB-10 2X0E 0 JRNL AUTH K.STEINER,G.HAGELUEKEN,P.MESSNER,C.SCHAEFFER,J.H.NAISMITH JRNL TITL STRUCTURAL BASIS OF SUBSTRATE BINDING IN WSAF, A JRNL TITL 2 RHAMNOSYLTRANSFERASE FROM GEOBACILLUS STEAROTHERMOPHILUS. JRNL REF J.MOL.BIOL. V. 397 436 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20097205 JRNL DOI 10.1016/J.JMB.2010.01.035 REMARK 2 REMARK 2 RESOLUTION. 2.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 38728 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6299 - 6.0476 0.96 3718 195 0.1649 0.2182 REMARK 3 2 6.0476 - 4.8068 0.99 3817 210 0.1443 0.2105 REMARK 3 3 4.8068 - 4.2011 0.99 3822 188 0.1379 0.1969 REMARK 3 4 4.2011 - 3.8179 0.99 3799 217 0.1515 0.2231 REMARK 3 5 3.8179 - 3.5447 0.99 3825 215 0.1694 0.2306 REMARK 3 6 3.5447 - 3.3360 0.99 3836 224 0.1892 0.2754 REMARK 3 7 3.3360 - 3.1691 0.99 3827 195 0.2052 0.2284 REMARK 3 8 3.1691 - 3.0313 0.99 3758 229 0.2277 0.2971 REMARK 3 9 3.0313 - 2.9147 0.92 3597 160 0.2529 0.3368 REMARK 3 10 2.9147 - 2.8142 0.72 2758 138 0.2626 0.3308 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 14.43 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.07030 REMARK 3 B22 (A**2) : 9.01520 REMARK 3 B33 (A**2) : -0.94490 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.00780 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6417 REMARK 3 ANGLE : 0.809 8688 REMARK 3 CHIRALITY : 0.057 935 REMARK 3 PLANARITY : 0.002 1097 REMARK 3 DIHEDRAL : 16.764 2356 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -16.4494 4.8972 -6.1706 REMARK 3 T TENSOR REMARK 3 T11: 0.0220 T22: 0.0676 REMARK 3 T33: 0.0196 T12: -0.0112 REMARK 3 T13: 0.0106 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.5570 L22: 0.4185 REMARK 3 L33: 0.8520 L12: -0.1232 REMARK 3 L13: -0.0859 L23: -0.0430 REMARK 3 S TENSOR REMARK 3 S11: 0.0067 S12: 0.1674 S13: -0.0433 REMARK 3 S21: -0.0199 S22: -0.0216 S23: 0.0190 REMARK 3 S31: -0.0243 S32: -0.0799 S33: 0.0208 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -13.9666 6.9036 28.3661 REMARK 3 T TENSOR REMARK 3 T11: 0.0678 T22: 0.1353 REMARK 3 T33: 0.0109 T12: 0.0318 REMARK 3 T13: -0.0141 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 1.4041 L22: 0.2117 REMARK 3 L33: 0.3942 L12: 0.1652 REMARK 3 L13: 0.1965 L23: -0.2391 REMARK 3 S TENSOR REMARK 3 S11: 0.0287 S12: -0.4262 S13: -0.0431 REMARK 3 S21: 0.0754 S22: -0.0299 S23: -0.0232 REMARK 3 S31: -0.0418 S32: 0.0152 S33: 0.0088 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 28:381 OR RESSEQ REMARK 3 389:398 OR RESSEQ 402:413 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 28:381 OR RESSEQ REMARK 3 389:398 OR RESSEQ 402:413 ) REMARK 3 ATOM PAIRS NUMBER : 3087 REMARK 3 RMSD : 0.037 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2X0E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1290042034. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU-MSC SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38750 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.810 REMARK 200 RESOLUTION RANGE LOW (A) : 29.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.550 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.50 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.550 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2X0D REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 MM MG FORMATE, 20% PEG3350, 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.78000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 78 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 79 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LYS 81 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LYS 78 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LYS 79 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, LYS 81 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 GLN A 3 REMARK 465 LYS A 4 REMARK 465 LEU A 5 REMARK 465 ILE A 6 REMARK 465 GLN A 7 REMARK 465 ILE A 8 REMARK 465 LEU A 9 REMARK 465 ARG A 10 REMARK 465 ARG A 11 REMARK 465 ASN A 12 REMARK 465 GLU A 13 REMARK 465 TYR A 14 REMARK 465 VAL A 15 REMARK 465 LYS A 16 REMARK 465 ASN A 17 REMARK 465 VAL A 18 REMARK 465 TYR A 19 REMARK 465 LYS A 20 REMARK 465 ASN A 21 REMARK 465 THR A 22 REMARK 465 VAL A 23 REMARK 465 SER A 24 REMARK 465 ASN A 25 REMARK 465 PHE A 26 REMARK 465 ILE A 27 REMARK 465 ASN A 382 REMARK 465 ARG A 383 REMARK 465 ASP A 384 REMARK 465 VAL A 385 REMARK 465 ASP A 386 REMARK 465 LYS A 387 REMARK 465 LYS A 388 REMARK 465 GLU A 399 REMARK 465 PHE A 400 REMARK 465 ASN A 401 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 GLN B 3 REMARK 465 LYS B 4 REMARK 465 LEU B 5 REMARK 465 ILE B 6 REMARK 465 GLN B 7 REMARK 465 ILE B 8 REMARK 465 LEU B 9 REMARK 465 ARG B 10 REMARK 465 ARG B 11 REMARK 465 ASN B 12 REMARK 465 GLU B 13 REMARK 465 TYR B 14 REMARK 465 VAL B 15 REMARK 465 LYS B 16 REMARK 465 ASN B 17 REMARK 465 VAL B 18 REMARK 465 TYR B 19 REMARK 465 LYS B 20 REMARK 465 ASN B 21 REMARK 465 THR B 22 REMARK 465 VAL B 23 REMARK 465 SER B 24 REMARK 465 ASN B 25 REMARK 465 ASN B 382 REMARK 465 ARG B 383 REMARK 465 ASP B 384 REMARK 465 VAL B 385 REMARK 465 ASP B 386 REMARK 465 LYS B 387 REMARK 465 LYS B 388 REMARK 465 GLU B 399 REMARK 465 PHE B 400 REMARK 465 ASN B 401 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 398 O HOH B 2049 1.81 REMARK 500 OH TYR A 329 O HOH A 2049 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 40 CD - NE - CZ ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG A 40 NE - CZ - NH1 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG A 40 NE - CZ - NH2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 314 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 314 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 40 CD - NE - CZ ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG B 40 NE - CZ - NH1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG B 40 NE - CZ - NH2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG B 314 NE - CZ - NH1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG B 314 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 76 99.60 -46.16 REMARK 500 ASP A 112 38.67 -92.87 REMARK 500 THR A 139 -83.75 -128.03 REMARK 500 SER A 180 179.11 179.12 REMARK 500 SER A 202 151.47 85.27 REMARK 500 SER A 324 149.98 178.05 REMARK 500 GLU A 347 -112.53 49.09 REMARK 500 ILE A 397 70.11 -108.99 REMARK 500 PHE A 403 50.13 -92.13 REMARK 500 ASP B 76 100.22 -46.33 REMARK 500 ASP B 112 38.02 -92.51 REMARK 500 THR B 139 -83.29 -128.27 REMARK 500 SER B 180 179.30 179.62 REMARK 500 SER B 202 151.67 85.50 REMARK 500 SER B 324 150.99 179.13 REMARK 500 GLU B 347 -113.24 48.55 REMARK 500 ILE B 397 70.01 -108.86 REMARK 500 PHE B 403 50.15 -91.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TYD A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TYD B 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 415 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X0D RELATED DB: PDB REMARK 900 APO STRUCTURE OF WSAF REMARK 900 RELATED ID: 2X0F RELATED DB: PDB REMARK 900 STRUCTURE OF WSAF IN COMPLEX WITH DTDP-BETA-L-RHA DBREF 2X0E A 1 413 UNP Q7BG50 Q7BG50_BACST 1 413 DBREF 2X0E B 1 413 UNP Q7BG50 Q7BG50_BACST 1 413 SEQADV 2X0E ALA A 78 UNP Q7BG50 LYS 78 ENGINEERED MUTATION SEQADV 2X0E ALA A 79 UNP Q7BG50 LYS 79 ENGINEERED MUTATION SEQADV 2X0E ALA A 81 UNP Q7BG50 LYS 81 ENGINEERED MUTATION SEQADV 2X0E ALA B 78 UNP Q7BG50 LYS 78 ENGINEERED MUTATION SEQADV 2X0E ALA B 79 UNP Q7BG50 LYS 79 ENGINEERED MUTATION SEQADV 2X0E ALA B 81 UNP Q7BG50 LYS 81 ENGINEERED MUTATION SEQRES 1 A 413 MET LEU GLN LYS LEU ILE GLN ILE LEU ARG ARG ASN GLU SEQRES 2 A 413 TYR VAL LYS ASN VAL TYR LYS ASN THR VAL SER ASN PHE SEQRES 3 A 413 ILE GLU THR SER ILE PRO GLU ILE THR PRO PHE ASN ALA SEQRES 4 A 413 ARG THR SER SER ILE LYS GLY LYS ARG LEU ASN LEU LEU SEQRES 5 A 413 VAL PRO SER ILE ASN GLN GLU HIS MET PHE GLY GLY ILE SEQRES 6 A 413 SER THR ALA LEU LYS LEU PHE GLU GLN PHE ASP ASN ALA SEQRES 7 A 413 ALA PHE ALA LYS ARG ILE ILE LEU THR ASP ALA THR PRO SEQRES 8 A 413 ASN PRO LYS ASP LEU GLN SER PHE LYS SER PHE LYS TYR SEQRES 9 A 413 VAL MET PRO GLU GLU ASP LYS ASP PHE ALA LEU GLN ILE SEQRES 10 A 413 VAL PRO PHE ASN ASP ARG TYR ASN ARG THR ILE PRO VAL SEQRES 11 A 413 ALA LYS HIS ASP ILE PHE ILE ALA THR ALA TRP TRP THR SEQRES 12 A 413 ALA TYR ALA ALA GLN ARG ILE VAL SER TRP GLN SER ASP SEQRES 13 A 413 THR TYR GLY ILE PRO PRO ASN LYS ILE LEU TYR ILE ILE SEQRES 14 A 413 GLN ASP PHE GLU PRO GLY PHE TYR GLN TRP SER SER GLN SEQRES 15 A 413 TYR VAL LEU ALA GLU SER THR TYR LYS TYR ARG GLY PRO SEQRES 16 A 413 GLN ILE ALA VAL PHE ASN SER GLU LEU LEU LYS GLN TYR SEQRES 17 A 413 PHE ASN ASN LYS GLY TYR ASN PHE THR ASP GLU TYR PHE SEQRES 18 A 413 PHE GLN PRO LYS ILE ASN THR THR LEU LYS ASN TYR ILE SEQRES 19 A 413 ASN ASP LYS ARG GLN LYS GLU LYS ILE ILE LEU VAL TYR SEQRES 20 A 413 GLY ARG PRO SER VAL LYS ARG ASN ALA PHE THR LEU ILE SEQRES 21 A 413 VAL GLU ALA LEU LYS ILE PHE VAL GLN LYS TYR ASP ARG SEQRES 22 A 413 SER ASN GLU TRP LYS ILE ILE SER VAL GLY GLU LYS HIS SEQRES 23 A 413 LYS ASP ILE ALA LEU GLY LYS GLY ILE HIS LEU ASN SER SEQRES 24 A 413 LEU GLY LYS LEU THR LEU GLU ASP TYR ALA ASP LEU LEU SEQRES 25 A 413 LYS ARG SER SER ILE GLY ILE SER LEU MET ILE SER PRO SEQRES 26 A 413 HIS PRO SER TYR PRO PRO LEU GLU MET ALA HIS PHE GLY SEQRES 27 A 413 LEU ARG VAL ILE THR ASN LYS TYR GLU ASN LYS ASP LEU SEQRES 28 A 413 SER ASN TRP HIS SER ASN ILE VAL SER LEU GLU GLN LEU SEQRES 29 A 413 ASN PRO GLU ASN ILE ALA GLU THR LEU VAL GLU LEU CYS SEQRES 30 A 413 MET SER PHE ASN ASN ARG ASP VAL ASP LYS LYS GLU SER SEQRES 31 A 413 SER ASN MET MET PHE TYR ILE ASN GLU PHE ASN GLU PHE SEQRES 32 A 413 SER PHE ILE LYS GLU ILE GLU GLU LYS LEU SEQRES 1 B 413 MET LEU GLN LYS LEU ILE GLN ILE LEU ARG ARG ASN GLU SEQRES 2 B 413 TYR VAL LYS ASN VAL TYR LYS ASN THR VAL SER ASN PHE SEQRES 3 B 413 ILE GLU THR SER ILE PRO GLU ILE THR PRO PHE ASN ALA SEQRES 4 B 413 ARG THR SER SER ILE LYS GLY LYS ARG LEU ASN LEU LEU SEQRES 5 B 413 VAL PRO SER ILE ASN GLN GLU HIS MET PHE GLY GLY ILE SEQRES 6 B 413 SER THR ALA LEU LYS LEU PHE GLU GLN PHE ASP ASN ALA SEQRES 7 B 413 ALA PHE ALA LYS ARG ILE ILE LEU THR ASP ALA THR PRO SEQRES 8 B 413 ASN PRO LYS ASP LEU GLN SER PHE LYS SER PHE LYS TYR SEQRES 9 B 413 VAL MET PRO GLU GLU ASP LYS ASP PHE ALA LEU GLN ILE SEQRES 10 B 413 VAL PRO PHE ASN ASP ARG TYR ASN ARG THR ILE PRO VAL SEQRES 11 B 413 ALA LYS HIS ASP ILE PHE ILE ALA THR ALA TRP TRP THR SEQRES 12 B 413 ALA TYR ALA ALA GLN ARG ILE VAL SER TRP GLN SER ASP SEQRES 13 B 413 THR TYR GLY ILE PRO PRO ASN LYS ILE LEU TYR ILE ILE SEQRES 14 B 413 GLN ASP PHE GLU PRO GLY PHE TYR GLN TRP SER SER GLN SEQRES 15 B 413 TYR VAL LEU ALA GLU SER THR TYR LYS TYR ARG GLY PRO SEQRES 16 B 413 GLN ILE ALA VAL PHE ASN SER GLU LEU LEU LYS GLN TYR SEQRES 17 B 413 PHE ASN ASN LYS GLY TYR ASN PHE THR ASP GLU TYR PHE SEQRES 18 B 413 PHE GLN PRO LYS ILE ASN THR THR LEU LYS ASN TYR ILE SEQRES 19 B 413 ASN ASP LYS ARG GLN LYS GLU LYS ILE ILE LEU VAL TYR SEQRES 20 B 413 GLY ARG PRO SER VAL LYS ARG ASN ALA PHE THR LEU ILE SEQRES 21 B 413 VAL GLU ALA LEU LYS ILE PHE VAL GLN LYS TYR ASP ARG SEQRES 22 B 413 SER ASN GLU TRP LYS ILE ILE SER VAL GLY GLU LYS HIS SEQRES 23 B 413 LYS ASP ILE ALA LEU GLY LYS GLY ILE HIS LEU ASN SER SEQRES 24 B 413 LEU GLY LYS LEU THR LEU GLU ASP TYR ALA ASP LEU LEU SEQRES 25 B 413 LYS ARG SER SER ILE GLY ILE SER LEU MET ILE SER PRO SEQRES 26 B 413 HIS PRO SER TYR PRO PRO LEU GLU MET ALA HIS PHE GLY SEQRES 27 B 413 LEU ARG VAL ILE THR ASN LYS TYR GLU ASN LYS ASP LEU SEQRES 28 B 413 SER ASN TRP HIS SER ASN ILE VAL SER LEU GLU GLN LEU SEQRES 29 B 413 ASN PRO GLU ASN ILE ALA GLU THR LEU VAL GLU LEU CYS SEQRES 30 B 413 MET SER PHE ASN ASN ARG ASP VAL ASP LYS LYS GLU SER SEQRES 31 B 413 SER ASN MET MET PHE TYR ILE ASN GLU PHE ASN GLU PHE SEQRES 32 B 413 SER PHE ILE LYS GLU ILE GLU GLU LYS LEU HET TYD A 414 25 HET GOL A 415 6 HET GOL A 416 6 HET TYD B 414 25 HET GOL B 415 6 HETNAM TYD THYMIDINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 TYD 2(C10 H16 N2 O11 P2) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 8 HOH *114(H2 O) HELIX 1 1 ILE A 31 THR A 35 5 5 HELIX 2 2 PHE A 62 GLN A 74 1 13 HELIX 3 3 LYS A 94 LYS A 100 5 7 HELIX 4 4 ALA A 140 GLY A 159 1 20 HELIX 5 5 PHE A 172 TYR A 177 5 6 HELIX 6 6 SER A 180 TYR A 192 1 13 HELIX 7 7 SER A 202 LYS A 212 1 11 HELIX 8 8 ASN A 227 ASN A 232 1 6 HELIX 9 9 VAL A 252 ASN A 255 5 4 HELIX 10 10 ALA A 256 TYR A 271 1 16 HELIX 11 11 ARG A 273 TRP A 277 5 5 HELIX 12 12 THR A 304 SER A 315 1 12 HELIX 13 13 TYR A 329 HIS A 336 1 8 HELIX 14 14 ASP A 350 TRP A 354 5 5 HELIX 15 15 ASN A 365 PHE A 380 1 16 HELIX 16 16 MET A 393 ASN A 398 5 6 HELIX 17 17 SER A 404 GLU A 411 1 8 HELIX 18 18 ILE B 31 THR B 35 5 5 HELIX 19 19 PHE B 62 GLN B 74 1 13 HELIX 20 20 LYS B 94 LYS B 100 5 7 HELIX 21 21 ALA B 140 GLY B 159 1 20 HELIX 22 22 PHE B 172 TYR B 177 5 6 HELIX 23 23 SER B 180 TYR B 192 1 13 HELIX 24 24 SER B 202 LYS B 212 1 11 HELIX 25 25 ASN B 227 ASN B 232 1 6 HELIX 26 26 VAL B 252 ASN B 255 5 4 HELIX 27 27 ALA B 256 TYR B 271 1 16 HELIX 28 28 ARG B 273 TRP B 277 5 5 HELIX 29 29 THR B 304 SER B 315 1 12 HELIX 30 30 TYR B 329 HIS B 336 1 8 HELIX 31 31 ASP B 350 TRP B 354 5 5 HELIX 32 32 ASN B 365 PHE B 380 1 16 HELIX 33 33 MET B 393 ASN B 398 5 6 HELIX 34 34 SER B 404 GLU B 411 1 8 SHEET 1 AA 2 ALA A 39 THR A 41 0 SHEET 2 AA 2 ILE A 128 VAL A 130 1 O ILE A 128 N ARG A 40 SHEET 1 AB 8 LYS A 103 TYR A 104 0 SHEET 2 AB 8 LEU A 115 PRO A 119 1 O LEU A 115 N LYS A 103 SHEET 3 AB 8 ALA A 81 LEU A 86 1 O LYS A 82 N GLN A 116 SHEET 4 AB 8 ARG A 48 VAL A 53 1 O LEU A 49 N ARG A 83 SHEET 5 AB 8 ASP A 134 ALA A 138 1 O ILE A 135 N ASN A 50 SHEET 6 AB 8 ILE A 165 ILE A 169 1 O LEU A 166 N ALA A 138 SHEET 7 AB 8 GLN A 196 ASN A 201 1 O ILE A 197 N TYR A 167 SHEET 8 AB 8 ASP A 218 PHE A 222 1 O ASP A 218 N ALA A 198 SHEET 1 AC 7 ILE A 289 GLY A 292 0 SHEET 2 AC 7 ILE A 295 GLY A 301 -1 O ILE A 295 N LEU A 291 SHEET 3 AC 7 LYS A 278 GLY A 283 1 O ILE A 279 N ASN A 298 SHEET 4 AC 7 ILE A 243 GLY A 248 1 O ILE A 244 N ILE A 280 SHEET 5 AC 7 ILE A 317 ILE A 319 1 O ILE A 317 N LEU A 245 SHEET 6 AC 7 ARG A 340 ASN A 344 1 O ARG A 340 N GLY A 318 SHEET 7 AC 7 ILE A 358 LEU A 361 1 O VAL A 359 N THR A 343 SHEET 1 BA 2 ALA B 39 THR B 41 0 SHEET 2 BA 2 ILE B 128 VAL B 130 1 O ILE B 128 N ARG B 40 SHEET 1 BB 8 LYS B 103 TYR B 104 0 SHEET 2 BB 8 LEU B 115 PRO B 119 1 O LEU B 115 N LYS B 103 SHEET 3 BB 8 ALA B 81 LEU B 86 1 O LYS B 82 N GLN B 116 SHEET 4 BB 8 ARG B 48 VAL B 53 1 O LEU B 49 N ARG B 83 SHEET 5 BB 8 ASP B 134 ALA B 138 1 O ILE B 135 N ASN B 50 SHEET 6 BB 8 ILE B 165 ILE B 169 1 O LEU B 166 N ALA B 138 SHEET 7 BB 8 GLN B 196 ASN B 201 1 O ILE B 197 N TYR B 167 SHEET 8 BB 8 ASP B 218 PHE B 222 1 O ASP B 218 N ALA B 198 SHEET 1 BC 7 ILE B 289 GLY B 292 0 SHEET 2 BC 7 ILE B 295 GLY B 301 -1 O ILE B 295 N LEU B 291 SHEET 3 BC 7 LYS B 278 GLY B 283 1 O ILE B 279 N ASN B 298 SHEET 4 BC 7 ILE B 243 GLY B 248 1 O ILE B 244 N ILE B 280 SHEET 5 BC 7 ILE B 317 ILE B 319 1 O ILE B 317 N LEU B 245 SHEET 6 BC 7 ARG B 340 ASN B 344 1 O ARG B 340 N GLY B 318 SHEET 7 BC 7 ILE B 358 LEU B 361 1 O VAL B 359 N THR B 343 SITE 1 AC1 12 PHE A 62 GLY A 63 TYR A 247 ARG A 249 SITE 2 AC1 12 LYS A 302 LEU A 303 LEU A 305 TYR A 308 SITE 3 AC1 12 TYR A 329 GLU A 333 HOH A2063 HOH A2064 SITE 1 AC2 2 TYR A 220 PHE A 221 SITE 1 AC3 5 TYR A 183 TYR A 208 HOH A2051 TYR B 183 SITE 2 AC3 5 GOL B 415 SITE 1 AC4 11 PHE B 62 GLY B 63 TYR B 247 ARG B 249 SITE 2 AC4 11 GLY B 283 LYS B 302 LEU B 303 LEU B 305 SITE 3 AC4 11 TYR B 329 GLU B 333 HOH B2052 SITE 1 AC5 11 GLY A 175 TYR A 177 GLN A 178 TRP A 179 SITE 2 AC5 11 TYR A 183 GOL A 416 GLY B 175 TYR B 177 SITE 3 AC5 11 GLN B 178 TRP B 179 TYR B 183 CRYST1 75.820 75.560 77.710 90.00 103.05 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013189 0.000000 0.003057 0.00000 SCALE2 0.000000 0.013235 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013210 0.00000