data_2X1X # _entry.id 2X1X # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2X1X pdb_00002x1x 10.2210/pdb2x1x/pdb WWPDB D_1290042338 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1Y6A unspecified 'CRYSTAL STRUCTURE OF VEGFR2 IN COMPLEX WITH A 2-ANILINO-5-ARYL-OXAZOLE INHIBITOR' PDB 1Y6B unspecified 'CRYSTAL STRUCTURE OF VEGFR2 IN COMPLEX WITH A 2-ANILINO-5-ARYL-OXAZOLE INHIBITOR' PDB 1YWN unspecified 'VEGFR2 IN COMPLEX WITH A NOVEL 4-AMINO- FURO[2,3-D]PYRIMIDINE' PDB 1VR2 unspecified 'HUMAN VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2 (KDR) KINASE DOMAIN' PDB 2X1W unspecified 'CRYSTAL STRUCTURE OF VEGF-C IN COMPLEX WITH DOMAINS 2 AND 3 OF VEGFR2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2X1X _pdbx_database_status.recvd_initial_deposition_date 2010-01-08 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Leppanen, V.-M.' 1 'Prota, A.E.' 2 'Jeltsch, M.' 3 'Anisimov, A.' 4 'Kalkkinen, N.' 5 'Strandin, T.' 6 'Lankinen, H.' 7 'Goldman, A.' 8 'Ballmer-Hofer, K.' 9 'Alitalo, K.' 10 # _citation.id primary _citation.title 'Structural Determinants of Growth Factor Binding and Specificity by Vegf Receptor 2.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 107 _citation.page_first 2425 _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20145116 _citation.pdbx_database_id_DOI 10.1073/PNAS.0914318107 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Leppanen, V.-M.' 1 ? primary 'Prota, A.E.' 2 ? primary 'Jeltsch, M.' 3 ? primary 'Anisimov, A.' 4 ? primary 'Kalkkinen, N.' 5 ? primary 'Strandin, T.' 6 ? primary 'Lankinen, H.' 7 ? primary 'Goldman, A.' 8 ? primary 'Ballmer-Hofer, K.' 9 ? primary 'Alitalo, K.' 10 ? # _cell.entry_id 2X1X _cell.length_a 88.733 _cell.length_b 88.733 _cell.length_c 105.273 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X1X _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'VASCULAR ENDOTHELIAL GROWTH FACTOR C' 12390.194 1 ? YES 'VEGF HOMOLOGY DOMAIN, RESIDUES 112-215' ? 2 polymer man 'VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2' 23909.270 1 ? ? 'IG-LIKE DOMAINS 2 AND 3, RESIDUES 120-326' ? 3 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 2 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ? 5 non-polymer syn 'MERCURY (II) ION' 200.590 1 ? ? ? ? 6 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 7 water nat water 18.015 12 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'VEGF-C, VASCULAR ENDOTHELIAL GROWTH FACTOR-RELATED PROTEIN, VRP, FLT4 LIGAND, FLT4-L' 2 'VEGF RECEPTOR 2, VEGFR-2, KINASE INSERT DOMAIN RECEPTOR, PROTEIN-TYROSINE KINASE RECEPTOR FLK-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AHYNTEILKSIDNEWRKTQCMPREVAIDVGKEFGVATNTFFKPPCVSVYRCGGCCNSEGLQCMNTSTSYLSKTLFEITVP LSQGPKPVTISFANHTSCRCMSKLHHHHHH ; ;AHYNTEILKSIDNEWRKTQCMPREVAIDVGKEFGVATNTFFKPPCVSVYRCGGCCNSEGLQCMNTSTSYLSKTLFEITVP LSQGPKPVTISFANHTSCRCMSKLHHHHHH ; E ? 2 'polypeptide(L)' no no ;DYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVF CEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKT QSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIEGR ; ;DYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVF CEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKT QSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIEGR ; R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 HIS n 1 3 TYR n 1 4 ASN n 1 5 THR n 1 6 GLU n 1 7 ILE n 1 8 LEU n 1 9 LYS n 1 10 SER n 1 11 ILE n 1 12 ASP n 1 13 ASN n 1 14 GLU n 1 15 TRP n 1 16 ARG n 1 17 LYS n 1 18 THR n 1 19 GLN n 1 20 CYS n 1 21 MET n 1 22 PRO n 1 23 ARG n 1 24 GLU n 1 25 VAL n 1 26 ALA n 1 27 ILE n 1 28 ASP n 1 29 VAL n 1 30 GLY n 1 31 LYS n 1 32 GLU n 1 33 PHE n 1 34 GLY n 1 35 VAL n 1 36 ALA n 1 37 THR n 1 38 ASN n 1 39 THR n 1 40 PHE n 1 41 PHE n 1 42 LYS n 1 43 PRO n 1 44 PRO n 1 45 CYS n 1 46 VAL n 1 47 SER n 1 48 VAL n 1 49 TYR n 1 50 ARG n 1 51 CYS n 1 52 GLY n 1 53 GLY n 1 54 CYS n 1 55 CYS n 1 56 ASN n 1 57 SER n 1 58 GLU n 1 59 GLY n 1 60 LEU n 1 61 GLN n 1 62 CYS n 1 63 MET n 1 64 ASN n 1 65 THR n 1 66 SER n 1 67 THR n 1 68 SER n 1 69 TYR n 1 70 LEU n 1 71 SER n 1 72 LYS n 1 73 THR n 1 74 LEU n 1 75 PHE n 1 76 GLU n 1 77 ILE n 1 78 THR n 1 79 VAL n 1 80 PRO n 1 81 LEU n 1 82 SER n 1 83 GLN n 1 84 GLY n 1 85 PRO n 1 86 LYS n 1 87 PRO n 1 88 VAL n 1 89 THR n 1 90 ILE n 1 91 SER n 1 92 PHE n 1 93 ALA n 1 94 ASN n 1 95 HIS n 1 96 THR n 1 97 SER n 1 98 CYS n 1 99 ARG n 1 100 CYS n 1 101 MET n 1 102 SER n 1 103 LYS n 1 104 LEU n 1 105 HIS n 1 106 HIS n 1 107 HIS n 1 108 HIS n 1 109 HIS n 1 110 HIS n 2 1 ASP n 2 2 TYR n 2 3 ARG n 2 4 SER n 2 5 PRO n 2 6 PHE n 2 7 ILE n 2 8 ALA n 2 9 SER n 2 10 VAL n 2 11 SER n 2 12 ASP n 2 13 GLN n 2 14 HIS n 2 15 GLY n 2 16 VAL n 2 17 VAL n 2 18 TYR n 2 19 ILE n 2 20 THR n 2 21 GLU n 2 22 ASN n 2 23 LYS n 2 24 ASN n 2 25 LYS n 2 26 THR n 2 27 VAL n 2 28 VAL n 2 29 ILE n 2 30 PRO n 2 31 CYS n 2 32 LEU n 2 33 GLY n 2 34 SER n 2 35 ILE n 2 36 SER n 2 37 ASN n 2 38 LEU n 2 39 ASN n 2 40 VAL n 2 41 SER n 2 42 LEU n 2 43 CYS n 2 44 ALA n 2 45 ARG n 2 46 TYR n 2 47 PRO n 2 48 GLU n 2 49 LYS n 2 50 ARG n 2 51 PHE n 2 52 VAL n 2 53 PRO n 2 54 ASP n 2 55 GLY n 2 56 ASN n 2 57 ARG n 2 58 ILE n 2 59 SER n 2 60 TRP n 2 61 ASP n 2 62 SER n 2 63 LYS n 2 64 LYS n 2 65 GLY n 2 66 PHE n 2 67 THR n 2 68 ILE n 2 69 PRO n 2 70 SER n 2 71 TYR n 2 72 MET n 2 73 ILE n 2 74 SER n 2 75 TYR n 2 76 ALA n 2 77 GLY n 2 78 MET n 2 79 VAL n 2 80 PHE n 2 81 CYS n 2 82 GLU n 2 83 ALA n 2 84 LYS n 2 85 ILE n 2 86 ASN n 2 87 ASP n 2 88 GLU n 2 89 SER n 2 90 TYR n 2 91 GLN n 2 92 SER n 2 93 ILE n 2 94 MET n 2 95 TYR n 2 96 ILE n 2 97 VAL n 2 98 VAL n 2 99 VAL n 2 100 VAL n 2 101 GLY n 2 102 TYR n 2 103 ARG n 2 104 ILE n 2 105 TYR n 2 106 ASP n 2 107 VAL n 2 108 VAL n 2 109 LEU n 2 110 SER n 2 111 PRO n 2 112 SER n 2 113 HIS n 2 114 GLY n 2 115 ILE n 2 116 GLU n 2 117 LEU n 2 118 SER n 2 119 VAL n 2 120 GLY n 2 121 GLU n 2 122 LYS n 2 123 LEU n 2 124 VAL n 2 125 LEU n 2 126 ASN n 2 127 CYS n 2 128 THR n 2 129 ALA n 2 130 ARG n 2 131 THR n 2 132 GLU n 2 133 LEU n 2 134 ASN n 2 135 VAL n 2 136 GLY n 2 137 ILE n 2 138 ASP n 2 139 PHE n 2 140 ASN n 2 141 TRP n 2 142 GLU n 2 143 TYR n 2 144 PRO n 2 145 SER n 2 146 SER n 2 147 LYS n 2 148 HIS n 2 149 GLN n 2 150 HIS n 2 151 LYS n 2 152 LYS n 2 153 LEU n 2 154 VAL n 2 155 ASN n 2 156 ARG n 2 157 ASP n 2 158 LEU n 2 159 LYS n 2 160 THR n 2 161 GLN n 2 162 SER n 2 163 GLY n 2 164 SER n 2 165 GLU n 2 166 MET n 2 167 LYS n 2 168 LYS n 2 169 PHE n 2 170 LEU n 2 171 SER n 2 172 THR n 2 173 LEU n 2 174 THR n 2 175 ILE n 2 176 ASP n 2 177 GLY n 2 178 VAL n 2 179 THR n 2 180 ARG n 2 181 SER n 2 182 ASP n 2 183 GLN n 2 184 GLY n 2 185 LEU n 2 186 TYR n 2 187 THR n 2 188 CYS n 2 189 ALA n 2 190 ALA n 2 191 SER n 2 192 SER n 2 193 GLY n 2 194 LEU n 2 195 MET n 2 196 THR n 2 197 LYS n 2 198 LYS n 2 199 ASN n 2 200 SER n 2 201 THR n 2 202 PHE n 2 203 VAL n 2 204 ARG n 2 205 VAL n 2 206 HIS n 2 207 GLU n 2 208 ASP n 2 209 PRO n 2 210 ILE n 2 211 GLU n 2 212 GLY n 2 213 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? 'FALL ARMYWORM' 'SPODOPTERA FRUGIPERDA' 7108 ? ? ? ? ? ? ? ? SF9 ? ? ? ? ? BACULOVIRUS ? ? ? PFASTBAC ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? 'FALL ARMYWORM' 'SPODOPTERA FRUGIPERDA' 7108 ? ? ? ? ? ? ? ? SF9 ? ? ? ? ? BACULOVIRUS ? ? ? PFASTBAC ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP VEGFC_HUMAN 1 ? ? P49767 ? 2 PDB 2X1X 1 ? ? 2X1X ? 3 UNP VGFR2_HUMAN 2 ? ? P35968 ? 4 PDB 2X1X 2 ? ? 2X1X ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2X1X E 1 ? 104 ? P49767 112 ? 215 ? 112 215 2 2 2X1X E 105 ? 110 ? 2X1X 216 ? 221 ? 216 221 3 3 2X1X R 1 ? 207 ? P35968 120 ? 326 ? 120 326 4 4 2X1X R 208 ? 213 ? 2X1X 327 ? 332 ? 327 332 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2X1X _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id E _struct_ref_seq_dif.seq_num 26 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P49767 _struct_ref_seq_dif.db_mon_id CYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 137 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 137 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HG non-polymer . 'MERCURY (II) ION' ? 'Hg 2' 200.590 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2X1X _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 50 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 MM NA-ACETATE BUFFER, PH 4.4-4.8, 50 MM CSCL, 28-32 % (W/V) JEFFAMINE 600' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2009-04-20 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111) MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength 1.00 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2X1X _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 37.00 _reflns.d_resolution_high 3.10 _reflns.number_obs 8092 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 29.20 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 17.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.10 _reflns_shell.d_res_low 3.20 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.55 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 7.50 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2X1X _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7273 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.00 _refine.ls_d_res_high 3.10 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.27292 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.26625 _refine.ls_R_factor_R_free 0.33391 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 809 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.872 _refine.correlation_coeff_Fo_to_Fc_free 0.811 _refine.B_iso_mean 54.667 _refine.aniso_B[1][1] 1.33 _refine.aniso_B[2][2] 1.33 _refine.aniso_B[3][3] -2.66 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. RESIDUES E112, R120-R121, R128-R129 AND R206-R207 ARE DISORDERED. RESIDUES Y114 AND E117 IN CHAIN E AND RESIDUES R122, S130, D131, K144, K266, Q268 AND H269 IN CHAIN R HAD POOR SIDECHAIN DENSITY AND WERE MODELED AS ALANINES. ; _refine.pdbx_starting_model 'PDB ENTRY 2X1W' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.627 _refine.overall_SU_ML 0.490 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 27.174 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2327 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 149 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 2488 _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 37.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 2532 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.114 2.020 ? 3443 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.865 5.000 ? 300 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.224 23.804 ? 92 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.845 15.000 ? 403 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.800 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.065 0.200 ? 422 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.021 ? 1796 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.807 1.500 ? 1510 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.503 2.000 ? 2448 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.593 3.000 ? 1022 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.851 4.500 ? 995 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.100 _refine_ls_shell.d_res_low 3.180 _refine_ls_shell.number_reflns_R_work 524 _refine_ls_shell.R_factor_R_work 0.307 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.351 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2X1X _struct.title 'CRYSTAL STRUCTURE OF VEGF-C IN COMPLEX WITH DOMAINS 2 AND 3 OF VEGFR2 IN A TETRAGONAL CRYSTAL FORM' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2X1X _struct_keywords.pdbx_keywords 'HORMONE/SIGNALING PROTEIN' _struct_keywords.text ;HORMONE-SIGNALING PROTEIN COMPLEX, ANGIOGENESIS, GLYCOPROTEIN, HOST-VIRUS INTERACTION, RECEPTOR, LYMPHANGIOGENESIS, IMMUNOGLOBULIN DOMAIN, DEVELOPMENTAL PROTEIN, MITOGEN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 7 ? J N N 7 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 2 ? THR A 18 ? HIS E 113 THR E 129 1 ? 17 HELX_P HELX_P2 AA2 VAL A 29 ? PHE A 33 ? VAL E 140 PHE E 144 1 ? 5 HELX_P HELX_P3 AA3 TYR B 71 ? ILE B 73 ? TYR R 190 ILE R 192 5 ? 3 HELX_P HELX_P4 AA4 THR B 179 ? GLN B 183 ? THR R 298 GLN R 302 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 20 SG ? ? ? 1_555 A CYS 62 SG ? ? E CYS 131 E CYS 173 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 45 SG ? ? ? 1_555 A CYS 54 SG ? ? E CYS 156 E CYS 165 2_455 ? ? ? ? ? ? ? 2.285 ? ? disulf3 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 98 SG ? ? E CYS 162 E CYS 209 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf4 disulf ? ? A CYS 55 SG ? ? ? 1_555 A CYS 100 SG ? ? E CYS 166 E CYS 211 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf5 disulf ? ? B CYS 31 SG ? ? ? 1_555 B CYS 81 SG ? ? R CYS 150 R CYS 200 1_555 ? ? ? ? ? ? ? 2.017 ? ? disulf6 disulf ? ? B CYS 127 SG ? ? ? 1_555 B CYS 188 SG ? ? R CYS 246 R CYS 307 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? B ASN 24 ND2 ? ? ? 1_555 H NAG . C1 ? ? R ASN 143 R NAG 404 1_555 ? ? ? ? ? ? ? 1.270 ? N-Glycosylation covale2 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? A NAG 1 A NAG 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale3 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? A NAG 2 A BMA 3 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale4 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale5 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale6 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale7 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.436 ? ? metalc1 metalc ? ? B CYS 43 SG ? ? ? 1_555 G HG . HG ? ? R CYS 162 R HG 401 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc2 metalc ? ? G HG . HG ? ? ? 1_555 J HOH . O ? ? R HG 401 R HOH 505 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc3 metalc ? ? G HG . HG ? ? ? 1_555 J HOH . O ? ? R HG 401 R HOH 508 4_445 ? ? ? ? ? ? ? 2.577 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 42 A . ? LYS 153 E PRO 43 A ? PRO 154 E 1 0.67 2 VAL 79 A . ? VAL 190 E PRO 80 A ? PRO 191 E 1 -0.22 3 GLN 83 A . ? GLN 194 E GLY 84 A ? GLY 195 E 1 3.81 4 ASN 22 B . ? ASN 141 R LYS 23 B ? LYS 142 R 1 2.64 5 LYS 23 B . ? LYS 142 R ASN 24 B ? ASN 143 R 1 8.39 6 ARG 45 B . ? ARG 164 R TYR 46 B ? TYR 165 R 1 -4.97 7 TYR 46 B . ? TYR 165 R PRO 47 B ? PRO 166 R 1 0.08 8 GLY 55 B . ? GLY 174 R ASN 56 B ? ASN 175 R 1 6.43 9 SER 110 B . ? SER 229 R PRO 111 B ? PRO 230 R 1 0.59 10 GLN 161 B . ? GLN 280 R SER 162 B ? SER 281 R 1 -8.82 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? AA3 ? 5 ? AA4 ? 4 ? AA5 ? 3 ? AA6 ? 4 ? AA7 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MET A 21 ? ASP A 28 ? MET E 132 ASP E 139 AA1 2 CYS A 45 ? GLY A 52 ? CYS E 156 GLY E 163 AA2 1 THR A 39 ? LYS A 42 ? THR E 150 LYS E 153 AA2 2 LEU A 60 ? THR A 78 ? LEU E 171 THR E 189 AA2 3 LYS A 86 ? SER A 102 ? LYS E 197 SER E 213 AA3 1 HIS B 14 ? ILE B 19 ? HIS R 133 ILE R 138 AA3 2 MET B 94 ? VAL B 99 ? MET R 213 VAL R 218 AA3 3 MET B 78 ? ALA B 83 ? MET R 197 ALA R 202 AA3 4 VAL B 40 ? ARG B 45 ? VAL R 159 ARG R 164 AA3 5 LYS B 49 ? PHE B 51 ? LYS R 168 PHE R 170 AA4 1 HIS B 14 ? ILE B 19 ? HIS R 133 ILE R 138 AA4 2 MET B 94 ? VAL B 99 ? MET R 213 VAL R 218 AA4 3 MET B 78 ? ALA B 83 ? MET R 197 ALA R 202 AA4 4 TYR B 90 ? GLN B 91 ? TYR R 209 GLN R 210 AA5 1 THR B 26 ? ILE B 29 ? THR R 145 ILE R 148 AA5 2 GLY B 65 ? PRO B 69 ? GLY R 184 PRO R 188 AA5 3 SER B 59 ? ASP B 61 ? SER R 178 ASP R 180 AA6 1 ILE B 104 ? SER B 110 ? ILE R 223 SER R 229 AA6 2 LEU B 123 ? THR B 131 ? LEU R 242 THR R 250 AA6 3 LYS B 167 ? ILE B 175 ? LYS R 286 ILE R 294 AA6 4 LYS B 151 ? LEU B 158 ? LYS R 270 LEU R 277 AA7 1 ILE B 115 ? SER B 118 ? ILE R 234 SER R 237 AA7 2 MET B 195 ? HIS B 206 ? MET R 314 HIS R 325 AA7 3 GLY B 184 ? SER B 192 ? GLY R 303 SER R 311 AA7 4 ASP B 138 ? GLU B 142 ? ASP R 257 GLU R 261 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 23 ? N ARG E 134 O ARG A 50 ? O ARG E 161 AA2 1 2 N PHE A 40 ? N PHE E 151 O ILE A 77 ? O ILE E 188 AA2 2 3 N SER A 68 ? N SER E 179 O ASN A 94 ? O ASN E 205 AA3 1 2 N VAL B 17 ? N VAL R 136 O VAL B 98 ? O VAL R 217 AA3 2 3 O TYR B 95 ? O TYR R 214 N VAL B 79 ? N VAL R 198 AA3 3 4 O GLU B 82 ? O GLU R 201 N SER B 41 ? N SER R 160 AA3 4 5 N ALA B 44 ? N ALA R 163 O LYS B 49 ? O LYS R 168 AA4 1 2 N VAL B 17 ? N VAL R 136 O VAL B 98 ? O VAL R 217 AA4 2 3 O TYR B 95 ? O TYR R 214 N VAL B 79 ? N VAL R 198 AA4 3 4 N ALA B 83 ? N ALA R 202 O TYR B 90 ? O TYR R 209 AA5 1 2 N VAL B 27 ? N VAL R 146 O ILE B 68 ? O ILE R 187 AA5 2 3 O GLY B 65 ? O GLY R 184 N ASP B 61 ? N ASP R 180 AA6 1 2 N TYR B 105 ? N TYR R 224 O ARG B 130 ? O ARG R 249 AA6 2 3 N CYS B 127 ? N CYS R 246 O SER B 171 ? O SER R 290 AA6 3 4 O LEU B 170 ? O LEU R 289 N ARG B 156 ? N ARG R 275 AA7 1 2 N ILE B 115 ? N ILE R 234 O ARG B 204 ? O ARG R 323 AA7 2 3 O VAL B 203 ? O VAL R 322 N GLY B 184 ? N GLY R 303 AA7 3 4 O THR B 187 ? O THR R 306 N GLU B 142 ? N GLU R 261 # _database_PDB_matrix.entry_id 2X1X _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2X1X _atom_sites.fract_transf_matrix[1][1] 0.011270 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011270 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009499 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C HG N O S # loop_ _database_PDB_caveat.text 'NAG R 404 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 112 ? ? ? E . n A 1 2 HIS 2 113 113 HIS HIS E . n A 1 3 TYR 3 114 114 TYR TYR E . n A 1 4 ASN 4 115 115 ASN ASN E . n A 1 5 THR 5 116 116 THR THR E . n A 1 6 GLU 6 117 117 GLU GLU E . n A 1 7 ILE 7 118 118 ILE ILE E . n A 1 8 LEU 8 119 119 LEU LEU E . n A 1 9 LYS 9 120 120 LYS LYS E . n A 1 10 SER 10 121 121 SER SER E . n A 1 11 ILE 11 122 122 ILE ILE E . n A 1 12 ASP 12 123 123 ASP ASP E . n A 1 13 ASN 13 124 124 ASN ASN E . n A 1 14 GLU 14 125 125 GLU GLU E . n A 1 15 TRP 15 126 126 TRP TRP E . n A 1 16 ARG 16 127 127 ARG ARG E . n A 1 17 LYS 17 128 128 LYS LYS E . n A 1 18 THR 18 129 129 THR THR E . n A 1 19 GLN 19 130 130 GLN GLN E . n A 1 20 CYS 20 131 131 CYS CYS E . n A 1 21 MET 21 132 132 MET MET E . n A 1 22 PRO 22 133 133 PRO PRO E . n A 1 23 ARG 23 134 134 ARG ARG E . n A 1 24 GLU 24 135 135 GLU GLU E . n A 1 25 VAL 25 136 136 VAL VAL E . n A 1 26 ALA 26 137 137 ALA ALA E . n A 1 27 ILE 27 138 138 ILE ILE E . n A 1 28 ASP 28 139 139 ASP ASP E . n A 1 29 VAL 29 140 140 VAL VAL E . n A 1 30 GLY 30 141 141 GLY GLY E . n A 1 31 LYS 31 142 142 LYS LYS E . n A 1 32 GLU 32 143 143 GLU GLU E . n A 1 33 PHE 33 144 144 PHE PHE E . n A 1 34 GLY 34 145 145 GLY GLY E . n A 1 35 VAL 35 146 146 VAL VAL E . n A 1 36 ALA 36 147 147 ALA ALA E . n A 1 37 THR 37 148 148 THR THR E . n A 1 38 ASN 38 149 149 ASN ASN E . n A 1 39 THR 39 150 150 THR THR E . n A 1 40 PHE 40 151 151 PHE PHE E . n A 1 41 PHE 41 152 152 PHE PHE E . n A 1 42 LYS 42 153 153 LYS LYS E . n A 1 43 PRO 43 154 154 PRO PRO E . n A 1 44 PRO 44 155 155 PRO PRO E . n A 1 45 CYS 45 156 156 CYS CYS E . n A 1 46 VAL 46 157 157 VAL VAL E . n A 1 47 SER 47 158 158 SER SER E . n A 1 48 VAL 48 159 159 VAL VAL E . n A 1 49 TYR 49 160 160 TYR TYR E . n A 1 50 ARG 50 161 161 ARG ARG E . n A 1 51 CYS 51 162 162 CYS CYS E . n A 1 52 GLY 52 163 163 GLY GLY E . n A 1 53 GLY 53 164 164 GLY GLY E . n A 1 54 CYS 54 165 165 CYS CYS E . n A 1 55 CYS 55 166 166 CYS CYS E . n A 1 56 ASN 56 167 167 ASN ASN E . n A 1 57 SER 57 168 168 SER SER E . n A 1 58 GLU 58 169 169 GLU GLU E . n A 1 59 GLY 59 170 170 GLY GLY E . n A 1 60 LEU 60 171 171 LEU LEU E . n A 1 61 GLN 61 172 172 GLN GLN E . n A 1 62 CYS 62 173 173 CYS CYS E . n A 1 63 MET 63 174 174 MET MET E . n A 1 64 ASN 64 175 175 ASN ASN E . n A 1 65 THR 65 176 176 THR THR E . n A 1 66 SER 66 177 177 SER SER E . n A 1 67 THR 67 178 178 THR THR E . n A 1 68 SER 68 179 179 SER SER E . n A 1 69 TYR 69 180 180 TYR TYR E . n A 1 70 LEU 70 181 181 LEU LEU E . n A 1 71 SER 71 182 182 SER SER E . n A 1 72 LYS 72 183 183 LYS LYS E . n A 1 73 THR 73 184 184 THR THR E . n A 1 74 LEU 74 185 185 LEU LEU E . n A 1 75 PHE 75 186 186 PHE PHE E . n A 1 76 GLU 76 187 187 GLU GLU E . n A 1 77 ILE 77 188 188 ILE ILE E . n A 1 78 THR 78 189 189 THR THR E . n A 1 79 VAL 79 190 190 VAL VAL E . n A 1 80 PRO 80 191 191 PRO PRO E . n A 1 81 LEU 81 192 192 LEU LEU E . n A 1 82 SER 82 193 193 SER SER E . n A 1 83 GLN 83 194 194 GLN GLN E . n A 1 84 GLY 84 195 195 GLY GLY E . n A 1 85 PRO 85 196 196 PRO PRO E . n A 1 86 LYS 86 197 197 LYS LYS E . n A 1 87 PRO 87 198 198 PRO PRO E . n A 1 88 VAL 88 199 199 VAL VAL E . n A 1 89 THR 89 200 200 THR THR E . n A 1 90 ILE 90 201 201 ILE ILE E . n A 1 91 SER 91 202 202 SER SER E . n A 1 92 PHE 92 203 203 PHE PHE E . n A 1 93 ALA 93 204 204 ALA ALA E . n A 1 94 ASN 94 205 205 ASN ASN E . n A 1 95 HIS 95 206 206 HIS HIS E . n A 1 96 THR 96 207 207 THR THR E . n A 1 97 SER 97 208 208 SER SER E . n A 1 98 CYS 98 209 209 CYS CYS E . n A 1 99 ARG 99 210 210 ARG ARG E . n A 1 100 CYS 100 211 211 CYS CYS E . n A 1 101 MET 101 212 212 MET MET E . n A 1 102 SER 102 213 213 SER SER E . n A 1 103 LYS 103 214 214 LYS LYS E . n A 1 104 LEU 104 215 215 LEU LEU E . n A 1 105 HIS 105 216 ? ? ? E . n A 1 106 HIS 106 217 ? ? ? E . n A 1 107 HIS 107 218 ? ? ? E . n A 1 108 HIS 108 219 ? ? ? E . n A 1 109 HIS 109 220 ? ? ? E . n A 1 110 HIS 110 221 ? ? ? E . n B 2 1 ASP 1 120 ? ? ? R . n B 2 2 TYR 2 121 ? ? ? R . n B 2 3 ARG 3 122 122 ARG ARG R . n B 2 4 SER 4 123 123 SER SER R . n B 2 5 PRO 5 124 124 PRO PRO R . n B 2 6 PHE 6 125 125 PHE PHE R . n B 2 7 ILE 7 126 126 ILE ILE R . n B 2 8 ALA 8 127 127 ALA ALA R . n B 2 9 SER 9 128 ? ? ? R . n B 2 10 VAL 10 129 ? ? ? R . n B 2 11 SER 11 130 130 SER SER R . n B 2 12 ASP 12 131 131 ASP ASP R . n B 2 13 GLN 13 132 132 GLN GLN R . n B 2 14 HIS 14 133 133 HIS HIS R . n B 2 15 GLY 15 134 134 GLY GLY R . n B 2 16 VAL 16 135 135 VAL VAL R . n B 2 17 VAL 17 136 136 VAL VAL R . n B 2 18 TYR 18 137 137 TYR TYR R . n B 2 19 ILE 19 138 138 ILE ILE R . n B 2 20 THR 20 139 139 THR THR R . n B 2 21 GLU 21 140 140 GLU GLU R . n B 2 22 ASN 22 141 141 ASN ASN R . n B 2 23 LYS 23 142 142 LYS LYS R . n B 2 24 ASN 24 143 143 ASN ASN R . n B 2 25 LYS 25 144 144 LYS LYS R . n B 2 26 THR 26 145 145 THR THR R . n B 2 27 VAL 27 146 146 VAL VAL R . n B 2 28 VAL 28 147 147 VAL VAL R . n B 2 29 ILE 29 148 148 ILE ILE R . n B 2 30 PRO 30 149 149 PRO PRO R . n B 2 31 CYS 31 150 150 CYS CYS R . n B 2 32 LEU 32 151 151 LEU LEU R . n B 2 33 GLY 33 152 152 GLY GLY R . n B 2 34 SER 34 153 153 SER SER R . n B 2 35 ILE 35 154 154 ILE ILE R . n B 2 36 SER 36 155 155 SER SER R . n B 2 37 ASN 37 156 156 ASN ASN R . n B 2 38 LEU 38 157 157 LEU LEU R . n B 2 39 ASN 39 158 158 ASN ASN R . n B 2 40 VAL 40 159 159 VAL VAL R . n B 2 41 SER 41 160 160 SER SER R . n B 2 42 LEU 42 161 161 LEU LEU R . n B 2 43 CYS 43 162 162 CYS CYS R . n B 2 44 ALA 44 163 163 ALA ALA R . n B 2 45 ARG 45 164 164 ARG ARG R . n B 2 46 TYR 46 165 165 TYR TYR R . n B 2 47 PRO 47 166 166 PRO PRO R . n B 2 48 GLU 48 167 167 GLU GLU R . n B 2 49 LYS 49 168 168 LYS LYS R . n B 2 50 ARG 50 169 169 ARG ARG R . n B 2 51 PHE 51 170 170 PHE PHE R . n B 2 52 VAL 52 171 171 VAL VAL R . n B 2 53 PRO 53 172 172 PRO PRO R . n B 2 54 ASP 54 173 173 ASP ASP R . n B 2 55 GLY 55 174 174 GLY GLY R . n B 2 56 ASN 56 175 175 ASN ASN R . n B 2 57 ARG 57 176 176 ARG ARG R . n B 2 58 ILE 58 177 177 ILE ILE R . n B 2 59 SER 59 178 178 SER SER R . n B 2 60 TRP 60 179 179 TRP TRP R . n B 2 61 ASP 61 180 180 ASP ASP R . n B 2 62 SER 62 181 181 SER SER R . n B 2 63 LYS 63 182 182 LYS LYS R . n B 2 64 LYS 64 183 183 LYS LYS R . n B 2 65 GLY 65 184 184 GLY GLY R . n B 2 66 PHE 66 185 185 PHE PHE R . n B 2 67 THR 67 186 186 THR THR R . n B 2 68 ILE 68 187 187 ILE ILE R . n B 2 69 PRO 69 188 188 PRO PRO R . n B 2 70 SER 70 189 189 SER SER R . n B 2 71 TYR 71 190 190 TYR TYR R . n B 2 72 MET 72 191 191 MET MET R . n B 2 73 ILE 73 192 192 ILE ILE R . n B 2 74 SER 74 193 193 SER SER R . n B 2 75 TYR 75 194 194 TYR TYR R . n B 2 76 ALA 76 195 195 ALA ALA R . n B 2 77 GLY 77 196 196 GLY GLY R . n B 2 78 MET 78 197 197 MET MET R . n B 2 79 VAL 79 198 198 VAL VAL R . n B 2 80 PHE 80 199 199 PHE PHE R . n B 2 81 CYS 81 200 200 CYS CYS R . n B 2 82 GLU 82 201 201 GLU GLU R . n B 2 83 ALA 83 202 202 ALA ALA R . n B 2 84 LYS 84 203 203 LYS LYS R . n B 2 85 ILE 85 204 204 ILE ILE R . n B 2 86 ASN 86 205 205 ASN ASN R . n B 2 87 ASP 87 206 ? ? ? R . n B 2 88 GLU 88 207 ? ? ? R . n B 2 89 SER 89 208 208 SER SER R . n B 2 90 TYR 90 209 209 TYR TYR R . n B 2 91 GLN 91 210 210 GLN GLN R . n B 2 92 SER 92 211 211 SER SER R . n B 2 93 ILE 93 212 212 ILE ILE R . n B 2 94 MET 94 213 213 MET MET R . n B 2 95 TYR 95 214 214 TYR TYR R . n B 2 96 ILE 96 215 215 ILE ILE R . n B 2 97 VAL 97 216 216 VAL VAL R . n B 2 98 VAL 98 217 217 VAL VAL R . n B 2 99 VAL 99 218 218 VAL VAL R . n B 2 100 VAL 100 219 219 VAL VAL R . n B 2 101 GLY 101 220 220 GLY GLY R . n B 2 102 TYR 102 221 221 TYR TYR R . n B 2 103 ARG 103 222 222 ARG ARG R . n B 2 104 ILE 104 223 223 ILE ILE R . n B 2 105 TYR 105 224 224 TYR TYR R . n B 2 106 ASP 106 225 225 ASP ASP R . n B 2 107 VAL 107 226 226 VAL VAL R . n B 2 108 VAL 108 227 227 VAL VAL R . n B 2 109 LEU 109 228 228 LEU LEU R . n B 2 110 SER 110 229 229 SER SER R . n B 2 111 PRO 111 230 230 PRO PRO R . n B 2 112 SER 112 231 231 SER SER R . n B 2 113 HIS 113 232 232 HIS HIS R . n B 2 114 GLY 114 233 233 GLY GLY R . n B 2 115 ILE 115 234 234 ILE ILE R . n B 2 116 GLU 116 235 235 GLU GLU R . n B 2 117 LEU 117 236 236 LEU LEU R . n B 2 118 SER 118 237 237 SER SER R . n B 2 119 VAL 119 238 238 VAL VAL R . n B 2 120 GLY 120 239 239 GLY GLY R . n B 2 121 GLU 121 240 240 GLU GLU R . n B 2 122 LYS 122 241 241 LYS LYS R . n B 2 123 LEU 123 242 242 LEU LEU R . n B 2 124 VAL 124 243 243 VAL VAL R . n B 2 125 LEU 125 244 244 LEU LEU R . n B 2 126 ASN 126 245 245 ASN ASN R . n B 2 127 CYS 127 246 246 CYS CYS R . n B 2 128 THR 128 247 247 THR THR R . n B 2 129 ALA 129 248 248 ALA ALA R . n B 2 130 ARG 130 249 249 ARG ARG R . n B 2 131 THR 131 250 250 THR THR R . n B 2 132 GLU 132 251 251 GLU GLU R . n B 2 133 LEU 133 252 252 LEU LEU R . n B 2 134 ASN 134 253 253 ASN ASN R . n B 2 135 VAL 135 254 254 VAL VAL R . n B 2 136 GLY 136 255 255 GLY GLY R . n B 2 137 ILE 137 256 256 ILE ILE R . n B 2 138 ASP 138 257 257 ASP ASP R . n B 2 139 PHE 139 258 258 PHE PHE R . n B 2 140 ASN 140 259 259 ASN ASN R . n B 2 141 TRP 141 260 260 TRP TRP R . n B 2 142 GLU 142 261 261 GLU GLU R . n B 2 143 TYR 143 262 262 TYR TYR R . n B 2 144 PRO 144 263 263 PRO PRO R . n B 2 145 SER 145 264 264 SER SER R . n B 2 146 SER 146 265 265 SER SER R . n B 2 147 LYS 147 266 266 LYS LYS R . n B 2 148 HIS 148 267 267 HIS HIS R . n B 2 149 GLN 149 268 268 GLN GLN R . n B 2 150 HIS 150 269 269 HIS HIS R . n B 2 151 LYS 151 270 270 LYS LYS R . n B 2 152 LYS 152 271 271 LYS LYS R . n B 2 153 LEU 153 272 272 LEU LEU R . n B 2 154 VAL 154 273 273 VAL VAL R . n B 2 155 ASN 155 274 274 ASN ASN R . n B 2 156 ARG 156 275 275 ARG ARG R . n B 2 157 ASP 157 276 276 ASP ASP R . n B 2 158 LEU 158 277 277 LEU LEU R . n B 2 159 LYS 159 278 278 LYS LYS R . n B 2 160 THR 160 279 279 THR THR R . n B 2 161 GLN 161 280 280 GLN GLN R . n B 2 162 SER 162 281 281 SER SER R . n B 2 163 GLY 163 282 282 GLY GLY R . n B 2 164 SER 164 283 283 SER SER R . n B 2 165 GLU 165 284 284 GLU GLU R . n B 2 166 MET 166 285 285 MET MET R . n B 2 167 LYS 167 286 286 LYS LYS R . n B 2 168 LYS 168 287 287 LYS LYS R . n B 2 169 PHE 169 288 288 PHE PHE R . n B 2 170 LEU 170 289 289 LEU LEU R . n B 2 171 SER 171 290 290 SER SER R . n B 2 172 THR 172 291 291 THR THR R . n B 2 173 LEU 173 292 292 LEU LEU R . n B 2 174 THR 174 293 293 THR THR R . n B 2 175 ILE 175 294 294 ILE ILE R . n B 2 176 ASP 176 295 295 ASP ASP R . n B 2 177 GLY 177 296 296 GLY GLY R . n B 2 178 VAL 178 297 297 VAL VAL R . n B 2 179 THR 179 298 298 THR THR R . n B 2 180 ARG 180 299 299 ARG ARG R . n B 2 181 SER 181 300 300 SER SER R . n B 2 182 ASP 182 301 301 ASP ASP R . n B 2 183 GLN 183 302 302 GLN GLN R . n B 2 184 GLY 184 303 303 GLY GLY R . n B 2 185 LEU 185 304 304 LEU LEU R . n B 2 186 TYR 186 305 305 TYR TYR R . n B 2 187 THR 187 306 306 THR THR R . n B 2 188 CYS 188 307 307 CYS CYS R . n B 2 189 ALA 189 308 308 ALA ALA R . n B 2 190 ALA 190 309 309 ALA ALA R . n B 2 191 SER 191 310 310 SER SER R . n B 2 192 SER 192 311 311 SER SER R . n B 2 193 GLY 193 312 312 GLY GLY R . n B 2 194 LEU 194 313 313 LEU LEU R . n B 2 195 MET 195 314 314 MET MET R . n B 2 196 THR 196 315 315 THR THR R . n B 2 197 LYS 197 316 316 LYS LYS R . n B 2 198 LYS 198 317 317 LYS LYS R . n B 2 199 ASN 199 318 318 ASN ASN R . n B 2 200 SER 200 319 319 SER SER R . n B 2 201 THR 201 320 320 THR THR R . n B 2 202 PHE 202 321 321 PHE PHE R . n B 2 203 VAL 203 322 322 VAL VAL R . n B 2 204 ARG 204 323 323 ARG ARG R . n B 2 205 VAL 205 324 324 VAL VAL R . n B 2 206 HIS 206 325 325 HIS HIS R . n B 2 207 GLU 207 326 326 GLU GLU R . n B 2 208 ASP 208 327 ? ? ? R . n B 2 209 PRO 209 328 ? ? ? R . n B 2 210 ILE 210 329 ? ? ? R . n B 2 211 GLU 211 330 ? ? ? R . n B 2 212 GLY 212 331 ? ? ? R . n B 2 213 ARG 213 332 ? ? ? R . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 HG 1 401 1327 HG HG R . H 6 NAG 1 404 1330 NAG NAG R . I 7 HOH 1 2001 2001 HOH HOH E . I 7 HOH 2 2002 2002 HOH HOH E . I 7 HOH 3 2003 2003 HOH HOH E . I 7 HOH 4 2004 2004 HOH HOH E . J 7 HOH 1 501 2008 HOH HOH R . J 7 HOH 2 502 2005 HOH HOH R . J 7 HOH 3 503 2006 HOH HOH R . J 7 HOH 4 504 2004 HOH HOH R . J 7 HOH 5 505 2002 HOH HOH R . J 7 HOH 6 506 2003 HOH HOH R . J 7 HOH 7 507 2001 HOH HOH R . J 7 HOH 8 508 2007 HOH HOH R . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 24 _pdbx_struct_mod_residue.auth_asym_id R _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 143 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 12900 ? 1 MORE -42.3 ? 1 'SSA (A^2)' 33300 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1.0000000000 0.0000000000 0.0000000000 -88.7330000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? B CYS 43 ? R CYS 162 ? 1_555 HG ? G HG . ? R HG 401 ? 1_555 O ? J HOH . ? R HOH 505 ? 1_555 84.2 ? 2 SG ? B CYS 43 ? R CYS 162 ? 1_555 HG ? G HG . ? R HG 401 ? 1_555 O ? J HOH . ? R HOH 508 ? 4_445 119.3 ? 3 O ? J HOH . ? R HOH 505 ? 1_555 HG ? G HG . ? R HG 401 ? 1_555 O ? J HOH . ? R HOH 508 ? 4_445 156.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-09 2 'Structure model' 1 1 2011-08-10 3 'Structure model' 1 2 2017-07-12 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Non-polymer description' 4 2 'Structure model' Other 5 2 'Structure model' 'Structure summary' 6 2 'Structure model' 'Version format compliance' 7 3 'Structure model' Advisory 8 3 'Structure model' 'Derived calculations' 9 4 'Structure model' Advisory 10 4 'Structure model' 'Atomic model' 11 4 'Structure model' 'Data collection' 12 4 'Structure model' 'Derived calculations' 13 4 'Structure model' Other 14 4 'Structure model' 'Structure summary' 15 5 'Structure model' 'Data collection' 16 5 'Structure model' 'Database references' 17 5 'Structure model' 'Refinement description' 18 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_PDB_caveat 2 3 'Structure model' struct_site 3 3 'Structure model' struct_site_gen 4 4 'Structure model' atom_site 5 4 'Structure model' chem_comp 6 4 'Structure model' entity 7 4 'Structure model' pdbx_branch_scheme 8 4 'Structure model' pdbx_chem_comp_identifier 9 4 'Structure model' pdbx_database_status 10 4 'Structure model' pdbx_entity_branch 11 4 'Structure model' pdbx_entity_branch_descriptor 12 4 'Structure model' pdbx_entity_branch_link 13 4 'Structure model' pdbx_entity_branch_list 14 4 'Structure model' pdbx_entity_nonpoly 15 4 'Structure model' pdbx_nonpoly_scheme 16 4 'Structure model' pdbx_struct_assembly_gen 17 4 'Structure model' pdbx_struct_conn_angle 18 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 19 4 'Structure model' struct_asym 20 4 'Structure model' struct_conn 21 4 'Structure model' struct_site 22 4 'Structure model' struct_site_gen 23 5 'Structure model' chem_comp 24 5 'Structure model' chem_comp_atom 25 5 'Structure model' chem_comp_bond 26 5 'Structure model' database_2 27 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_struct_site.details' 2 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 3 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 4 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 5 3 'Structure model' '_struct_site.pdbx_num_residues' 6 4 'Structure model' '_atom_site.B_iso_or_equiv' 7 4 'Structure model' '_atom_site.Cartn_x' 8 4 'Structure model' '_atom_site.Cartn_y' 9 4 'Structure model' '_atom_site.Cartn_z' 10 4 'Structure model' '_atom_site.auth_asym_id' 11 4 'Structure model' '_atom_site.auth_atom_id' 12 4 'Structure model' '_atom_site.auth_comp_id' 13 4 'Structure model' '_atom_site.auth_seq_id' 14 4 'Structure model' '_atom_site.label_asym_id' 15 4 'Structure model' '_atom_site.label_atom_id' 16 4 'Structure model' '_atom_site.label_comp_id' 17 4 'Structure model' '_atom_site.label_entity_id' 18 4 'Structure model' '_atom_site.type_symbol' 19 4 'Structure model' '_chem_comp.name' 20 4 'Structure model' '_chem_comp.type' 21 4 'Structure model' '_pdbx_database_status.status_code_sf' 22 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 26 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_asym_id' 27 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_seq_id' 28 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id' 29 4 'Structure model' '_struct_conn.conn_type_id' 30 4 'Structure model' '_struct_conn.id' 31 4 'Structure model' '_struct_conn.pdbx_dist_value' 32 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 33 4 'Structure model' '_struct_conn.pdbx_role' 34 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 35 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 36 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 38 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 39 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 40 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 41 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 42 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 43 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 45 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 46 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 47 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 48 4 'Structure model' '_struct_conn.ptnr2_symmetry' 49 5 'Structure model' '_chem_comp.pdbx_synonyms' 50 5 'Structure model' '_database_2.pdbx_DOI' 51 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0072 ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2X1X _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN E, CYS 137 TO ALA' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE VEGF-C PROTEIN STUDIED COVERS RESIDUES 112-215 WITH A C- TERMINAL 6HIS-TAG AND A C137A MUTATION. THE VEGFR-2 PROTEIN STUDIED COVERS RESIDUES 120-326 WITH THE ARTIFICIAL RESIDUES DPIEGR AT THE C-TERMINUS. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 R _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 143 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O5 _pdbx_validate_close_contact.auth_asym_id_2 R _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 404 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.01 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL E 146 ? ? -62.42 -89.97 2 1 GLN E 194 ? ? -92.85 -159.78 3 1 LYS R 144 ? ? 80.55 -20.25 4 1 PRO R 149 ? ? -69.40 74.08 5 1 CYS R 150 ? ? -92.83 48.72 6 1 ASN R 156 ? ? -75.21 49.22 7 1 ARG R 176 ? ? 171.32 -63.77 8 1 TYR R 221 ? ? -145.78 -21.30 9 1 SER R 281 ? ? 59.30 -63.10 10 1 SER R 283 ? ? -21.64 -116.27 11 1 GLU R 284 ? ? -150.52 36.42 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C1 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id R _pdbx_validate_chiral.auth_comp_id NAG _pdbx_validate_chiral.auth_seq_id 404 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 E TYR 114 ? CG ? A TYR 3 CG 2 1 Y 1 E TYR 114 ? CD1 ? A TYR 3 CD1 3 1 Y 1 E TYR 114 ? CD2 ? A TYR 3 CD2 4 1 Y 1 E TYR 114 ? CE1 ? A TYR 3 CE1 5 1 Y 1 E TYR 114 ? CE2 ? A TYR 3 CE2 6 1 Y 1 E TYR 114 ? CZ ? A TYR 3 CZ 7 1 Y 1 E TYR 114 ? OH ? A TYR 3 OH 8 1 Y 1 E GLU 117 ? CG ? A GLU 6 CG 9 1 Y 1 E GLU 117 ? CD ? A GLU 6 CD 10 1 Y 1 E GLU 117 ? OE1 ? A GLU 6 OE1 11 1 Y 1 E GLU 117 ? OE2 ? A GLU 6 OE2 12 1 Y 1 E LYS 128 ? CG ? A LYS 17 CG 13 1 Y 1 E LYS 128 ? CD ? A LYS 17 CD 14 1 Y 1 E LYS 128 ? CE ? A LYS 17 CE 15 1 Y 1 E LYS 128 ? NZ ? A LYS 17 NZ 16 1 Y 1 E LEU 215 ? CG ? A LEU 104 CG 17 1 Y 1 E LEU 215 ? CD1 ? A LEU 104 CD1 18 1 Y 1 E LEU 215 ? CD2 ? A LEU 104 CD2 19 1 Y 1 R ARG 122 ? CG ? B ARG 3 CG 20 1 Y 1 R ARG 122 ? CD ? B ARG 3 CD 21 1 Y 1 R ARG 122 ? NE ? B ARG 3 NE 22 1 Y 1 R ARG 122 ? CZ ? B ARG 3 CZ 23 1 Y 1 R ARG 122 ? NH1 ? B ARG 3 NH1 24 1 Y 1 R ARG 122 ? NH2 ? B ARG 3 NH2 25 1 Y 1 R SER 130 ? OG ? B SER 11 OG 26 1 Y 1 R ASP 131 ? CG ? B ASP 12 CG 27 1 Y 1 R ASP 131 ? OD1 ? B ASP 12 OD1 28 1 Y 1 R ASP 131 ? OD2 ? B ASP 12 OD2 29 1 Y 1 R LYS 144 ? CG ? B LYS 25 CG 30 1 Y 1 R LYS 144 ? CD ? B LYS 25 CD 31 1 Y 1 R LYS 144 ? CE ? B LYS 25 CE 32 1 Y 1 R LYS 144 ? NZ ? B LYS 25 NZ 33 1 Y 1 R LYS 183 ? CG ? B LYS 64 CG 34 1 Y 1 R LYS 183 ? CD ? B LYS 64 CD 35 1 Y 1 R LYS 183 ? CE ? B LYS 64 CE 36 1 Y 1 R LYS 183 ? NZ ? B LYS 64 NZ 37 1 Y 1 R LYS 266 ? CG ? B LYS 147 CG 38 1 Y 1 R LYS 266 ? CD ? B LYS 147 CD 39 1 Y 1 R LYS 266 ? CE ? B LYS 147 CE 40 1 Y 1 R LYS 266 ? NZ ? B LYS 147 NZ 41 1 Y 1 R GLN 268 ? CG ? B GLN 149 CG 42 1 Y 1 R GLN 268 ? CD ? B GLN 149 CD 43 1 Y 1 R GLN 268 ? OE1 ? B GLN 149 OE1 44 1 Y 1 R GLN 268 ? NE2 ? B GLN 149 NE2 45 1 Y 1 R HIS 269 ? CG ? B HIS 150 CG 46 1 Y 1 R HIS 269 ? ND1 ? B HIS 150 ND1 47 1 Y 1 R HIS 269 ? CD2 ? B HIS 150 CD2 48 1 Y 1 R HIS 269 ? CE1 ? B HIS 150 CE1 49 1 Y 1 R HIS 269 ? NE2 ? B HIS 150 NE2 50 1 N 1 A NAG 1 ? O1 ? C NAG 1 O1 51 1 N 1 B NAG 1 ? O1 ? D NAG 1 O1 52 1 N 1 C NAG 1 ? O1 ? E NAG 1 O1 53 1 N 1 D NAG 1 ? O1 ? F NAG 1 O1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 E ALA 112 ? A ALA 1 2 1 Y 1 E HIS 216 ? A HIS 105 3 1 Y 1 E HIS 217 ? A HIS 106 4 1 Y 1 E HIS 218 ? A HIS 107 5 1 Y 1 E HIS 219 ? A HIS 108 6 1 Y 1 E HIS 220 ? A HIS 109 7 1 Y 1 E HIS 221 ? A HIS 110 8 1 Y 1 R ASP 120 ? B ASP 1 9 1 Y 1 R TYR 121 ? B TYR 2 10 1 Y 1 R SER 128 ? B SER 9 11 1 Y 1 R VAL 129 ? B VAL 10 12 1 Y 1 R ASP 206 ? B ASP 87 13 1 Y 1 R GLU 207 ? B GLU 88 14 1 Y 1 R ASP 327 ? B ASP 208 15 1 Y 1 R PRO 328 ? B PRO 209 16 1 Y 1 R ILE 329 ? B ILE 210 17 1 Y 1 R GLU 330 ? B GLU 211 18 1 Y 1 R GLY 331 ? B GLY 212 19 1 Y 1 R ARG 332 ? B ARG 213 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HG HG HG N N 161 HIS N N N N 162 HIS CA C N S 163 HIS C C N N 164 HIS O O N N 165 HIS CB C N N 166 HIS CG C Y N 167 HIS ND1 N Y N 168 HIS CD2 C Y N 169 HIS CE1 C Y N 170 HIS NE2 N Y N 171 HIS OXT O N N 172 HIS H H N N 173 HIS H2 H N N 174 HIS HA H N N 175 HIS HB2 H N N 176 HIS HB3 H N N 177 HIS HD1 H N N 178 HIS HD2 H N N 179 HIS HE1 H N N 180 HIS HE2 H N N 181 HIS HXT H N N 182 HOH O O N N 183 HOH H1 H N N 184 HOH H2 H N N 185 ILE N N N N 186 ILE CA C N S 187 ILE C C N N 188 ILE O O N N 189 ILE CB C N S 190 ILE CG1 C N N 191 ILE CG2 C N N 192 ILE CD1 C N N 193 ILE OXT O N N 194 ILE H H N N 195 ILE H2 H N N 196 ILE HA H N N 197 ILE HB H N N 198 ILE HG12 H N N 199 ILE HG13 H N N 200 ILE HG21 H N N 201 ILE HG22 H N N 202 ILE HG23 H N N 203 ILE HD11 H N N 204 ILE HD12 H N N 205 ILE HD13 H N N 206 ILE HXT H N N 207 LEU N N N N 208 LEU CA C N S 209 LEU C C N N 210 LEU O O N N 211 LEU CB C N N 212 LEU CG C N N 213 LEU CD1 C N N 214 LEU CD2 C N N 215 LEU OXT O N N 216 LEU H H N N 217 LEU H2 H N N 218 LEU HA H N N 219 LEU HB2 H N N 220 LEU HB3 H N N 221 LEU HG H N N 222 LEU HD11 H N N 223 LEU HD12 H N N 224 LEU HD13 H N N 225 LEU HD21 H N N 226 LEU HD22 H N N 227 LEU HD23 H N N 228 LEU HXT H N N 229 LYS N N N N 230 LYS CA C N S 231 LYS C C N N 232 LYS O O N N 233 LYS CB C N N 234 LYS CG C N N 235 LYS CD C N N 236 LYS CE C N N 237 LYS NZ N N N 238 LYS OXT O N N 239 LYS H H N N 240 LYS H2 H N N 241 LYS HA H N N 242 LYS HB2 H N N 243 LYS HB3 H N N 244 LYS HG2 H N N 245 LYS HG3 H N N 246 LYS HD2 H N N 247 LYS HD3 H N N 248 LYS HE2 H N N 249 LYS HE3 H N N 250 LYS HZ1 H N N 251 LYS HZ2 H N N 252 LYS HZ3 H N N 253 LYS HXT H N N 254 MET N N N N 255 MET CA C N S 256 MET C C N N 257 MET O O N N 258 MET CB C N N 259 MET CG C N N 260 MET SD S N N 261 MET CE C N N 262 MET OXT O N N 263 MET H H N N 264 MET H2 H N N 265 MET HA H N N 266 MET HB2 H N N 267 MET HB3 H N N 268 MET HG2 H N N 269 MET HG3 H N N 270 MET HE1 H N N 271 MET HE2 H N N 272 MET HE3 H N N 273 MET HXT H N N 274 NAG C1 C N R 275 NAG C2 C N R 276 NAG C3 C N R 277 NAG C4 C N S 278 NAG C5 C N R 279 NAG C6 C N N 280 NAG C7 C N N 281 NAG C8 C N N 282 NAG N2 N N N 283 NAG O1 O N N 284 NAG O3 O N N 285 NAG O4 O N N 286 NAG O5 O N N 287 NAG O6 O N N 288 NAG O7 O N N 289 NAG H1 H N N 290 NAG H2 H N N 291 NAG H3 H N N 292 NAG H4 H N N 293 NAG H5 H N N 294 NAG H61 H N N 295 NAG H62 H N N 296 NAG H81 H N N 297 NAG H82 H N N 298 NAG H83 H N N 299 NAG HN2 H N N 300 NAG HO1 H N N 301 NAG HO3 H N N 302 NAG HO4 H N N 303 NAG HO6 H N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TRP N N N N 376 TRP CA C N S 377 TRP C C N N 378 TRP O O N N 379 TRP CB C N N 380 TRP CG C Y N 381 TRP CD1 C Y N 382 TRP CD2 C Y N 383 TRP NE1 N Y N 384 TRP CE2 C Y N 385 TRP CE3 C Y N 386 TRP CZ2 C Y N 387 TRP CZ3 C Y N 388 TRP CH2 C Y N 389 TRP OXT O N N 390 TRP H H N N 391 TRP H2 H N N 392 TRP HA H N N 393 TRP HB2 H N N 394 TRP HB3 H N N 395 TRP HD1 H N N 396 TRP HE1 H N N 397 TRP HE3 H N N 398 TRP HZ2 H N N 399 TRP HZ3 H N N 400 TRP HH2 H N N 401 TRP HXT H N N 402 TYR N N N N 403 TYR CA C N S 404 TYR C C N N 405 TYR O O N N 406 TYR CB C N N 407 TYR CG C Y N 408 TYR CD1 C Y N 409 TYR CD2 C Y N 410 TYR CE1 C Y N 411 TYR CE2 C Y N 412 TYR CZ C Y N 413 TYR OH O N N 414 TYR OXT O N N 415 TYR H H N N 416 TYR H2 H N N 417 TYR HA H N N 418 TYR HB2 H N N 419 TYR HB3 H N N 420 TYR HD1 H N N 421 TYR HD2 H N N 422 TYR HE1 H N N 423 TYR HE2 H N N 424 TYR HH H N N 425 TYR HXT H N N 426 VAL N N N N 427 VAL CA C N S 428 VAL C C N N 429 VAL O O N N 430 VAL CB C N N 431 VAL CG1 C N N 432 VAL CG2 C N N 433 VAL OXT O N N 434 VAL H H N N 435 VAL H2 H N N 436 VAL HA H N N 437 VAL HB H N N 438 VAL HG11 H N N 439 VAL HG12 H N N 440 VAL HG13 H N N 441 VAL HG21 H N N 442 VAL HG22 H N N 443 VAL HG23 H N N 444 VAL HXT H N N 445 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 NAG C1 C2 sing N N 261 NAG C1 O1 sing N N 262 NAG C1 O5 sing N N 263 NAG C1 H1 sing N N 264 NAG C2 C3 sing N N 265 NAG C2 N2 sing N N 266 NAG C2 H2 sing N N 267 NAG C3 C4 sing N N 268 NAG C3 O3 sing N N 269 NAG C3 H3 sing N N 270 NAG C4 C5 sing N N 271 NAG C4 O4 sing N N 272 NAG C4 H4 sing N N 273 NAG C5 C6 sing N N 274 NAG C5 O5 sing N N 275 NAG C5 H5 sing N N 276 NAG C6 O6 sing N N 277 NAG C6 H61 sing N N 278 NAG C6 H62 sing N N 279 NAG C7 C8 sing N N 280 NAG C7 N2 sing N N 281 NAG C7 O7 doub N N 282 NAG C8 H81 sing N N 283 NAG C8 H82 sing N N 284 NAG C8 H83 sing N N 285 NAG N2 HN2 sing N N 286 NAG O1 HO1 sing N N 287 NAG O3 HO3 sing N N 288 NAG O4 HO4 sing N N 289 NAG O6 HO6 sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 A NAG 1 E NAG 1216 n C 3 NAG 2 A NAG 2 E NAG 1217 n C 3 BMA 3 A BMA 3 E BMA 1218 n D 3 NAG 1 B NAG 1 E NAG 1219 n D 3 NAG 2 B NAG 2 E NAG 1220 n D 3 BMA 3 B BMA 3 E BMA 1221 n E 4 NAG 1 C NAG 1 R NAG 1328 n E 4 NAG 2 C NAG 2 R NAG 1329 n F 4 NAG 1 D NAG 1 R NAG 1331 n F 4 NAG 2 D NAG 2 R NAG 1332 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 3 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}' LINUCS PDB-CARE ? 4 4 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 4 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 4 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 4 NAG 1 n 4 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MERCURY (II) ION' HG 6 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2X1W _pdbx_initial_refinement_model.details 'PDB ENTRY 2X1W' #