HEADER OXIDOREDUCTASE 10-JAN-10 2X22 TITLE CRYSTAL STRUCTURE OF M. TUBERCULOSIS INHA INHIBITED BY PT70 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NADH-DEPENDENT ENOYL-ACP REDUCTASE, ENOYL REDUCTASE; COMPND 5 EC: 1.3.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS KEYWDS FATTY ACID BIOSYNTHESIS, OXIDOREDUCTASE, LIPID SYNTHESIS, ANTIBIOTIC KEYWDS 2 RESISTANCE EXPDTA X-RAY DIFFRACTION AUTHOR S.R.LUCKNER,N.LIU,C.W.AM ENDE,P.J.TONGE,C.KISKER REVDAT 4 20-DEC-23 2X22 1 REMARK REVDAT 3 12-MAY-10 2X22 1 JRNL REVDAT 2 09-MAR-10 2X22 1 JRNL REVDAT 1 02-MAR-10 2X22 0 JRNL AUTH S.R.LUCKNER,N.LIU,C.W.AM ENDE,P.J.TONGE,C.KISKER JRNL TITL A SLOW, TIGHT BINDING INHIBITOR OF INHA, THE ENOYL-ACYL JRNL TITL 2 CARRIER PROTEIN REDUCTASE FROM MYCOBACTERIUM TUBERCULOSIS. JRNL REF J.BIOL.CHEM. V. 285 14330 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20200152 JRNL DOI 10.1074/JBC.M109.090373 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 91.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 35508 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1869 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2290 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 116 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 138 REMARK 3 SOLVENT ATOMS : 143 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.94000 REMARK 3 B22 (A**2) : -0.76000 REMARK 3 B33 (A**2) : -0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.181 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.163 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.104 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4298 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5862 ; 1.465 ; 2.008 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 559 ; 6.065 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 164 ;35.971 ;23.780 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 691 ;16.737 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;21.318 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 671 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3211 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2137 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2904 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 218 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 119 ; 0.218 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.199 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2775 ; 3.474 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4300 ; 4.210 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1769 ; 6.312 ; 5.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1549 ; 8.434 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2X22 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1290042386. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU IMAGE PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37379 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 36.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.410 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.89 REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.720 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2B37 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12-16% (W/V) PEG4000, 1% DMSO, 100MM REMARK 280 ADA PH 6.8, 250MM AMMONIUM ACETATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.61450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.61450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.90300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 78.75650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.90300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 78.75650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.61450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.90300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 78.75650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.61450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.90300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 78.75650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -126.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 45.61450 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2011 O HOH A 2019 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 185 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 185 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 42 -64.21 74.53 REMARK 500 ALA A 124 -54.97 -122.55 REMARK 500 ASP A 150 107.03 -47.46 REMARK 500 ALA A 157 -39.79 68.57 REMARK 500 ASN A 159 -122.05 47.00 REMARK 500 ARG A 195 80.32 -68.21 REMARK 500 ALA A 260 68.42 -102.42 REMARK 500 ASP B 42 -59.88 70.88 REMARK 500 ALA B 124 -57.38 -123.01 REMARK 500 ASP B 150 109.17 -43.44 REMARK 500 ALA B 157 -38.27 75.19 REMARK 500 ASN B 159 -122.07 39.03 REMARK 500 ALA B 260 72.25 -108.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 2-(O-TOLYLOXY)-5-HEXYLPHENOL (TCU): TRICLOSAN DERIVATIVE REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 1270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 1270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TCU A 1271 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TCU B 1271 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1272 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1273 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2H7M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ENOYLREDUCTASE REMARK 900 (INHA) COMPLEXED WITH 1- CYCLOHEXYL-N-(3,5-DICHLOROPHENYL)-5- REMARK 900 OXOPYRROLIDINE-3-CARBOXAMIDE REMARK 900 RELATED ID: 2AQI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ISONIAZID-RESISTANT I47T ENOYL-ACP(COA) REMARK 900 REDUCTASE MUTANT ENZYME FROM MYCOBACTERIUMTUBERCULOSIS IN COMPLEX REMARK 900 WITH NADH REMARK 900 RELATED ID: 2H7P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ENOYLREDUCTASE REMARK 900 (INHA) COMPLEXED WITH N-(3- CHLORO-2-METHYLPHENYL)-1-CYCLOHEXYL- 5- REMARK 900 OXOPYRROLIDINE-3-CARBOXAMIDE REMARK 900 RELATED ID: 2B36 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ENOYLREDUCTASE REMARK 900 (INHA) INHIBITED BY 5-PENTYL -2-PHENOXYPHENOL REMARK 900 RELATED ID: 1BVR RELATED DB: PDB REMARK 900 M.TB. ENOYL-ACP REDUCTASE (INHA) IN COMPLEX WITH NAD+ AND C16-FATTY- REMARK 900 ACYL- SUBSTRATE REMARK 900 RELATED ID: 2AQK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ISONIAZID-RESISTANT S94A ENOYL-ACP(COA) REMARK 900 REDUCTASE MUTANT ENZYME FROM MYCOBACTERIUMTUBERCULOSIS IN COMPLEX REMARK 900 WITH NADH REMARK 900 RELATED ID: 2B35 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ENOYLREDUCTASE REMARK 900 (INHA) INHIBITED BY TRICLOSAN REMARK 900 RELATED ID: 2H7I RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ENOYLREDUCTASE REMARK 900 (INHA) COMPLEXED WITH 1- CYCLOHEXYL-5-OXO-N-PHENYLPYRROLIDINE-3- REMARK 900 CARBOXAMIDE REMARK 900 RELATED ID: 1ZID RELATED DB: PDB REMARK 900 LONG FATTY ACID CHAIN ENOYL-ACP REDUCTASE ( INHA) IN COMPLEX WITH REMARK 900 AN ISONICOTINIC-ACYL- NADH INHIBITOR REMARK 900 RELATED ID: 1P45 RELATED DB: PDB REMARK 900 TARGETING TUBERCULOSIS AND MALARIA THROUGH INHIBITION OFENOYL REMARK 900 REDUCTASE: COMPOUND ACTIVITY AND STRUCTURAL DATA REMARK 900 RELATED ID: 1ENZ RELATED DB: PDB REMARK 900 RELATED ID: 1P44 RELATED DB: PDB REMARK 900 TARGETING TUBERCULOSIS AND MALARIA THROUGH INHIBITION OFENOYL REMARK 900 REDUCTASE: COMPOUND ACTIVITY AND STRUCTURAL DATA REMARK 900 RELATED ID: 1ENY RELATED DB: PDB REMARK 900 RELATED ID: 2B37 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ENOYLREDUCTASE REMARK 900 (INHA) INHIBITED BY 5-OCTYL- 2-PHENOXYPHENOL REMARK 900 RELATED ID: 2NV6 RELATED DB: PDB REMARK 900 MYCOBACTERIUM TUBERCULOSIS INHA (S94A) BOUND WITH INH-NADADDUCT REMARK 900 RELATED ID: 2X23 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF M. TUBERCULOSIS INHA INHIBITED BY PT70 DBREF 2X22 A 1 269 UNP P0A5Y6 INHA_MYCTU 1 269 DBREF 2X22 B 1 269 UNP P0A5Y6 INHA_MYCTU 1 269 SEQRES 1 A 269 MET THR GLY LEU LEU ASP GLY LYS ARG ILE LEU VAL SER SEQRES 2 A 269 GLY ILE ILE THR ASP SER SER ILE ALA PHE HIS ILE ALA SEQRES 3 A 269 ARG VAL ALA GLN GLU GLN GLY ALA GLN LEU VAL LEU THR SEQRES 4 A 269 GLY PHE ASP ARG LEU ARG LEU ILE GLN ARG ILE THR ASP SEQRES 5 A 269 ARG LEU PRO ALA LYS ALA PRO LEU LEU GLU LEU ASP VAL SEQRES 6 A 269 GLN ASN GLU GLU HIS LEU ALA SER LEU ALA GLY ARG VAL SEQRES 7 A 269 THR GLU ALA ILE GLY ALA GLY ASN LYS LEU ASP GLY VAL SEQRES 8 A 269 VAL HIS SER ILE GLY PHE MET PRO GLN THR GLY MET GLY SEQRES 9 A 269 ILE ASN PRO PHE PHE ASP ALA PRO TYR ALA ASP VAL SER SEQRES 10 A 269 LYS GLY ILE HIS ILE SER ALA TYR SER TYR ALA SER MET SEQRES 11 A 269 ALA LYS ALA LEU LEU PRO ILE MET ASN PRO GLY GLY SER SEQRES 12 A 269 ILE VAL GLY MET ASP PHE ASP PRO SER ARG ALA MET PRO SEQRES 13 A 269 ALA TYR ASN TRP MET THR VAL ALA LYS SER ALA LEU GLU SEQRES 14 A 269 SER VAL ASN ARG PHE VAL ALA ARG GLU ALA GLY LYS TYR SEQRES 15 A 269 GLY VAL ARG SER ASN LEU VAL ALA ALA GLY PRO ILE ARG SEQRES 16 A 269 THR LEU ALA MET SER ALA ILE VAL GLY GLY ALA LEU GLY SEQRES 17 A 269 GLU GLU ALA GLY ALA GLN ILE GLN LEU LEU GLU GLU GLY SEQRES 18 A 269 TRP ASP GLN ARG ALA PRO ILE GLY TRP ASN MET LYS ASP SEQRES 19 A 269 ALA THR PRO VAL ALA LYS THR VAL CYS ALA LEU LEU SER SEQRES 20 A 269 ASP TRP LEU PRO ALA THR THR GLY ASP ILE ILE TYR ALA SEQRES 21 A 269 ASP GLY GLY ALA HIS THR GLN LEU LEU SEQRES 1 B 269 MET THR GLY LEU LEU ASP GLY LYS ARG ILE LEU VAL SER SEQRES 2 B 269 GLY ILE ILE THR ASP SER SER ILE ALA PHE HIS ILE ALA SEQRES 3 B 269 ARG VAL ALA GLN GLU GLN GLY ALA GLN LEU VAL LEU THR SEQRES 4 B 269 GLY PHE ASP ARG LEU ARG LEU ILE GLN ARG ILE THR ASP SEQRES 5 B 269 ARG LEU PRO ALA LYS ALA PRO LEU LEU GLU LEU ASP VAL SEQRES 6 B 269 GLN ASN GLU GLU HIS LEU ALA SER LEU ALA GLY ARG VAL SEQRES 7 B 269 THR GLU ALA ILE GLY ALA GLY ASN LYS LEU ASP GLY VAL SEQRES 8 B 269 VAL HIS SER ILE GLY PHE MET PRO GLN THR GLY MET GLY SEQRES 9 B 269 ILE ASN PRO PHE PHE ASP ALA PRO TYR ALA ASP VAL SER SEQRES 10 B 269 LYS GLY ILE HIS ILE SER ALA TYR SER TYR ALA SER MET SEQRES 11 B 269 ALA LYS ALA LEU LEU PRO ILE MET ASN PRO GLY GLY SER SEQRES 12 B 269 ILE VAL GLY MET ASP PHE ASP PRO SER ARG ALA MET PRO SEQRES 13 B 269 ALA TYR ASN TRP MET THR VAL ALA LYS SER ALA LEU GLU SEQRES 14 B 269 SER VAL ASN ARG PHE VAL ALA ARG GLU ALA GLY LYS TYR SEQRES 15 B 269 GLY VAL ARG SER ASN LEU VAL ALA ALA GLY PRO ILE ARG SEQRES 16 B 269 THR LEU ALA MET SER ALA ILE VAL GLY GLY ALA LEU GLY SEQRES 17 B 269 GLU GLU ALA GLY ALA GLN ILE GLN LEU LEU GLU GLU GLY SEQRES 18 B 269 TRP ASP GLN ARG ALA PRO ILE GLY TRP ASN MET LYS ASP SEQRES 19 B 269 ALA THR PRO VAL ALA LYS THR VAL CYS ALA LEU LEU SER SEQRES 20 B 269 ASP TRP LEU PRO ALA THR THR GLY ASP ILE ILE TYR ALA SEQRES 21 B 269 ASP GLY GLY ALA HIS THR GLN LEU LEU HET NAD A1270 44 HET TCU A1271 21 HET DMS A1272 4 HET DMS A1273 4 HET NAD B1270 44 HET TCU B1271 21 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM TCU 5-HEXYL-2-(2-METHYLPHENOXY)PHENOL HETNAM DMS DIMETHYL SULFOXIDE HETSYN TCU 2-(O-TOLYLOXY)-5-HEXYLPHENOL FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 TCU 2(C19 H24 O2) FORMUL 5 DMS 2(C2 H6 O S) FORMUL 9 HOH *143(H2 O) HELIX 1 1 SER A 20 GLN A 32 1 13 HELIX 2 2 ARG A 43 ASP A 52 1 10 HELIX 3 3 ASN A 67 GLY A 83 1 17 HELIX 4 4 PRO A 99 MET A 103 5 5 HELIX 5 5 PRO A 107 ALA A 111 5 5 HELIX 6 6 PRO A 112 ALA A 124 1 13 HELIX 7 7 ALA A 124 LEU A 135 1 12 HELIX 8 8 TYR A 158 TYR A 182 1 25 HELIX 9 9 THR A 196 ILE A 202 1 7 HELIX 10 10 ILE A 202 LEU A 207 1 6 HELIX 11 11 GLU A 210 ALA A 226 1 17 HELIX 12 12 ALA A 235 SER A 247 1 13 HELIX 13 13 GLY A 263 GLN A 267 5 5 HELIX 14 14 SER B 20 GLN B 32 1 13 HELIX 15 15 ARG B 43 ASP B 52 1 10 HELIX 16 16 ASN B 67 GLY B 83 1 17 HELIX 17 17 PRO B 99 MET B 103 5 5 HELIX 18 18 PRO B 107 ALA B 111 5 5 HELIX 19 19 PRO B 112 ALA B 124 1 13 HELIX 20 20 ALA B 124 LEU B 135 1 12 HELIX 21 21 TYR B 158 LYS B 181 1 24 HELIX 22 22 THR B 196 ALA B 201 1 6 HELIX 23 23 VAL B 203 LEU B 207 5 5 HELIX 24 24 GLU B 210 ALA B 226 1 17 HELIX 25 25 ALA B 235 SER B 247 1 13 HELIX 26 26 GLY B 263 GLN B 267 5 5 SHEET 1 AA 7 LEU A 60 GLU A 62 0 SHEET 2 AA 7 GLN A 35 GLY A 40 1 O LEU A 38 N LEU A 61 SHEET 3 AA 7 ARG A 9 SER A 13 1 O ILE A 10 N VAL A 37 SHEET 4 AA 7 LEU A 88 HIS A 93 1 N ASP A 89 O ARG A 9 SHEET 5 AA 7 MET A 138 ASP A 148 1 N ASN A 139 O LEU A 88 SHEET 6 AA 7 ARG A 185 ALA A 191 1 O ARG A 185 N ILE A 144 SHEET 7 AA 7 ASP A 256 ALA A 260 1 O ASP A 256 N LEU A 188 SHEET 1 BA 7 LEU B 60 GLU B 62 0 SHEET 2 BA 7 GLN B 35 GLY B 40 1 O LEU B 38 N LEU B 61 SHEET 3 BA 7 ARG B 9 SER B 13 1 O ILE B 10 N VAL B 37 SHEET 4 BA 7 LEU B 88 HIS B 93 1 N ASP B 89 O ARG B 9 SHEET 5 BA 7 MET B 138 ASP B 148 1 N ASN B 139 O LEU B 88 SHEET 6 BA 7 ARG B 185 ALA B 191 1 O ARG B 185 N ILE B 144 SHEET 7 BA 7 ASP B 256 ALA B 260 1 O ASP B 256 N LEU B 188 SITE 1 AC1 31 GLY A 14 ILE A 15 ILE A 16 SER A 20 SITE 2 AC1 31 ILE A 21 PHE A 41 LEU A 63 ASP A 64 SITE 3 AC1 31 VAL A 65 SER A 94 ILE A 95 GLY A 96 SITE 4 AC1 31 ILE A 122 MET A 147 ASP A 148 PHE A 149 SITE 5 AC1 31 LYS A 165 ALA A 191 GLY A 192 PRO A 193 SITE 6 AC1 31 ILE A 194 THR A 196 ALA A 198 MET A 199 SITE 7 AC1 31 TCU A1271 HOH A2051 HOH A2066 HOH A2067 SITE 8 AC1 31 HOH A2068 HOH A2069 HOH A2070 SITE 1 AC2 30 GLY B 14 ILE B 15 ILE B 16 SER B 20 SITE 2 AC2 30 ILE B 21 PHE B 41 LEU B 63 ASP B 64 SITE 3 AC2 30 VAL B 65 SER B 94 ILE B 95 GLY B 96 SITE 4 AC2 30 ILE B 122 MET B 147 ASP B 148 LYS B 165 SITE 5 AC2 30 ALA B 191 GLY B 192 PRO B 193 ILE B 194 SITE 6 AC2 30 THR B 196 ALA B 198 TCU B1271 HOH B2002 SITE 7 AC2 30 HOH B2032 HOH B2069 HOH B2070 HOH B2071 SITE 8 AC2 30 HOH B2072 HOH B2073 SITE 1 AC3 9 GLY A 96 PHE A 97 ALA A 157 TYR A 158 SITE 2 AC3 9 MET A 161 ALA A 198 MET A 199 VAL A 203 SITE 3 AC3 9 NAD A1270 SITE 1 AC4 8 GLY B 96 MET B 98 MET B 103 PHE B 149 SITE 2 AC4 8 TYR B 158 LYS B 165 VAL B 203 NAD B1270 SITE 1 AC5 6 SER A 19 HIS A 24 ILE A 194 LYS A 233 SITE 2 AC5 6 ASP A 234 ALA A 235 SITE 1 AC6 5 GLY A 85 ASN A 86 LYS A 87 ASN A 139 SITE 2 AC6 5 HOH A2020 CRYST1 89.806 157.513 91.229 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011135 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006349 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010961 0.00000 MTRIX1 1 0.305540 -0.016100 -0.952040 21.28520 1 MTRIX2 1 -0.010450 -0.999850 0.013550 -46.11066 1 MTRIX3 1 -0.952120 0.005810 -0.305670 29.90835 1