data_2X2Q # _entry.id 2X2Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2X2Q pdb_00002x2q 10.2210/pdb2x2q/pdb PDBE EBI-41998 ? ? WWPDB D_1290041998 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2X2Q _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-01-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Eichert, A.' 1 'Behling, K.' 2 'Fuerste, J.P.' 3 'Betzel, C.' 4 'Erdmann, V.A.' 5 'Foerster, C.' 6 # _citation.id primary _citation.title ;The Crystal Structure of an 'All Locked' Nucleic Acid Duplex. ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 38 _citation.page_first 6729 _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20530536 _citation.pdbx_database_id_DOI 10.1093/NAR/GKQ505 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Eichert, A.' 1 ? primary 'Behling, K.' 2 ? primary 'Betzel, C.' 3 ? primary 'Erdmann, V.A.' 4 ? primary 'Furste, J.P.' 5 ? primary 'Forster, C.' 6 ? # _cell.entry_id 2X2Q _cell.length_a 77.913 _cell.length_b 40.737 _cell.length_c 30.059 _cell.angle_alpha 90.00 _cell.angle_beta 91.02 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X2Q _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'LOCKED NUCLEIC ACID DERIVED FROM TRNA SER ACCEPTOR STEM MICROHELIX' 2284.557 2 ? ? ? ? 2 polymer syn 'LOCKED NUCLEIC ACID DERIVED FROM TRNA SER ACCEPTOR STEM MICROHELIX' 2414.542 2 ? ? ? ? 3 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 non-polymer syn 'CACODYLATE ION' 136.989 1 ? ? ? ? 6 water nat water 18.015 100 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes '(LCC)(LCC)(TLN)(LCC)(LCA)(LCC)(LCC)' NNUNANN A,C ? 2 polyribonucleotide no yes '(LCG)(LCG)(TLN)(LCG)(LCA)(LCG)(LCG)' GGUGAGG B,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LCC n 1 2 LCC n 1 3 TLN n 1 4 LCC n 1 5 LCA n 1 6 LCC n 1 7 LCC n 2 1 LCG n 2 2 LCG n 2 3 TLN n 2 4 LCG n 2 5 LCA n 2 6 LCG n 2 7 LCG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? 2 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2X2Q 1 ? ? 2X2Q ? 2 PDB 2X2Q 2 ? ? 2X2Q ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2X2Q A 1 ? 7 ? 2X2Q 66 ? 72 ? 66 72 2 2 2X2Q B 1 ? 7 ? 2X2Q 1 ? 7 ? 1 7 3 1 2X2Q C 1 ? 7 ? 2X2Q 66 ? 72 ? 66 72 4 2 2X2Q D 1 ? 7 ? 2X2Q 1 ? 7 ? 1 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CAC non-polymer . 'CACODYLATE ION' dimethylarsinate 'C2 H6 As O2 -1' 136.989 HOH non-polymer . WATER ? 'H2 O' 18.015 LCA 'RNA linking' n '[(1R,3R,4R,7S)-7-HYDROXY-3-(ADENIN-9-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE' ? 'C11 H14 N5 O7 P' 359.232 LCC 'RNA linking' . '[(1R,3R,4R,7S)-7-HYDROXY-3-(5-METHYLCYTOSIN-1-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE' ? 'C11 H16 N3 O8 P' 349.234 LCG 'RNA linking' n '[(1R,3R,4R,7S)-7-HYDROXY-3-(GUANIN-9-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE' ? 'C11 H14 N5 O8 P' 375.231 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 TLN 'RNA linking' n '[(1R,3R,4R,7S)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE' ? 'C11 H15 N2 O9 P' 350.219 # _exptl.entry_id 2X2Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_percent_sol 66.5 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;40 MM SODIUM CACODYLATE (PH 5.5), 20 MM COBALT HEXAMMINE, 80 MM SODIUM CHLORIDE, 20 MM MAGNESIUM CHLORIDE, 10% (V/V) MPD EQILIBRATED AGAINST 35% (V/V) MPD (PH 7.4) ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2009-05-08 _diffrn_detector.details 'MIRRORS, COLLIMATING AND FOCUSING, PT-COATED' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL SI111 OR WHITE BEAM' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ELETTRA BEAMLINE 5.2R' _diffrn_source.pdbx_synchrotron_site ELETTRA _diffrn_source.pdbx_synchrotron_beamline 5.2R _diffrn_source.pdbx_wavelength 1.000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2X2Q _reflns.observed_criterion_sigma_I 1.5 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.95 _reflns.d_resolution_high 1.90 _reflns.number_obs 7382 _reflns.number_all ? _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 97.2 _reflns_shell.Rmerge_I_obs 0.22 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.00 _reflns_shell.pdbx_redundancy 3.8 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2X2Q _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7030 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.95 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 98.05 _refine.ls_R_factor_obs 0.22551 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22353 _refine.ls_R_factor_R_free 0.26370 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 352 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.950 _refine.B_iso_mean 32.235 _refine.aniso_B[1][1] -3.13 _refine.aniso_B[2][2] -0.73 _refine.aniso_B[3][3] 3.86 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.11 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model 'PDB ENTRY 3GVN' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.186 _refine.pdbx_overall_ESU_R_Free 0.167 _refine.overall_SU_ML 0.159 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.599 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 628 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 741 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 38.95 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.020 ? 732 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3.371 3.552 ? 1199 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.122 0.200 ? 137 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 304 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.861 3.000 ? 732 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.331 4.500 ? 1199 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 152 0.09 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 C 152 0.09 0.05 'tight positional' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 B 162 0.09 0.05 'tight positional' 2 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 D 162 0.09 0.05 'tight positional' 2 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 152 0.41 0.50 'tight thermal' 1 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 C 152 0.41 0.50 'tight thermal' 1 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 B 162 0.42 0.50 'tight thermal' 2 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 D 162 0.42 0.50 'tight thermal' 2 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.901 _refine_ls_shell.d_res_low 1.951 _refine_ls_shell.number_reflns_R_work 507 _refine_ls_shell.R_factor_R_work 0.328 _refine_ls_shell.percent_reflns_obs 96.93 _refine_ls_shell.R_factor_R_free 0.293 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 29 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 C 1 1 B 2 2 D 2 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 A 1 A 7 1 1 ? ? ? ? ? ? ? ? 1 ? ? ? 2 C 1 C 7 1 1 ? ? ? ? ? ? ? ? 1 ? ? ? 1 B 8 B 14 1 1 ? ? ? ? ? ? ? ? 2 ? ? ? 2 D 8 D 14 1 1 ? ? ? ? ? ? ? ? 2 ? ? ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 2X2Q _struct.title ;Crystal structure of an 'all locked' LNA duplex at 1.9 angstrom resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2X2Q _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA, MODIFIED NUCLEIC ACID, LOCKED NUCLEIC ACID, THERMOSTABILITY' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LCC 1 "O3'" ? ? ? 1_555 A LCC 2 P ? ? A LCC 66 A LCC 67 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? A LCC 2 "O3'" ? ? ? 1_555 A TLN 3 P ? ? A LCC 67 A TLN 68 1_555 ? ? ? ? ? ? ? 1.579 ? ? covale3 covale both ? A TLN 3 "O3'" ? ? ? 1_555 A LCC 4 P ? ? A TLN 68 A LCC 69 1_555 ? ? ? ? ? ? ? 1.582 ? ? covale4 covale both ? A LCC 4 "O3'" ? ? ? 1_555 A LCA 5 P ? ? A LCC 69 A LCA 70 1_555 ? ? ? ? ? ? ? 1.586 ? ? covale5 covale one ? A LCA 5 "O3'" ? ? ? 1_555 A LCC 6 P ? ? A LCA 70 A LCC 71 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale6 covale both ? A LCC 6 "O3'" ? ? ? 1_555 A LCC 7 P ? ? A LCC 71 A LCC 72 1_555 ? ? ? ? ? ? ? 1.582 ? ? covale7 covale both ? B LCG 1 "O3'" ? ? ? 1_555 B LCG 2 P ? ? B LCG 1 B LCG 2 1_555 ? ? ? ? ? ? ? 1.573 ? ? covale8 covale both ? B LCG 2 "O3'" ? ? ? 1_555 B TLN 3 P ? ? B LCG 2 B TLN 3 1_555 ? ? ? ? ? ? ? 1.568 ? ? covale9 covale both ? B TLN 3 "O3'" ? ? ? 1_555 B LCG 4 P ? ? B TLN 3 B LCG 4 1_555 ? ? ? ? ? ? ? 1.560 ? ? covale10 covale both ? B LCG 4 "O3'" ? ? ? 1_555 B LCA 5 P ? ? B LCG 4 B LCA 5 1_555 ? ? ? ? ? ? ? 1.582 ? ? covale11 covale one ? B LCA 5 "O3'" ? ? ? 1_555 B LCG 6 P ? ? B LCA 5 B LCG 6 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale12 covale both ? B LCG 6 "O3'" ? ? ? 1_555 B LCG 7 P ? ? B LCG 6 B LCG 7 1_555 ? ? ? ? ? ? ? 1.577 ? ? covale13 covale both ? C LCC 1 "O3'" ? ? ? 1_555 C LCC 2 P ? ? C LCC 66 C LCC 67 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale14 covale both ? C LCC 2 "O3'" ? ? ? 1_555 C TLN 3 P ? ? C LCC 67 C TLN 68 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale15 covale both ? C TLN 3 "O3'" ? ? ? 1_555 C LCC 4 P ? ? C TLN 68 C LCC 69 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale16 covale both ? C LCC 4 "O3'" ? ? ? 1_555 C LCA 5 P ? ? C LCC 69 C LCA 70 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale17 covale one ? C LCA 5 "O3'" ? ? ? 1_555 C LCC 6 P ? ? C LCA 70 C LCC 71 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale18 covale both ? C LCC 6 "O3'" ? ? ? 1_555 C LCC 7 P ? ? C LCC 71 C LCC 72 1_555 ? ? ? ? ? ? ? 1.570 ? ? covale19 covale both ? D LCG 1 "O3'" ? ? ? 1_555 D LCG 2 P ? ? D LCG 1 D LCG 2 1_555 ? ? ? ? ? ? ? 1.565 ? ? covale20 covale both ? D LCG 2 "O3'" ? ? ? 1_555 D TLN 3 P ? ? D LCG 2 D TLN 3 1_555 ? ? ? ? ? ? ? 1.586 ? ? covale21 covale both ? D TLN 3 "O3'" ? ? ? 1_555 D LCG 4 P ? ? D TLN 3 D LCG 4 1_555 ? ? ? ? ? ? ? 1.575 ? ? covale22 covale both ? D LCG 4 "O3'" ? ? ? 1_555 D LCA 5 P ? ? D LCG 4 D LCA 5 1_555 ? ? ? ? ? ? ? 1.586 ? ? covale23 covale one ? D LCA 5 "O3'" ? ? ? 1_555 D LCG 6 P ? ? D LCA 5 D LCG 6 1_555 ? ? ? ? ? ? ? 1.559 ? ? covale24 covale both ? D LCG 6 "O3'" ? ? ? 1_555 D LCG 7 P ? ? D LCG 6 D LCG 7 1_555 ? ? ? ? ? ? ? 1.579 ? ? metalc1 metalc ? ? C LCC 7 "O2'" ? ? ? 1_555 F MG . MG ? ? C LCC 72 C MG 101 1_555 ? ? ? ? ? ? ? 2.460 ? ? metalc2 metalc ? ? C LCC 7 "O2'" ? ? ? 1_555 F MG . MG ? ? C LCC 72 C MG 101 2_655 ? ? ? ? ? ? ? 2.523 ? ? metalc3 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? C MG 101 C HOH 201 1_555 ? ? ? ? ? ? ? 2.484 ? ? metalc4 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? C MG 101 C HOH 201 2_655 ? ? ? ? ? ? ? 2.341 ? ? metalc5 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? C MG 101 C HOH 207 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc6 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? C MG 101 C HOH 207 2_655 ? ? ? ? ? ? ? 2.913 ? ? hydrog1 hydrog ? ? A TLN 3 N3 ? ? ? 1_555 B LCA 5 N1 ? ? A TLN 68 B LCA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A TLN 3 O4 ? ? ? 1_555 B LCA 5 N6 ? ? A TLN 68 B LCA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A LCA 5 N1 ? ? ? 1_555 B TLN 3 N3 ? ? A LCA 70 B TLN 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A LCA 5 N6 ? ? ? 1_555 B TLN 3 O4 ? ? A LCA 70 B TLN 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C TLN 3 N3 ? ? ? 1_555 D LCA 5 N1 ? ? C TLN 68 D LCA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C TLN 3 O4 ? ? ? 1_555 D LCA 5 N6 ? ? C TLN 68 D LCA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C LCA 5 N1 ? ? ? 1_555 D TLN 3 N3 ? ? C LCA 70 D TLN 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C LCA 5 N6 ? ? ? 1_555 D TLN 3 O4 ? ? C LCA 70 D TLN 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B NCO 101 ? 8 'binding site for residue NCO B 101' AC2 Software C MG 101 ? 6 'binding site for residue MG C 101' AC3 Software D CAC 101 ? 3 'binding site for residue CAC D 101' AC4 Software A LCC 66 ? 8 'binding site for residues LCC A 66 and LCC A 67' AC5 Software A LCC 71 ? 15 'binding site for residues LCC A 71 and LCC A 72' AC6 Software C LCC 66 ? 6 'binding site for residues LCC C 66 and LCC C 67' AC7 Software C LCC 71 ? 14 'binding site for residues LCC C 71 and LCC C 72' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 LCG B 6 ? LCG B 6 . ? 1_555 ? 2 AC1 8 LCG B 7 ? LCG B 7 . ? 1_555 ? 3 AC1 8 HOH I . ? HOH B 210 . ? 1_555 ? 4 AC1 8 HOH I . ? HOH B 216 . ? 1_555 ? 5 AC1 8 LCG D 6 ? LCG D 6 . ? 1_555 ? 6 AC1 8 LCG D 7 ? LCG D 7 . ? 1_555 ? 7 AC1 8 HOH K . ? HOH D 212 . ? 1_555 ? 8 AC1 8 HOH K . ? HOH D 213 . ? 1_555 ? 9 AC2 6 LCC C 7 ? LCC C 72 . ? 2_655 ? 10 AC2 6 LCC C 7 ? LCC C 72 . ? 1_555 ? 11 AC2 6 HOH J . ? HOH C 201 . ? 2_655 ? 12 AC2 6 HOH J . ? HOH C 201 . ? 1_555 ? 13 AC2 6 HOH J . ? HOH C 207 . ? 1_555 ? 14 AC2 6 HOH J . ? HOH C 207 . ? 2_655 ? 15 AC3 3 LCG B 1 ? LCG B 1 . ? 4_556 ? 16 AC3 3 LCG B 2 ? LCG B 2 . ? 4_556 ? 17 AC3 3 HOH K . ? HOH D 203 . ? 1_555 ? 18 AC4 8 TLN A 3 ? TLN A 68 . ? 1_555 ? 19 AC4 8 HOH H . ? HOH A 103 . ? 1_555 ? 20 AC4 8 HOH H . ? HOH A 108 . ? 1_555 ? 21 AC4 8 LCG B 6 ? LCG B 6 . ? 1_555 ? 22 AC4 8 LCG B 7 ? LCG B 7 . ? 1_555 ? 23 AC4 8 LCC C 1 ? LCC C 66 . ? 1_555 ? 24 AC4 8 LCG D 7 ? LCG D 7 . ? 1_555 ? 25 AC4 8 HOH K . ? HOH D 209 . ? 1_555 ? 26 AC5 15 LCA A 5 ? LCA A 70 . ? 1_555 ? 27 AC5 15 HOH H . ? HOH A 101 . ? 1_555 ? 28 AC5 15 HOH H . ? HOH A 102 . ? 1_555 ? 29 AC5 15 HOH H . ? HOH A 104 . ? 1_555 ? 30 AC5 15 HOH H . ? HOH A 106 . ? 1_555 ? 31 AC5 15 HOH H . ? HOH A 106 . ? 2_555 ? 32 AC5 15 HOH H . ? HOH A 110 . ? 1_555 ? 33 AC5 15 HOH H . ? HOH A 113 . ? 1_555 ? 34 AC5 15 HOH H . ? HOH A 114 . ? 1_555 ? 35 AC5 15 LCG B 1 ? LCG B 1 . ? 1_555 ? 36 AC5 15 LCG B 2 ? LCG B 2 . ? 1_555 ? 37 AC5 15 LCG B 2 ? LCG B 2 . ? 2_555 ? 38 AC5 15 TLN B 3 ? TLN B 3 . ? 2_555 ? 39 AC5 15 TLN B 3 ? TLN B 3 . ? 1_555 ? 40 AC5 15 LCG D 1 ? LCG D 1 . ? 3_445 ? 41 AC6 6 LCC A 1 ? LCC A 66 . ? 1_555 ? 42 AC6 6 LCG B 7 ? LCG B 7 . ? 1_555 ? 43 AC6 6 TLN C 3 ? TLN C 68 . ? 1_555 ? 44 AC6 6 HOH J . ? HOH C 210 . ? 1_555 ? 45 AC6 6 LCG D 6 ? LCG D 6 . ? 1_555 ? 46 AC6 6 LCG D 7 ? LCG D 7 . ? 1_555 ? 47 AC7 14 LCG B 1 ? LCG B 1 . ? 3_555 ? 48 AC7 14 LCA C 5 ? LCA C 70 . ? 1_555 ? 49 AC7 14 MG F . ? MG C 101 . ? 1_555 ? 50 AC7 14 MG F . ? MG C 101 . ? 2_655 ? 51 AC7 14 HOH J . ? HOH C 201 . ? 1_555 ? 52 AC7 14 HOH J . ? HOH C 203 . ? 1_555 ? 53 AC7 14 HOH J . ? HOH C 205 . ? 1_555 ? 54 AC7 14 HOH J . ? HOH C 206 . ? 1_555 ? 55 AC7 14 HOH J . ? HOH C 207 . ? 1_555 ? 56 AC7 14 HOH J . ? HOH C 209 . ? 1_555 ? 57 AC7 14 LCG D 1 ? LCG D 1 . ? 1_555 ? 58 AC7 14 LCG D 2 ? LCG D 2 . ? 1_555 ? 59 AC7 14 TLN D 3 ? TLN D 3 . ? 1_555 ? 60 AC7 14 HOH K . ? HOH D 201 . ? 1_555 ? # _database_PDB_matrix.entry_id 2X2Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2X2Q _atom_sites.fract_transf_matrix[1][1] 0.012835 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000229 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024548 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.033273 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol AS C CO MG N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LCC 1 66 66 LCC LCC A . n A 1 2 LCC 2 67 67 LCC LCC A . n A 1 3 TLN 3 68 68 TLN TLN A . n A 1 4 LCC 4 69 69 LCC LCC A . n A 1 5 LCA 5 70 70 LCA LCA A . n A 1 6 LCC 6 71 71 LCC LCC A . n A 1 7 LCC 7 72 72 LCC LCC A . n B 2 1 LCG 1 1 1 LCG LCG B . n B 2 2 LCG 2 2 2 LCG LCG B . n B 2 3 TLN 3 3 3 TLN TLN B . n B 2 4 LCG 4 4 4 LCG LCG B . n B 2 5 LCA 5 5 5 LCA LCA B . n B 2 6 LCG 6 6 6 LCG LCG B . n B 2 7 LCG 7 7 7 LCG LCG B . n C 1 1 LCC 1 66 66 LCC LCC C . n C 1 2 LCC 2 67 67 LCC LCC C . n C 1 3 TLN 3 68 68 TLN TLN C . n C 1 4 LCC 4 69 69 LCC LCC C . n C 1 5 LCA 5 70 70 LCA LCA C . n C 1 6 LCC 6 71 71 LCC LCC C . n C 1 7 LCC 7 72 72 LCC LCC C . n D 2 1 LCG 1 1 1 LCG LCG D . n D 2 2 LCG 2 2 2 LCG LCG D . n D 2 3 TLN 3 3 3 TLN TLN D . n D 2 4 LCG 4 4 4 LCG LCG D . n D 2 5 LCA 5 5 5 LCA LCA D . n D 2 6 LCG 6 6 6 LCG LCG D . n D 2 7 LCG 7 7 7 LCG LCG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NCO 1 101 1008 NCO NCO B . F 4 MG 1 101 1008 MG MG C . G 5 CAC 1 101 1008 CAC CAC D . H 6 HOH 1 101 2018 HOH HOH A . H 6 HOH 2 102 2014 HOH HOH A . H 6 HOH 3 103 2004 HOH HOH A . H 6 HOH 4 104 2017 HOH HOH A . H 6 HOH 5 105 2011 HOH HOH A . H 6 HOH 6 106 2020 HOH HOH A . H 6 HOH 7 107 2010 HOH HOH A . H 6 HOH 8 108 2003 HOH HOH A . H 6 HOH 9 109 2008 HOH HOH A . H 6 HOH 10 110 2016 HOH HOH A . H 6 HOH 11 111 2007 HOH HOH A . H 6 HOH 12 112 2012 HOH HOH A . H 6 HOH 13 113 2015 HOH HOH A . H 6 HOH 14 114 2013 HOH HOH A . H 6 HOH 15 115 2006 HOH HOH A . H 6 HOH 16 116 2005 HOH HOH A . H 6 HOH 17 117 2009 HOH HOH A . H 6 HOH 18 118 2002 HOH HOH A . H 6 HOH 19 119 2019 HOH HOH A . H 6 HOH 20 120 2001 HOH HOH A . I 6 HOH 1 201 2014 HOH HOH B . I 6 HOH 2 202 2026 HOH HOH B . I 6 HOH 3 203 2024 HOH HOH B . I 6 HOH 4 204 2008 HOH HOH B . I 6 HOH 5 205 2018 HOH HOH B . I 6 HOH 6 206 2001 HOH HOH B . I 6 HOH 7 207 2016 HOH HOH B . I 6 HOH 8 208 2012 HOH HOH B . I 6 HOH 9 209 2020 HOH HOH B . I 6 HOH 10 210 2025 HOH HOH B . I 6 HOH 11 211 2009 HOH HOH B . I 6 HOH 12 212 2019 HOH HOH B . I 6 HOH 13 213 2028 HOH HOH B . I 6 HOH 14 214 2023 HOH HOH B . I 6 HOH 15 215 2027 HOH HOH B . I 6 HOH 16 216 2001 HOH HOH B . I 6 HOH 17 217 2021 HOH HOH B . I 6 HOH 18 218 2004 HOH HOH B . I 6 HOH 19 219 2015 HOH HOH B . I 6 HOH 20 220 2003 HOH HOH B . I 6 HOH 21 221 2002 HOH HOH B . I 6 HOH 22 222 2017 HOH HOH B . I 6 HOH 23 223 2007 HOH HOH B . I 6 HOH 24 224 2013 HOH HOH B . I 6 HOH 25 225 2022 HOH HOH B . I 6 HOH 26 226 2002 HOH HOH B . I 6 HOH 27 227 2011 HOH HOH B . I 6 HOH 28 228 2010 HOH HOH B . I 6 HOH 29 229 2005 HOH HOH B . I 6 HOH 30 230 2029 HOH HOH B . J 6 HOH 1 201 2012 HOH HOH C . J 6 HOH 2 202 2004 HOH HOH C . J 6 HOH 3 203 2013 HOH HOH C . J 6 HOH 4 204 2005 HOH HOH C . J 6 HOH 5 205 2010 HOH HOH C . J 6 HOH 6 206 2011 HOH HOH C . J 6 HOH 7 207 2015 HOH HOH C . J 6 HOH 8 208 2006 HOH HOH C . J 6 HOH 9 209 2009 HOH HOH C . J 6 HOH 10 210 2002 HOH HOH C . J 6 HOH 11 211 2007 HOH HOH C . J 6 HOH 12 212 2003 HOH HOH C . J 6 HOH 13 213 2014 HOH HOH C . J 6 HOH 14 214 2008 HOH HOH C . J 6 HOH 15 215 2001 HOH HOH C . J 6 HOH 16 216 2006 HOH HOH C . J 6 HOH 17 217 2016 HOH HOH C . K 6 HOH 1 201 2003 HOH HOH D . K 6 HOH 2 202 2019 HOH HOH D . K 6 HOH 3 203 2001 HOH HOH D . K 6 HOH 4 204 2027 HOH HOH D . K 6 HOH 5 205 2024 HOH HOH D . K 6 HOH 6 206 2017 HOH HOH D . K 6 HOH 7 207 2023 HOH HOH D . K 6 HOH 8 208 2015 HOH HOH D . K 6 HOH 9 209 2029 HOH HOH D . K 6 HOH 10 210 2013 HOH HOH D . K 6 HOH 11 211 2009 HOH HOH D . K 6 HOH 12 212 2025 HOH HOH D . K 6 HOH 13 213 2022 HOH HOH D . K 6 HOH 14 214 2026 HOH HOH D . K 6 HOH 15 215 2016 HOH HOH D . K 6 HOH 16 216 2004 HOH HOH D . K 6 HOH 17 217 2008 HOH HOH D . K 6 HOH 18 218 2002 HOH HOH D . K 6 HOH 19 219 2006 HOH HOH D . K 6 HOH 20 220 2014 HOH HOH D . K 6 HOH 21 221 2005 HOH HOH D . K 6 HOH 22 222 2012 HOH HOH D . K 6 HOH 23 223 2007 HOH HOH D . K 6 HOH 24 224 2028 HOH HOH D . K 6 HOH 25 225 2001 HOH HOH D . K 6 HOH 26 226 2020 HOH HOH D . K 6 HOH 27 227 2010 HOH HOH D . K 6 HOH 28 228 2018 HOH HOH D . K 6 HOH 29 229 2011 HOH HOH D . K 6 HOH 30 230 2030 HOH HOH D . K 6 HOH 31 231 2031 HOH HOH D . K 6 HOH 32 232 2021 HOH HOH D . K 6 HOH 33 233 2030 HOH HOH D . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A TLN 3 A TLN 68 ? DU ? 2 A LCA 5 A LCA 70 ? A ? 3 B LCG 1 B LCG 1 ? DG ? 4 B LCG 2 B LCG 2 ? DG ? 5 B TLN 3 B TLN 3 ? DU ? 6 B LCG 4 B LCG 4 ? DG ? 7 B LCA 5 B LCA 5 ? A ? 8 B LCG 6 B LCG 6 ? DG ? 9 B LCG 7 B LCG 7 ? DG ? 10 C TLN 3 C TLN 68 ? DU ? 11 C LCA 5 C LCA 70 ? A ? 12 D LCG 1 D LCG 1 ? DG ? 13 D LCG 2 D LCG 2 ? DG ? 14 D TLN 3 D TLN 3 ? DU ? 15 D LCG 4 D LCG 4 ? DG ? 16 D LCA 5 D LCA 5 ? A ? 17 D LCG 6 D LCG 6 ? DG ? 18 D LCG 7 D LCG 7 ? DG ? # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,H,I 2 1 C,D,F,G,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 0.0 ? 2 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 201 ? 1_555 89.8 ? 3 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 201 ? 1_555 89.8 ? 4 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 201 ? 2_655 170.8 ? 5 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 201 ? 2_655 170.8 ? 6 O ? J HOH . ? C HOH 201 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 201 ? 2_655 91.7 ? 7 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 1_555 82.3 ? 8 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 1_555 82.3 ? 9 O ? J HOH . ? C HOH 201 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 1_555 116.2 ? 10 O ? J HOH . ? C HOH 201 ? 2_655 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 1_555 105.1 ? 11 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 2_655 77.9 ? 12 "O2'" ? C LCC 7 ? C LCC 72 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 2_655 77.9 ? 13 O ? J HOH . ? C HOH 201 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 2_655 79.8 ? 14 O ? J HOH . ? C HOH 201 ? 2_655 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 2_655 93.4 ? 15 O ? J HOH . ? C HOH 207 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? J HOH . ? C HOH 207 ? 2_655 154.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-16 2 'Structure model' 1 1 2011-05-07 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-07-12 5 'Structure model' 1 4 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' Other 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_conn_angle 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_site 4 4 'Structure model' struct_site_gen 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_database_status 9 5 'Structure model' pdbx_initial_refinement_model 10 5 'Structure model' pdbx_struct_conn_angle 11 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 2 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.value' 15 4 'Structure model' '_struct_conn.conn_type_id' 16 4 'Structure model' '_struct_conn.id' 17 4 'Structure model' '_struct_conn.pdbx_dist_value' 18 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 33 4 'Structure model' '_struct_conn.ptnr2_symmetry' 34 5 'Structure model' '_database_2.pdbx_DOI' 35 5 'Structure model' '_database_2.pdbx_database_accession' 36 5 'Structure model' '_pdbx_database_status.status_code_sf' 37 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 38 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 39 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 40 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 41 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 42 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 43 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 44 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 45 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 46 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 47 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 48 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 49 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 50 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 51 5 'Structure model' '_pdbx_struct_conn_angle.value' 52 5 'Structure model' '_struct_conn.conn_type_id' 53 5 'Structure model' '_struct_conn.id' 54 5 'Structure model' '_struct_conn.pdbx_dist_value' 55 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 56 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 57 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 58 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 59 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 60 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 61 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 62 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 63 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 64 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 65 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 66 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 67 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 68 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 69 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 70 5 'Structure model' '_struct_conn.ptnr2_symmetry' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0102 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N2 D LCG 1 ? ? O D HOH 201 ? ? 1.86 2 1 O2 C LCC 72 ? ? O D HOH 201 ? ? 1.98 3 1 O D HOH 211 ? ? O D HOH 227 ? ? 2.05 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A TLN 68 ? ? "O3'" A TLN 68 ? ? P A LCC 69 ? ? 127.30 119.70 7.60 1.20 Y 2 1 "C3'" B LCG 2 ? ? "O3'" B LCG 2 ? ? P B TLN 3 ? ? 127.02 119.70 7.32 1.20 Y 3 1 "C3'" D LCG 1 ? ? "O3'" D LCG 1 ? ? P D LCG 2 ? ? 129.07 119.70 9.37 1.20 Y 4 1 "C3'" D TLN 3 ? ? "O3'" D TLN 3 ? ? P D LCG 4 ? ? 128.12 119.70 8.42 1.20 Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CAC AS AS N N 1 CAC O1 O N N 2 CAC O2 O N N 3 CAC C1 C N N 4 CAC C2 C N N 5 CAC H11 H N N 6 CAC H12 H N N 7 CAC H13 H N N 8 CAC H21 H N N 9 CAC H22 H N N 10 CAC H23 H N N 11 HOH O O N N 12 HOH H1 H N N 13 HOH H2 H N N 14 LCA P P N N 15 LCA O1P O N N 16 LCA "O5'" O N N 17 LCA "C5'" C N N 18 LCA "C3'" C N S 19 LCA "C6'" C N N 20 LCA N9 N Y N 21 LCA C8 C Y N 22 LCA C4 C Y N 23 LCA N7 N Y N 24 LCA C5 C Y N 25 LCA C6 C Y N 26 LCA "C2'" C N R 27 LCA N6 N N N 28 LCA "C4'" C N R 29 LCA "C1'" C N R 30 LCA C2 C Y N 31 LCA N1 N Y N 32 LCA "O4'" O N N 33 LCA O2P O N N 34 LCA N3 N Y N 35 LCA "O3'" O N N 36 LCA OXT O N N 37 LCA "O2'" O N N 38 LCA H1P H N N 39 LCA "H5'1" H N N 40 LCA "H5'2" H N N 41 LCA "H3'" H N N 42 LCA "H6'1" H N N 43 LCA "H6'2" H N N 44 LCA H8 H N N 45 LCA "H2'1" H N N 46 LCA H61 H N N 47 LCA H62 H N N 48 LCA "H1'" H N N 49 LCA H2 H N N 50 LCA HB H N N 51 LCA HA H N N 52 LCC "O5'" O N N 53 LCC "C5'" C N N 54 LCC "C4'" C N R 55 LCC "O4'" O N N 56 LCC "C1'" C N R 57 LCC N1 N N N 58 LCC C6 C N N 59 LCC C5 C N N 60 LCC C5M C N N 61 LCC C4 C N N 62 LCC N4 N N N 63 LCC N3 N N N 64 LCC C2 C N N 65 LCC O2 O N N 66 LCC "C3'" C N S 67 LCC "C2'" C N R 68 LCC "O2'" O N N 69 LCC "O3'" O N N 70 LCC "C6'" C N N 71 LCC P P N N 72 LCC O1P O N N 73 LCC O2P O N N 74 LCC OXT O N N 75 LCC "H5'1" H N N 76 LCC "H5'2" H N N 77 LCC "H1'" H N N 78 LCC H6 H N N 79 LCC H5M1 H N N 80 LCC H5M2 H N N 81 LCC H5M3 H N N 82 LCC H41 H N N 83 LCC H42 H N N 84 LCC "H3'" H N N 85 LCC "H2'1" H N N 86 LCC H3T H N N 87 LCC "H6'1" H N N 88 LCC "H6'2" H N N 89 LCC H1P H N N 90 LCC HXT H N N 91 LCG P P N N 92 LCG OP1 O N N 93 LCG "O5'" O N N 94 LCG "C5'" C N N 95 LCG "C3'" C N S 96 LCG "C6'" C N N 97 LCG N9 N Y N 98 LCG C8 C Y N 99 LCG C4 C Y N 100 LCG N7 N Y N 101 LCG C5 C Y N 102 LCG C6 C N N 103 LCG "C2'" C N R 104 LCG O6 O N N 105 LCG "C4'" C N R 106 LCG "C1'" C N R 107 LCG C2 C N N 108 LCG N1 N N N 109 LCG "O4'" O N N 110 LCG OP2 O N N 111 LCG N2 N N N 112 LCG N3 N N N 113 LCG "O2'" O N N 114 LCG "O3'" O N N 115 LCG OP3 O N N 116 LCG "H5'" H N N 117 LCG "H5''" H N N 118 LCG "H3'" H N N 119 LCG "H6'1" H N N 120 LCG "H6'2" H N N 121 LCG H8 H N N 122 LCG "H2'" H N N 123 LCG "H1'" H N N 124 LCG H1 H N N 125 LCG HOP2 H N N 126 LCG H21 H N N 127 LCG H22 H N N 128 LCG "HO3'" H N N 129 LCG HOP3 H N N 130 MG MG MG N N 131 NCO CO CO N N 132 NCO N1 N N N 133 NCO N2 N N N 134 NCO N3 N N N 135 NCO N4 N N N 136 NCO N5 N N N 137 NCO N6 N N N 138 NCO HN11 H N N 139 NCO HN12 H N N 140 NCO HN13 H N N 141 NCO HN21 H N N 142 NCO HN22 H N N 143 NCO HN23 H N N 144 NCO HN31 H N N 145 NCO HN32 H N N 146 NCO HN33 H N N 147 NCO HN41 H N N 148 NCO HN42 H N N 149 NCO HN43 H N N 150 NCO HN51 H N N 151 NCO HN52 H N N 152 NCO HN53 H N N 153 NCO HN61 H N N 154 NCO HN62 H N N 155 NCO HN63 H N N 156 TLN P P N N 157 TLN OP1 O N N 158 TLN OP2 O N N 159 TLN OP3 O N N 160 TLN "O5'" O N N 161 TLN "C5'" C N N 162 TLN "C4'" C N R 163 TLN "O4'" O N N 164 TLN "C1'" C N R 165 TLN N1 N N N 166 TLN C6 C N N 167 TLN C5 C N N 168 TLN C5M C N N 169 TLN C4 C N N 170 TLN O4 O N N 171 TLN N3 N N N 172 TLN C2 C N N 173 TLN O2 O N N 174 TLN "C3'" C N S 175 TLN "C2'" C N R 176 TLN "O2'" O N N 177 TLN "O3'" O N N 178 TLN "C6'" C N N 179 TLN HOP2 H N N 180 TLN HOP3 H N N 181 TLN "H5'" H N N 182 TLN "H5''" H N N 183 TLN "H1'" H N N 184 TLN H6 H N N 185 TLN H71 H N N 186 TLN H72 H N N 187 TLN H73 H N N 188 TLN H3 H N N 189 TLN "H3'" H N N 190 TLN "H2'" H N N 191 TLN "HO3'" H N N 192 TLN "H6'1" H N N 193 TLN "H6'2" H N N 194 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CAC AS O1 doub N N 1 CAC AS O2 sing N N 2 CAC AS C1 sing N N 3 CAC AS C2 sing N N 4 CAC C1 H11 sing N N 5 CAC C1 H12 sing N N 6 CAC C1 H13 sing N N 7 CAC C2 H21 sing N N 8 CAC C2 H22 sing N N 9 CAC C2 H23 sing N N 10 HOH O H1 sing N N 11 HOH O H2 sing N N 12 LCA P O1P sing N N 13 LCA P "O5'" sing N N 14 LCA P O2P doub N N 15 LCA P OXT sing N N 16 LCA O1P H1P sing N N 17 LCA "O5'" "C5'" sing N N 18 LCA "C5'" "C4'" sing N N 19 LCA "C5'" "H5'1" sing N N 20 LCA "C5'" "H5'2" sing N N 21 LCA "C3'" "C2'" sing N N 22 LCA "C3'" "C4'" sing N N 23 LCA "C3'" "O3'" sing N N 24 LCA "C3'" "H3'" sing N N 25 LCA "C6'" "C4'" sing N N 26 LCA "C6'" "O2'" sing N N 27 LCA "C6'" "H6'1" sing N N 28 LCA "C6'" "H6'2" sing N N 29 LCA N9 C8 sing Y N 30 LCA N9 C4 sing Y N 31 LCA N9 "C1'" sing N N 32 LCA C8 N7 doub Y N 33 LCA C8 H8 sing N N 34 LCA C4 C5 doub Y N 35 LCA C4 N3 sing Y N 36 LCA N7 C5 sing Y N 37 LCA C5 C6 sing Y N 38 LCA C6 N6 sing N N 39 LCA C6 N1 doub Y N 40 LCA "C2'" "C1'" sing N N 41 LCA "C2'" "O2'" sing N N 42 LCA "C2'" "H2'1" sing N N 43 LCA N6 H61 sing N N 44 LCA N6 H62 sing N N 45 LCA "C4'" "O4'" sing N N 46 LCA "C1'" "O4'" sing N N 47 LCA "C1'" "H1'" sing N N 48 LCA C2 N1 sing Y N 49 LCA C2 N3 doub Y N 50 LCA C2 H2 sing N N 51 LCA "O3'" HB sing N N 52 LCA OXT HA sing N N 53 LCC "O5'" "C5'" sing N N 54 LCC "O5'" P sing N N 55 LCC "C5'" "C4'" sing N N 56 LCC "C5'" "H5'1" sing N N 57 LCC "C5'" "H5'2" sing N N 58 LCC "C4'" "O4'" sing N N 59 LCC "C4'" "C3'" sing N N 60 LCC "C4'" "C6'" sing N N 61 LCC "O4'" "C1'" sing N N 62 LCC "C1'" N1 sing N N 63 LCC "C1'" "C2'" sing N N 64 LCC "C1'" "H1'" sing N N 65 LCC N1 C6 sing N N 66 LCC N1 C2 sing N N 67 LCC C6 C5 doub N N 68 LCC C6 H6 sing N N 69 LCC C5 C5M sing N N 70 LCC C5 C4 sing N N 71 LCC C5M H5M1 sing N N 72 LCC C5M H5M2 sing N N 73 LCC C5M H5M3 sing N N 74 LCC C4 N4 sing N N 75 LCC C4 N3 doub N N 76 LCC N4 H41 sing N N 77 LCC N4 H42 sing N N 78 LCC N3 C2 sing N N 79 LCC C2 O2 doub N N 80 LCC "C3'" "C2'" sing N N 81 LCC "C3'" "O3'" sing N N 82 LCC "C3'" "H3'" sing N N 83 LCC "C2'" "O2'" sing N N 84 LCC "C2'" "H2'1" sing N N 85 LCC "O2'" "C6'" sing N N 86 LCC "O3'" H3T sing N N 87 LCC "C6'" "H6'1" sing N N 88 LCC "C6'" "H6'2" sing N N 89 LCC P O1P sing N N 90 LCC P O2P doub N N 91 LCC P OXT sing N N 92 LCC O1P H1P sing N N 93 LCC OXT HXT sing N N 94 LCG P OP1 doub N N 95 LCG P "O5'" sing N N 96 LCG P OP2 sing N N 97 LCG P OP3 sing N N 98 LCG "O5'" "C5'" sing N N 99 LCG "C5'" "C4'" sing N N 100 LCG "C5'" "H5'" sing N N 101 LCG "C5'" "H5''" sing N N 102 LCG "C3'" "C2'" sing N N 103 LCG "C3'" "C4'" sing N N 104 LCG "C3'" "O3'" sing N N 105 LCG "C3'" "H3'" sing N N 106 LCG "C6'" "C4'" sing N N 107 LCG "C6'" "O2'" sing N N 108 LCG "C6'" "H6'1" sing N N 109 LCG "C6'" "H6'2" sing N N 110 LCG N9 C8 sing Y N 111 LCG N9 C4 sing Y N 112 LCG N9 "C1'" sing N N 113 LCG C8 N7 doub Y N 114 LCG C8 H8 sing N N 115 LCG C4 C5 doub Y N 116 LCG C4 N3 sing N N 117 LCG N7 C5 sing Y N 118 LCG C5 C6 sing N N 119 LCG C6 O6 doub N N 120 LCG C6 N1 sing N N 121 LCG "C2'" "C1'" sing N N 122 LCG "C2'" "O2'" sing N N 123 LCG "C2'" "H2'" sing N N 124 LCG "C4'" "O4'" sing N N 125 LCG "C1'" "O4'" sing N N 126 LCG "C1'" "H1'" sing N N 127 LCG C2 N1 sing N N 128 LCG C2 N2 sing N N 129 LCG C2 N3 doub N N 130 LCG N1 H1 sing N N 131 LCG OP2 HOP2 sing N N 132 LCG N2 H21 sing N N 133 LCG N2 H22 sing N N 134 LCG "O3'" "HO3'" sing N N 135 LCG OP3 HOP3 sing N N 136 NCO CO N1 sing N N 137 NCO CO N2 sing N N 138 NCO CO N3 sing N N 139 NCO CO N4 sing N N 140 NCO CO N5 sing N N 141 NCO CO N6 sing N N 142 NCO N1 HN11 sing N N 143 NCO N1 HN12 sing N N 144 NCO N1 HN13 sing N N 145 NCO N2 HN21 sing N N 146 NCO N2 HN22 sing N N 147 NCO N2 HN23 sing N N 148 NCO N3 HN31 sing N N 149 NCO N3 HN32 sing N N 150 NCO N3 HN33 sing N N 151 NCO N4 HN41 sing N N 152 NCO N4 HN42 sing N N 153 NCO N4 HN43 sing N N 154 NCO N5 HN51 sing N N 155 NCO N5 HN52 sing N N 156 NCO N5 HN53 sing N N 157 NCO N6 HN61 sing N N 158 NCO N6 HN62 sing N N 159 NCO N6 HN63 sing N N 160 TLN P OP1 doub N N 161 TLN P OP2 sing N N 162 TLN P OP3 sing N N 163 TLN P "O5'" sing N N 164 TLN OP2 HOP2 sing N N 165 TLN OP3 HOP3 sing N N 166 TLN "O5'" "C5'" sing N N 167 TLN "C5'" "C4'" sing N N 168 TLN "C5'" "H5'" sing N N 169 TLN "C5'" "H5''" sing N N 170 TLN "C4'" "O4'" sing N N 171 TLN "C4'" "C3'" sing N N 172 TLN "C4'" "C6'" sing N N 173 TLN "O4'" "C1'" sing N N 174 TLN "C1'" N1 sing N N 175 TLN "C1'" "C2'" sing N N 176 TLN "C1'" "H1'" sing N N 177 TLN N1 C6 sing N N 178 TLN N1 C2 sing N N 179 TLN C6 C5 doub N N 180 TLN C6 H6 sing N N 181 TLN C5 C5M sing N N 182 TLN C5 C4 sing N N 183 TLN C5M H71 sing N N 184 TLN C5M H72 sing N N 185 TLN C5M H73 sing N N 186 TLN C4 O4 doub N N 187 TLN C4 N3 sing N N 188 TLN N3 C2 sing N N 189 TLN N3 H3 sing N N 190 TLN C2 O2 doub N N 191 TLN "C3'" "C2'" sing N N 192 TLN "C3'" "O3'" sing N N 193 TLN "C3'" "H3'" sing N N 194 TLN "C2'" "O2'" sing N N 195 TLN "C2'" "H2'" sing N N 196 TLN "O2'" "C6'" sing N N 197 TLN "O3'" "HO3'" sing N N 198 TLN "C6'" "H6'1" sing N N 199 TLN "C6'" "H6'2" sing N N 200 # _ndb_struct_conf_na.entry_id 2X2Q _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A TLN 3 1_555 B LCA 5 1_555 0.362 -0.044 0.037 -1.961 -11.189 2.801 1 A_TLN68:LCA5_B A 68 ? B 5 ? 20 1 1 A LCA 5 1_555 B TLN 3 1_555 0.189 -0.113 0.026 -2.807 -8.618 5.070 2 A_LCA70:TLN3_B A 70 ? B 3 ? 20 1 1 C TLN 3 1_555 D LCA 5 1_555 0.356 0.144 0.021 1.601 -11.199 2.181 3 C_TLN68:LCA5_D C 68 ? D 5 ? 20 1 1 C LCA 5 1_555 D TLN 3 1_555 0.144 -0.111 0.137 -1.677 -7.807 3.432 4 C_LCA70:TLN3_D C 70 ? D 3 ? 20 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'COBALT HEXAMMINE(III)' NCO 4 'MAGNESIUM ION' MG 5 'CACODYLATE ION' CAC 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3GVN _pdbx_initial_refinement_model.details 'PDB ENTRY 3GVN' #