HEADER LYASE 25-JAN-10 2X3L TITLE CRYSTAL STRUCTURE OF THE ORN_LYS_ARG DECARBOXYLASE FAMILY TITLE 2 PROTEIN SAR0482 FROM METHICILLIN-RESISTANT STAPHYLOCOCCUS TITLE 3 AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORN/LYS/ARG DECARBOXYLASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 STRAIN: 252; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.OKE,L.G.CARTER,K.A.JOHNSON,H.LIU,S.A.MCMAHON,M.F.WHITE, AUTHOR 2 J.H.NAISMITH REVDAT 2 11-NOV-15 2X3L 1 REMARK VERSN SEQRES HET REVDAT 2 2 MODRES HETNAM HETSYN FORMUL REVDAT 2 3 LINK SITE ATOM ANISOU REVDAT 2 4 TER HETATM CONECT MASTER REVDAT 1 21-JUL-10 2X3L 0 JRNL AUTH M.OKE,L.G.CARTER,K.A.JOHNSON,H.LIU,S.A.MCMAHON,X.YAN, JRNL AUTH 2 M.KEROU,N.D.WEIKART,N.KADI,M.A.SHEIKH,S.SCHMELZ,M.DORWARD, JRNL AUTH 3 M.ZAWADZKI,C.COZENS,H.FALCONER,H.POWERS,I.M.OVERTON, JRNL AUTH 4 C.A.J.VAN NIEKERK,X.PENG,P.PATEL,R.A.GARRETT,D.PRANGISHVILI, JRNL AUTH 5 C.H.BOTTING,P.J.COOTE,D.T.F.DRYDEN,G.J.BARTON, JRNL AUTH 6 U.SCHWARZ-LINEK,G.L.CHALLIS,G.L.TAYLOR,M.F.WHITE, JRNL AUTH 7 J.H.NAISMITH JRNL TITL THE SCOTTISH STRUCTURAL PROTEOMICS FACILITY: TARGETS, JRNL TITL 2 METHODS AND OUTPUTS. JRNL REF J.STRUCT.FUNCT.GENOMICS V. 11 167 2010 JRNL REFN ISSN 1345-711X JRNL PMID 20419351 JRNL DOI 10.1007/S10969-010-9090-Y REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0090 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 99.16 REMARK 3 NUMBER OF REFLECTIONS : 50798 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.23132 REMARK 3 R VALUE (WORKING SET) : 0.22886 REMARK 3 FREE R VALUE : 0.27684 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 2713 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.000 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.052 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3740 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.314 REMARK 3 BIN FREE R VALUE SET COUNT : 185 REMARK 3 BIN FREE R VALUE : 0.359 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6802 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 127 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.754 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02 REMARK 3 B22 (A**2) : 0.11 REMARK 3 B33 (A**2) : -0.15 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : -0.09 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.258 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.176 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.906 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.868 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7023 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4635 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9509 ; 1.125 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11430 ; 0.820 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 839 ; 5.650 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 319 ;41.348 ;25.392 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1248 ;13.938 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ; 7.475 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1065 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7608 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1300 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4211 ; 0.349 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1699 ; 0.089 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6841 ; 0.626 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2812 ; 1.164 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2667 ; 1.609 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 4 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 5 A 139 4 REMARK 3 1 B 5 B 139 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1758 ; 0.34 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1758 ; 0.34 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1758 ; 0.40 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1758 ; 0.40 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 147 A 358 4 REMARK 3 1 B 147 B 358 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 A (A): 2923 ; 0.39 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 B (A): 2923 ; 0.39 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 2923 ; 0.35 ; 2.00 REMARK 3 MEDIUM THERMAL 2 B (A**2): 2923 ; 0.35 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 384 A 443 4 REMARK 3 1 B 384 B 443 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 3 A (A): 812 ; 0.45 ; 0.50 REMARK 3 MEDIUM POSITIONAL 3 B (A): 812 ; 0.45 ; 0.50 REMARK 3 MEDIUM THERMAL 3 A (A**2): 812 ; 0.32 ; 2.00 REMARK 3 MEDIUM THERMAL 3 B (A**2): 812 ; 0.32 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 366 A 377 4 REMARK 3 1 B 366 B 377 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 4 A (A): 167 ; 0.44 ; 0.50 REMARK 3 MEDIUM POSITIONAL 4 B (A): 167 ; 0.44 ; 0.50 REMARK 3 MEDIUM THERMAL 4 A (A**2): 167 ; 0.27 ; 2.00 REMARK 3 MEDIUM THERMAL 4 B (A**2): 167 ; 0.27 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 95 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1770 -4.3980 12.9470 REMARK 3 T TENSOR REMARK 3 T11: 0.1407 T22: 0.1896 REMARK 3 T33: 0.0852 T12: -0.0338 REMARK 3 T13: 0.0138 T23: -0.0469 REMARK 3 L TENSOR REMARK 3 L11: 0.9701 L22: 1.6199 REMARK 3 L33: 1.2452 L12: 0.8439 REMARK 3 L13: 0.5519 L23: 0.1839 REMARK 3 S TENSOR REMARK 3 S11: 0.1171 S12: -0.1647 S13: 0.0882 REMARK 3 S21: 0.2756 S22: -0.0805 S23: -0.0271 REMARK 3 S31: -0.1514 S32: 0.2085 S33: -0.0366 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 96 A 156 REMARK 3 ORIGIN FOR THE GROUP (A): 0.5800 -18.4690 -6.5750 REMARK 3 T TENSOR REMARK 3 T11: 0.0557 T22: 0.0560 REMARK 3 T33: 0.0544 T12: 0.0138 REMARK 3 T13: -0.0175 T23: -0.0274 REMARK 3 L TENSOR REMARK 3 L11: 2.0258 L22: 2.3312 REMARK 3 L33: 2.7600 L12: 1.5376 REMARK 3 L13: -0.5357 L23: -1.3610 REMARK 3 S TENSOR REMARK 3 S11: -0.0501 S12: 0.0879 S13: -0.0341 REMARK 3 S21: -0.2755 S22: 0.0511 S23: 0.0808 REMARK 3 S31: 0.2586 S32: 0.0988 S33: -0.0009 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 157 A 230 REMARK 3 ORIGIN FOR THE GROUP (A): 10.3030 -18.8040 3.4980 REMARK 3 T TENSOR REMARK 3 T11: 0.0425 T22: 0.0614 REMARK 3 T33: 0.0773 T12: 0.0036 REMARK 3 T13: -0.0165 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 0.8779 L22: 1.2565 REMARK 3 L33: 1.7831 L12: 0.2640 REMARK 3 L13: -0.2251 L23: -0.3442 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: 0.0651 S13: -0.2292 REMARK 3 S21: -0.0421 S22: -0.0621 S23: -0.0018 REMARK 3 S31: 0.1798 S32: -0.0476 S33: 0.0609 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 231 A 290 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3280 -14.9270 14.8960 REMARK 3 T TENSOR REMARK 3 T11: 0.0933 T22: 0.0958 REMARK 3 T33: 0.0952 T12: 0.0171 REMARK 3 T13: -0.0122 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.1803 L22: 0.9259 REMARK 3 L33: 1.3983 L12: 0.0078 REMARK 3 L13: 0.2198 L23: -0.2689 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: -0.0647 S13: -0.0860 REMARK 3 S21: 0.1168 S22: -0.0489 S23: -0.0329 REMARK 3 S31: 0.1542 S32: 0.0702 S33: 0.0112 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 291 A 443 REMARK 3 ORIGIN FOR THE GROUP (A): -12.9600 -19.1860 4.5790 REMARK 3 T TENSOR REMARK 3 T11: 0.0824 T22: 0.0841 REMARK 3 T33: 0.1018 T12: -0.0065 REMARK 3 T13: 0.0144 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.8464 L22: 0.5525 REMARK 3 L33: 2.6369 L12: 0.0281 REMARK 3 L13: 0.7796 L23: -0.0768 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: -0.0689 S13: -0.0328 REMARK 3 S21: 0.0967 S22: 0.0005 S23: 0.1015 REMARK 3 S31: 0.0314 S32: -0.2925 S33: -0.0359 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 69 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8430 6.0180 18.0400 REMARK 3 T TENSOR REMARK 3 T11: 0.1879 T22: 0.2091 REMARK 3 T33: 0.1514 T12: -0.0393 REMARK 3 T13: 0.0503 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 0.1320 L22: 2.4145 REMARK 3 L33: 0.7753 L12: -0.0869 REMARK 3 L13: -0.3029 L23: -0.1910 REMARK 3 S TENSOR REMARK 3 S11: 0.0084 S12: 0.0479 S13: -0.0137 REMARK 3 S21: 0.2494 S22: -0.0067 S23: 0.2731 REMARK 3 S31: -0.0187 S32: -0.1531 S33: -0.0017 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 70 B 153 REMARK 3 ORIGIN FOR THE GROUP (A): 4.6580 15.4890 -6.7510 REMARK 3 T TENSOR REMARK 3 T11: 0.0371 T22: 0.0669 REMARK 3 T33: 0.0910 T12: 0.0054 REMARK 3 T13: -0.0075 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.4482 L22: 2.0587 REMARK 3 L33: 1.0614 L12: 0.3978 REMARK 3 L13: -0.0403 L23: 0.4899 REMARK 3 S TENSOR REMARK 3 S11: -0.0510 S12: 0.2385 S13: 0.1044 REMARK 3 S21: -0.2482 S22: 0.0612 S23: -0.0027 REMARK 3 S31: -0.0886 S32: -0.0420 S33: -0.0101 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 154 B 226 REMARK 3 ORIGIN FOR THE GROUP (A): -0.5940 20.8980 2.2050 REMARK 3 T TENSOR REMARK 3 T11: 0.0781 T22: 0.0542 REMARK 3 T33: 0.1483 T12: 0.0160 REMARK 3 T13: 0.0262 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 0.8769 L22: 1.2445 REMARK 3 L33: 1.2398 L12: 0.4956 REMARK 3 L13: 0.3841 L23: 0.0943 REMARK 3 S TENSOR REMARK 3 S11: -0.0555 S12: -0.0001 S13: 0.2859 REMARK 3 S21: -0.0603 S22: -0.0246 S23: 0.0413 REMARK 3 S31: -0.1523 S32: -0.0709 S33: 0.0801 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 227 B 303 REMARK 3 ORIGIN FOR THE GROUP (A): 4.6280 19.2740 12.1790 REMARK 3 T TENSOR REMARK 3 T11: 0.1270 T22: 0.0930 REMARK 3 T33: 0.1647 T12: 0.0159 REMARK 3 T13: -0.0048 T23: -0.0280 REMARK 3 L TENSOR REMARK 3 L11: 0.5598 L22: 0.8369 REMARK 3 L33: 0.1689 L12: 0.3475 REMARK 3 L13: -0.1459 L23: 0.0054 REMARK 3 S TENSOR REMARK 3 S11: 0.0688 S12: -0.0893 S13: 0.2359 REMARK 3 S21: 0.1049 S22: -0.0795 S23: 0.2077 REMARK 3 S31: -0.0984 S32: -0.0257 S33: 0.0106 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 304 B 443 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3030 19.5930 1.4070 REMARK 3 T TENSOR REMARK 3 T11: 0.0939 T22: 0.0997 REMARK 3 T33: 0.1620 T12: -0.0034 REMARK 3 T13: -0.0041 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.8822 L22: 0.9318 REMARK 3 L33: 2.5481 L12: 0.0981 REMARK 3 L13: -0.3559 L23: 0.4255 REMARK 3 S TENSOR REMARK 3 S11: 0.0537 S12: 0.1015 S13: 0.0450 REMARK 3 S21: 0.0112 S22: 0.0258 S23: -0.1099 REMARK 3 S31: -0.0965 S32: 0.2782 S33: -0.0796 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1445 A 1445 REMARK 3 ORIGIN FOR THE GROUP (A): -16.8200 -27.8820 -24.3710 REMARK 3 T TENSOR REMARK 3 T11: 0.6334 T22: 0.4925 REMARK 3 T33: 0.4818 T12: 0.0858 REMARK 3 T13: -0.1576 T23: -0.1953 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1446 A 1446 REMARK 3 ORIGIN FOR THE GROUP (A): -15.4930 -29.1030 -19.8900 REMARK 3 T TENSOR REMARK 3 T11: 0.5234 T22: 0.3074 REMARK 3 T33: 0.7369 T12: -0.0062 REMARK 3 T13: 0.0076 T23: -0.1876 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1447 A 1447 REMARK 3 ORIGIN FOR THE GROUP (A): -25.0890 -30.0580 -11.6980 REMARK 3 T TENSOR REMARK 3 T11: 0.2184 T22: 0.1708 REMARK 3 T33: 0.3693 T12: -0.0120 REMARK 3 T13: -0.0251 T23: -0.0494 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1445 B 1445 REMARK 3 ORIGIN FOR THE GROUP (A): 6.5760 15.4390 -22.5630 REMARK 3 T TENSOR REMARK 3 T11: 1.3275 T22: 0.5842 REMARK 3 T33: 0.7452 T12: -0.0710 REMARK 3 T13: 0.1423 T23: 0.0762 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1446 B 1446 REMARK 3 ORIGIN FOR THE GROUP (A): 11.1020 31.6980 -16.7160 REMARK 3 T TENSOR REMARK 3 T11: 1.1317 T22: 0.5518 REMARK 3 T33: 1.0867 T12: -0.0677 REMARK 3 T13: -0.2095 T23: 0.1925 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1447 B 1447 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3060 40.1160 13.5950 REMARK 3 T TENSOR REMARK 3 T11: 0.5946 T22: 0.5228 REMARK 3 T33: 0.8485 T12: -0.0656 REMARK 3 T13: 0.0207 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. THE STRUCTURE IS ONLY ORDERED FROM RESIDUE REMARK 3 5 TO 443. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. REMARK 3 ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS REMARK 4 REMARK 4 2X3L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JAN-10. REMARK 100 THE PDBE ID CODE IS EBI-42625. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50798 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.00 REMARK 200 RESOLUTION RANGE LOW (A) : 29.17 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.1 REMARK 200 R MERGE (I) : 0.10 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.60 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.9 REMARK 200 R MERGE FOR SHELL (I) : 0.46 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.1 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG4000, 0.1 M TRIS-CL, PH8.0, REMARK 280 0.32 M MGCL2, 0.8% ETHYLENE GLYCOL. THE CRYSTAL WAS SOAKED REMARK 280 WITH 20 MM SAMARIUM ACETATE AND 5MM PLP. THE CRYSTALS WERE REMARK 280 CRYOPROTECTED WITH 22% PEG4000, 0.1M TRIS-CL, PH8.0, 0.3 M REMARK 280 MGCL2, 2.0% ETHYLENE GLYCOL, 19% PEG400 DILUTED WITH A 50MM REMARK 280 PLP SOLUTION 1:10 (FINAL CONCENTRATIONS ABOUT 17% PEG400 AND REMARK 280 5MM PLP) REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 68.64150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 MET A 2 REMARK 465 LYS A 3 REMARK 465 GLN A 4 REMARK 465 SER A 140 REMARK 465 ARG A 141 REMARK 465 LEU A 142 REMARK 465 ASN A 143 REMARK 465 ASN A 144 REMARK 465 ASP A 145 REMARK 465 GLY A 146 REMARK 465 VAL A 359 REMARK 465 SER A 360 REMARK 465 LYS A 361 REMARK 465 VAL A 362 REMARK 465 LYS A 363 REMARK 465 GLN A 364 REMARK 465 ARG A 378 REMARK 465 PHE A 379 REMARK 465 GLU A 380 REMARK 465 TYR A 381 REMARK 465 VAL A 382 REMARK 465 THR A 383 REMARK 465 GLU A 444 REMARK 465 ASP A 445 REMARK 465 GLU A 446 REMARK 465 GLY B 1 REMARK 465 MET B 2 REMARK 465 LYS B 3 REMARK 465 GLN B 4 REMARK 465 SER B 140 REMARK 465 ARG B 141 REMARK 465 LEU B 142 REMARK 465 ASN B 143 REMARK 465 ASN B 144 REMARK 465 ASP B 145 REMARK 465 GLY B 146 REMARK 465 SER B 360 REMARK 465 LYS B 361 REMARK 465 VAL B 362 REMARK 465 LYS B 363 REMARK 465 GLN B 364 REMARK 465 THR B 365 REMARK 465 ARG B 378 REMARK 465 PHE B 379 REMARK 465 GLU B 380 REMARK 465 GLU B 444 REMARK 465 ASP B 445 REMARK 465 GLU B 446 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG ASP A 351 SM SM A 1448 1.94 REMARK 500 OE1 GLU B 286 O HOH B 2040 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 286 SM SM B 1446 2545 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 17 55.90 32.43 REMARK 500 LYS A 43 -146.85 -118.51 REMARK 500 ASP A 50 -127.22 -90.20 REMARK 500 ASP A 51 110.47 -165.26 REMARK 500 GLU A 56 13.88 -141.97 REMARK 500 GLU A 57 -115.15 -138.35 REMARK 500 ASN A 79 42.34 -106.80 REMARK 500 LYS A 136 147.21 -170.70 REMARK 500 GLU A 182 36.15 -99.79 REMARK 500 MET A 218 -20.03 101.03 REMARK 500 SER A 245 68.28 -117.26 REMARK 500 ASN A 439 28.79 46.51 REMARK 500 LYS B 43 -140.75 -110.60 REMARK 500 ASP B 50 -137.44 -94.46 REMARK 500 HIS B 54 53.97 -160.39 REMARK 500 GLU B 56 21.07 -141.72 REMARK 500 GLU B 57 -125.63 -145.14 REMARK 500 GLN B 117 61.12 61.97 REMARK 500 MET B 218 -22.71 95.20 REMARK 500 THR B 243 150.16 -41.45 REMARK 500 SER B 245 67.66 -116.00 REMARK 500 LYS B 357 129.13 77.67 REMARK 500 PRO B 376 29.73 -77.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM B1445 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2013 O REMARK 620 2 HOH B2021 O 53.9 REMARK 620 3 HOH B2022 O 64.5 90.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM A1446 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2068 O REMARK 620 2 GLU A 421 OE2 43.4 REMARK 620 3 ASN A 418 OD1 70.7 76.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM A1447 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 428 OE1 REMARK 620 2 GLU A 425 OE1 54.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM B1447 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 301 OE2 REMARK 620 2 GLU B 301 OE1 49.6 REMARK 620 3 HOH B2040 O 68.3 107.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM A1448 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2056 O REMARK 620 2 HOH A2055 O 89.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A1211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A1445 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A1446 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A1447 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A1448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP B1211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM B1445 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM B1446 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM B1447 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X3F RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE METHICILLIN-RESISTANT REMARK 900 STAPHYLOCOCCUS AUREUS SAR2676, A PANTOTHENATE SYNTHETASE. REMARK 900 RELATED ID: 2X3G RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HYPOTHETICAL PROTEIN ORF119 REMARK 900 FROM SULFOLOBUS ISLANDICUS ROD-SHAPED VIRUS 1 REMARK 900 RELATED ID: 2X3M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN ORF239 FROM REMARK 900 PYROBACULUM SPHERICAL VIRUS REMARK 900 RELATED ID: 2X3N RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PQSL, A PROBABLE FAD-DEPENDENT REMARK 900 MONOOXYGENASE FROM PSEUDOMONAS AERUGINOSA REMARK 900 RELATED ID: 2X3O RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HYPOTHETICAL PROTEIN PA0856 REMARK 900 FROM PSEUDOMONAS AERUGINOSA REMARK 900 RELATED ID: 2X4G RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PA4631, A NUCLEOSIDE-DIPHOSPHATE- REMARK 900 SUGAR EPIMERASE FROM PSEUDOMONAS AERUGINOSA REMARK 900 RELATED ID: 2X4H RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HYPOTHETICAL PROTEIN SSO2273 REMARK 900 FROM SULFOLOBUS SOLFATARICUS REMARK 900 RELATED ID: 2X4J RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ORF137 FROM PYROBACULUM SPHERICAL REMARK 900 VIRUS REMARK 900 RELATED ID: 2X4K RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SAR1376, A PUTATIVE 4- REMARK 900 OXALOCROTONATE TAUTOMERASE FROM THE METHICILLIN-RESISTANT REMARK 900 STAPHYLOCOCCUS AUREUS (MRSA) REMARK 900 RELATED ID: 2X4L RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF DESE, A FERRIC-SIDEROPHORE RECEPTOR REMARK 900 PROTEIN FROM STREPTOMYCES COELICOLOR DBREF 2X3L A 2 446 UNP Q6GJJ0 Q6GJJ0_STAAR 1 445 DBREF 2X3L B 2 446 UNP Q6GJJ0 Q6GJJ0_STAAR 1 445 SEQADV 2X3L GLY A 1 UNP Q6GJJ0 EXPRESSION TAG SEQADV 2X3L GLY B 1 UNP Q6GJJ0 EXPRESSION TAG SEQRES 1 A 446 GLY MET LYS GLN PRO ILE LEU ASN LYS LEU GLU SER LEU SEQRES 2 A 446 ASN GLN GLU GLU ALA ILE SER LEU HIS VAL PRO GLY HIS SEQRES 3 A 446 LYS ASN MET THR ILE GLY HIS LEU SER GLN LEU SER MET SEQRES 4 A 446 THR MET ASP LYS THR GLU ILE PRO GLY LEU ASP ASP LEU SEQRES 5 A 446 HIS HIS PRO GLU GLU VAL ILE LEU LYS SER MET LYS GLN SEQRES 6 A 446 VAL GLU LYS HIS SER ASP TYR ASP GLY TYR PHE LEU VAL SEQRES 7 A 446 ASN GLY THR THR SER GLY ILE LEU SER VAL ILE GLN SER SEQRES 8 A 446 PHE SER GLN LYS LYS GLY ASP ILE LEU MET ALA ARG ASN SEQRES 9 A 446 VAL HIS LYS SER VAL LEU HIS ALA LEU ASP ILE SER GLN SEQRES 10 A 446 GLN GLU GLY HIS PHE ILE GLU THR HIS GLN SER PRO LEU SEQRES 11 A 446 THR ASN HIS TYR ASN LYS VAL ASN LEU SER ARG LEU ASN SEQRES 12 A 446 ASN ASP GLY HIS LYS LEU VAL VAL LEU THR TYR PRO ASN SEQRES 13 A 446 TYR TYR GLY GLU THR PHE ASN VAL GLU GLU VAL ILE LYS SEQRES 14 A 446 SER LEU HIS GLN LEU ASN ILE PRO VAL LEU ILE ASP GLU SEQRES 15 A 446 ALA HIS GLY ALA HIS PHE GLY LEU GLN GLY PHE PRO ASP SEQRES 16 A 446 SER THR LEU ASN TYR GLN ALA ASP TYR VAL VAL GLN SER SEQRES 17 A 446 PHE HIS LYS THR LEU PRO ALA LEU THR MET GLY SER VAL SEQRES 18 A 446 LEU TYR ILE HIS LYS ASN ALA PRO TYR ARG GLU ASN ILE SEQRES 19 A 446 ILE GLU TYR LEU SER TYR PHE GLN THR SER SER PRO SER SEQRES 20 A 446 TYR LEU ILE MET ALA SER LEU GLU SER ALA ALA GLN PHE SEQRES 21 A 446 TYR LYS THR TYR ASP SER THR LEU PHE PHE ALA LYS ARG SEQRES 22 A 446 ALA GLN LEU ILE GLU CYS LEU GLU ASN LYS GLY PHE GLU SEQRES 23 A 446 MET LEU GLN VAL ASP ASP PRO LEU LYS LEU LEU ILE LYS SEQRES 24 A 446 TYR GLU GLY PHE THR GLY HIS ASP ILE GLN ASN TRP PHE SEQRES 25 A 446 MET ASN ALA HIS ILE TYR LEU GLU LEU ALA ASP ASP TYR SEQRES 26 A 446 GLN ALA LEU ALA ILE LEU PRO LEU TRP HIS HIS ASP ASP SEQRES 27 A 446 THR TYR LEU PHE ASP SER LEU LEU ARG LYS ILE GLU ASP SEQRES 28 A 446 MET ILE LEU PRO LYS LYS SER VAL SER LYS VAL LYS GLN SEQRES 29 A 446 THR GLN LEU LEU THR THR GLU GLY ASN TYR LYS PRO LYS SEQRES 30 A 446 ARG PHE GLU TYR VAL THR TRP CYS ASP LEU LYS LYS ALA SEQRES 31 A 446 LYS GLY LYS VAL LEU ALA ARG HIS ILE VAL PRO TYR PRO SEQRES 32 A 446 PRO GLY ILE PRO ILE ILE PHE LYS GLY GLU THR ILE THR SEQRES 33 A 446 GLU ASN MET ILE GLU LEU VAL ASN GLU TYR LEU GLU THR SEQRES 34 A 446 GLY MET ILE VAL GLU GLY ILE LYS ASN ASN LYS ILE LEU SEQRES 35 A 446 VAL GLU ASP GLU SEQRES 1 B 446 GLY MET LYS GLN PRO ILE LEU ASN LYS LEU GLU SER LEU SEQRES 2 B 446 ASN GLN GLU GLU ALA ILE SER LEU HIS VAL PRO GLY HIS SEQRES 3 B 446 LYS ASN MET THR ILE GLY HIS LEU SER GLN LEU SER MET SEQRES 4 B 446 THR MET ASP LYS THR GLU ILE PRO GLY LEU ASP ASP LEU SEQRES 5 B 446 HIS HIS PRO GLU GLU VAL ILE LEU LYS SER MET LYS GLN SEQRES 6 B 446 VAL GLU LYS HIS SER ASP TYR ASP GLY TYR PHE LEU VAL SEQRES 7 B 446 ASN GLY THR THR SER GLY ILE LEU SER VAL ILE GLN SER SEQRES 8 B 446 PHE SER GLN LYS LYS GLY ASP ILE LEU MET ALA ARG ASN SEQRES 9 B 446 VAL HIS LYS SER VAL LEU HIS ALA LEU ASP ILE SER GLN SEQRES 10 B 446 GLN GLU GLY HIS PHE ILE GLU THR HIS GLN SER PRO LEU SEQRES 11 B 446 THR ASN HIS TYR ASN LYS VAL ASN LEU SER ARG LEU ASN SEQRES 12 B 446 ASN ASP GLY HIS LYS LEU VAL VAL LEU THR TYR PRO ASN SEQRES 13 B 446 TYR TYR GLY GLU THR PHE ASN VAL GLU GLU VAL ILE LYS SEQRES 14 B 446 SER LEU HIS GLN LEU ASN ILE PRO VAL LEU ILE ASP GLU SEQRES 15 B 446 ALA HIS GLY ALA HIS PHE GLY LEU GLN GLY PHE PRO ASP SEQRES 16 B 446 SER THR LEU ASN TYR GLN ALA ASP TYR VAL VAL GLN SER SEQRES 17 B 446 PHE HIS LYS THR LEU PRO ALA LEU THR MET GLY SER VAL SEQRES 18 B 446 LEU TYR ILE HIS LYS ASN ALA PRO TYR ARG GLU ASN ILE SEQRES 19 B 446 ILE GLU TYR LEU SER TYR PHE GLN THR SER SER PRO SER SEQRES 20 B 446 TYR LEU ILE MET ALA SER LEU GLU SER ALA ALA GLN PHE SEQRES 21 B 446 TYR LYS THR TYR ASP SER THR LEU PHE PHE ALA LYS ARG SEQRES 22 B 446 ALA GLN LEU ILE GLU CYS LEU GLU ASN LYS GLY PHE GLU SEQRES 23 B 446 MET LEU GLN VAL ASP ASP PRO LEU LYS LEU LEU ILE LYS SEQRES 24 B 446 TYR GLU GLY PHE THR GLY HIS ASP ILE GLN ASN TRP PHE SEQRES 25 B 446 MET ASN ALA HIS ILE TYR LEU GLU LEU ALA ASP ASP TYR SEQRES 26 B 446 GLN ALA LEU ALA ILE LEU PRO LEU TRP HIS HIS ASP ASP SEQRES 27 B 446 THR TYR LEU PHE ASP SER LEU LEU ARG LYS ILE GLU ASP SEQRES 28 B 446 MET ILE LEU PRO LYS LYS SER VAL SER LYS VAL LYS GLN SEQRES 29 B 446 THR GLN LEU LEU THR THR GLU GLY ASN TYR LYS PRO LYS SEQRES 30 B 446 ARG PHE GLU TYR VAL THR TRP CYS ASP LEU LYS LYS ALA SEQRES 31 B 446 LYS GLY LYS VAL LEU ALA ARG HIS ILE VAL PRO TYR PRO SEQRES 32 B 446 PRO GLY ILE PRO ILE ILE PHE LYS GLY GLU THR ILE THR SEQRES 33 B 446 GLU ASN MET ILE GLU LEU VAL ASN GLU TYR LEU GLU THR SEQRES 34 B 446 GLY MET ILE VAL GLU GLY ILE LYS ASN ASN LYS ILE LEU SEQRES 35 B 446 VAL GLU ASP GLU HET PLP A1211 15 HET SM A1445 1 HET SM A1446 1 HET SM A1447 1 HET SM A1448 1 HET EDO A1449 4 HET PLP B1211 15 HET SM B1445 1 HET SM B1446 1 HET SM B1447 1 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM SM SAMARIUM (III) ION HETNAM EDO 1,2-ETHANEDIOL HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 PLP 2(C8 H10 N O6 P) FORMUL 2 SM 7(SM 3+) FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *127(H2 O) HELIX 1 1 PRO A 5 GLU A 16 1 12 HELIX 2 2 HIS A 33 LEU A 37 5 5 HELIX 3 3 SER A 38 ASP A 42 5 5 HELIX 4 4 GLU A 57 GLU A 67 1 11 HELIX 5 5 ASN A 79 SER A 91 1 13 HELIX 6 6 HIS A 106 GLN A 117 1 12 HELIX 7 7 ASN A 163 LEU A 174 1 12 HELIX 8 8 SER A 196 GLN A 201 5 6 HELIX 9 9 SER A 208 LEU A 213 1 6 HELIX 10 10 TYR A 230 GLN A 242 1 13 HELIX 11 11 SER A 247 TYR A 264 1 18 HELIX 12 12 SER A 266 LYS A 283 1 18 HELIX 13 13 THR A 304 ALA A 315 1 12 HELIX 14 14 LEU A 341 ASP A 351 1 11 HELIX 15 15 LYS A 388 ALA A 390 5 3 HELIX 16 16 THR A 416 THR A 429 1 14 HELIX 17 17 PRO B 5 GLU B 16 1 12 HELIX 18 18 HIS B 33 LEU B 37 5 5 HELIX 19 19 SER B 38 ASP B 42 5 5 HELIX 20 20 GLU B 57 GLU B 67 1 11 HELIX 21 21 ASN B 79 SER B 91 1 13 HELIX 22 22 HIS B 106 GLN B 117 1 12 HELIX 23 23 ASN B 163 LEU B 174 1 12 HELIX 24 24 SER B 196 GLN B 201 5 6 HELIX 25 25 SER B 208 LEU B 213 1 6 HELIX 26 26 TYR B 230 GLN B 242 1 13 HELIX 27 27 SER B 247 TYR B 264 1 18 HELIX 28 28 SER B 266 LYS B 283 1 18 HELIX 29 29 THR B 304 ASN B 314 1 11 HELIX 30 30 LEU B 341 MET B 352 1 12 HELIX 31 31 LYS B 388 ALA B 390 5 3 HELIX 32 32 THR B 416 THR B 429 1 14 SHEET 1 AA 2 ILE A 19 LEU A 21 0 SHEET 2 AA 2 ILE A 317 LEU A 319 1 O TYR A 318 N LEU A 21 SHEET 1 AB 8 TYR A 72 LEU A 77 0 SHEET 2 AB 8 SER A 220 HIS A 225 -1 O SER A 220 N LEU A 77 SHEET 3 AB 8 TYR A 204 GLN A 207 -1 O VAL A 205 N TYR A 223 SHEET 4 AB 8 VAL A 178 ASP A 181 1 O VAL A 178 N TYR A 204 SHEET 5 AB 8 LEU A 149 THR A 153 1 O VAL A 150 N LEU A 179 SHEET 6 AB 8 ILE A 99 MET A 101 1 O LEU A 100 N VAL A 151 SHEET 7 AB 8 GLY A 120 PHE A 122 1 O HIS A 121 N MET A 101 SHEET 8 AB 8 GLY A 372 TYR A 374 -1 O GLY A 372 N PHE A 122 SHEET 1 AC 2 GLU A 124 GLN A 127 0 SHEET 2 AC 2 TYR A 134 ASN A 138 -1 N ASN A 135 O HIS A 126 SHEET 1 AD 4 GLU A 286 GLN A 289 0 SHEET 2 AD 4 LYS A 295 LYS A 299 -1 O LEU A 297 N LEU A 288 SHEET 3 AD 4 ALA A 327 ILE A 330 -1 O ALA A 327 N ILE A 298 SHEET 4 AD 4 LEU A 321 ALA A 322 -1 O LEU A 321 N LEU A 328 SHEET 1 AE 3 CYS A 385 ASP A 386 0 SHEET 2 AE 3 LYS A 440 ILE A 441 -1 O ILE A 441 N CYS A 385 SHEET 3 AE 3 ILE A 436 LYS A 437 -1 O LYS A 437 N LYS A 440 SHEET 1 AF 2 VAL A 400 TYR A 402 0 SHEET 2 AF 2 ILE A 432 GLU A 434 -1 O ILE A 432 N TYR A 402 SHEET 1 BA 2 ILE B 19 LEU B 21 0 SHEET 2 BA 2 ILE B 317 LEU B 319 1 O TYR B 318 N LEU B 21 SHEET 1 BB 8 TYR B 72 LEU B 77 0 SHEET 2 BB 8 SER B 220 HIS B 225 -1 O SER B 220 N LEU B 77 SHEET 3 BB 8 TYR B 204 GLN B 207 -1 O VAL B 205 N TYR B 223 SHEET 4 BB 8 VAL B 178 ASP B 181 1 O VAL B 178 N TYR B 204 SHEET 5 BB 8 LEU B 149 THR B 153 1 O VAL B 150 N LEU B 179 SHEET 6 BB 8 ILE B 99 MET B 101 1 O LEU B 100 N VAL B 151 SHEET 7 BB 8 GLY B 120 PHE B 122 1 O HIS B 121 N MET B 101 SHEET 8 BB 8 GLY B 372 TYR B 374 -1 O GLY B 372 N PHE B 122 SHEET 1 BC 2 GLU B 124 GLN B 127 0 SHEET 2 BC 2 TYR B 134 ASN B 138 -1 N ASN B 135 O HIS B 126 SHEET 1 BD 4 GLU B 286 GLN B 289 0 SHEET 2 BD 4 LYS B 295 LYS B 299 -1 O LEU B 297 N LEU B 288 SHEET 3 BD 4 ALA B 327 ILE B 330 -1 O ALA B 327 N ILE B 298 SHEET 4 BD 4 LEU B 321 ALA B 322 -1 O LEU B 321 N LEU B 328 SHEET 1 BE 3 THR B 383 ASP B 386 0 SHEET 2 BE 3 LYS B 440 VAL B 443 -1 O ILE B 441 N CYS B 385 SHEET 3 BE 3 ILE B 436 LYS B 437 -1 O LYS B 437 N LYS B 440 SHEET 1 BF 2 VAL B 400 TYR B 402 0 SHEET 2 BF 2 ILE B 432 GLU B 434 -1 O ILE B 432 N TYR B 402 LINK NZ LYS A 211 C4A PLP A1211 1555 1555 1.35 LINK OD1 ASP A 351 SM SM A1448 1555 1555 1.79 LINK OD2 ASP A 351 SM SM A1448 1555 1555 1.79 LINK OE2 GLU A 417 SM SM A1445 1555 1555 1.83 LINK OE1 GLU A 421 SM SM A1446 1555 1555 1.84 LINK OE2 GLU A 425 SM SM A1447 1555 1555 1.83 LINK OE2 GLU A 428 SM SM A1447 1555 1555 1.83 LINK SM SM A1446 OD1 ASN A 418 1555 1555 2.75 LINK SM SM A1446 O HOH A2068 1555 1555 2.02 LINK SM SM A1446 OE2 GLU A 421 1555 1555 3.20 LINK SM SM A1447 OE1 GLU A 425 1555 1555 2.97 LINK SM SM A1447 OE1 GLU A 428 1555 1555 3.19 LINK SM SM A1448 O HOH A2056 1555 1555 2.13 LINK SM SM A1448 O HOH A2055 1555 1555 2.13 LINK OE1 GLU B 119 SM SM B1445 1555 1555 1.81 LINK OE1 GLU B 124 SM SM B1446 1555 1555 1.83 LINK NZ LYS B 211 C4A PLP B1211 1555 1555 1.34 LINK SM SM B1445 O HOH B2021 1555 1555 3.44 LINK SM SM B1445 O HOH B2013 1555 1555 3.42 LINK SM SM B1445 O HOH B2022 1555 1555 3.46 LINK SM SM B1446 OE2 GLU B 124 1555 1555 3.00 LINK SM SM B1447 O HOH B2040 1555 1555 3.07 LINK SM SM B1447 OE1 GLU B 301 1555 1555 2.65 LINK SM SM B1447 OE2 GLU B 301 1555 1555 2.59 CISPEP 1 VAL A 23 PRO A 24 0 2.13 CISPEP 2 TYR A 154 PRO A 155 0 -7.71 CISPEP 3 TYR A 402 PRO A 403 0 0.74 CISPEP 4 PRO A 403 PRO A 404 0 -4.74 CISPEP 5 VAL B 23 PRO B 24 0 1.30 CISPEP 6 TYR B 154 PRO B 155 0 -9.02 CISPEP 7 TYR B 402 PRO B 403 0 5.45 CISPEP 8 PRO B 403 PRO B 404 0 -0.11 SITE 1 AC1 14 GLY A 80 THR A 81 THR A 82 HIS A 106 SITE 2 AC1 14 ASP A 181 ALA A 183 HIS A 184 SER A 208 SITE 3 AC1 14 HIS A 210 LYS A 211 SER A 220 THR B 243 SITE 4 AC1 14 SER B 244 SER B 245 SITE 1 AC2 1 GLU A 417 SITE 1 AC3 3 ASN A 418 GLU A 421 HOH A2068 SITE 1 AC4 2 GLU A 425 GLU A 428 SITE 1 AC5 4 ASP A 351 EDO A1449 HOH A2055 HOH A2056 SITE 1 AC6 2 ASP A 351 SM A1448 SITE 1 AC7 14 THR A 243 SER A 244 SER A 245 GLY B 80 SITE 2 AC7 14 THR B 81 THR B 82 HIS B 106 ASP B 181 SITE 3 AC7 14 ALA B 183 HIS B 184 SER B 208 HIS B 210 SITE 4 AC7 14 LYS B 211 SER B 220 SITE 1 AC8 1 GLU B 119 SITE 1 AC9 1 GLU B 124 SITE 1 BC1 2 GLU B 301 HOH B2040 CRYST1 50.677 137.283 62.258 90.00 109.64 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019733 0.000000 0.007042 0.00000 SCALE2 0.000000 0.007284 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017054 0.00000