HEADER VIRAL PROTEIN 08-FEB-10 2X5C TITLE CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN ORF131 FROM PYROBACULUM TITLE 2 SPHERICAL VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN ORF131; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROBACULUM SPHERICAL VIRUS; SOURCE 3 ORGANISM_TAXID: 270161; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: C43; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.OKE,L.G.CARTER,K.A.JOHNSON,H.LIU,S.A.MCMAHON,M.F.WHITE,J.H.NAISMITH REVDAT 4 13-NOV-24 2X5C 1 REMARK LINK REVDAT 3 24-JAN-18 2X5C 1 SOURCE REVDAT 2 28-SEP-16 2X5C 1 REMARK VERSN HETSYN REVDAT 1 21-JUL-10 2X5C 0 JRNL AUTH M.OKE,L.G.CARTER,K.A.JOHNSON,H.LIU,S.A.MCMAHON,X.YAN, JRNL AUTH 2 M.KEROU,N.D.WEIKART,N.KADI,M.A.SHEIKH,S.SCHMELZ,M.DORWARD, JRNL AUTH 3 M.ZAWADZKI,C.COZENS,H.FALCONER,H.POWERS,I.M.OVERTON, JRNL AUTH 4 C.A.J.VAN NIEKERK,X.PENG,P.PATEL,R.A.GARRETT,D.PRANGISHVILI, JRNL AUTH 5 C.H.BOTTING,P.J.COOTE,D.T.F.DRYDEN,G.J.BARTON, JRNL AUTH 6 U.SCHWARZ-LINEK,G.L.CHALLIS,G.L.TAYLOR,M.F.WHITE, JRNL AUTH 7 J.H.NAISMITH JRNL TITL THE SCOTTISH STRUCTURAL PROTEOMICS FACILITY: TARGETS, JRNL TITL 2 METHODS AND OUTPUTS. JRNL REF J.STRUCT.FUNCT.GENOM. V. 11 167 2010 JRNL REFN ISSN 1345-711X JRNL PMID 20419351 JRNL DOI 10.1007/S10969-010-9090-Y REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 19587 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.8254 - 3.4378 0.99 2758 155 0.1902 0.2021 REMARK 3 2 3.4378 - 2.7314 1.00 2728 135 0.1722 0.2289 REMARK 3 3 2.7314 - 2.3869 1.00 2706 144 0.1811 0.2239 REMARK 3 4 2.3869 - 2.1690 1.00 2680 145 0.1822 0.2580 REMARK 3 5 2.1690 - 2.0137 1.00 2686 153 0.1994 0.2299 REMARK 3 6 2.0137 - 1.8951 0.99 2648 148 0.2430 0.3148 REMARK 3 7 1.8951 - 1.8003 0.89 2380 121 0.2729 0.2906 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.43 REMARK 3 B_SOL : 55.25 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 0.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01580 REMARK 3 B22 (A**2) : -0.01580 REMARK 3 B33 (A**2) : 0.03160 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 1628 REMARK 3 ANGLE : 1.543 2178 REMARK 3 CHIRALITY : 0.104 233 REMARK 3 PLANARITY : 0.007 276 REMARK 3 DIHEDRAL : 16.899 615 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 29:51) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3636 8.3802 13.1418 REMARK 3 T TENSOR REMARK 3 T11: 0.1746 T22: 0.1327 REMARK 3 T33: 0.1557 T12: -0.0500 REMARK 3 T13: -0.0422 T23: -0.0560 REMARK 3 L TENSOR REMARK 3 L11: 3.2031 L22: 3.0161 REMARK 3 L33: 1.5362 L12: 0.1559 REMARK 3 L13: 0.1143 L23: 2.1073 REMARK 3 S TENSOR REMARK 3 S11: 0.1666 S12: 0.0385 S13: -0.7157 REMARK 3 S21: -0.0655 S22: 0.0449 S23: -0.2715 REMARK 3 S31: 0.0210 S32: -0.0897 S33: -0.0766 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 52:76) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4451 -0.2007 11.7564 REMARK 3 T TENSOR REMARK 3 T11: 0.3000 T22: 0.3583 REMARK 3 T33: 0.4925 T12: -0.0701 REMARK 3 T13: 0.0292 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 4.6593 L22: 2.5217 REMARK 3 L33: 2.2877 L12: 0.7574 REMARK 3 L13: -1.9050 L23: 1.6014 REMARK 3 S TENSOR REMARK 3 S11: -0.1497 S12: 0.1937 S13: -1.3971 REMARK 3 S21: -0.3508 S22: 0.2199 S23: -0.7975 REMARK 3 S31: -0.2389 S32: 0.4530 S33: 0.0694 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 77:91) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0452 -3.8953 15.1124 REMARK 3 T TENSOR REMARK 3 T11: 0.1774 T22: 0.4433 REMARK 3 T33: 0.7482 T12: 0.0290 REMARK 3 T13: 0.1050 T23: 0.1582 REMARK 3 L TENSOR REMARK 3 L11: 1.2594 L22: 1.5991 REMARK 3 L33: 3.0854 L12: -1.1384 REMARK 3 L13: -1.2927 L23: 0.1434 REMARK 3 S TENSOR REMARK 3 S11: -0.7457 S12: -0.8954 S13: 0.2853 REMARK 3 S21: -0.4232 S22: -0.5024 S23: -0.4549 REMARK 3 S31: 0.3812 S32: 0.6677 S33: 0.9499 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 92:115) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4858 14.8804 24.6481 REMARK 3 T TENSOR REMARK 3 T11: 0.2773 T22: 0.2917 REMARK 3 T33: 0.1377 T12: -0.0514 REMARK 3 T13: 0.0017 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: 0.5757 L22: 4.2149 REMARK 3 L33: 0.2478 L12: 1.0952 REMARK 3 L13: 0.3360 L23: 1.2405 REMARK 3 S TENSOR REMARK 3 S11: 0.3448 S12: -0.3941 S13: 0.0372 REMARK 3 S21: 1.0931 S22: -0.4508 S23: 0.2597 REMARK 3 S31: 0.4095 S32: -0.2241 S33: 0.0630 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 116:127) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0933 35.0941 26.1772 REMARK 3 T TENSOR REMARK 3 T11: 0.3173 T22: 0.3023 REMARK 3 T33: 0.3184 T12: -0.0114 REMARK 3 T13: -0.0597 T23: -0.1562 REMARK 3 L TENSOR REMARK 3 L11: 1.2980 L22: 0.9352 REMARK 3 L33: 2.2346 L12: 0.7301 REMARK 3 L13: 0.3611 L23: 0.3390 REMARK 3 S TENSOR REMARK 3 S11: -0.4605 S12: 0.1941 S13: 0.5046 REMARK 3 S21: -0.1964 S22: -0.1133 S23: 0.6464 REMARK 3 S31: -0.3938 S32: -0.8198 S33: 0.5524 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 29:49) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1076 9.1678 7.1665 REMARK 3 T TENSOR REMARK 3 T11: 0.2745 T22: 0.2888 REMARK 3 T33: 0.2395 T12: 0.0791 REMARK 3 T13: -0.0239 T23: -0.0726 REMARK 3 L TENSOR REMARK 3 L11: 1.2830 L22: 4.5557 REMARK 3 L33: 1.7035 L12: 0.0590 REMARK 3 L13: 0.1679 L23: 0.2171 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: -0.3046 S13: 0.1987 REMARK 3 S21: 0.5001 S22: 0.1106 S23: -0.0910 REMARK 3 S31: -0.1869 S32: -0.2589 S33: -0.0064 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 50:72) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5694 16.9389 4.3239 REMARK 3 T TENSOR REMARK 3 T11: 0.2807 T22: 0.3286 REMARK 3 T33: 0.4189 T12: 0.1009 REMARK 3 T13: 0.0080 T23: -0.0881 REMARK 3 L TENSOR REMARK 3 L11: 3.7412 L22: 4.0580 REMARK 3 L33: 0.5001 L12: -0.5915 REMARK 3 L13: 1.2035 L23: -0.4211 REMARK 3 S TENSOR REMARK 3 S11: -0.1910 S12: -0.5742 S13: 0.3897 REMARK 3 S21: 0.1193 S22: 0.1512 S23: -0.9596 REMARK 3 S31: -0.2234 S32: -0.1838 S33: 0.0044 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 73:88) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4001 19.4655 3.4478 REMARK 3 T TENSOR REMARK 3 T11: 0.1554 T22: 0.3084 REMARK 3 T33: 0.4782 T12: 0.0374 REMARK 3 T13: 0.0153 T23: -0.1753 REMARK 3 L TENSOR REMARK 3 L11: 5.2195 L22: 2.2069 REMARK 3 L33: 2.0087 L12: -2.4412 REMARK 3 L13: -0.4127 L23: 0.3878 REMARK 3 S TENSOR REMARK 3 S11: -0.2839 S12: 0.0976 S13: 1.5072 REMARK 3 S21: -0.3651 S22: 0.5057 S23: -1.2355 REMARK 3 S31: 0.2167 S32: 0.6605 S33: -0.1205 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 89:122) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0453 -1.8245 -4.3366 REMARK 3 T TENSOR REMARK 3 T11: 0.2077 T22: 0.2236 REMARK 3 T33: 0.2136 T12: 0.0346 REMARK 3 T13: -0.0527 T23: -0.1152 REMARK 3 L TENSOR REMARK 3 L11: 1.8939 L22: 3.8523 REMARK 3 L33: 0.4817 L12: -1.6029 REMARK 3 L13: -0.6574 L23: 0.4621 REMARK 3 S TENSOR REMARK 3 S11: 0.2563 S12: 0.4249 S13: -0.3447 REMARK 3 S21: -0.7783 S22: -0.4794 S23: 0.7051 REMARK 3 S31: -0.0816 S32: -0.2567 S33: 0.1650 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 123:129) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1159 -20.8613 4.9096 REMARK 3 T TENSOR REMARK 3 T11: 0.5882 T22: 0.2763 REMARK 3 T33: 0.2946 T12: -0.0760 REMARK 3 T13: 0.1193 T23: 0.0658 REMARK 3 L TENSOR REMARK 3 L11: 1.7567 L22: 2.4739 REMARK 3 L33: 2.7936 L12: 1.1615 REMARK 3 L13: -0.0279 L23: -2.0196 REMARK 3 S TENSOR REMARK 3 S11: 0.3836 S12: -0.5272 S13: -0.4413 REMARK 3 S21: 0.5978 S22: -0.2632 S23: -0.3176 REMARK 3 S31: 0.4239 S32: -0.1223 S33: -0.0503 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN E AND RESID 1:1) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9055 4.6013 -4.1286 REMARK 3 T TENSOR REMARK 3 T11: 0.9548 T22: 0.5654 REMARK 3 T33: 0.6649 T12: 0.0931 REMARK 3 T13: 0.0860 T23: -0.0276 REMARK 3 L TENSOR REMARK 3 L11: 0.0056 L22: 0.0001 REMARK 3 L33: 0.0014 L12: 0.0001 REMARK 3 L13: -0.0028 L23: 0.0002 REMARK 3 S TENSOR REMARK 3 S11: -0.0856 S12: -2.8558 S13: 1.3393 REMARK 3 S21: 0.0834 S22: -0.0150 S23: -1.7311 REMARK 3 S31: -0.7176 S32: 1.3143 S33: -0.3012 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 1128:1128) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4428 -7.4584 17.9250 REMARK 3 T TENSOR REMARK 3 T11: 0.4444 T22: 0.5856 REMARK 3 T33: 1.5684 T12: 0.0580 REMARK 3 T13: 0.0705 T23: 0.3542 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: -0.0000 S12: 27033.16 S13: 49152.32 REMARK 3 S21:-27033.15 S22: 0.0000 S23: 0.0000 REMARK 3 S31:-49152.32 S32: 0.0000 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 1131:1131) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9148 23.3790 -1.8045 REMARK 3 T TENSOR REMARK 3 T11: 0.3654 T22: 0.3649 REMARK 3 T33: 1.0870 T12: 0.0623 REMARK 3 T13: 0.1727 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12:-1077.897 S13: 0.0000 REMARK 3 S21:1077.8975 S22: 0.0000 S23:1550.9374 REMARK 3 S31: 0.0000 S32:-1550.937 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE IS ORDERED FROM RESIDUE REMARK 3 29 TO 127 REMARK 4 REMARK 4 2X5C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1290042829. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.6 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19587 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 19.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCDE SOLVE RESOLVE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6.545% ISOPROPANOL, 0.1M TRIS-HCL, REMARK 280 PH8.5. THE CRYOPROTECTANT USED WAS 30% GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -Y,-X,-Z+1/3 REMARK 290 5555 -X+Y,Y,-Z+2/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.97267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.48633 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 42.48633 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 84.97267 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 26.94000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 46.66145 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 42.48633 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2009 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2043 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 PRO A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 7 REMARK 465 PRO A 8 REMARK 465 MET A 9 REMARK 465 PRO A 10 REMARK 465 ASN A 11 REMARK 465 LYS A 12 REMARK 465 LYS A 13 REMARK 465 GLY A 14 REMARK 465 LYS A 15 REMARK 465 SER A 16 REMARK 465 GLU A 17 REMARK 465 GLY A 18 REMARK 465 GLY A 19 REMARK 465 GLN A 20 REMARK 465 ILE A 21 REMARK 465 ARG A 22 REMARK 465 THR A 23 REMARK 465 ILE A 24 REMARK 465 PRO A 25 REMARK 465 LEU A 26 REMARK 465 LYS A 27 REMARK 465 TYR A 28 REMARK 465 GLY A 128 REMARK 465 ARG A 129 REMARK 465 LYS A 130 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLU B 3 REMARK 465 THR B 4 REMARK 465 PRO B 5 REMARK 465 GLU B 6 REMARK 465 GLY B 7 REMARK 465 PRO B 8 REMARK 465 MET B 9 REMARK 465 PRO B 10 REMARK 465 ASN B 11 REMARK 465 LYS B 12 REMARK 465 LYS B 13 REMARK 465 GLY B 14 REMARK 465 LYS B 15 REMARK 465 SER B 16 REMARK 465 GLU B 17 REMARK 465 GLY B 18 REMARK 465 GLY B 19 REMARK 465 GLN B 20 REMARK 465 ILE B 21 REMARK 465 ARG B 22 REMARK 465 THR B 23 REMARK 465 ILE B 24 REMARK 465 PRO B 25 REMARK 465 LEU B 26 REMARK 465 LYS B 27 REMARK 465 TYR B 28 REMARK 465 LYS B 130 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 91 O HOH B 2044 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 38 HH TYR A 116 4665 1.52 REMARK 500 OE1 GLU A 119 HH22 ARG B 78 4665 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 80 -10.10 -47.65 REMARK 500 GLU B 118 -72.20 -83.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1128 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 54 SG REMARK 620 2 CYS A 57 SG 139.3 REMARK 620 3 HIS A 79 NE2 107.7 93.6 REMARK 620 4 HIS A 85 ND1 128.4 76.9 102.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1131 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 54 SG REMARK 620 2 CYS B 57 SG 116.8 REMARK 620 3 HIS B 79 NE2 112.3 92.8 REMARK 620 4 HIS B 85 ND1 110.0 120.3 102.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1131 DBREF 2X5C A 1 130 UNP Q6ZYH1 Q6ZYH1_PSV 1 130 DBREF 2X5C B 1 130 UNP Q6ZYH1 Q6ZYH1_PSV 1 130 SEQADV 2X5C GLY A 0 UNP Q6ZYH1 EXPRESSION TAG SEQADV 2X5C GLY B 0 UNP Q6ZYH1 EXPRESSION TAG SEQRES 1 A 131 GLY MET GLY GLU THR PRO GLU GLY PRO MET PRO ASN LYS SEQRES 2 A 131 LYS GLY LYS SER GLU GLY GLY GLN ILE ARG THR ILE PRO SEQRES 3 A 131 LEU LYS TYR TYR LYS GLN GLU TYR ASP MET ALA ALA ASP SEQRES 4 A 131 LEU VAL ARG MET LEU ARG GLY LEU GLY VAL PHE MET HIS SEQRES 5 A 131 ALA LYS CYS PRO ARG CYS GLY ALA GLU GLY SER VAL SER SEQRES 6 A 131 ILE VAL GLU THR LYS ASN GLY TYR LYS TYR LEU VAL ILE SEQRES 7 A 131 ARG HIS PRO ASP GLY GLY THR HIS THR VAL PRO LYS THR SEQRES 8 A 131 ASP ILE SER ALA ILE LEU LYS GLU LEU CYS GLU VAL LYS SEQRES 9 A 131 LYS ASP LEU GLU TYR VAL LEU LYS ARG TYR LYS GLU TYR SEQRES 10 A 131 GLU GLU GLU GLY GLY VAL LYS PHE CYS ALA GLU GLY ARG SEQRES 11 A 131 LYS SEQRES 1 B 131 GLY MET GLY GLU THR PRO GLU GLY PRO MET PRO ASN LYS SEQRES 2 B 131 LYS GLY LYS SER GLU GLY GLY GLN ILE ARG THR ILE PRO SEQRES 3 B 131 LEU LYS TYR TYR LYS GLN GLU TYR ASP MET ALA ALA ASP SEQRES 4 B 131 LEU VAL ARG MET LEU ARG GLY LEU GLY VAL PHE MET HIS SEQRES 5 B 131 ALA LYS CYS PRO ARG CYS GLY ALA GLU GLY SER VAL SER SEQRES 6 B 131 ILE VAL GLU THR LYS ASN GLY TYR LYS TYR LEU VAL ILE SEQRES 7 B 131 ARG HIS PRO ASP GLY GLY THR HIS THR VAL PRO LYS THR SEQRES 8 B 131 ASP ILE SER ALA ILE LEU LYS GLU LEU CYS GLU VAL LYS SEQRES 9 B 131 LYS ASP LEU GLU TYR VAL LEU LYS ARG TYR LYS GLU TYR SEQRES 10 B 131 GLU GLU GLU GLY GLY VAL LYS PHE CYS ALA GLU GLY ARG SEQRES 11 B 131 LYS HET ZN A1128 1 HET GOL B1130 14 HET ZN B1131 1 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 GOL C3 H8 O3 FORMUL 6 HOH *115(H2 O) HELIX 1 1 TYR A 29 GLY A 47 1 19 HELIX 2 2 ILE A 92 GLU A 119 1 28 HELIX 3 3 TYR B 29 GLY B 47 1 19 HELIX 4 4 ILE B 92 GLU B 119 1 28 SHEET 1 AA 4 HIS A 51 LYS A 53 0 SHEET 2 AA 4 GLU A 60 GLU A 67 -1 O GLY A 61 N ALA A 52 SHEET 3 AA 4 LYS A 73 ARG A 78 -1 O TYR A 74 N VAL A 66 SHEET 4 AA 4 THR A 84 THR A 86 -1 O HIS A 85 N ILE A 77 SHEET 1 BA 4 HIS B 51 LYS B 53 0 SHEET 2 BA 4 GLU B 60 GLU B 67 -1 O GLY B 61 N ALA B 52 SHEET 3 BA 4 LYS B 73 ARG B 78 -1 O TYR B 74 N VAL B 66 SHEET 4 BA 4 THR B 84 THR B 86 -1 O HIS B 85 N ILE B 77 SSBOND 1 CYS A 100 CYS A 125 1555 4665 2.05 SSBOND 2 CYS B 100 CYS B 125 1555 6555 2.06 LINK SG CYS A 54 ZN ZN A1128 1555 1555 2.26 LINK SG CYS A 57 ZN ZN A1128 1555 1555 2.19 LINK NE2 HIS A 79 ZN ZN A1128 1555 1555 2.20 LINK ND1 HIS A 85 ZN ZN A1128 1555 1555 2.25 LINK SG CYS B 54 ZN ZN B1131 1555 1555 2.28 LINK SG CYS B 57 ZN ZN B1131 1555 1555 2.33 LINK NE2 HIS B 79 ZN ZN B1131 1555 1555 2.10 LINK ND1 HIS B 85 ZN ZN B1131 1555 1555 2.09 SITE 1 AC1 6 TYR A 29 GLY B 45 LEU B 46 GLY B 47 SITE 2 AC1 6 VAL B 48 PHE B 49 SITE 1 AC2 4 CYS A 54 CYS A 57 HIS A 79 HIS A 85 SITE 1 AC3 4 CYS B 54 CYS B 57 HIS B 79 HIS B 85 CRYST1 53.880 53.880 127.459 90.00 90.00 120.00 P 32 1 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018560 0.010715 0.000000 0.00000 SCALE2 0.000000 0.021431 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007846 0.00000