data_2X5P # _entry.id 2X5P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2X5P PDBE EBI-42856 WWPDB D_1290042856 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2X5P _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-02-10 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Oke, M.' 1 'Carter, L.G.' 2 'Johnson, K.A.' 3 'Liu, H.' 4 'Mcmahon, S.A.' 5 'White, M.F.' 6 'Naismith, J.H.' 7 # _citation.id primary _citation.title 'The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.' _citation.journal_abbrev J.Struct.Funct.Genomics _citation.journal_volume 11 _citation.page_first 167 _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM ? _citation.country NE _citation.journal_id_ISSN 1345-711X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20419351 _citation.pdbx_database_id_DOI 10.1007/S10969-010-9090-Y # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Oke, M.' 1 ? primary 'Carter, L.G.' 2 ? primary 'Johnson, K.A.' 3 ? primary 'Liu, H.' 4 ? primary 'Mcmahon, S.A.' 5 ? primary 'Yan, X.' 6 ? primary 'Kerou, M.' 7 ? primary 'Weikart, N.D.' 8 ? primary 'Kadi, N.' 9 ? primary 'Sheikh, M.A.' 10 ? primary 'Schmelz, S.' 11 ? primary 'Dorward, M.' 12 ? primary 'Zawadzki, M.' 13 ? primary 'Cozens, C.' 14 ? primary 'Falconer, H.' 15 ? primary 'Powers, H.' 16 ? primary 'Overton, I.M.' 17 ? primary 'Van Niekerk, C.A.J.' 18 ? primary 'Peng, X.' 19 ? primary 'Patel, P.' 20 ? primary 'Garrett, R.A.' 21 ? primary 'Prangishvili, D.' 22 ? primary 'Botting, C.H.' 23 ? primary 'Coote, P.J.' 24 ? primary 'Dryden, D.T.F.' 25 ? primary 'Barton, G.J.' 26 ? primary 'Schwarz-Linek, U.' 27 ? primary 'Challis, G.L.' 28 ? primary 'Taylor, G.L.' 29 ? primary 'White, M.F.' 30 ? primary 'Naismith, J.H.' 31 ? # _cell.entry_id 2X5P _cell.length_a 57.220 _cell.length_b 57.220 _cell.length_c 64.580 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X5P _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FIBRONECTIN BINDING PROTEIN' 12883.226 1 ? ? 'B DOMAIN, RESIDUES 440-557' 'ISO-PEPTIDE BOND BETWEEN SIDECHAINS OF LYS31 AND ASP117' 2 water nat water 18.015 103 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name FBA2 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMVDTLSGLSSEQGQSGDMTIEEDSATHIKFSKRDIDGKELAGATMELRDSSGKTISTWISDGQVKDFYLMPGKYTFVE TAAPDGYEVATAITFTVNEQGQVTVNGKATKGDAHIVMVDA ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMVDTLSGLSSEQGQSGDMTIEEDSATHIKFSKRDIDGKELAGATMELRDSSGKTISTWISDGQVKDFYLMPGKYTFVE TAAPDGYEVATAITFTVNEQGQVTVNGKATKGDAHIVMVDA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 VAL n 1 5 ASP n 1 6 THR n 1 7 LEU n 1 8 SER n 1 9 GLY n 1 10 LEU n 1 11 SER n 1 12 SER n 1 13 GLU n 1 14 GLN n 1 15 GLY n 1 16 GLN n 1 17 SER n 1 18 GLY n 1 19 ASP n 1 20 MET n 1 21 THR n 1 22 ILE n 1 23 GLU n 1 24 GLU n 1 25 ASP n 1 26 SER n 1 27 ALA n 1 28 THR n 1 29 HIS n 1 30 ILE n 1 31 LYS n 1 32 PHE n 1 33 SER n 1 34 LYS n 1 35 ARG n 1 36 ASP n 1 37 ILE n 1 38 ASP n 1 39 GLY n 1 40 LYS n 1 41 GLU n 1 42 LEU n 1 43 ALA n 1 44 GLY n 1 45 ALA n 1 46 THR n 1 47 MET n 1 48 GLU n 1 49 LEU n 1 50 ARG n 1 51 ASP n 1 52 SER n 1 53 SER n 1 54 GLY n 1 55 LYS n 1 56 THR n 1 57 ILE n 1 58 SER n 1 59 THR n 1 60 TRP n 1 61 ILE n 1 62 SER n 1 63 ASP n 1 64 GLY n 1 65 GLN n 1 66 VAL n 1 67 LYS n 1 68 ASP n 1 69 PHE n 1 70 TYR n 1 71 LEU n 1 72 MET n 1 73 PRO n 1 74 GLY n 1 75 LYS n 1 76 TYR n 1 77 THR n 1 78 PHE n 1 79 VAL n 1 80 GLU n 1 81 THR n 1 82 ALA n 1 83 ALA n 1 84 PRO n 1 85 ASP n 1 86 GLY n 1 87 TYR n 1 88 GLU n 1 89 VAL n 1 90 ALA n 1 91 THR n 1 92 ALA n 1 93 ILE n 1 94 THR n 1 95 PHE n 1 96 THR n 1 97 VAL n 1 98 ASN n 1 99 GLU n 1 100 GLN n 1 101 GLY n 1 102 GLN n 1 103 VAL n 1 104 THR n 1 105 VAL n 1 106 ASN n 1 107 GLY n 1 108 LYS n 1 109 ALA n 1 110 THR n 1 111 LYS n 1 112 GLY n 1 113 ASP n 1 114 ALA n 1 115 HIS n 1 116 ILE n 1 117 VAL n 1 118 MET n 1 119 VAL n 1 120 ASP n 1 121 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'STREPTOCOCCUS PYOGENES' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1314 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant C43 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PDEST14 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8G9G1_STRPY _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q8G9G1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2X5P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 121 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8G9G1 _struct_ref_seq.db_align_beg 440 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 557 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 118 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2X5P GLY A 1 ? UNP Q8G9G1 ? ? 'expression tag' -2 1 1 2X5P ALA A 2 ? UNP Q8G9G1 ? ? 'expression tag' -1 2 1 2X5P MET A 3 ? UNP Q8G9G1 ? ? 'expression tag' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2X5P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.4 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;2.47 - 2.52M AMMONIUM SULFATE, 0.26M MAGNESIUM ACETATE OR 0.21M MAGNESIUM CHLORIDE, 0.1M BICINE PH 8.5 - 9.5. CRYSTAL WAS CRYOPROTECTED DIRECTLY IN THIS SOLUTION SUPPLEMENTED WITH 25% GLYCEROL. ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-05-17 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.8 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2X5P _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 1.64 _reflns.d_resolution_high 1.60 _reflns.number_obs 15019 _reflns.number_all ? _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.64 _reflns_shell.percent_possible_all 96.7 _reflns_shell.Rmerge_I_obs 0.43 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.40 _reflns_shell.pdbx_redundancy 1.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2X5P _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15019 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.06 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.138 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.136 _refine.ls_R_factor_R_free 0.170 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 789 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.966 _refine.B_iso_mean 16.74 _refine.aniso_B[1][1] 0.05 _refine.aniso_B[2][2] 0.05 _refine.aniso_B[3][3] -0.08 _refine.aniso_B[1][2] 0.03 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.079 _refine.pdbx_overall_ESU_R_Free 0.067 _refine.overall_SU_ML 0.043 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.714 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 779 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 882 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 27.06 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 796 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 511 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.235 1.943 ? 1075 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.773 3.000 ? 1262 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.189 5.000 ? 104 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.252 25.625 ? 32 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.340 15.000 ? 136 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10.974 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.073 0.200 ? 127 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 883 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 150 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.063 1.500 ? 513 'X-RAY DIFFRACTION' ? r_mcbond_other 0.349 1.500 ? 215 'X-RAY DIFFRACTION' ? r_mcangle_it 1.822 2.000 ? 825 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.560 3.000 ? 283 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.001 4.500 ? 249 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 4.308 3.000 ? 4285 'X-RAY DIFFRACTION' ? r_sphericity_free 8.762 5.000 ? 103 'X-RAY DIFFRACTION' ? r_sphericity_bonded 4.757 5.000 ? 1294 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.60 _refine_ls_shell.d_res_low 1.64 _refine_ls_shell.number_reflns_R_work 1099 _refine_ls_shell.R_factor_R_work 0.1630 _refine_ls_shell.percent_reflns_obs 99.48 _refine_ls_shell.R_factor_R_free 0.2380 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2X5P _struct.title 'Crystal structure of the Streptococcus pyogenes fibronectin binding protein Fbab-B' _struct.pdbx_descriptor 'FIBRONECTIN BINDING PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2X5P _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 3 ? AB ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LYS A 67 ? LEU A 71 ? LYS A 64 LEU A 68 AA 2 THR A 28 ? ARG A 35 ? THR A 25 ARG A 32 AA 3 HIS A 115 ? VAL A 119 ? HIS A 112 VAL A 116 AB 1 THR A 56 ? ILE A 61 ? THR A 53 ILE A 58 AB 2 THR A 46 ? ARG A 50 ? THR A 43 ARG A 47 AB 3 GLY A 74 ? ALA A 82 ? GLY A 71 ALA A 79 AB 4 ILE A 93 ? VAL A 97 ? ILE A 90 VAL A 94 AB 5 VAL A 103 ? VAL A 105 ? VAL A 100 VAL A 102 AB 6 LYS A 108 ? THR A 110 ? LYS A 105 THR A 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 71 ? N LEU A 68 O THR A 28 ? O THR A 25 AA 2 3 N SER A 33 ? N SER A 30 O ILE A 116 ? O ILE A 113 AB 1 2 N TRP A 60 ? N TRP A 57 O MET A 47 ? O MET A 44 AB 2 3 N ARG A 50 ? N ARG A 47 O THR A 77 ? O THR A 74 AB 3 4 N PHE A 78 ? N PHE A 75 O ILE A 93 ? O ILE A 90 AB 4 5 N THR A 96 ? N THR A 93 O THR A 104 ? O THR A 101 AB 5 6 N VAL A 105 ? N VAL A 102 O LYS A 108 ? O LYS A 105 # _database_PDB_matrix.entry_id 2X5P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2X5P _atom_sites.fract_transf_matrix[1][1] 0.017476 _atom_sites.fract_transf_matrix[1][2] 0.010090 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020180 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015485 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 -2 GLY GLY A . n A 1 2 ALA 2 -1 -1 ALA ALA A . n A 1 3 MET 3 0 0 MET MET A . n A 1 4 VAL 4 1 1 VAL VAL A . n A 1 5 ASP 5 2 2 ASP ASP A . n A 1 6 THR 6 3 3 THR THR A . n A 1 7 LEU 7 4 4 LEU LEU A . n A 1 8 SER 8 5 ? ? ? A . n A 1 9 GLY 9 6 ? ? ? A . n A 1 10 LEU 10 7 ? ? ? A . n A 1 11 SER 11 8 ? ? ? A . n A 1 12 SER 12 9 ? ? ? A . n A 1 13 GLU 13 10 ? ? ? A . n A 1 14 GLN 14 11 ? ? ? A . n A 1 15 GLY 15 12 ? ? ? A . n A 1 16 GLN 16 13 ? ? ? A . n A 1 17 SER 17 14 ? ? ? A . n A 1 18 GLY 18 15 ? ? ? A . n A 1 19 ASP 19 16 ? ? ? A . n A 1 20 MET 20 17 ? ? ? A . n A 1 21 THR 21 18 ? ? ? A . n A 1 22 ILE 22 19 ? ? ? A . n A 1 23 GLU 23 20 ? ? ? A . n A 1 24 GLU 24 21 ? ? ? A . n A 1 25 ASP 25 22 22 ASP ASP A . n A 1 26 SER 26 23 23 SER SER A . n A 1 27 ALA 27 24 24 ALA ALA A . n A 1 28 THR 28 25 25 THR THR A . n A 1 29 HIS 29 26 26 HIS HIS A . n A 1 30 ILE 30 27 27 ILE ILE A . n A 1 31 LYS 31 28 28 LYS LYS A . n A 1 32 PHE 32 29 29 PHE PHE A . n A 1 33 SER 33 30 30 SER SER A . n A 1 34 LYS 34 31 31 LYS LYS A . n A 1 35 ARG 35 32 32 ARG ARG A . n A 1 36 ASP 36 33 33 ASP ASP A . n A 1 37 ILE 37 34 34 ILE ILE A . n A 1 38 ASP 38 35 35 ASP ASP A . n A 1 39 GLY 39 36 36 GLY GLY A . n A 1 40 LYS 40 37 37 LYS LYS A . n A 1 41 GLU 41 38 38 GLU GLU A . n A 1 42 LEU 42 39 39 LEU LEU A . n A 1 43 ALA 43 40 40 ALA ALA A . n A 1 44 GLY 44 41 41 GLY GLY A . n A 1 45 ALA 45 42 42 ALA ALA A . n A 1 46 THR 46 43 43 THR THR A . n A 1 47 MET 47 44 44 MET MET A . n A 1 48 GLU 48 45 45 GLU GLU A . n A 1 49 LEU 49 46 46 LEU LEU A . n A 1 50 ARG 50 47 47 ARG ARG A . n A 1 51 ASP 51 48 48 ASP ASP A . n A 1 52 SER 52 49 49 SER SER A . n A 1 53 SER 53 50 50 SER SER A . n A 1 54 GLY 54 51 51 GLY GLY A . n A 1 55 LYS 55 52 52 LYS LYS A . n A 1 56 THR 56 53 53 THR THR A . n A 1 57 ILE 57 54 54 ILE ILE A . n A 1 58 SER 58 55 55 SER SER A . n A 1 59 THR 59 56 56 THR THR A . n A 1 60 TRP 60 57 57 TRP TRP A . n A 1 61 ILE 61 58 58 ILE ILE A . n A 1 62 SER 62 59 59 SER SER A . n A 1 63 ASP 63 60 60 ASP ASP A . n A 1 64 GLY 64 61 61 GLY GLY A . n A 1 65 GLN 65 62 62 GLN GLN A . n A 1 66 VAL 66 63 63 VAL VAL A . n A 1 67 LYS 67 64 64 LYS LYS A . n A 1 68 ASP 68 65 65 ASP ASP A . n A 1 69 PHE 69 66 66 PHE PHE A . n A 1 70 TYR 70 67 67 TYR TYR A . n A 1 71 LEU 71 68 68 LEU LEU A . n A 1 72 MET 72 69 69 MET MET A . n A 1 73 PRO 73 70 70 PRO PRO A . n A 1 74 GLY 74 71 71 GLY GLY A . n A 1 75 LYS 75 72 72 LYS LYS A . n A 1 76 TYR 76 73 73 TYR TYR A . n A 1 77 THR 77 74 74 THR THR A . n A 1 78 PHE 78 75 75 PHE PHE A . n A 1 79 VAL 79 76 76 VAL VAL A . n A 1 80 GLU 80 77 77 GLU GLU A . n A 1 81 THR 81 78 78 THR THR A . n A 1 82 ALA 82 79 79 ALA ALA A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 PRO 84 81 81 PRO PRO A . n A 1 85 ASP 85 82 82 ASP ASP A . n A 1 86 GLY 86 83 83 GLY GLY A . n A 1 87 TYR 87 84 84 TYR TYR A . n A 1 88 GLU 88 85 85 GLU GLU A . n A 1 89 VAL 89 86 86 VAL VAL A . n A 1 90 ALA 90 87 87 ALA ALA A . n A 1 91 THR 91 88 88 THR THR A . n A 1 92 ALA 92 89 89 ALA ALA A . n A 1 93 ILE 93 90 90 ILE ILE A . n A 1 94 THR 94 91 91 THR THR A . n A 1 95 PHE 95 92 92 PHE PHE A . n A 1 96 THR 96 93 93 THR THR A . n A 1 97 VAL 97 94 94 VAL VAL A . n A 1 98 ASN 98 95 95 ASN ASN A . n A 1 99 GLU 99 96 96 GLU GLU A . n A 1 100 GLN 100 97 97 GLN GLN A . n A 1 101 GLY 101 98 98 GLY GLY A . n A 1 102 GLN 102 99 99 GLN GLN A . n A 1 103 VAL 103 100 100 VAL VAL A . n A 1 104 THR 104 101 101 THR THR A . n A 1 105 VAL 105 102 102 VAL VAL A . n A 1 106 ASN 106 103 103 ASN ASN A . n A 1 107 GLY 107 104 104 GLY GLY A . n A 1 108 LYS 108 105 105 LYS LYS A . n A 1 109 ALA 109 106 106 ALA ALA A . n A 1 110 THR 110 107 107 THR THR A . n A 1 111 LYS 111 108 108 LYS LYS A . n A 1 112 GLY 112 109 109 GLY GLY A . n A 1 113 ASP 113 110 110 ASP ASP A . n A 1 114 ALA 114 111 111 ALA ALA A . n A 1 115 HIS 115 112 112 HIS HIS A . n A 1 116 ILE 116 113 113 ILE ILE A . n A 1 117 VAL 117 114 114 VAL VAL A . n A 1 118 MET 118 115 115 MET MET A . n A 1 119 VAL 119 116 116 VAL VAL A . n A 1 120 ASP 120 117 117 ASP ASP A . n A 1 121 ALA 121 118 118 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . B 2 HOH 9 2009 2009 HOH HOH A . B 2 HOH 10 2010 2010 HOH HOH A . B 2 HOH 11 2011 2011 HOH HOH A . B 2 HOH 12 2012 2012 HOH HOH A . B 2 HOH 13 2013 2013 HOH HOH A . B 2 HOH 14 2014 2014 HOH HOH A . B 2 HOH 15 2015 2015 HOH HOH A . B 2 HOH 16 2016 2016 HOH HOH A . B 2 HOH 17 2017 2017 HOH HOH A . B 2 HOH 18 2018 2018 HOH HOH A . B 2 HOH 19 2019 2019 HOH HOH A . B 2 HOH 20 2020 2020 HOH HOH A . B 2 HOH 21 2021 2021 HOH HOH A . B 2 HOH 22 2022 2022 HOH HOH A . B 2 HOH 23 2023 2023 HOH HOH A . B 2 HOH 24 2024 2024 HOH HOH A . B 2 HOH 25 2025 2025 HOH HOH A . B 2 HOH 26 2026 2026 HOH HOH A . B 2 HOH 27 2027 2027 HOH HOH A . B 2 HOH 28 2028 2028 HOH HOH A . B 2 HOH 29 2029 2029 HOH HOH A . B 2 HOH 30 2030 2030 HOH HOH A . B 2 HOH 31 2031 2031 HOH HOH A . B 2 HOH 32 2032 2032 HOH HOH A . B 2 HOH 33 2033 2033 HOH HOH A . B 2 HOH 34 2034 2034 HOH HOH A . B 2 HOH 35 2035 2035 HOH HOH A . B 2 HOH 36 2036 2036 HOH HOH A . B 2 HOH 37 2037 2037 HOH HOH A . B 2 HOH 38 2038 2038 HOH HOH A . B 2 HOH 39 2039 2039 HOH HOH A . B 2 HOH 40 2040 2040 HOH HOH A . B 2 HOH 41 2041 2041 HOH HOH A . B 2 HOH 42 2042 2042 HOH HOH A . B 2 HOH 43 2043 2043 HOH HOH A . B 2 HOH 44 2044 2044 HOH HOH A . B 2 HOH 45 2045 2045 HOH HOH A . B 2 HOH 46 2046 2046 HOH HOH A . B 2 HOH 47 2047 2047 HOH HOH A . B 2 HOH 48 2048 2048 HOH HOH A . B 2 HOH 49 2049 2049 HOH HOH A . B 2 HOH 50 2050 2050 HOH HOH A . B 2 HOH 51 2051 2051 HOH HOH A . B 2 HOH 52 2052 2052 HOH HOH A . B 2 HOH 53 2053 2053 HOH HOH A . B 2 HOH 54 2054 2054 HOH HOH A . B 2 HOH 55 2055 2055 HOH HOH A . B 2 HOH 56 2056 2056 HOH HOH A . B 2 HOH 57 2057 2057 HOH HOH A . B 2 HOH 58 2058 2058 HOH HOH A . B 2 HOH 59 2059 2059 HOH HOH A . B 2 HOH 60 2060 2060 HOH HOH A . B 2 HOH 61 2061 2061 HOH HOH A . B 2 HOH 62 2062 2062 HOH HOH A . B 2 HOH 63 2063 2063 HOH HOH A . B 2 HOH 64 2064 2064 HOH HOH A . B 2 HOH 65 2065 2065 HOH HOH A . B 2 HOH 66 2066 2066 HOH HOH A . B 2 HOH 67 2067 2067 HOH HOH A . B 2 HOH 68 2068 2068 HOH HOH A . B 2 HOH 69 2069 2069 HOH HOH A . B 2 HOH 70 2070 2070 HOH HOH A . B 2 HOH 71 2071 2071 HOH HOH A . B 2 HOH 72 2072 2072 HOH HOH A . B 2 HOH 73 2073 2073 HOH HOH A . B 2 HOH 74 2074 2074 HOH HOH A . B 2 HOH 75 2075 2075 HOH HOH A . B 2 HOH 76 2076 2076 HOH HOH A . B 2 HOH 77 2077 2077 HOH HOH A . B 2 HOH 78 2078 2078 HOH HOH A . B 2 HOH 79 2079 2079 HOH HOH A . B 2 HOH 80 2080 2080 HOH HOH A . B 2 HOH 81 2081 2081 HOH HOH A . B 2 HOH 82 2082 2082 HOH HOH A . B 2 HOH 83 2083 2083 HOH HOH A . B 2 HOH 84 2084 2084 HOH HOH A . B 2 HOH 85 2085 2085 HOH HOH A . B 2 HOH 86 2086 2086 HOH HOH A . B 2 HOH 87 2087 2087 HOH HOH A . B 2 HOH 88 2088 2088 HOH HOH A . B 2 HOH 89 2089 2089 HOH HOH A . B 2 HOH 90 2090 2090 HOH HOH A . B 2 HOH 91 2091 2091 HOH HOH A . B 2 HOH 92 2092 2092 HOH HOH A . B 2 HOH 93 2093 2093 HOH HOH A . B 2 HOH 94 2094 2094 HOH HOH A . B 2 HOH 95 2095 2095 HOH HOH A . B 2 HOH 96 2096 2096 HOH HOH A . B 2 HOH 97 2097 2097 HOH HOH A . B 2 HOH 98 2098 2098 HOH HOH A . B 2 HOH 99 2099 2099 HOH HOH A . B 2 HOH 100 2100 2100 HOH HOH A . B 2 HOH 101 2101 2101 HOH HOH A . B 2 HOH 102 2102 2102 HOH HOH A . B 2 HOH 103 2103 2103 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-01 2 'Structure model' 1 1 2011-08-10 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2019-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other 4 2 'Structure model' 'Source and taxonomy' 5 2 'Structure model' 'Structure summary' 6 2 'Structure model' 'Version format compliance' 7 3 'Structure model' 'Source and taxonomy' 8 4 'Structure model' Advisory 9 4 'Structure model' 'Data collection' 10 4 'Structure model' 'Derived calculations' 11 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 4 4 'Structure model' pdbx_validate_close_contact 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 2 3 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 3 3 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 4 3 'Structure model' '_entity_src_gen.pdbx_host_org_variant' 5 4 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 59.9091 19.7181 11.7364 0.0919 0.0152 0.0315 -0.0114 -0.0239 0.0095 5.1171 0.3948 0.7239 0.5100 0.5169 0.2088 0.0832 -0.1180 -0.2160 0.0160 0.0222 -0.0804 0.2432 -0.0304 -0.1054 'X-RAY DIFFRACTION' 2 ? refined 57.1586 26.2469 7.5345 0.0234 0.0084 0.0205 0.0076 -0.0107 -0.0012 0.9102 0.0873 1.8857 0.1304 1.1225 0.3295 -0.0011 -0.0100 0.0264 0.0306 0.0065 0.0027 0.1028 0.0223 -0.0055 'X-RAY DIFFRACTION' 3 ? refined 45.1618 12.5561 15.0630 0.1583 0.1528 0.1613 0.0080 -0.0124 0.0307 7.3168 38.9118 2.3668 -6.5296 -0.1800 -2.0853 -0.1630 0.0040 0.1092 0.8987 -0.1372 -2.2848 0.2439 0.5039 0.3003 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 25 ? ? A 32 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 62 ? ? A 68 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 110 ? ? A 117 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 A 89 ? ? A 108 ? ? ? ? 'X-RAY DIFFRACTION' 5 2 A 71 ? ? A 79 ? ? ? ? 'X-RAY DIFFRACTION' 6 2 A 41 ? ? A 47 ? ? ? ? 'X-RAY DIFFRACTION' 7 2 A 54 ? ? A 59 ? ? ? ? 'X-RAY DIFFRACTION' 8 3 A -2 ? ? A 4 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.6.0081 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 SHELXCDE phasing 'SOLVE RESOLVE' ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 31 ? ? CG A ASP 117 ? ? 1.25 2 1 N A ASP 22 ? ? O A HOH 2002 ? ? 2.00 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id ASP _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 117 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OD1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id ASP _pdbx_unobs_or_zero_occ_atoms.label_seq_id 120 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OD1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 5 ? A SER 8 2 1 Y 1 A GLY 6 ? A GLY 9 3 1 Y 1 A LEU 7 ? A LEU 10 4 1 Y 1 A SER 8 ? A SER 11 5 1 Y 1 A SER 9 ? A SER 12 6 1 Y 1 A GLU 10 ? A GLU 13 7 1 Y 1 A GLN 11 ? A GLN 14 8 1 Y 1 A GLY 12 ? A GLY 15 9 1 Y 1 A GLN 13 ? A GLN 16 10 1 Y 1 A SER 14 ? A SER 17 11 1 Y 1 A GLY 15 ? A GLY 18 12 1 Y 1 A ASP 16 ? A ASP 19 13 1 Y 1 A MET 17 ? A MET 20 14 1 Y 1 A THR 18 ? A THR 21 15 1 Y 1 A ILE 19 ? A ILE 22 16 1 Y 1 A GLU 20 ? A GLU 23 17 1 Y 1 A GLU 21 ? A GLU 24 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #