HEADER TRANSFERASE 14-FEB-10 2X63 TITLE CRYSTAL STRUCTURE OF THE SIALYLTRANSFERASE CST-II N51A IN COMPLEX WITH TITLE 2 CMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-2,3-/2,8-SIALYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 2-259; COMPND 5 SYNONYM: ALPHA-2\,3/8-SIALYLTRANSFERASE, SIALYLTRANSFERASE CST-II; COMPND 6 EC: 2.4.99.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 STRAIN: OH4384; SOURCE 5 ATCC: 43446; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET-28 KEYWDS GLYCOSYLTRANSFERASE, GTA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.LEE,L.L.LAIRSON,J.R.RICH,W.W.WAKARCHUK,S.G.WITHERS, AUTHOR 2 N.C.J.STRYNADKA REVDAT 4 20-DEC-23 2X63 1 REMARK REVDAT 3 19-OCT-11 2X63 1 JRNL REVDAT 2 28-SEP-11 2X63 1 JRNL REMARK VERSN REVDAT 1 23-FEB-11 2X63 0 JRNL AUTH H.J.LEE,L.L.LAIRSON,J.R.RICH,E.LAMEIGNERE,W.W.WAKARCHUK, JRNL AUTH 2 S.G.WITHERS,N.C.J.STRYNADKA JRNL TITL STRUCTURAL AND KINETIC ANALYSIS OF SUBSTRATE BINDING TO THE JRNL TITL 2 SIALYLTRANSFERASE CST-II FROM CAMPYLOBACTER JEJUNI. JRNL REF J.BIOL.CHEM. V. 286 35922 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21832050 JRNL DOI 10.1074/JBC.M111.261172 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 20305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1098 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1468 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.3020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2147 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 176 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.42000 REMARK 3 B22 (A**2) : -1.42000 REMARK 3 B33 (A**2) : 2.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.176 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.160 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.351 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2244 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3034 ; 0.986 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 263 ; 5.266 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;33.070 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 382 ;13.101 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 3.821 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 312 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1733 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1295 ; 0.393 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2088 ; 0.750 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 949 ; 1.299 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 943 ; 2.039 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 14 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6467 -12.9207 -9.3698 REMARK 3 T TENSOR REMARK 3 T11: 0.0440 T22: 0.0648 REMARK 3 T33: 0.1331 T12: 0.0033 REMARK 3 T13: -0.0196 T23: 0.0435 REMARK 3 L TENSOR REMARK 3 L11: 5.9085 L22: 3.3553 REMARK 3 L33: 4.7092 L12: -0.6329 REMARK 3 L13: 0.8690 L23: 1.1424 REMARK 3 S TENSOR REMARK 3 S11: -0.1265 S12: -0.1479 S13: -0.2800 REMARK 3 S21: 0.1453 S22: 0.0450 S23: -0.3784 REMARK 3 S31: 0.0969 S32: -0.1574 S33: 0.0815 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 26 REMARK 3 ORIGIN FOR THE GROUP (A): 39.8143 -15.6491 -2.3027 REMARK 3 T TENSOR REMARK 3 T11: 0.1292 T22: 0.2905 REMARK 3 T33: 0.2049 T12: 0.0323 REMARK 3 T13: -0.1430 T23: 0.0782 REMARK 3 L TENSOR REMARK 3 L11: 9.8172 L22: 1.6771 REMARK 3 L33: 5.5290 L12: -1.3130 REMARK 3 L13: 7.3273 L23: -0.7139 REMARK 3 S TENSOR REMARK 3 S11: -0.0015 S12: -1.0483 S13: -0.3470 REMARK 3 S21: 0.4407 S22: 0.3044 S23: -0.4209 REMARK 3 S31: 0.0623 S32: -0.7097 S33: -0.3028 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 85 REMARK 3 ORIGIN FOR THE GROUP (A): 24.6278 -17.6156 -15.5856 REMARK 3 T TENSOR REMARK 3 T11: 0.0707 T22: 0.0520 REMARK 3 T33: 0.1328 T12: 0.0049 REMARK 3 T13: 0.0104 T23: 0.0406 REMARK 3 L TENSOR REMARK 3 L11: 2.2858 L22: 1.0904 REMARK 3 L33: 0.3097 L12: -0.5687 REMARK 3 L13: 0.5122 L23: 0.1352 REMARK 3 S TENSOR REMARK 3 S11: 0.0190 S12: -0.0361 S13: -0.3270 REMARK 3 S21: 0.0649 S22: 0.0073 S23: -0.0739 REMARK 3 S31: 0.0395 S32: 0.0360 S33: -0.0262 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9457 -4.9116 -14.6738 REMARK 3 T TENSOR REMARK 3 T11: 0.0975 T22: 0.0981 REMARK 3 T33: 0.0391 T12: 0.0125 REMARK 3 T13: -0.0037 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 1.4233 L22: 2.5414 REMARK 3 L33: 0.1824 L12: 0.9340 REMARK 3 L13: 0.0850 L23: 0.5465 REMARK 3 S TENSOR REMARK 3 S11: 0.0101 S12: -0.0188 S13: 0.0445 REMARK 3 S21: 0.0715 S22: -0.0300 S23: -0.0166 REMARK 3 S31: -0.0304 S32: -0.0270 S33: 0.0200 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 159 REMARK 3 ORIGIN FOR THE GROUP (A): 30.1562 -1.3150 -13.8701 REMARK 3 T TENSOR REMARK 3 T11: 0.0558 T22: 0.0813 REMARK 3 T33: 0.0790 T12: -0.0128 REMARK 3 T13: -0.0236 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 1.4663 L22: 1.9257 REMARK 3 L33: 0.8529 L12: -0.4898 REMARK 3 L13: -0.0998 L23: -0.6334 REMARK 3 S TENSOR REMARK 3 S11: -0.0082 S12: -0.0843 S13: 0.0389 REMARK 3 S21: 0.0250 S22: -0.0498 S23: -0.3444 REMARK 3 S31: 0.0261 S32: 0.0955 S33: 0.0580 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 160 A 184 REMARK 3 ORIGIN FOR THE GROUP (A): 32.6385 -14.9866 -29.5167 REMARK 3 T TENSOR REMARK 3 T11: 0.0696 T22: 0.2215 REMARK 3 T33: 0.1032 T12: -0.0752 REMARK 3 T13: 0.0545 T23: -0.0505 REMARK 3 L TENSOR REMARK 3 L11: 3.4027 L22: 4.3006 REMARK 3 L33: 4.4309 L12: -0.1046 REMARK 3 L13: 1.4403 L23: 0.3781 REMARK 3 S TENSOR REMARK 3 S11: -0.2356 S12: 0.8320 S13: -0.1304 REMARK 3 S21: -0.3462 S22: 0.1754 S23: -0.6059 REMARK 3 S31: -0.3645 S32: 0.4995 S33: 0.0602 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 185 A 233 REMARK 3 ORIGIN FOR THE GROUP (A): 38.4039 -3.5873 -8.1140 REMARK 3 T TENSOR REMARK 3 T11: 0.0220 T22: 0.0852 REMARK 3 T33: 0.1810 T12: -0.0069 REMARK 3 T13: -0.0418 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 1.3490 L22: 1.8987 REMARK 3 L33: 1.2298 L12: -0.8514 REMARK 3 L13: 0.5681 L23: -0.6849 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: -0.1561 S13: 0.1560 REMARK 3 S21: 0.0679 S22: 0.0101 S23: -0.5124 REMARK 3 S31: 0.0232 S32: 0.1214 S33: 0.0496 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 234 A 259 REMARK 3 ORIGIN FOR THE GROUP (A): 20.8581 -22.3805 -24.9680 REMARK 3 T TENSOR REMARK 3 T11: 0.0904 T22: 0.0683 REMARK 3 T33: 0.0693 T12: -0.0164 REMARK 3 T13: 0.0521 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 6.0000 L22: 2.0828 REMARK 3 L33: 3.1986 L12: -1.1586 REMARK 3 L13: 1.9537 L23: -0.2244 REMARK 3 S TENSOR REMARK 3 S11: 0.1144 S12: 0.4629 S13: -0.1203 REMARK 3 S21: -0.0515 S22: -0.1359 S23: -0.1244 REMARK 3 S31: 0.0708 S32: 0.2128 S33: 0.0215 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2X63 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1290042899. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21401 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1RO8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES5, PH 7.5, 8% (W/V) REMARK 280 POLYETHYLENE GLYCOL 6000, 5% (V/V) 2-METHYL-2,4-PENTANEDIOL. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 58.09500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.09500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 23.47550 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 58.09500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.09500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 23.47550 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 58.09500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 58.09500 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 23.47550 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 58.09500 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 58.09500 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 23.47550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ASN 51 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ILE 53 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 222 TO GLY REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C ASN A 259 O HOH A 2173 1.88 REMARK 500 OE1 GLU A 72 O HOH A 2054 1.98 REMARK 500 CB ILE A 258 O HOH A 2172 2.00 REMARK 500 NZ LYS A 46 O HOH A 2037 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 31 -123.32 55.79 REMARK 500 GLN A 32 32.26 -87.19 REMARK 500 SER A 161 70.97 29.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2018 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A2024 DISTANCE = 6.27 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1260 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C A 1261 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RO8 RELATED DB: PDB REMARK 900 STRUCTURAL ANALYSIS OF THE SIALYLTRANSFERASE CSTII REMARK 900 FROMCAMPYLOBACTER JEJUNI IN COMPLEX WITH A SUBSTRATE ANALOGUE, REMARK 900 CYTIDINE-5'-MONOPHOSPHATE REMARK 900 RELATED ID: 2X62 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE SIALYLTRANSFERASE CST-II Y81F IN COMPLEX REMARK 900 WITH CMP REMARK 900 RELATED ID: 1RO7 RELATED DB: PDB REMARK 900 STRUCTURAL ANALYSIS OF THE SIALYLTRANSFERASE CSTII REMARK 900 FROMCAMPYLOBACTER JEJUNI IN COMPLEX WITH A SUBSTRATE ANALOGUE,CMP- REMARK 900 3FNEUAC. REMARK 900 RELATED ID: 2X61 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE SIALYLTRANSFERASE CST-II IN COMPLEX WITH REMARK 900 TRISACCHARIDE ACCEPTOR AND CMP REMARK 999 REMARK 999 SEQUENCE REMARK 999 32 RESIDUES DELETED AT THE C-TERMINUS DBREF 2X63 A 2 259 UNP Q9LAK3 Q9LAK3_CAMJE 2 259 SEQADV 2X63 ALA A 51 UNP Q9LAK3 ASN 51 ENGINEERED MUTATION SEQADV 2X63 SER A 53 UNP Q9LAK3 ILE 53 ENGINEERED MUTATION SEQADV 2X63 GLY A 222 UNP Q9LAK3 GLU 222 ENGINEERED MUTATION SEQRES 1 A 258 LYS LYS VAL ILE ILE ALA GLY ASN GLY PRO SER LEU LYS SEQRES 2 A 258 GLU ILE ASP TYR SER ARG LEU PRO ASN ASP PHE ASP VAL SEQRES 3 A 258 PHE ARG CYS ASN GLN PHE TYR PHE GLU ASP LYS TYR TYR SEQRES 4 A 258 LEU GLY LYS LYS CYS LYS ALA VAL PHE TYR ALA PRO SER SEQRES 5 A 258 LEU PHE PHE GLU GLN TYR TYR THR LEU LYS HIS LEU ILE SEQRES 6 A 258 GLN ASN GLN GLU TYR GLU THR GLU LEU ILE MET CYS SER SEQRES 7 A 258 ASN TYR ASN GLN ALA HIS LEU GLU ASN GLU ASN PHE VAL SEQRES 8 A 258 LYS THR PHE TYR ASP TYR PHE PRO ASP ALA HIS LEU GLY SEQRES 9 A 258 TYR ASP PHE PHE LYS GLN LEU LYS ASP PHE ASN ALA TYR SEQRES 10 A 258 PHE LYS PHE HIS GLU ILE TYR PHE ASN GLN ARG ILE THR SEQRES 11 A 258 SER GLY VAL TYR MET CYS ALA VAL ALA ILE ALA LEU GLY SEQRES 12 A 258 TYR LYS GLU ILE TYR LEU SER GLY ILE ASP PHE TYR GLN SEQRES 13 A 258 ASN GLY SER SER TYR ALA PHE ASP THR LYS GLN LYS ASN SEQRES 14 A 258 LEU LEU LYS LEU ALA PRO ASN PHE LYS ASN ASP ASN SER SEQRES 15 A 258 HIS TYR ILE GLY HIS SER LYS ASN THR ASP ILE LYS ALA SEQRES 16 A 258 LEU GLU PHE LEU GLU LYS THR TYR LYS ILE LYS LEU TYR SEQRES 17 A 258 CYS LEU CYS PRO ASN SER LEU LEU ALA ASN PHE ILE GLY SEQRES 18 A 258 LEU ALA PRO ASN LEU ASN SER ASN PHE ILE ILE GLN GLU SEQRES 19 A 258 LYS ASN ASN TYR THR LYS ASP ILE LEU ILE PRO SER SER SEQRES 20 A 258 GLU ALA TYR GLY LYS PHE SER LYS ASN ILE ASN HET EDO A1260 4 HET C A1261 21 HETNAM EDO 1,2-ETHANEDIOL HETNAM C CYTIDINE-5'-MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO C2 H6 O2 FORMUL 3 C C9 H14 N3 O8 P FORMUL 4 HOH *176(H2 O) HELIX 1 1 GLY A 10 GLU A 15 5 6 HELIX 2 2 ASP A 17 LEU A 21 5 5 HELIX 3 3 GLN A 32 GLU A 36 5 5 HELIX 4 4 LEU A 54 ASN A 68 1 15 HELIX 5 5 ASN A 88 THR A 94 1 7 HELIX 6 6 THR A 94 PHE A 99 1 6 HELIX 7 7 GLY A 105 LYS A 110 1 6 HELIX 8 8 LEU A 112 ASN A 127 1 16 HELIX 9 9 THR A 131 LEU A 143 1 13 HELIX 10 10 GLN A 168 ALA A 175 1 8 HELIX 11 11 PRO A 176 ASN A 180 5 5 HELIX 12 12 SER A 189 LYS A 205 1 17 HELIX 13 13 SER A 215 PHE A 220 5 6 HELIX 14 14 SER A 247 SER A 255 1 9 HELIX 15 15 LYS A 256 ILE A 258 5 3 SHEET 1 AA 7 HIS A 103 LEU A 104 0 SHEET 2 AA 7 GLU A 72 CYS A 78 1 O ILE A 76 N HIS A 103 SHEET 3 AA 7 LYS A 44 TYR A 50 1 O CYS A 45 N GLU A 74 SHEET 4 AA 7 PHE A 25 CYS A 30 1 O VAL A 27 N LYS A 46 SHEET 5 AA 7 LYS A 3 ALA A 7 1 O LYS A 3 N ASP A 26 SHEET 6 AA 7 GLU A 147 SER A 151 1 O GLU A 147 N VAL A 4 SHEET 7 AA 7 LYS A 207 CYS A 210 1 O LYS A 207 N ILE A 148 SITE 1 AC1 7 SER A 12 GLU A 15 CYS A 212 PRO A 213 SITE 2 AC1 7 ASN A 214 SER A 215 HOH A2122 SITE 1 AC2 23 GLY A 8 ASN A 9 GLY A 10 PRO A 11 SITE 2 AC2 23 CYS A 30 ASN A 31 THR A 131 SER A 132 SITE 3 AC2 23 GLY A 133 GLY A 152 ILE A 153 ASP A 154 SITE 4 AC2 23 PHE A 155 TYR A 156 SER A 160 SER A 161 SITE 5 AC2 23 TYR A 162 HOH A2004 HOH A2125 HOH A2140 SITE 6 AC2 23 HOH A2174 HOH A2175 HOH A2176 CRYST1 116.190 116.190 46.951 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008607 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008607 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021299 0.00000