data_2X6U # _entry.id 2X6U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2X6U PDBE EBI-43002 WWPDB D_1290043002 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2X6V _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF HUMAN TBX5 IN THE DNA -BOUND AND DNA-FREE FORM' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2X6U _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-02-22 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stirnimann, C.U.' 1 'Mueller, C.W.' 2 # _citation.id primary _citation.title 'Structural Basis of Tbx5-DNA Recognition: The T-Box Domain in its DNA-Bound and -Unbound Form.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 400 _citation.page_first 71 _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20450920 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2010.04.052 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Stirnimann, C.U.' 1 primary 'Ptchelkine, D.' 2 primary 'Grimm, C.' 3 primary 'Muller, C.W.' 4 # _cell.entry_id 2X6U _cell.length_a 36.710 _cell.length_b 69.850 _cell.length_c 80.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X6U _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'T-BOX TRANSCRIPTION FACTOR TBX5' 23406.096 1 ? ? 'T-BOX DOMAIN, RESIDUES 51-251' ? 2 non-polymer syn '2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL' 354.436 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 4 water nat water 18.015 150 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HUMAN TBX5, T-BOX PROTEIN 5, TBX5' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMEGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAE PAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPE TAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDMELHRMSRMQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMEGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAE PAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPE TAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDMELHRMSRMQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLU n 1 5 GLY n 1 6 ILE n 1 7 LYS n 1 8 VAL n 1 9 PHE n 1 10 LEU n 1 11 HIS n 1 12 GLU n 1 13 ARG n 1 14 GLU n 1 15 LEU n 1 16 TRP n 1 17 LEU n 1 18 LYS n 1 19 PHE n 1 20 HIS n 1 21 GLU n 1 22 VAL n 1 23 GLY n 1 24 THR n 1 25 GLU n 1 26 MET n 1 27 ILE n 1 28 ILE n 1 29 THR n 1 30 LYS n 1 31 ALA n 1 32 GLY n 1 33 ARG n 1 34 ARG n 1 35 MET n 1 36 PHE n 1 37 PRO n 1 38 SER n 1 39 TYR n 1 40 LYS n 1 41 VAL n 1 42 LYS n 1 43 VAL n 1 44 THR n 1 45 GLY n 1 46 LEU n 1 47 ASN n 1 48 PRO n 1 49 LYS n 1 50 THR n 1 51 LYS n 1 52 TYR n 1 53 ILE n 1 54 LEU n 1 55 LEU n 1 56 MET n 1 57 ASP n 1 58 ILE n 1 59 VAL n 1 60 PRO n 1 61 ALA n 1 62 ASP n 1 63 ASP n 1 64 HIS n 1 65 ARG n 1 66 TYR n 1 67 LYS n 1 68 PHE n 1 69 ALA n 1 70 ASP n 1 71 ASN n 1 72 LYS n 1 73 TRP n 1 74 SER n 1 75 VAL n 1 76 THR n 1 77 GLY n 1 78 LYS n 1 79 ALA n 1 80 GLU n 1 81 PRO n 1 82 ALA n 1 83 MET n 1 84 PRO n 1 85 GLY n 1 86 ARG n 1 87 LEU n 1 88 TYR n 1 89 VAL n 1 90 HIS n 1 91 PRO n 1 92 ASP n 1 93 SER n 1 94 PRO n 1 95 ALA n 1 96 THR n 1 97 GLY n 1 98 ALA n 1 99 HIS n 1 100 TRP n 1 101 MET n 1 102 ARG n 1 103 GLN n 1 104 LEU n 1 105 VAL n 1 106 SER n 1 107 PHE n 1 108 GLN n 1 109 LYS n 1 110 LEU n 1 111 LYS n 1 112 LEU n 1 113 THR n 1 114 ASN n 1 115 ASN n 1 116 HIS n 1 117 LEU n 1 118 ASP n 1 119 PRO n 1 120 PHE n 1 121 GLY n 1 122 HIS n 1 123 ILE n 1 124 ILE n 1 125 LEU n 1 126 ASN n 1 127 SER n 1 128 MET n 1 129 HIS n 1 130 LYS n 1 131 TYR n 1 132 GLN n 1 133 PRO n 1 134 ARG n 1 135 LEU n 1 136 HIS n 1 137 ILE n 1 138 VAL n 1 139 LYS n 1 140 ALA n 1 141 ASP n 1 142 GLU n 1 143 ASN n 1 144 ASN n 1 145 GLY n 1 146 PHE n 1 147 GLY n 1 148 SER n 1 149 LYS n 1 150 ASN n 1 151 THR n 1 152 ALA n 1 153 PHE n 1 154 CYS n 1 155 THR n 1 156 HIS n 1 157 VAL n 1 158 PHE n 1 159 PRO n 1 160 GLU n 1 161 THR n 1 162 ALA n 1 163 PHE n 1 164 ILE n 1 165 ALA n 1 166 VAL n 1 167 THR n 1 168 SER n 1 169 TYR n 1 170 GLN n 1 171 ASN n 1 172 HIS n 1 173 LYS n 1 174 ILE n 1 175 THR n 1 176 GLN n 1 177 LEU n 1 178 LYS n 1 179 ILE n 1 180 GLU n 1 181 ASN n 1 182 ASN n 1 183 PRO n 1 184 PHE n 1 185 ALA n 1 186 LYS n 1 187 GLY n 1 188 PHE n 1 189 ARG n 1 190 GLY n 1 191 SER n 1 192 ASP n 1 193 ASP n 1 194 MET n 1 195 GLU n 1 196 LEU n 1 197 HIS n 1 198 ARG n 1 199 MET n 1 200 SER n 1 201 ARG n 1 202 MET n 1 203 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) RIPL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-M11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2X6U 1 ? ? 2X6U ? 2 UNP TBX5_HUMAN 1 ? ? Q99593 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2X6U A 1 ? 2 ? 2X6U 49 ? 50 ? 49 50 2 2 2X6U A 3 ? 203 ? Q99593 51 ? 251 ? 51 251 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PE4 non-polymer . '2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL' 'POLYETHYLENE GLYCOL PEG4000' 'C16 H34 O8' 354.436 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2X6U _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_percent_sol 44.21 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 6.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2009-04-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.873 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength 0.873 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2X6U _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 1.90 _reflns.number_obs 16939 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.10 _reflns.B_iso_Wilson_estimate 25.05 _reflns.pdbx_redundancy 4.5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.47 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.40 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2X6U _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16922 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.99 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.662 _refine.ls_d_res_high 1.900 _refine.ls_percent_reflns_obs 99.89 _refine.ls_R_factor_obs 0.2131 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2105 _refine.ls_R_factor_R_free 0.2643 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 847 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 31.5 _refine.aniso_B[1][1] 5.0410 _refine.aniso_B[2][2] -4.8972 _refine.aniso_B[3][3] -9.5941 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.350 _refine.solvent_model_param_bsol 54.110 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'WWPDB DEPOSITION 43002' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.24 _refine.pdbx_overall_phase_error 24.70 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1433 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 150 _refine_hist.number_atoms_total 1603 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 19.662 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 1545 'X-RAY DIFFRACTION' ? f_angle_d 0.708 ? ? 2095 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.520 ? ? 586 'X-RAY DIFFRACTION' ? f_chiral_restr 0.049 ? ? 228 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 263 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.9000 2.0189 2650 0.2488 100.00 0.2877 . . 140 . . 'X-RAY DIFFRACTION' . 2.0189 2.1746 2623 0.2227 100.00 0.2794 . . 138 . . 'X-RAY DIFFRACTION' . 2.1746 2.3931 2645 0.2119 100.00 0.2916 . . 139 . . 'X-RAY DIFFRACTION' . 2.3931 2.7386 2647 0.2288 100.00 0.2830 . . 140 . . 'X-RAY DIFFRACTION' . 2.7386 3.4474 2696 0.2052 100.00 0.2567 . . 141 . . 'X-RAY DIFFRACTION' . 3.4474 19.6631 2814 0.1895 100.00 0.2265 . . 149 . . # _struct.entry_id 2X6U _struct.title 'Crystal structure of human TBX5 in the DNA-free form' _struct.pdbx_descriptor 'T-BOX TRANSCRIPTION FACTOR TBX5' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2X6U _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;DEVELOPMENTAL PROTEIN, DNA-BINDING, HOLT-ORAM-SYNDROME, IG-FOLD, NUCLEAR PROTEIN, REPRESSOR, TBX3, TRANSCRIPTION, TRANSCRIPTION REGULATION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 12 ? GLY A 23 ? GLU A 60 GLY A 71 1 ? 12 HELX_P HELX_P2 2 GLY A 97 ? GLN A 103 ? GLY A 145 GLN A 151 1 ? 7 HELX_P HELX_P3 3 PHE A 158 ? ALA A 162 ? PHE A 206 ALA A 210 5 ? 5 HELX_P HELX_P4 4 ASN A 171 ? ASN A 182 ? ASN A 219 ASN A 230 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id metalc1 _struct_conn.conn_type_id metalc _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_comp_id MG _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id MG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id G _struct_conn.ptnr2_label_comp_id HOH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id O _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id MG _struct_conn.ptnr1_auth_seq_id 1233 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HOH _struct_conn.ptnr2_auth_seq_id 2059 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.966 _struct_conn.pdbx_value_order ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 36 A . ? PHE 84 A PRO 37 A ? PRO 85 A 1 0.56 2 SER 93 A . ? SER 141 A PRO 94 A ? PRO 142 A 1 -6.05 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 3 ? AB ? 4 ? AC ? 5 ? AD ? 2 ? AE ? 5 ? AF ? 2 ? AG ? 5 ? AH ? 2 ? AI ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AC 1 2 ? parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel AC 4 5 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? parallel AE 2 3 ? anti-parallel AE 3 4 ? anti-parallel AE 4 5 ? anti-parallel AF 1 2 ? anti-parallel AG 1 2 ? parallel AG 2 3 ? anti-parallel AG 3 4 ? anti-parallel AG 4 5 ? anti-parallel AH 1 2 ? anti-parallel AI 1 2 ? anti-parallel AI 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LYS A 7 ? LEU A 10 ? LYS A 55 LEU A 58 AA 2 LYS A 40 ? THR A 44 ? LYS A 88 THR A 92 AA 3 VAL A 105 ? SER A 106 ? VAL A 153 SER A 154 AB 1 GLU A 25 ? ILE A 27 ? GLU A 73 ILE A 75 AB 2 PHE A 163 ? VAL A 166 ? PHE A 211 VAL A 214 AB 3 HIS A 129 ? LYS A 139 ? HIS A 177 LYS A 187 AB 4 PHE A 153 ? HIS A 156 ? PHE A 201 HIS A 204 AC 1 GLU A 25 ? ILE A 27 ? GLU A 73 ILE A 75 AC 2 PHE A 163 ? VAL A 166 ? PHE A 211 VAL A 214 AC 3 HIS A 129 ? LYS A 139 ? HIS A 177 LYS A 187 AC 4 LYS A 51 ? ALA A 69 ? LYS A 99 ALA A 117 AC 5 LYS A 72 ? LYS A 78 ? LYS A 120 LYS A 126 AD 1 TYR A 88 ? VAL A 89 ? TYR A 136 VAL A 137 AD 2 LYS A 51 ? ALA A 69 ? LYS A 99 ALA A 117 AE 1 GLU A 25 ? ILE A 27 ? GLU A 73 ILE A 75 AE 2 PHE A 163 ? VAL A 166 ? PHE A 211 VAL A 214 AE 3 HIS A 129 ? LYS A 139 ? HIS A 177 LYS A 187 AE 4 LYS A 51 ? ALA A 69 ? LYS A 99 ALA A 117 AE 5 TYR A 88 ? VAL A 89 ? TYR A 136 VAL A 137 AF 1 ALA A 95 ? THR A 96 ? ALA A 143 THR A 144 AF 2 LYS A 51 ? ALA A 69 ? LYS A 99 ALA A 117 AG 1 GLU A 25 ? ILE A 27 ? GLU A 73 ILE A 75 AG 2 PHE A 163 ? VAL A 166 ? PHE A 211 VAL A 214 AG 3 HIS A 129 ? LYS A 139 ? HIS A 177 LYS A 187 AG 4 LYS A 51 ? ALA A 69 ? LYS A 99 ALA A 117 AG 5 ALA A 95 ? THR A 96 ? ALA A 143 THR A 144 AH 1 PHE A 153 ? HIS A 156 ? PHE A 201 HIS A 204 AH 2 HIS A 129 ? LYS A 139 ? HIS A 177 LYS A 187 AI 1 ARG A 33 ? ARG A 34 ? ARG A 81 ARG A 82 AI 2 LYS A 111 ? THR A 113 ? LYS A 159 THR A 161 AI 3 ILE A 123 ? ILE A 124 ? ILE A 171 ILE A 172 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 9 ? N PHE A 57 O LYS A 42 ? O LYS A 90 AA 2 3 N VAL A 41 ? N VAL A 89 O VAL A 105 ? O VAL A 153 AB 1 2 N MET A 26 ? N MET A 74 O ILE A 164 ? O ILE A 212 AB 2 3 N ALA A 165 ? N ALA A 213 O HIS A 129 ? O HIS A 177 AB 3 4 N ILE A 137 ? N ILE A 185 O CYS A 154 ? O CYS A 202 AC 1 2 N MET A 26 ? N MET A 74 O ILE A 164 ? O ILE A 212 AC 2 3 N ALA A 165 ? N ALA A 213 O HIS A 129 ? O HIS A 177 AC 3 4 N VAL A 138 ? N VAL A 186 O ILE A 53 ? O ILE A 101 AC 4 5 N ALA A 69 ? N ALA A 117 O LYS A 72 ? O LYS A 120 AD 1 2 N TYR A 88 ? N TYR A 136 O MET A 56 ? O MET A 104 AE 1 2 N MET A 26 ? N MET A 74 O ILE A 164 ? O ILE A 212 AE 2 3 N ALA A 165 ? N ALA A 213 O HIS A 129 ? O HIS A 177 AE 3 4 N VAL A 138 ? N VAL A 186 O ILE A 53 ? O ILE A 101 AE 4 5 N MET A 56 ? N MET A 104 O TYR A 88 ? O TYR A 136 AF 1 2 N ALA A 95 ? N ALA A 143 O TYR A 52 ? O TYR A 100 AG 1 2 N MET A 26 ? N MET A 74 O ILE A 164 ? O ILE A 212 AG 2 3 N ALA A 165 ? N ALA A 213 O HIS A 129 ? O HIS A 177 AG 3 4 N VAL A 138 ? N VAL A 186 O ILE A 53 ? O ILE A 101 AG 4 5 N TYR A 52 ? N TYR A 100 O ALA A 95 ? O ALA A 143 AH 1 2 N HIS A 156 ? N HIS A 204 O LEU A 135 ? O LEU A 183 AI 1 2 N ARG A 33 ? N ARG A 81 O LEU A 112 ? O LEU A 160 AI 2 3 N THR A 113 ? N THR A 161 O ILE A 123 ? O ILE A 171 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE PE4 A 1231' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE MG A 1232' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE MG A 1233' AC4 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE MG A 1234' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 THR A 155 ? THR A 203 . ? 1_555 ? 2 AC1 5 HIS A 156 ? HIS A 204 . ? 1_555 ? 3 AC1 5 VAL A 157 ? VAL A 205 . ? 1_555 ? 4 AC1 5 PHE A 158 ? PHE A 206 . ? 1_555 ? 5 AC1 5 HOH G . ? HOH A 2134 . ? 1_555 ? 6 AC2 3 LYS A 30 ? LYS A 78 . ? 1_555 ? 7 AC2 3 LYS A 78 ? LYS A 126 . ? 4_545 ? 8 AC2 3 ASN A 114 ? ASN A 162 . ? 1_555 ? 9 AC3 4 HIS A 64 ? HIS A 112 . ? 1_555 ? 10 AC3 4 GLY A 77 ? GLY A 125 . ? 1_555 ? 11 AC3 4 ASN A 114 ? ASN A 162 . ? 4_445 ? 12 AC3 4 HOH G . ? HOH A 2059 . ? 1_555 ? 13 AC4 2 ARG A 33 ? ARG A 81 . ? 1_555 ? 14 AC4 2 ARG A 34 ? ARG A 82 . ? 1_555 ? # _database_PDB_matrix.entry_id 2X6U _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2X6U _atom_sites.fract_transf_matrix[1][1] 0.027241 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014316 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012422 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 49 ? ? ? A . n A 1 2 ALA 2 50 ? ? ? A . n A 1 3 MET 3 51 ? ? ? A . n A 1 4 GLU 4 52 52 GLU GLU A . n A 1 5 GLY 5 53 53 GLY GLY A . n A 1 6 ILE 6 54 54 ILE ILE A . n A 1 7 LYS 7 55 55 LYS LYS A . n A 1 8 VAL 8 56 56 VAL VAL A . n A 1 9 PHE 9 57 57 PHE PHE A . n A 1 10 LEU 10 58 58 LEU LEU A . n A 1 11 HIS 11 59 59 HIS HIS A . n A 1 12 GLU 12 60 60 GLU GLU A . n A 1 13 ARG 13 61 61 ARG ARG A . n A 1 14 GLU 14 62 62 GLU GLU A . n A 1 15 LEU 15 63 63 LEU LEU A . n A 1 16 TRP 16 64 64 TRP TRP A . n A 1 17 LEU 17 65 65 LEU LEU A . n A 1 18 LYS 18 66 66 LYS LYS A . n A 1 19 PHE 19 67 67 PHE PHE A . n A 1 20 HIS 20 68 68 HIS HIS A . n A 1 21 GLU 21 69 69 GLU GLU A . n A 1 22 VAL 22 70 70 VAL VAL A . n A 1 23 GLY 23 71 71 GLY GLY A . n A 1 24 THR 24 72 72 THR THR A . n A 1 25 GLU 25 73 73 GLU GLU A . n A 1 26 MET 26 74 74 MET MET A . n A 1 27 ILE 27 75 75 ILE ILE A . n A 1 28 ILE 28 76 76 ILE ILE A . n A 1 29 THR 29 77 77 THR THR A . n A 1 30 LYS 30 78 78 LYS LYS A . n A 1 31 ALA 31 79 79 ALA ALA A . n A 1 32 GLY 32 80 80 GLY GLY A . n A 1 33 ARG 33 81 81 ARG ARG A . n A 1 34 ARG 34 82 82 ARG ARG A . n A 1 35 MET 35 83 83 MET MET A . n A 1 36 PHE 36 84 84 PHE PHE A . n A 1 37 PRO 37 85 85 PRO PRO A . n A 1 38 SER 38 86 86 SER SER A . n A 1 39 TYR 39 87 87 TYR TYR A . n A 1 40 LYS 40 88 88 LYS LYS A . n A 1 41 VAL 41 89 89 VAL VAL A . n A 1 42 LYS 42 90 90 LYS LYS A . n A 1 43 VAL 43 91 91 VAL VAL A . n A 1 44 THR 44 92 92 THR THR A . n A 1 45 GLY 45 93 93 GLY GLY A . n A 1 46 LEU 46 94 94 LEU LEU A . n A 1 47 ASN 47 95 95 ASN ASN A . n A 1 48 PRO 48 96 96 PRO PRO A . n A 1 49 LYS 49 97 97 LYS LYS A . n A 1 50 THR 50 98 98 THR THR A . n A 1 51 LYS 51 99 99 LYS LYS A . n A 1 52 TYR 52 100 100 TYR TYR A . n A 1 53 ILE 53 101 101 ILE ILE A . n A 1 54 LEU 54 102 102 LEU LEU A . n A 1 55 LEU 55 103 103 LEU LEU A . n A 1 56 MET 56 104 104 MET MET A . n A 1 57 ASP 57 105 105 ASP ASP A . n A 1 58 ILE 58 106 106 ILE ILE A . n A 1 59 VAL 59 107 107 VAL VAL A . n A 1 60 PRO 60 108 108 PRO PRO A . n A 1 61 ALA 61 109 109 ALA ALA A . n A 1 62 ASP 62 110 110 ASP ASP A . n A 1 63 ASP 63 111 111 ASP ASP A . n A 1 64 HIS 64 112 112 HIS HIS A . n A 1 65 ARG 65 113 113 ARG ARG A . n A 1 66 TYR 66 114 114 TYR TYR A . n A 1 67 LYS 67 115 115 LYS LYS A . n A 1 68 PHE 68 116 116 PHE PHE A . n A 1 69 ALA 69 117 117 ALA ALA A . n A 1 70 ASP 70 118 118 ASP ASP A . n A 1 71 ASN 71 119 119 ASN ASN A . n A 1 72 LYS 72 120 120 LYS LYS A . n A 1 73 TRP 73 121 121 TRP TRP A . n A 1 74 SER 74 122 122 SER SER A . n A 1 75 VAL 75 123 123 VAL VAL A . n A 1 76 THR 76 124 124 THR THR A . n A 1 77 GLY 77 125 125 GLY GLY A . n A 1 78 LYS 78 126 126 LYS LYS A . n A 1 79 ALA 79 127 127 ALA ALA A . n A 1 80 GLU 80 128 128 GLU GLU A . n A 1 81 PRO 81 129 129 PRO PRO A . n A 1 82 ALA 82 130 130 ALA ALA A . n A 1 83 MET 83 131 ? ? ? A . n A 1 84 PRO 84 132 ? ? ? A . n A 1 85 GLY 85 133 ? ? ? A . n A 1 86 ARG 86 134 134 ARG ARG A . n A 1 87 LEU 87 135 135 LEU LEU A . n A 1 88 TYR 88 136 136 TYR TYR A . n A 1 89 VAL 89 137 137 VAL VAL A . n A 1 90 HIS 90 138 138 HIS HIS A . n A 1 91 PRO 91 139 139 PRO PRO A . n A 1 92 ASP 92 140 140 ASP ASP A . n A 1 93 SER 93 141 141 SER SER A . n A 1 94 PRO 94 142 142 PRO PRO A . n A 1 95 ALA 95 143 143 ALA ALA A . n A 1 96 THR 96 144 144 THR THR A . n A 1 97 GLY 97 145 145 GLY GLY A . n A 1 98 ALA 98 146 146 ALA ALA A . n A 1 99 HIS 99 147 147 HIS HIS A . n A 1 100 TRP 100 148 148 TRP TRP A . n A 1 101 MET 101 149 149 MET MET A . n A 1 102 ARG 102 150 150 ARG ARG A . n A 1 103 GLN 103 151 151 GLN GLN A . n A 1 104 LEU 104 152 152 LEU LEU A . n A 1 105 VAL 105 153 153 VAL VAL A . n A 1 106 SER 106 154 154 SER SER A . n A 1 107 PHE 107 155 155 PHE PHE A . n A 1 108 GLN 108 156 156 GLN GLN A . n A 1 109 LYS 109 157 157 LYS LYS A . n A 1 110 LEU 110 158 158 LEU LEU A . n A 1 111 LYS 111 159 159 LYS LYS A . n A 1 112 LEU 112 160 160 LEU LEU A . n A 1 113 THR 113 161 161 THR THR A . n A 1 114 ASN 114 162 162 ASN ASN A . n A 1 115 ASN 115 163 163 ASN ASN A . n A 1 116 HIS 116 164 164 HIS HIS A . n A 1 117 LEU 117 165 165 LEU LEU A . n A 1 118 ASP 118 166 166 ASP ASP A . n A 1 119 PRO 119 167 167 PRO PRO A . n A 1 120 PHE 120 168 168 PHE PHE A . n A 1 121 GLY 121 169 169 GLY GLY A . n A 1 122 HIS 122 170 170 HIS HIS A . n A 1 123 ILE 123 171 171 ILE ILE A . n A 1 124 ILE 124 172 172 ILE ILE A . n A 1 125 LEU 125 173 173 LEU LEU A . n A 1 126 ASN 126 174 174 ASN ASN A . n A 1 127 SER 127 175 175 SER SER A . n A 1 128 MET 128 176 176 MET MET A . n A 1 129 HIS 129 177 177 HIS HIS A . n A 1 130 LYS 130 178 178 LYS LYS A . n A 1 131 TYR 131 179 179 TYR TYR A . n A 1 132 GLN 132 180 180 GLN GLN A . n A 1 133 PRO 133 181 181 PRO PRO A . n A 1 134 ARG 134 182 182 ARG ARG A . n A 1 135 LEU 135 183 183 LEU LEU A . n A 1 136 HIS 136 184 184 HIS HIS A . n A 1 137 ILE 137 185 185 ILE ILE A . n A 1 138 VAL 138 186 186 VAL VAL A . n A 1 139 LYS 139 187 187 LYS LYS A . n A 1 140 ALA 140 188 188 ALA ALA A . n A 1 141 ASP 141 189 189 ASP ASP A . n A 1 142 GLU 142 190 190 GLU GLU A . n A 1 143 ASN 143 191 191 ASN ASN A . n A 1 144 ASN 144 192 192 ASN ASN A . n A 1 145 GLY 145 193 193 GLY GLY A . n A 1 146 PHE 146 194 194 PHE PHE A . n A 1 147 GLY 147 195 195 GLY GLY A . n A 1 148 SER 148 196 196 SER SER A . n A 1 149 LYS 149 197 197 LYS LYS A . n A 1 150 ASN 150 198 198 ASN ASN A . n A 1 151 THR 151 199 199 THR THR A . n A 1 152 ALA 152 200 200 ALA ALA A . n A 1 153 PHE 153 201 201 PHE PHE A . n A 1 154 CYS 154 202 202 CYS CYS A . n A 1 155 THR 155 203 203 THR THR A . n A 1 156 HIS 156 204 204 HIS HIS A . n A 1 157 VAL 157 205 205 VAL VAL A . n A 1 158 PHE 158 206 206 PHE PHE A . n A 1 159 PRO 159 207 207 PRO PRO A . n A 1 160 GLU 160 208 208 GLU GLU A . n A 1 161 THR 161 209 209 THR THR A . n A 1 162 ALA 162 210 210 ALA ALA A . n A 1 163 PHE 163 211 211 PHE PHE A . n A 1 164 ILE 164 212 212 ILE ILE A . n A 1 165 ALA 165 213 213 ALA ALA A . n A 1 166 VAL 166 214 214 VAL VAL A . n A 1 167 THR 167 215 215 THR THR A . n A 1 168 SER 168 216 216 SER SER A . n A 1 169 TYR 169 217 217 TYR TYR A . n A 1 170 GLN 170 218 218 GLN GLN A . n A 1 171 ASN 171 219 219 ASN ASN A . n A 1 172 HIS 172 220 220 HIS HIS A . n A 1 173 LYS 173 221 221 LYS LYS A . n A 1 174 ILE 174 222 222 ILE ILE A . n A 1 175 THR 175 223 223 THR THR A . n A 1 176 GLN 176 224 224 GLN GLN A . n A 1 177 LEU 177 225 225 LEU LEU A . n A 1 178 LYS 178 226 226 LYS LYS A . n A 1 179 ILE 179 227 227 ILE ILE A . n A 1 180 GLU 180 228 228 GLU GLU A . n A 1 181 ASN 181 229 229 ASN ASN A . n A 1 182 ASN 182 230 230 ASN ASN A . n A 1 183 PRO 183 231 ? ? ? A . n A 1 184 PHE 184 232 ? ? ? A . n A 1 185 ALA 185 233 ? ? ? A . n A 1 186 LYS 186 234 ? ? ? A . n A 1 187 GLY 187 235 ? ? ? A . n A 1 188 PHE 188 236 ? ? ? A . n A 1 189 ARG 189 237 ? ? ? A . n A 1 190 GLY 190 238 ? ? ? A . n A 1 191 SER 191 239 ? ? ? A . n A 1 192 ASP 192 240 ? ? ? A . n A 1 193 ASP 193 241 ? ? ? A . n A 1 194 MET 194 242 ? ? ? A . n A 1 195 GLU 195 243 ? ? ? A . n A 1 196 LEU 196 244 ? ? ? A . n A 1 197 HIS 197 245 ? ? ? A . n A 1 198 ARG 198 246 ? ? ? A . n A 1 199 MET 199 247 ? ? ? A . n A 1 200 SER 200 248 ? ? ? A . n A 1 201 ARG 201 249 ? ? ? A . n A 1 202 MET 202 250 ? ? ? A . n A 1 203 GLN 203 251 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PE4 1 1231 1231 PE4 PE4 A . C 3 MG 1 1232 1232 MG MG A . D 3 MG 1 1233 1233 MG MG A . E 3 MG 1 1234 1234 MG MG A . F 3 MG 1 1235 1235 MG MG A . G 4 HOH 1 2001 2001 HOH HOH A . G 4 HOH 2 2002 2002 HOH HOH A . G 4 HOH 3 2003 2003 HOH HOH A . G 4 HOH 4 2004 2004 HOH HOH A . G 4 HOH 5 2005 2005 HOH HOH A . G 4 HOH 6 2006 2006 HOH HOH A . G 4 HOH 7 2007 2007 HOH HOH A . G 4 HOH 8 2008 2008 HOH HOH A . G 4 HOH 9 2009 2009 HOH HOH A . G 4 HOH 10 2010 2010 HOH HOH A . G 4 HOH 11 2011 2011 HOH HOH A . G 4 HOH 12 2012 2012 HOH HOH A . G 4 HOH 13 2013 2013 HOH HOH A . G 4 HOH 14 2014 2014 HOH HOH A . G 4 HOH 15 2015 2015 HOH HOH A . G 4 HOH 16 2016 2016 HOH HOH A . G 4 HOH 17 2017 2017 HOH HOH A . G 4 HOH 18 2018 2018 HOH HOH A . G 4 HOH 19 2019 2019 HOH HOH A . G 4 HOH 20 2020 2020 HOH HOH A . G 4 HOH 21 2021 2021 HOH HOH A . G 4 HOH 22 2022 2022 HOH HOH A . G 4 HOH 23 2023 2023 HOH HOH A . G 4 HOH 24 2024 2024 HOH HOH A . G 4 HOH 25 2025 2025 HOH HOH A . G 4 HOH 26 2026 2026 HOH HOH A . G 4 HOH 27 2027 2027 HOH HOH A . G 4 HOH 28 2028 2028 HOH HOH A . G 4 HOH 29 2029 2029 HOH HOH A . G 4 HOH 30 2030 2030 HOH HOH A . G 4 HOH 31 2031 2031 HOH HOH A . G 4 HOH 32 2032 2032 HOH HOH A . G 4 HOH 33 2033 2033 HOH HOH A . G 4 HOH 34 2034 2034 HOH HOH A . G 4 HOH 35 2035 2035 HOH HOH A . G 4 HOH 36 2036 2036 HOH HOH A . G 4 HOH 37 2037 2037 HOH HOH A . G 4 HOH 38 2038 2038 HOH HOH A . G 4 HOH 39 2039 2039 HOH HOH A . G 4 HOH 40 2040 2040 HOH HOH A . G 4 HOH 41 2041 2041 HOH HOH A . G 4 HOH 42 2042 2042 HOH HOH A . G 4 HOH 43 2043 2043 HOH HOH A . G 4 HOH 44 2044 2044 HOH HOH A . G 4 HOH 45 2045 2045 HOH HOH A . G 4 HOH 46 2046 2046 HOH HOH A . G 4 HOH 47 2047 2047 HOH HOH A . G 4 HOH 48 2048 2048 HOH HOH A . G 4 HOH 49 2049 2049 HOH HOH A . G 4 HOH 50 2050 2050 HOH HOH A . G 4 HOH 51 2051 2051 HOH HOH A . G 4 HOH 52 2052 2052 HOH HOH A . G 4 HOH 53 2053 2053 HOH HOH A . G 4 HOH 54 2054 2054 HOH HOH A . G 4 HOH 55 2055 2055 HOH HOH A . G 4 HOH 56 2056 2056 HOH HOH A . G 4 HOH 57 2057 2057 HOH HOH A . G 4 HOH 58 2058 2058 HOH HOH A . G 4 HOH 59 2059 2059 HOH HOH A . G 4 HOH 60 2060 2060 HOH HOH A . G 4 HOH 61 2061 2061 HOH HOH A . G 4 HOH 62 2062 2062 HOH HOH A . G 4 HOH 63 2063 2063 HOH HOH A . G 4 HOH 64 2064 2064 HOH HOH A . G 4 HOH 65 2065 2065 HOH HOH A . G 4 HOH 66 2066 2066 HOH HOH A . G 4 HOH 67 2067 2067 HOH HOH A . G 4 HOH 68 2068 2068 HOH HOH A . G 4 HOH 69 2069 2069 HOH HOH A . G 4 HOH 70 2070 2070 HOH HOH A . G 4 HOH 71 2071 2071 HOH HOH A . G 4 HOH 72 2072 2072 HOH HOH A . G 4 HOH 73 2073 2073 HOH HOH A . G 4 HOH 74 2074 2074 HOH HOH A . G 4 HOH 75 2075 2075 HOH HOH A . G 4 HOH 76 2076 2076 HOH HOH A . G 4 HOH 77 2077 2077 HOH HOH A . G 4 HOH 78 2078 2078 HOH HOH A . G 4 HOH 79 2079 2079 HOH HOH A . G 4 HOH 80 2080 2080 HOH HOH A . G 4 HOH 81 2081 2081 HOH HOH A . G 4 HOH 82 2082 2082 HOH HOH A . G 4 HOH 83 2083 2083 HOH HOH A . G 4 HOH 84 2084 2084 HOH HOH A . G 4 HOH 85 2085 2085 HOH HOH A . G 4 HOH 86 2086 2086 HOH HOH A . G 4 HOH 87 2087 2087 HOH HOH A . G 4 HOH 88 2088 2088 HOH HOH A . G 4 HOH 89 2089 2089 HOH HOH A . G 4 HOH 90 2090 2090 HOH HOH A . G 4 HOH 91 2091 2091 HOH HOH A . G 4 HOH 92 2092 2092 HOH HOH A . G 4 HOH 93 2093 2093 HOH HOH A . G 4 HOH 94 2094 2094 HOH HOH A . G 4 HOH 95 2095 2095 HOH HOH A . G 4 HOH 96 2096 2096 HOH HOH A . G 4 HOH 97 2097 2097 HOH HOH A . G 4 HOH 98 2098 2098 HOH HOH A . G 4 HOH 99 2099 2099 HOH HOH A . G 4 HOH 100 2100 2100 HOH HOH A . G 4 HOH 101 2101 2101 HOH HOH A . G 4 HOH 102 2102 2102 HOH HOH A . G 4 HOH 103 2103 2103 HOH HOH A . G 4 HOH 104 2104 2104 HOH HOH A . G 4 HOH 105 2105 2105 HOH HOH A . G 4 HOH 106 2106 2106 HOH HOH A . G 4 HOH 107 2107 2107 HOH HOH A . G 4 HOH 108 2108 2108 HOH HOH A . G 4 HOH 109 2109 2109 HOH HOH A . G 4 HOH 110 2110 2110 HOH HOH A . G 4 HOH 111 2111 2111 HOH HOH A . G 4 HOH 112 2112 2112 HOH HOH A . G 4 HOH 113 2113 2113 HOH HOH A . G 4 HOH 114 2114 2114 HOH HOH A . G 4 HOH 115 2115 2115 HOH HOH A . G 4 HOH 116 2116 2116 HOH HOH A . G 4 HOH 117 2117 2117 HOH HOH A . G 4 HOH 118 2118 2118 HOH HOH A . G 4 HOH 119 2119 2119 HOH HOH A . G 4 HOH 120 2120 2120 HOH HOH A . G 4 HOH 121 2121 2121 HOH HOH A . G 4 HOH 122 2122 2122 HOH HOH A . G 4 HOH 123 2123 2123 HOH HOH A . G 4 HOH 124 2124 2124 HOH HOH A . G 4 HOH 125 2125 2125 HOH HOH A . G 4 HOH 126 2126 2126 HOH HOH A . G 4 HOH 127 2127 2127 HOH HOH A . G 4 HOH 128 2128 2128 HOH HOH A . G 4 HOH 129 2129 2129 HOH HOH A . G 4 HOH 130 2130 2130 HOH HOH A . G 4 HOH 131 2131 2131 HOH HOH A . G 4 HOH 132 2132 2132 HOH HOH A . G 4 HOH 133 2133 2133 HOH HOH A . G 4 HOH 134 2134 2134 HOH HOH A . G 4 HOH 135 2135 2135 HOH HOH A . G 4 HOH 136 2136 2136 HOH HOH A . G 4 HOH 137 2137 2137 HOH HOH A . G 4 HOH 138 2138 2138 HOH HOH A . G 4 HOH 139 2139 2139 HOH HOH A . G 4 HOH 140 2140 2140 HOH HOH A . G 4 HOH 141 2141 2141 HOH HOH A . G 4 HOH 142 2142 2142 HOH HOH A . G 4 HOH 143 2143 2143 HOH HOH A . G 4 HOH 144 2144 2144 HOH HOH A . G 4 HOH 145 2145 2145 HOH HOH A . G 4 HOH 146 2146 2146 HOH HOH A . G 4 HOH 147 2147 2147 HOH HOH A . G 4 HOH 148 2148 2148 HOH HOH A . G 4 HOH 149 2149 2149 HOH HOH A . G 4 HOH 150 2150 2150 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-04-28 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 52 ? CG ? A GLU 4 CG 2 1 Y 0 A GLU 52 ? CD ? A GLU 4 CD 3 1 Y 0 A GLU 52 ? OE1 ? A GLU 4 OE1 4 1 Y 0 A GLU 52 ? OE2 ? A GLU 4 OE2 5 1 Y 0 A GLU 62 ? CG ? A GLU 14 CG 6 1 Y 0 A GLU 62 ? CD ? A GLU 14 CD 7 1 Y 0 A GLU 62 ? OE1 ? A GLU 14 OE1 8 1 Y 0 A GLU 62 ? OE2 ? A GLU 14 OE2 9 1 Y 0 A GLU 69 ? CG ? A GLU 21 CG 10 1 Y 0 A GLU 69 ? CD ? A GLU 21 CD 11 1 Y 0 A GLU 69 ? OE1 ? A GLU 21 OE1 12 1 Y 0 A GLU 69 ? OE2 ? A GLU 21 OE2 13 1 Y 0 A ARG 150 ? CD ? A ARG 102 CD 14 1 Y 0 A ARG 150 ? NE ? A ARG 102 NE 15 1 Y 0 A ARG 150 ? CZ ? A ARG 102 CZ 16 1 Y 0 A ARG 150 ? NH1 ? A ARG 102 NH1 17 1 Y 0 A ARG 150 ? NH2 ? A ARG 102 NH2 18 1 Y 0 A LYS 157 ? CD ? A LYS 109 CD 19 1 Y 0 A LYS 157 ? CE ? A LYS 109 CE 20 1 Y 0 A LYS 157 ? NZ ? A LYS 109 NZ 21 1 Y 1 A GLU 190 ? CG ? A GLU 142 CG 22 1 Y 1 A GLU 190 ? CD ? A GLU 142 CD 23 1 Y 1 A GLU 190 ? OE1 ? A GLU 142 OE1 24 1 Y 1 A GLU 190 ? OE2 ? A GLU 142 OE2 25 1 N 1 A PE4 1231 ? C11 ? B PE4 1 C11 26 1 N 1 A PE4 1231 ? C12 ? B PE4 1 C12 27 1 N 1 A PE4 1231 ? O7 ? B PE4 1 O7 28 1 N 1 A PE4 1231 ? C13 ? B PE4 1 C13 29 1 N 1 A PE4 1231 ? C14 ? B PE4 1 C14 30 1 N 1 A PE4 1231 ? O8 ? B PE4 1 O8 31 1 N 1 A PE4 1231 ? C15 ? B PE4 1 C15 32 1 N 1 A PE4 1231 ? C16 ? B PE4 1 C16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 49 ? A GLY 1 2 1 Y 1 A ALA 50 ? A ALA 2 3 1 Y 1 A MET 51 ? A MET 3 4 1 Y 1 A MET 131 ? A MET 83 5 1 Y 1 A PRO 132 ? A PRO 84 6 1 Y 1 A GLY 133 ? A GLY 85 7 1 Y 1 A PRO 231 ? A PRO 183 8 1 Y 1 A PHE 232 ? A PHE 184 9 1 Y 1 A ALA 233 ? A ALA 185 10 1 Y 1 A LYS 234 ? A LYS 186 11 1 Y 1 A GLY 235 ? A GLY 187 12 1 Y 1 A PHE 236 ? A PHE 188 13 1 Y 1 A ARG 237 ? A ARG 189 14 1 Y 1 A GLY 238 ? A GLY 190 15 1 Y 1 A SER 239 ? A SER 191 16 1 Y 1 A ASP 240 ? A ASP 192 17 1 Y 1 A ASP 241 ? A ASP 193 18 1 Y 1 A MET 242 ? A MET 194 19 1 Y 1 A GLU 243 ? A GLU 195 20 1 Y 1 A LEU 244 ? A LEU 196 21 1 Y 1 A HIS 245 ? A HIS 197 22 1 Y 1 A ARG 246 ? A ARG 198 23 1 Y 1 A MET 247 ? A MET 199 24 1 Y 1 A SER 248 ? A SER 200 25 1 Y 1 A ARG 249 ? A ARG 201 26 1 Y 1 A MET 250 ? A MET 202 27 1 Y 1 A GLN 251 ? A GLN 203 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL' PE4 3 'MAGNESIUM ION' MG 4 water HOH #