HEADER TRANSFERASE 26-FEB-10 2X7G TITLE STRUCTURE OF HUMAN SERINE-ARGININE-RICH PROTEIN-SPECIFIC KINASE 2 TITLE 2 (SRPK2) BOUND TO PURVALANOL B COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN SRPK2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 62-267,519-699; COMPND 5 SYNONYM: SERINE/THREONINE-PROTEIN KINASE SRPK; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: SYNTHETIC CONSTRUCT ENGINEERED TO REMOVE INTERVENING COMPND 9 REGION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS SERINE/THREONINE-PROTEIN KINASE, MRNA SPLICING, PHOSPHOPROTEIN, MRNA KEYWDS 2 PROCESSING, DIFFERENTIATION, NUCLEOTIDE-BINDING, SPLICEASOME KEYWDS 3 ASSEMBLY, ATP COMPETITIVE INHIBITOR, KINASE, NUCLEUS, TRANSFERASE, KEYWDS 4 ATP-BINDING, SPLICE FACTOR TRAFFICKING EXPDTA X-RAY DIFFRACTION AUTHOR A.C.W.PIKE,P.SAVITSKY,O.FEDOROV,T.KROJER,E.UGOCHUKWU,F.VON DELFT, AUTHOR 2 O.GILEADI,A.EDWARDS,C.H.ARROWSMITH,J.WEIGELT,C.BOUNTRA,S.KNAPP REVDAT 4 20-DEC-23 2X7G 1 REMARK REVDAT 3 24-JAN-18 2X7G 1 JRNL REVDAT 2 13-JUL-11 2X7G 1 VERSN REVDAT 1 14-APR-10 2X7G 0 JRNL AUTH A.C.W.PIKE,P.SAVITSKY,O.FEDOROV,T.KROJER,E.UGOCHUKWU, JRNL AUTH 2 F.VON DELFT,O.GILEADI,A.EDWARDS,C.H.ARROWSMITH,J.WEIGELT, JRNL AUTH 3 C.BOUNTRA,S.KNAPP JRNL TITL STRUCTURE OF HUMAN SERINE-ARGININE-RICH PROTEIN- SPECIFIC JRNL TITL 2 KINASE 2 (SRPK2) BOUND TO PURVALANOL B JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 21171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1135 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1541 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.4180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2765 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 93 REMARK 3 SOLVENT ATOMS : 111 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 43.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : 0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.263 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.237 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.148 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.616 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.893 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2919 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1981 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3947 ; 1.368 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4801 ; 0.865 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 342 ; 5.792 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;34.143 ;23.359 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 488 ;14.205 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.742 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 420 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3159 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 602 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 548 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1872 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1373 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1439 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 107 ; 0.137 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.099 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 25 ; 0.262 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.178 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1716 ; 2.452 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 695 ; 0.627 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2768 ; 4.091 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1203 ; 7.692 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1179 ; 9.999 ;12.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 81 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): -19.3253 49.5508 -12.3388 REMARK 3 T TENSOR REMARK 3 T11: 0.3051 T22: 0.3095 REMARK 3 T33: 0.1311 T12: -0.2373 REMARK 3 T13: -0.0947 T23: 0.1035 REMARK 3 L TENSOR REMARK 3 L11: 6.9143 L22: 8.5930 REMARK 3 L33: 7.4686 L12: -1.4692 REMARK 3 L13: -2.5555 L23: 3.4685 REMARK 3 S TENSOR REMARK 3 S11: -0.2496 S12: 0.9352 S13: 0.1437 REMARK 3 S21: -0.9461 S22: 0.1099 S23: -0.0149 REMARK 3 S31: -0.4061 S32: 0.1034 S33: 0.1398 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 132 A 564 REMARK 3 RESIDUE RANGE : A 800 A 800 REMARK 3 ORIGIN FOR THE GROUP (A): -26.6212 35.7123 -4.2927 REMARK 3 T TENSOR REMARK 3 T11: 0.1010 T22: 0.1048 REMARK 3 T33: 0.0741 T12: -0.0435 REMARK 3 T13: 0.0099 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 2.2905 L22: 1.8449 REMARK 3 L33: 1.3431 L12: 1.0672 REMARK 3 L13: 0.8222 L23: 0.2207 REMARK 3 S TENSOR REMARK 3 S11: -0.1667 S12: 0.3557 S13: 0.0148 REMARK 3 S21: -0.2963 S22: 0.1874 S23: -0.2542 REMARK 3 S31: -0.0555 S32: 0.3298 S33: -0.0207 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 565 A 699 REMARK 3 ORIGIN FOR THE GROUP (A): -47.5178 27.1611 3.6401 REMARK 3 T TENSOR REMARK 3 T11: 0.0548 T22: 0.1112 REMARK 3 T33: 0.0586 T12: -0.0511 REMARK 3 T13: -0.0363 T23: 0.0708 REMARK 3 L TENSOR REMARK 3 L11: 1.5571 L22: 2.5850 REMARK 3 L33: 2.6241 L12: 0.5526 REMARK 3 L13: -0.3730 L23: 1.3715 REMARK 3 S TENSOR REMARK 3 S11: 0.0604 S12: -0.1580 S13: -0.1656 REMARK 3 S21: 0.0222 S22: -0.0060 S23: 0.1174 REMARK 3 S31: 0.1616 S32: -0.3168 S33: -0.0544 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY REMARK 4 REMARK 4 2X7G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1290043049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22306 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 45.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1WBP REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5M AMMONIUM SULPHATE, 0.1M SODIUM REMARK 280 ACETATE PH4.75 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.19667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.39333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 60.39333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.19667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 60 REMARK 465 MET A 61 REMARK 465 GLY A 62 REMARK 465 SER A 63 REMARK 465 ASP A 64 REMARK 465 ASP A 65 REMARK 465 GLU A 66 REMARK 465 GLU A 67 REMARK 465 GLN A 68 REMARK 465 GLU A 69 REMARK 465 ASP A 70 REMARK 465 PRO A 71 REMARK 465 ALA A 72 REMARK 465 ASP A 73 REMARK 465 TYR A 74 REMARK 465 CYS A 75 REMARK 465 LYS A 76 REMARK 465 GLY A 77 REMARK 465 GLY A 78 REMARK 465 TYR A 79 REMARK 465 HIS A 80 REMARK 465 ALA A 247 REMARK 465 THR A 248 REMARK 465 GLU A 249 REMARK 465 TRP A 250 REMARK 465 GLN A 251 REMARK 465 LYS A 252 REMARK 465 ALA A 253 REMARK 465 GLY A 254 REMARK 465 ALA A 255 REMARK 465 PRO A 256 REMARK 465 PRO A 257 REMARK 465 PRO A 258 REMARK 465 SER A 259 REMARK 465 GLY A 260 REMARK 465 SER A 261 REMARK 465 ALA A 262 REMARK 465 VAL A 263 REMARK 465 SER A 264 REMARK 465 THR A 265 REMARK 465 ALA A 266 REMARK 465 PRO A 267 REMARK 465 ALA A 519 REMARK 465 ALA A 520 REMARK 465 ASP A 521 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 83 CD CE NZ REMARK 470 LYS A 115 CE NZ REMARK 470 ARG A 199 NE CZ NH1 NH2 REMARK 470 ARG A 242 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 246 CG CD OE1 OE2 REMARK 470 LEU A 522 CG CD1 CD2 REMARK 470 LYS A 646 CG CD CE NZ REMARK 470 SER A 699 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 91 -20.53 -159.32 REMARK 500 ASP A 147 86.92 -152.13 REMARK 500 THR A 224 -2.95 75.57 REMARK 500 ASP A 225 49.98 -150.96 REMARK 500 GLN A 557 138.69 75.56 REMARK 500 SER A 573 -148.14 -153.69 REMARK 500 ARG A 637 -49.26 -20.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PVB A 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1707 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1708 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1709 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1710 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1711 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1712 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1713 REMARK 999 REMARK 999 SEQUENCE REMARK 999 SYNTHETIC CONSTRUCT WITH 268-518 REMOVED DBREF 2X7G A 60 61 PDB 2X7G 2X7G 60 61 DBREF 2X7G A 62 267 UNP C9JQJ0 C9JQJ0_HUMAN 62 267 DBREF 2X7G A 519 699 UNP C9JQJ0 C9JQJ0_HUMAN 519 699 SEQRES 1 A 389 SER MET GLY SER ASP ASP GLU GLU GLN GLU ASP PRO ALA SEQRES 2 A 389 ASP TYR CYS LYS GLY GLY TYR HIS PRO VAL LYS ILE GLY SEQRES 3 A 389 ASP LEU PHE ASN GLY ARG TYR HIS VAL ILE ARG LYS LEU SEQRES 4 A 389 GLY TRP GLY HIS PHE SER THR VAL TRP LEU CYS TRP ASP SEQRES 5 A 389 MET GLN GLY LYS ARG PHE VAL ALA MET LYS VAL VAL LYS SEQRES 6 A 389 SER ALA GLN HIS TYR THR GLU THR ALA LEU ASP GLU ILE SEQRES 7 A 389 LYS LEU LEU LYS CYS VAL ARG GLU SER ASP PRO SER ASP SEQRES 8 A 389 PRO ASN LYS ASP MET VAL VAL GLN LEU ILE ASP ASP PHE SEQRES 9 A 389 LYS ILE SER GLY MET ASN GLY ILE HIS VAL CYS MET VAL SEQRES 10 A 389 PHE GLU VAL LEU GLY HIS HIS LEU LEU LYS TRP ILE ILE SEQRES 11 A 389 LYS SER ASN TYR GLN GLY LEU PRO VAL ARG CYS VAL LYS SEQRES 12 A 389 SER ILE ILE ARG GLN VAL LEU GLN GLY LEU ASP TYR LEU SEQRES 13 A 389 HIS SER LYS CYS LYS ILE ILE HIS THR ASP ILE LYS PRO SEQRES 14 A 389 GLU ASN ILE LEU MET CYS VAL ASP ASP ALA TYR VAL ARG SEQRES 15 A 389 ARG MET ALA ALA GLU ALA THR GLU TRP GLN LYS ALA GLY SEQRES 16 A 389 ALA PRO PRO PRO SER GLY SER ALA VAL SER THR ALA PRO SEQRES 17 A 389 ALA ALA ASP LEU LEU VAL ASN PRO LEU ASP PRO ARG ASN SEQRES 18 A 389 ALA ASP LYS ILE ARG VAL LYS ILE ALA ASP LEU GLY ASN SEQRES 19 A 389 ALA CYS TRP VAL HIS LYS HIS PHE THR GLU ASP ILE GLN SEQRES 20 A 389 THR ARG GLN TYR ARG SER ILE GLU VAL LEU ILE GLY ALA SEQRES 21 A 389 GLY TYR SER THR PRO ALA ASP ILE TRP SER THR ALA CYS SEQRES 22 A 389 MET ALA PHE GLU LEU ALA THR GLY ASP TYR LEU PHE GLU SEQRES 23 A 389 PRO HIS SER GLY GLU ASP TYR SER ARG ASP GLU ASP HIS SEQRES 24 A 389 ILE ALA HIS ILE ILE GLU LEU LEU GLY SER ILE PRO ARG SEQRES 25 A 389 HIS PHE ALA LEU SER GLY LYS TYR SER ARG GLU PHE PHE SEQRES 26 A 389 ASN ARG ARG GLY GLU LEU ARG HIS ILE THR LYS LEU LYS SEQRES 27 A 389 PRO TRP SER LEU PHE ASP VAL LEU VAL GLU LYS TYR GLY SEQRES 28 A 389 TRP PRO HIS GLU ASP ALA ALA GLN PHE THR ASP PHE LEU SEQRES 29 A 389 ILE PRO MET LEU GLU MET VAL PRO GLU LYS ARG ALA SER SEQRES 30 A 389 ALA GLY GLU CYS LEU ARG HIS PRO TRP LEU ASN SER HET PVB A 800 30 HET SO4 A1700 5 HET SO4 A1701 5 HET SO4 A1702 5 HET SO4 A1703 5 HET SO4 A1704 5 HET SO4 A1705 5 HET SO4 A1706 5 HET ACT A1707 4 HET EDO A1708 4 HET EDO A1709 4 HET EDO A1710 4 HET EDO A1711 4 HET EDO A1712 4 HET EDO A1713 4 HETNAM PVB PURVALANOL B HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN PVB 2-CHLORO-4-{[2-{[(1R)-1-(HYDROXYMETHYL)-2- HETSYN 2 PVB METHYLPROPYL]AMINO}-9-(1-METHYLETHYL)-9H-PURIN-6- HETSYN 3 PVB YL]AMINO}BENZOIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PVB C20 H25 CL N6 O3 FORMUL 3 SO4 7(O4 S 2-) FORMUL 10 ACT C2 H3 O2 1- FORMUL 11 EDO 6(C2 H6 O2) FORMUL 17 HOH *111(H2 O) HELIX 1 1 ALA A 126 SER A 146 1 21 HELIX 2 2 ASP A 150 MET A 155 5 6 HELIX 3 3 HIS A 183 SER A 191 1 9 HELIX 4 4 PRO A 197 LYS A 218 1 22 HELIX 5 5 LYS A 227 GLU A 229 5 3 HELIX 6 6 ASP A 236 ALA A 245 1 10 HELIX 7 7 ASP A 528 ALA A 532 5 5 HELIX 8 8 ASP A 541 ALA A 545 5 5 HELIX 9 9 THR A 558 ARG A 562 5 5 HELIX 10 10 SER A 563 GLY A 569 1 7 HELIX 11 11 THR A 574 GLY A 591 1 18 HELIX 12 12 SER A 604 GLY A 618 1 15 HELIX 13 13 PRO A 621 LEU A 626 1 6 HELIX 14 14 TYR A 630 PHE A 635 1 6 HELIX 15 15 SER A 651 GLY A 661 1 11 HELIX 16 16 PRO A 663 LEU A 678 1 16 HELIX 17 17 VAL A 681 ARG A 685 5 5 HELIX 18 18 SER A 687 ARG A 693 1 7 HELIX 19 19 HIS A 694 ASN A 698 5 5 SHEET 1 AA 6 LEU A 87 PHE A 88 0 SHEET 2 AA 6 TYR A 92 TRP A 100 -1 O TYR A 92 N PHE A 88 SHEET 3 AA 6 SER A 104 ASP A 111 -1 O VAL A 106 N LEU A 98 SHEET 4 AA 6 ARG A 116 VAL A 123 -1 O ARG A 116 N ASP A 111 SHEET 5 AA 6 GLY A 170 PHE A 177 -1 O VAL A 173 N VAL A 123 SHEET 6 AA 6 ASP A 161 GLY A 167 -1 O ASP A 161 N VAL A 176 SHEET 1 AB 2 ILE A 221 ILE A 222 0 SHEET 2 AB 2 CYS A 546 TRP A 547 -1 O CYS A 546 N ILE A 222 SHEET 1 AC 2 ILE A 231 MET A 233 0 SHEET 2 AC 2 VAL A 537 ILE A 539 -1 O LYS A 538 N LEU A 232 SITE 1 AC1 11 LEU A 98 TRP A 100 GLY A 101 ALA A 119 SITE 2 AC1 11 GLU A 178 LEU A 180 HIS A 182 HIS A 183 SITE 3 AC1 11 LEU A 232 TYR A 239 EDO A1708 SITE 1 AC2 8 TYR A 593 ARG A 632 ASN A 636 ARG A 637 SITE 2 AC2 8 ARG A 642 HOH A2027 HOH A2105 HOH A2106 SITE 1 AC3 4 SER A 687 GLY A 689 ARG A 693 HOH A2107 SITE 1 AC4 4 GLY A 101 HIS A 102 PHE A 103 SER A 104 SITE 1 AC5 4 ARG A 559 ARG A 562 ARG A 605 HOH A2108 SITE 1 AC6 4 HIS A 598 SER A 599 ARG A 605 ARG A 622 SITE 1 AC7 2 ARG A 622 HIS A 623 SITE 1 AC8 5 ARG A 605 ARG A 637 ARG A 638 ACT A1707 SITE 2 AC8 5 HOH A2109 SITE 1 AC9 3 GLN A 560 ARG A 637 SO4 A1706 SITE 1 BC1 5 GLU A 136 ALA A 540 ASP A 541 LEU A 542 SITE 2 BC1 5 PVB A 800 SITE 1 BC2 4 ASP A 150 ASN A 152 ASP A 213 HOH A2110 SITE 1 BC3 6 SER A 166 SER A 651 PHE A 653 THR A 671 SITE 2 BC3 6 EDO A1713 HOH A2111 SITE 1 BC4 2 LEU A 594 HOH A2094 SITE 1 BC5 7 PHE A 163 LYS A 164 PRO A 649 TRP A 650 SITE 2 BC5 7 SER A 651 ASP A 654 EDO A1713 SITE 1 BC6 5 LYS A 164 LEU A 616 PRO A 649 EDO A1710 SITE 2 BC6 5 EDO A1712 CRYST1 110.310 110.310 90.590 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009065 0.005234 0.000000 0.00000 SCALE2 0.000000 0.010468 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011039 0.00000