data_2X7N # _entry.id 2X7N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.296 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2X7N PDBE EBI-43073 WWPDB D_1290043073 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1K5Y unspecified ;STRUCTURE OF THE TRANSLATING 80S RIBOSOME FROM YEAST, OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 15A CRYO-EM MAP. THIS FILE 1K5Y CONTAINSTHE 60S RIBOSOMAL SUBUNIT. THE FILE 1K5X CONTAINS THE 40S RIBOSOMAL SUBUNIT, THE P- SITE BOUND TRNA AND THE MRNA CODON. ; PDB 1G62 unspecified 'CRYSTAL STRUCTURE OF S.CEREVISIAE EIF6' PDB 1S1I unspecified ;STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1I, CONTAINS 60S SUBUNIT. THE 40S RIBOSOMAL SUBUNIT ISIN FILE 1S1H. ; EMDB EMD-1705 'associated EM volume' 'MECHANISM OF EIF6S ANTI-ASSOCIATION ACTIVITY' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2X7N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-03-02 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gartmann, M.' 1 'Blau, M.' 2 'Armache, J.-P.' 3 'Mielke, T.' 4 'Topf, M.' 5 'Beckmann, R.' 6 # _citation.id primary _citation.title 'Mechanism of Eif6-Mediated Inhibition of Ribosomal Subunit Joining.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 14848 _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20356839 _citation.pdbx_database_id_DOI 10.1074/JBC.C109.096057 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gartmann, M.' 1 ? primary 'Blau, M.' 2 ? primary 'Armache, J.-P.' 3 ? primary 'Mielke, T.' 4 ? primary 'Topf, M.' 5 ? primary 'Beckmann, R.' 6 ? # _cell.entry_id 2X7N _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X7N _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'SARCIN-RICIN LOOP' 9042.445 1 ? ? 2684-2711 ? 2 polymer nat 'EUKARYOTIC TRANSLATION INITIATION FACTOR 6' 24156.150 1 ? ? 'RESIDUES 1-224' ? 3 polymer nat '60S RIBOSOMAL PROTEIN L23' 14047.472 1 ? ? 'RESIDUES 6-137' ? 4 polymer nat '60S RIBOSOMAL PROTEIN L24-A' 6550.665 1 ? ? 'RESIDUES 1-56' ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 EIF-6 3 'YL32, L17A' 4 'L30, YL221, RP29' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no ACCGUAUAGUACGAGAGGAACUACGGUU ACCGUAUAGUACGAGAGGAACUACGGUU A ? 2 'polypeptide(L)' no no ;MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQE LQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGL VHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRL ; ;MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQE LQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGL VHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRL ; B ? 3 'polypeptide(L)' no no ;AQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSW RRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV ; ;AQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSW RRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV ; C ? 4 'polypeptide(L)' no no MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFR MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFR D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 C n 1 3 C n 1 4 G n 1 5 U n 1 6 A n 1 7 U n 1 8 A n 1 9 G n 1 10 U n 1 11 A n 1 12 C n 1 13 G n 1 14 A n 1 15 G n 1 16 A n 1 17 G n 1 18 G n 1 19 A n 1 20 A n 1 21 C n 1 22 U n 1 23 A n 1 24 C n 1 25 G n 1 26 G n 1 27 U n 1 28 U n 2 1 MET n 2 2 ALA n 2 3 THR n 2 4 ARG n 2 5 THR n 2 6 GLN n 2 7 PHE n 2 8 GLU n 2 9 ASN n 2 10 SER n 2 11 ASN n 2 12 GLU n 2 13 ILE n 2 14 GLY n 2 15 VAL n 2 16 PHE n 2 17 SER n 2 18 LYS n 2 19 LEU n 2 20 THR n 2 21 ASN n 2 22 THR n 2 23 TYR n 2 24 CYS n 2 25 LEU n 2 26 VAL n 2 27 ALA n 2 28 VAL n 2 29 GLY n 2 30 GLY n 2 31 SER n 2 32 GLU n 2 33 ASN n 2 34 PHE n 2 35 TYR n 2 36 SER n 2 37 ALA n 2 38 PHE n 2 39 GLU n 2 40 ALA n 2 41 GLU n 2 42 LEU n 2 43 GLY n 2 44 ASP n 2 45 ALA n 2 46 ILE n 2 47 PRO n 2 48 ILE n 2 49 VAL n 2 50 HIS n 2 51 THR n 2 52 THR n 2 53 ILE n 2 54 ALA n 2 55 GLY n 2 56 THR n 2 57 ARG n 2 58 ILE n 2 59 ILE n 2 60 GLY n 2 61 ARG n 2 62 MET n 2 63 THR n 2 64 ALA n 2 65 GLY n 2 66 ASN n 2 67 ARG n 2 68 ARG n 2 69 GLY n 2 70 LEU n 2 71 LEU n 2 72 VAL n 2 73 PRO n 2 74 THR n 2 75 GLN n 2 76 THR n 2 77 THR n 2 78 ASP n 2 79 GLN n 2 80 GLU n 2 81 LEU n 2 82 GLN n 2 83 HIS n 2 84 LEU n 2 85 ARG n 2 86 ASN n 2 87 SER n 2 88 LEU n 2 89 PRO n 2 90 ASP n 2 91 SER n 2 92 VAL n 2 93 LYS n 2 94 ILE n 2 95 GLN n 2 96 ARG n 2 97 VAL n 2 98 GLU n 2 99 GLU n 2 100 ARG n 2 101 LEU n 2 102 SER n 2 103 ALA n 2 104 LEU n 2 105 GLY n 2 106 ASN n 2 107 VAL n 2 108 ILE n 2 109 CYS n 2 110 CYS n 2 111 ASN n 2 112 ASP n 2 113 TYR n 2 114 VAL n 2 115 ALA n 2 116 LEU n 2 117 VAL n 2 118 HIS n 2 119 PRO n 2 120 ASP n 2 121 ILE n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 GLU n 2 127 GLU n 2 128 LEU n 2 129 ILE n 2 130 SER n 2 131 ASP n 2 132 VAL n 2 133 LEU n 2 134 GLY n 2 135 VAL n 2 136 GLU n 2 137 VAL n 2 138 PHE n 2 139 ARG n 2 140 GLN n 2 141 THR n 2 142 ILE n 2 143 SER n 2 144 GLY n 2 145 ASN n 2 146 ILE n 2 147 LEU n 2 148 VAL n 2 149 GLY n 2 150 SER n 2 151 TYR n 2 152 CYS n 2 153 SER n 2 154 LEU n 2 155 SER n 2 156 ASN n 2 157 GLN n 2 158 GLY n 2 159 GLY n 2 160 LEU n 2 161 VAL n 2 162 HIS n 2 163 PRO n 2 164 GLN n 2 165 THR n 2 166 SER n 2 167 VAL n 2 168 GLN n 2 169 ASP n 2 170 GLN n 2 171 GLU n 2 172 GLU n 2 173 LEU n 2 174 SER n 2 175 SER n 2 176 LEU n 2 177 LEU n 2 178 GLN n 2 179 VAL n 2 180 PRO n 2 181 LEU n 2 182 VAL n 2 183 ALA n 2 184 GLY n 2 185 THR n 2 186 VAL n 2 187 ASN n 2 188 ARG n 2 189 GLY n 2 190 SER n 2 191 SER n 2 192 VAL n 2 193 VAL n 2 194 GLY n 2 195 ALA n 2 196 GLY n 2 197 MET n 2 198 VAL n 2 199 VAL n 2 200 ASN n 2 201 ASP n 2 202 TYR n 2 203 LEU n 2 204 ALA n 2 205 VAL n 2 206 THR n 2 207 GLY n 2 208 LEU n 2 209 ASP n 2 210 THR n 2 211 THR n 2 212 ALA n 2 213 PRO n 2 214 GLU n 2 215 LEU n 2 216 SER n 2 217 VAL n 2 218 ILE n 2 219 GLU n 2 220 SER n 2 221 ILE n 2 222 PHE n 2 223 ARG n 2 224 LEU n 3 1 ALA n 3 2 GLN n 3 3 GLY n 3 4 THR n 3 5 LYS n 3 6 PHE n 3 7 ARG n 3 8 ILE n 3 9 SER n 3 10 LEU n 3 11 GLY n 3 12 LEU n 3 13 PRO n 3 14 VAL n 3 15 GLY n 3 16 ALA n 3 17 ILE n 3 18 MET n 3 19 ASN n 3 20 CYS n 3 21 ALA n 3 22 ASP n 3 23 ASN n 3 24 SER n 3 25 GLY n 3 26 ALA n 3 27 ARG n 3 28 ASN n 3 29 LEU n 3 30 TYR n 3 31 ILE n 3 32 ILE n 3 33 ALA n 3 34 VAL n 3 35 LYS n 3 36 GLY n 3 37 SER n 3 38 GLY n 3 39 SER n 3 40 ARG n 3 41 LEU n 3 42 ASN n 3 43 ARG n 3 44 LEU n 3 45 PRO n 3 46 ALA n 3 47 ALA n 3 48 SER n 3 49 LEU n 3 50 GLY n 3 51 ASP n 3 52 MET n 3 53 VAL n 3 54 MET n 3 55 ALA n 3 56 THR n 3 57 VAL n 3 58 LYS n 3 59 LYS n 3 60 GLY n 3 61 LYS n 3 62 PRO n 3 63 GLU n 3 64 LEU n 3 65 ARG n 3 66 LYS n 3 67 LYS n 3 68 VAL n 3 69 MET n 3 70 PRO n 3 71 ALA n 3 72 ILE n 3 73 VAL n 3 74 VAL n 3 75 ARG n 3 76 GLN n 3 77 ALA n 3 78 LYS n 3 79 SER n 3 80 TRP n 3 81 ARG n 3 82 ARG n 3 83 ARG n 3 84 ASP n 3 85 GLY n 3 86 VAL n 3 87 PHE n 3 88 LEU n 3 89 TYR n 3 90 PHE n 3 91 GLU n 3 92 ASP n 3 93 ASN n 3 94 ALA n 3 95 GLY n 3 96 VAL n 3 97 ILE n 3 98 ALA n 3 99 ASN n 3 100 PRO n 3 101 LYS n 3 102 GLY n 3 103 GLU n 3 104 MET n 3 105 LYS n 3 106 GLY n 3 107 SER n 3 108 ALA n 3 109 ILE n 3 110 THR n 3 111 GLY n 3 112 PRO n 3 113 VAL n 3 114 GLY n 3 115 LYS n 3 116 GLU n 3 117 CYS n 3 118 ALA n 3 119 ASP n 3 120 LEU n 3 121 TRP n 3 122 PRO n 3 123 ARG n 3 124 VAL n 3 125 ALA n 3 126 SER n 3 127 ASN n 3 128 SER n 3 129 GLY n 3 130 VAL n 3 131 VAL n 3 132 VAL n 4 1 MET n 4 2 LYS n 4 3 VAL n 4 4 GLU n 4 5 ILE n 4 6 ASP n 4 7 SER n 4 8 PHE n 4 9 SER n 4 10 GLY n 4 11 ALA n 4 12 LYS n 4 13 ILE n 4 14 TYR n 4 15 PRO n 4 16 GLY n 4 17 ARG n 4 18 GLY n 4 19 THR n 4 20 LEU n 4 21 PHE n 4 22 VAL n 4 23 ARG n 4 24 GLY n 4 25 ASP n 4 26 SER n 4 27 LYS n 4 28 ILE n 4 29 PHE n 4 30 ARG n 4 31 PHE n 4 32 GLN n 4 33 ASN n 4 34 SER n 4 35 LYS n 4 36 SER n 4 37 ALA n 4 38 SER n 4 39 LEU n 4 40 PHE n 4 41 LYS n 4 42 GLN n 4 43 ARG n 4 44 LYS n 4 45 ASN n 4 46 PRO n 4 47 ARG n 4 48 ARG n 4 49 ILE n 4 50 ALA n 4 51 TRP n 4 52 THR n 4 53 VAL n 4 54 LEU n 4 55 PHE n 4 56 ARG n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ;BAKER'S YEAST ; 'SACCHAROMYCES CEREVISIAE' 4932 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ;BAKER'S YEAST ; 'SACCHAROMYCES CEREVISIAE' 4932 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ;BAKER'S YEAST ; 'SACCHAROMYCES CEREVISIAE' 4932 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? ;BAKER'S YEAST ; 'SACCHAROMYCES CEREVISIAE' 4932 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2X7N 1 ? ? 2X7N ? 2 UNP IF6_YEAST 2 ? ? Q12522 ? 3 UNP RL23_YEAST 3 ? ? P04451 ? 4 UNP RL24A_YEAST 4 ? ? P04449 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2X7N A 1 ? 28 ? 2X7N 2684 ? 2711 ? 2684 2711 2 2 2X7N B 1 ? 224 ? Q12522 1 ? 224 ? 1 224 3 3 2X7N C 1 ? 132 ? P04451 6 ? 137 ? 1 132 4 4 2X7N D 1 ? 56 ? P04449 1 ? 56 ? 1 56 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2X7N _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 2X7N _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 11.80 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3137 _refine_hist.pdbx_number_atoms_nucleic_acid 600 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3737 _refine_hist.d_res_high 11.80 _refine_hist.d_res_low . # _struct.entry_id 2X7N _struct.title 'Mechanism of eIF6s anti-association activity' _struct.pdbx_descriptor 'EUKARYOTIC TRANSLATION INITIATION FACTOR 6, 60S RIBOSOMAL PROTEIN L23, 60S RIBOSOMAL PROTEIN L24-A/RNA Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2X7N _struct_keywords.pdbx_keywords 'RIBOSOMAL PROTEIN/RNA' _struct_keywords.text 'RIBOSOMAL PROTEIN-RNA COMPLEX, INITIATION FACTOR, PROTEIN BIOSYNTHESIS, RIBOSOMAL PROTEIN, RIBONUCLEOPROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU B 12 ? PHE B 16 ? GLU B 12 PHE B 16 1 ? 5 HELX_P HELX_P2 2 SER B 31 ? GLY B 43 ? SER B 31 GLY B 43 1 ? 13 HELX_P HELX_P3 3 ILE B 58 ? THR B 63 ? ILE B 58 THR B 63 1 ? 6 HELX_P HELX_P4 4 THR B 77 ? LEU B 88 ? THR B 77 LEU B 88 1 ? 12 HELX_P HELX_P5 5 ALA B 103 ? VAL B 107 ? ALA B 103 VAL B 107 1 ? 5 HELX_P HELX_P6 6 ASP B 122 ? GLY B 134 ? ASP B 122 GLY B 134 1 ? 13 HELX_P HELX_P7 7 LEU B 147 ? SER B 150 ? LEU B 147 SER B 150 5 ? 4 HELX_P HELX_P8 8 SER B 166 ? GLN B 178 ? SER B 166 GLN B 178 1 ? 13 HELX_P HELX_P9 9 VAL B 192 ? GLY B 196 ? VAL B 192 GLY B 196 1 ? 5 HELX_P HELX_P10 10 THR B 211 ? PHE B 222 ? THR B 211 PHE B 222 1 ? 12 HELX_P HELX_P11 11 LYS C 115 ? TRP C 121 ? LYS C 115 TRP C 121 1 ? 7 HELX_P HELX_P12 12 TRP C 121 ? SER C 126 ? TRP C 121 SER C 126 1 ? 6 HELX_P HELX_P13 13 ASN D 33 ? ARG D 43 ? ASN D 33 ARG D 43 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A A 1 N1 ? ? ? 1_555 A U 27 N3 ? ? A A 2684 A U 2710 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A A 1 N6 ? ? ? 1_555 A U 27 O4 ? ? A A 2684 A U 2710 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 2685 A G 2709 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 2685 A G 2709 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 2685 A G 2709 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 25 N1 ? ? A C 2686 A G 2708 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 25 O6 ? ? A C 2686 A G 2708 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 25 N2 ? ? A C 2686 A G 2708 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 24 N3 ? ? A G 2687 A C 2707 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 24 O2 ? ? A G 2687 A C 2707 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 24 N4 ? ? A G 2687 A C 2707 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 23 N1 ? ? A U 2688 A A 2706 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 23 N6 ? ? A U 2688 A A 2706 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 22 N3 ? ? A A 2689 A U 2705 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 22 O4 ? ? A A 2689 A U 2705 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A U 7 O2 ? ? ? 1_555 A C 21 N4 ? ? A U 2690 A C 2704 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? hydrog17 hydrog ? ? A A 8 N6 ? ? ? 1_555 A A 20 N7 ? ? A A 2691 A A 2703 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? hydrog18 hydrog ? ? A A 8 N7 ? ? ? 1_555 A A 20 N6 ? ? A A 2691 A A 2703 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? hydrog19 hydrog ? ? A U 10 N3 ? ? ? 1_555 A A 19 N7 ? ? A U 2693 A A 2702 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog20 hydrog ? ? A U 10 O2 ? ? ? 1_555 A A 19 N6 ? ? A U 2693 A A 2702 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog21 hydrog ? ? A A 11 N6 ? ? ? 1_555 A G 18 N3 ? ? A A 2694 A G 2701 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog22 hydrog ? ? A A 11 N7 ? ? ? 1_555 A G 18 N2 ? ? A A 2694 A G 2701 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog23 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 17 N1 ? ? A C 2695 A G 2700 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 17 O6 ? ? A C 2695 A G 2700 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 17 N2 ? ? A C 2695 A G 2700 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? A G 13 N2 ? ? ? 1_555 A A 16 N7 ? ? A G 2696 A A 2699 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details BA ? 3 ? BB ? 3 ? BC ? 3 ? BD ? 3 ? BE ? 3 ? CA ? 3 ? CB ? 2 ? CC ? 6 ? CD ? 2 ? DA ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense BA 1 2 ? parallel BA 2 3 ? anti-parallel BB 1 2 ? anti-parallel BB 2 3 ? parallel BC 1 2 ? anti-parallel BC 2 3 ? parallel BD 1 2 ? anti-parallel BD 2 3 ? parallel BE 1 2 ? anti-parallel BE 2 3 ? parallel CA 1 2 ? anti-parallel CA 2 3 ? anti-parallel CB 1 2 ? anti-parallel CC 1 2 ? anti-parallel CC 2 3 ? anti-parallel CC 3 4 ? anti-parallel CC 4 5 ? anti-parallel CC 5 6 ? parallel CD 1 2 ? parallel DA 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id BA 1 ALA B 2 ? THR B 5 ? ALA B 2 THR B 5 BA 2 ALA B 204 ? GLY B 207 ? ALA B 204 GLY B 207 BA 3 MET B 197 ? VAL B 199 ? MET B 197 VAL B 199 BB 1 SER B 17 ? LEU B 19 ? SER B 17 LEU B 19 BB 2 CYS B 24 ? ALA B 27 ? CYS B 24 ALA B 27 BB 3 ILE B 48 ? THR B 51 ? ILE B 48 THR B 51 BC 1 ALA B 64 ? GLY B 65 ? ALA B 64 GLY B 65 BC 2 GLY B 69 ? PRO B 73 ? GLY B 69 PRO B 73 BC 3 LYS B 93 ? VAL B 97 ? LYS B 93 VAL B 97 BD 1 ILE B 108 ? CYS B 110 ? ILE B 108 CYS B 110 BD 2 VAL B 114 ? VAL B 117 ? VAL B 114 VAL B 117 BD 3 GLU B 136 ? ARG B 139 ? GLU B 136 ARG B 139 BE 1 CYS B 152 ? LEU B 154 ? CYS B 152 LEU B 154 BE 2 GLY B 159 ? VAL B 161 ? GLY B 159 VAL B 161 BE 3 LEU B 181 ? ALA B 183 ? LEU B 181 ALA B 183 CA 1 ARG C 7 ? ILE C 8 ? ARG C 7 ILE C 8 CA 2 TRP C 80 ? ARG C 81 ? TRP C 80 ARG C 81 CA 3 PHE C 87 ? LEU C 88 ? PHE C 87 LEU C 88 CB 1 LEU C 12 ? PRO C 13 ? LEU C 12 PRO C 13 CB 2 ALA C 46 ? ALA C 47 ? ALA C 46 ALA C 47 CC 1 ILE C 17 ? CYS C 20 ? ILE C 17 CYS C 20 CC 2 ALA C 26 ? GLY C 36 ? ALA C 26 GLY C 36 CC 3 MET C 52 ? GLY C 60 ? MET C 52 GLY C 60 CC 4 VAL C 68 ? ARG C 75 ? VAL C 68 ARG C 75 CC 5 ALA C 94 ? ILE C 97 ? ALA C 94 ILE C 97 CC 6 ILE C 17 ? CYS C 20 ? ILE C 17 CYS C 20 CD 1 PRO C 112 ? GLY C 114 ? PRO C 112 GLY C 114 CD 2 VAL C 130 ? VAL C 132 ? VAL C 130 VAL C 132 DA 1 THR D 19 ? VAL D 22 ? THR D 19 VAL D 22 DA 2 ILE D 28 ? PHE D 31 ? ILE D 28 PHE D 31 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id BA 1 2 N THR B 3 ? N THR B 3 O ALA B 204 ? O ALA B 204 BA 2 3 N VAL B 205 ? N VAL B 205 O VAL B 198 ? O VAL B 198 BB 1 2 N LYS B 18 ? N LYS B 18 O LEU B 25 ? O LEU B 25 BB 2 3 N VAL B 26 ? N VAL B 26 O VAL B 49 ? O VAL B 49 BC 1 2 N ALA B 64 ? N ALA B 64 O LEU B 71 ? O LEU B 71 BC 2 3 N LEU B 70 ? N LEU B 70 O LYS B 93 ? O LYS B 93 BD 1 2 N CYS B 109 ? N CYS B 109 O LEU B 116 ? O LEU B 116 BD 2 3 N ALA B 115 ? N ALA B 115 O GLU B 136 ? O GLU B 136 BE 1 2 N SER B 153 ? N SER B 153 O LEU B 160 ? O LEU B 160 BE 2 3 N VAL B 161 ? N VAL B 161 O VAL B 182 ? O VAL B 182 CA 1 2 N ARG C 7 ? N ARG C 7 O ARG C 81 ? O ARG C 81 CA 2 3 N TRP C 80 ? N TRP C 80 O LEU C 88 ? O LEU C 88 CB 1 2 N LEU C 12 ? N LEU C 12 O ALA C 47 ? O ALA C 47 CC 1 2 N CYS C 20 ? N CYS C 20 O ARG C 27 ? O ARG C 27 CC 2 3 N LYS C 35 ? N LYS C 35 O MET C 52 ? O MET C 52 CC 3 4 N ALA C 55 ? N ALA C 55 O MET C 69 ? O MET C 69 CC 4 5 N ARG C 75 ? N ARG C 75 O ALA C 94 ? O ALA C 94 CC 5 6 N GLY C 95 ? N GLY C 95 O ASN C 19 ? O ASN C 19 CD 1 2 N VAL C 113 ? N VAL C 113 O VAL C 130 ? O VAL C 130 DA 1 2 N PHE D 21 ? N PHE D 21 O PHE D 29 ? O PHE D 29 # _database_PDB_matrix.entry_id 2X7N _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2X7N _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _database_PDB_caveat.text 'ILE C 109 CBETA WRONG HAND' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 2684 2684 A A A . n A 1 2 C 2 2685 2685 C C A . n A 1 3 C 3 2686 2686 C C A . n A 1 4 G 4 2687 2687 G G A . n A 1 5 U 5 2688 2688 U U A . n A 1 6 A 6 2689 2689 A A A . n A 1 7 U 7 2690 2690 U U A . n A 1 8 A 8 2691 2691 A A A . n A 1 9 G 9 2692 2692 G G A . n A 1 10 U 10 2693 2693 U U A . n A 1 11 A 11 2694 2694 A A A . n A 1 12 C 12 2695 2695 C C A . n A 1 13 G 13 2696 2696 G G A . n A 1 14 A 14 2697 2697 A A A . n A 1 15 G 15 2698 2698 G G A . n A 1 16 A 16 2699 2699 A A A . n A 1 17 G 17 2700 2700 G G A . n A 1 18 G 18 2701 2701 G G A . n A 1 19 A 19 2702 2702 A A A . n A 1 20 A 20 2703 2703 A A A . n A 1 21 C 21 2704 2704 C C A . n A 1 22 U 22 2705 2705 U U A . n A 1 23 A 23 2706 2706 A A A . n A 1 24 C 24 2707 2707 C C A . n A 1 25 G 25 2708 2708 G G A . n A 1 26 G 26 2709 2709 G G A . n A 1 27 U 27 2710 2710 U U A . n A 1 28 U 28 2711 2711 U U A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 ALA 2 2 2 ALA ALA B . n B 2 3 THR 3 3 3 THR THR B . n B 2 4 ARG 4 4 4 ARG ARG B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 PHE 7 7 7 PHE PHE B . n B 2 8 GLU 8 8 8 GLU GLU B . n B 2 9 ASN 9 9 9 ASN ASN B . n B 2 10 SER 10 10 10 SER SER B . n B 2 11 ASN 11 11 11 ASN ASN B . n B 2 12 GLU 12 12 12 GLU GLU B . n B 2 13 ILE 13 13 13 ILE ILE B . n B 2 14 GLY 14 14 14 GLY GLY B . n B 2 15 VAL 15 15 15 VAL VAL B . n B 2 16 PHE 16 16 16 PHE PHE B . n B 2 17 SER 17 17 17 SER SER B . n B 2 18 LYS 18 18 18 LYS LYS B . n B 2 19 LEU 19 19 19 LEU LEU B . n B 2 20 THR 20 20 20 THR THR B . n B 2 21 ASN 21 21 21 ASN ASN B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 TYR 23 23 23 TYR TYR B . n B 2 24 CYS 24 24 24 CYS CYS B . n B 2 25 LEU 25 25 25 LEU LEU B . n B 2 26 VAL 26 26 26 VAL VAL B . n B 2 27 ALA 27 27 27 ALA ALA B . n B 2 28 VAL 28 28 28 VAL VAL B . n B 2 29 GLY 29 29 29 GLY GLY B . n B 2 30 GLY 30 30 30 GLY GLY B . n B 2 31 SER 31 31 31 SER SER B . n B 2 32 GLU 32 32 32 GLU GLU B . n B 2 33 ASN 33 33 33 ASN ASN B . n B 2 34 PHE 34 34 34 PHE PHE B . n B 2 35 TYR 35 35 35 TYR TYR B . n B 2 36 SER 36 36 36 SER SER B . n B 2 37 ALA 37 37 37 ALA ALA B . n B 2 38 PHE 38 38 38 PHE PHE B . n B 2 39 GLU 39 39 39 GLU GLU B . n B 2 40 ALA 40 40 40 ALA ALA B . n B 2 41 GLU 41 41 41 GLU GLU B . n B 2 42 LEU 42 42 42 LEU LEU B . n B 2 43 GLY 43 43 43 GLY GLY B . n B 2 44 ASP 44 44 44 ASP ASP B . n B 2 45 ALA 45 45 45 ALA ALA B . n B 2 46 ILE 46 46 46 ILE ILE B . n B 2 47 PRO 47 47 47 PRO PRO B . n B 2 48 ILE 48 48 48 ILE ILE B . n B 2 49 VAL 49 49 49 VAL VAL B . n B 2 50 HIS 50 50 50 HIS HIS B . n B 2 51 THR 51 51 51 THR THR B . n B 2 52 THR 52 52 52 THR THR B . n B 2 53 ILE 53 53 53 ILE ILE B . n B 2 54 ALA 54 54 54 ALA ALA B . n B 2 55 GLY 55 55 55 GLY GLY B . n B 2 56 THR 56 56 56 THR THR B . n B 2 57 ARG 57 57 57 ARG ARG B . n B 2 58 ILE 58 58 58 ILE ILE B . n B 2 59 ILE 59 59 59 ILE ILE B . n B 2 60 GLY 60 60 60 GLY GLY B . n B 2 61 ARG 61 61 61 ARG ARG B . n B 2 62 MET 62 62 62 MET MET B . n B 2 63 THR 63 63 63 THR THR B . n B 2 64 ALA 64 64 64 ALA ALA B . n B 2 65 GLY 65 65 65 GLY GLY B . n B 2 66 ASN 66 66 66 ASN ASN B . n B 2 67 ARG 67 67 67 ARG ARG B . n B 2 68 ARG 68 68 68 ARG ARG B . n B 2 69 GLY 69 69 69 GLY GLY B . n B 2 70 LEU 70 70 70 LEU LEU B . n B 2 71 LEU 71 71 71 LEU LEU B . n B 2 72 VAL 72 72 72 VAL VAL B . n B 2 73 PRO 73 73 73 PRO PRO B . n B 2 74 THR 74 74 74 THR THR B . n B 2 75 GLN 75 75 75 GLN GLN B . n B 2 76 THR 76 76 76 THR THR B . n B 2 77 THR 77 77 77 THR THR B . n B 2 78 ASP 78 78 78 ASP ASP B . n B 2 79 GLN 79 79 79 GLN GLN B . n B 2 80 GLU 80 80 80 GLU GLU B . n B 2 81 LEU 81 81 81 LEU LEU B . n B 2 82 GLN 82 82 82 GLN GLN B . n B 2 83 HIS 83 83 83 HIS HIS B . n B 2 84 LEU 84 84 84 LEU LEU B . n B 2 85 ARG 85 85 85 ARG ARG B . n B 2 86 ASN 86 86 86 ASN ASN B . n B 2 87 SER 87 87 87 SER SER B . n B 2 88 LEU 88 88 88 LEU LEU B . n B 2 89 PRO 89 89 89 PRO PRO B . n B 2 90 ASP 90 90 90 ASP ASP B . n B 2 91 SER 91 91 91 SER SER B . n B 2 92 VAL 92 92 92 VAL VAL B . n B 2 93 LYS 93 93 93 LYS LYS B . n B 2 94 ILE 94 94 94 ILE ILE B . n B 2 95 GLN 95 95 95 GLN GLN B . n B 2 96 ARG 96 96 96 ARG ARG B . n B 2 97 VAL 97 97 97 VAL VAL B . n B 2 98 GLU 98 98 98 GLU GLU B . n B 2 99 GLU 99 99 99 GLU GLU B . n B 2 100 ARG 100 100 100 ARG ARG B . n B 2 101 LEU 101 101 101 LEU LEU B . n B 2 102 SER 102 102 102 SER SER B . n B 2 103 ALA 103 103 103 ALA ALA B . n B 2 104 LEU 104 104 104 LEU LEU B . n B 2 105 GLY 105 105 105 GLY GLY B . n B 2 106 ASN 106 106 106 ASN ASN B . n B 2 107 VAL 107 107 107 VAL VAL B . n B 2 108 ILE 108 108 108 ILE ILE B . n B 2 109 CYS 109 109 109 CYS CYS B . n B 2 110 CYS 110 110 110 CYS CYS B . n B 2 111 ASN 111 111 111 ASN ASN B . n B 2 112 ASP 112 112 112 ASP ASP B . n B 2 113 TYR 113 113 113 TYR TYR B . n B 2 114 VAL 114 114 114 VAL VAL B . n B 2 115 ALA 115 115 115 ALA ALA B . n B 2 116 LEU 116 116 116 LEU LEU B . n B 2 117 VAL 117 117 117 VAL VAL B . n B 2 118 HIS 118 118 118 HIS HIS B . n B 2 119 PRO 119 119 119 PRO PRO B . n B 2 120 ASP 120 120 120 ASP ASP B . n B 2 121 ILE 121 121 121 ILE ILE B . n B 2 122 ASP 122 122 122 ASP ASP B . n B 2 123 ARG 123 123 123 ARG ARG B . n B 2 124 GLU 124 124 124 GLU GLU B . n B 2 125 THR 125 125 125 THR THR B . n B 2 126 GLU 126 126 126 GLU GLU B . n B 2 127 GLU 127 127 127 GLU GLU B . n B 2 128 LEU 128 128 128 LEU LEU B . n B 2 129 ILE 129 129 129 ILE ILE B . n B 2 130 SER 130 130 130 SER SER B . n B 2 131 ASP 131 131 131 ASP ASP B . n B 2 132 VAL 132 132 132 VAL VAL B . n B 2 133 LEU 133 133 133 LEU LEU B . n B 2 134 GLY 134 134 134 GLY GLY B . n B 2 135 VAL 135 135 135 VAL VAL B . n B 2 136 GLU 136 136 136 GLU GLU B . n B 2 137 VAL 137 137 137 VAL VAL B . n B 2 138 PHE 138 138 138 PHE PHE B . n B 2 139 ARG 139 139 139 ARG ARG B . n B 2 140 GLN 140 140 140 GLN GLN B . n B 2 141 THR 141 141 141 THR THR B . n B 2 142 ILE 142 142 142 ILE ILE B . n B 2 143 SER 143 143 143 SER SER B . n B 2 144 GLY 144 144 144 GLY GLY B . n B 2 145 ASN 145 145 145 ASN ASN B . n B 2 146 ILE 146 146 146 ILE ILE B . n B 2 147 LEU 147 147 147 LEU LEU B . n B 2 148 VAL 148 148 148 VAL VAL B . n B 2 149 GLY 149 149 149 GLY GLY B . n B 2 150 SER 150 150 150 SER SER B . n B 2 151 TYR 151 151 151 TYR TYR B . n B 2 152 CYS 152 152 152 CYS CYS B . n B 2 153 SER 153 153 153 SER SER B . n B 2 154 LEU 154 154 154 LEU LEU B . n B 2 155 SER 155 155 155 SER SER B . n B 2 156 ASN 156 156 156 ASN ASN B . n B 2 157 GLN 157 157 157 GLN GLN B . n B 2 158 GLY 158 158 158 GLY GLY B . n B 2 159 GLY 159 159 159 GLY GLY B . n B 2 160 LEU 160 160 160 LEU LEU B . n B 2 161 VAL 161 161 161 VAL VAL B . n B 2 162 HIS 162 162 162 HIS HIS B . n B 2 163 PRO 163 163 163 PRO PRO B . n B 2 164 GLN 164 164 164 GLN GLN B . n B 2 165 THR 165 165 165 THR THR B . n B 2 166 SER 166 166 166 SER SER B . n B 2 167 VAL 167 167 167 VAL VAL B . n B 2 168 GLN 168 168 168 GLN GLN B . n B 2 169 ASP 169 169 169 ASP ASP B . n B 2 170 GLN 170 170 170 GLN GLN B . n B 2 171 GLU 171 171 171 GLU GLU B . n B 2 172 GLU 172 172 172 GLU GLU B . n B 2 173 LEU 173 173 173 LEU LEU B . n B 2 174 SER 174 174 174 SER SER B . n B 2 175 SER 175 175 175 SER SER B . n B 2 176 LEU 176 176 176 LEU LEU B . n B 2 177 LEU 177 177 177 LEU LEU B . n B 2 178 GLN 178 178 178 GLN GLN B . n B 2 179 VAL 179 179 179 VAL VAL B . n B 2 180 PRO 180 180 180 PRO PRO B . n B 2 181 LEU 181 181 181 LEU LEU B . n B 2 182 VAL 182 182 182 VAL VAL B . n B 2 183 ALA 183 183 183 ALA ALA B . n B 2 184 GLY 184 184 184 GLY GLY B . n B 2 185 THR 185 185 185 THR THR B . n B 2 186 VAL 186 186 186 VAL VAL B . n B 2 187 ASN 187 187 187 ASN ASN B . n B 2 188 ARG 188 188 188 ARG ARG B . n B 2 189 GLY 189 189 189 GLY GLY B . n B 2 190 SER 190 190 190 SER SER B . n B 2 191 SER 191 191 191 SER SER B . n B 2 192 VAL 192 192 192 VAL VAL B . n B 2 193 VAL 193 193 193 VAL VAL B . n B 2 194 GLY 194 194 194 GLY GLY B . n B 2 195 ALA 195 195 195 ALA ALA B . n B 2 196 GLY 196 196 196 GLY GLY B . n B 2 197 MET 197 197 197 MET MET B . n B 2 198 VAL 198 198 198 VAL VAL B . n B 2 199 VAL 199 199 199 VAL VAL B . n B 2 200 ASN 200 200 200 ASN ASN B . n B 2 201 ASP 201 201 201 ASP ASP B . n B 2 202 TYR 202 202 202 TYR TYR B . n B 2 203 LEU 203 203 203 LEU LEU B . n B 2 204 ALA 204 204 204 ALA ALA B . n B 2 205 VAL 205 205 205 VAL VAL B . n B 2 206 THR 206 206 206 THR THR B . n B 2 207 GLY 207 207 207 GLY GLY B . n B 2 208 LEU 208 208 208 LEU LEU B . n B 2 209 ASP 209 209 209 ASP ASP B . n B 2 210 THR 210 210 210 THR THR B . n B 2 211 THR 211 211 211 THR THR B . n B 2 212 ALA 212 212 212 ALA ALA B . n B 2 213 PRO 213 213 213 PRO PRO B . n B 2 214 GLU 214 214 214 GLU GLU B . n B 2 215 LEU 215 215 215 LEU LEU B . n B 2 216 SER 216 216 216 SER SER B . n B 2 217 VAL 217 217 217 VAL VAL B . n B 2 218 ILE 218 218 218 ILE ILE B . n B 2 219 GLU 219 219 219 GLU GLU B . n B 2 220 SER 220 220 220 SER SER B . n B 2 221 ILE 221 221 221 ILE ILE B . n B 2 222 PHE 222 222 222 PHE PHE B . n B 2 223 ARG 223 223 223 ARG ARG B . n B 2 224 LEU 224 224 224 LEU LEU B . n C 3 1 ALA 1 1 1 ALA ALA C . n C 3 2 GLN 2 2 2 GLN GLN C . n C 3 3 GLY 3 3 3 GLY GLY C . n C 3 4 THR 4 4 4 THR THR C . n C 3 5 LYS 5 5 5 LYS LYS C . n C 3 6 PHE 6 6 6 PHE PHE C . n C 3 7 ARG 7 7 7 ARG ARG C . n C 3 8 ILE 8 8 8 ILE ILE C . n C 3 9 SER 9 9 9 SER SER C . n C 3 10 LEU 10 10 10 LEU LEU C . n C 3 11 GLY 11 11 11 GLY GLY C . n C 3 12 LEU 12 12 12 LEU LEU C . n C 3 13 PRO 13 13 13 PRO PRO C . n C 3 14 VAL 14 14 14 VAL VAL C . n C 3 15 GLY 15 15 15 GLY GLY C . n C 3 16 ALA 16 16 16 ALA ALA C . n C 3 17 ILE 17 17 17 ILE ILE C . n C 3 18 MET 18 18 18 MET MET C . n C 3 19 ASN 19 19 19 ASN ASN C . n C 3 20 CYS 20 20 20 CYS CYS C . n C 3 21 ALA 21 21 21 ALA ALA C . n C 3 22 ASP 22 22 22 ASP ASP C . n C 3 23 ASN 23 23 23 ASN ASN C . n C 3 24 SER 24 24 24 SER SER C . n C 3 25 GLY 25 25 25 GLY GLY C . n C 3 26 ALA 26 26 26 ALA ALA C . n C 3 27 ARG 27 27 27 ARG ARG C . n C 3 28 ASN 28 28 28 ASN ASN C . n C 3 29 LEU 29 29 29 LEU LEU C . n C 3 30 TYR 30 30 30 TYR TYR C . n C 3 31 ILE 31 31 31 ILE ILE C . n C 3 32 ILE 32 32 32 ILE ILE C . n C 3 33 ALA 33 33 33 ALA ALA C . n C 3 34 VAL 34 34 34 VAL VAL C . n C 3 35 LYS 35 35 35 LYS LYS C . n C 3 36 GLY 36 36 36 GLY GLY C . n C 3 37 SER 37 37 37 SER SER C . n C 3 38 GLY 38 38 38 GLY GLY C . n C 3 39 SER 39 39 39 SER SER C . n C 3 40 ARG 40 40 40 ARG ARG C . n C 3 41 LEU 41 41 41 LEU LEU C . n C 3 42 ASN 42 42 42 ASN ASN C . n C 3 43 ARG 43 43 43 ARG ARG C . n C 3 44 LEU 44 44 44 LEU LEU C . n C 3 45 PRO 45 45 45 PRO PRO C . n C 3 46 ALA 46 46 46 ALA ALA C . n C 3 47 ALA 47 47 47 ALA ALA C . n C 3 48 SER 48 48 48 SER SER C . n C 3 49 LEU 49 49 49 LEU LEU C . n C 3 50 GLY 50 50 50 GLY GLY C . n C 3 51 ASP 51 51 51 ASP ASP C . n C 3 52 MET 52 52 52 MET MET C . n C 3 53 VAL 53 53 53 VAL VAL C . n C 3 54 MET 54 54 54 MET MET C . n C 3 55 ALA 55 55 55 ALA ALA C . n C 3 56 THR 56 56 56 THR THR C . n C 3 57 VAL 57 57 57 VAL VAL C . n C 3 58 LYS 58 58 58 LYS LYS C . n C 3 59 LYS 59 59 59 LYS LYS C . n C 3 60 GLY 60 60 60 GLY GLY C . n C 3 61 LYS 61 61 61 LYS LYS C . n C 3 62 PRO 62 62 62 PRO PRO C . n C 3 63 GLU 63 63 63 GLU GLU C . n C 3 64 LEU 64 64 64 LEU LEU C . n C 3 65 ARG 65 65 65 ARG ARG C . n C 3 66 LYS 66 66 66 LYS LYS C . n C 3 67 LYS 67 67 67 LYS LYS C . n C 3 68 VAL 68 68 68 VAL VAL C . n C 3 69 MET 69 69 69 MET MET C . n C 3 70 PRO 70 70 70 PRO PRO C . n C 3 71 ALA 71 71 71 ALA ALA C . n C 3 72 ILE 72 72 72 ILE ILE C . n C 3 73 VAL 73 73 73 VAL VAL C . n C 3 74 VAL 74 74 74 VAL VAL C . n C 3 75 ARG 75 75 75 ARG ARG C . n C 3 76 GLN 76 76 76 GLN GLN C . n C 3 77 ALA 77 77 77 ALA ALA C . n C 3 78 LYS 78 78 78 LYS LYS C . n C 3 79 SER 79 79 79 SER SER C . n C 3 80 TRP 80 80 80 TRP TRP C . n C 3 81 ARG 81 81 81 ARG ARG C . n C 3 82 ARG 82 82 82 ARG ARG C . n C 3 83 ARG 83 83 83 ARG ARG C . n C 3 84 ASP 84 84 84 ASP ASP C . n C 3 85 GLY 85 85 85 GLY GLY C . n C 3 86 VAL 86 86 86 VAL VAL C . n C 3 87 PHE 87 87 87 PHE PHE C . n C 3 88 LEU 88 88 88 LEU LEU C . n C 3 89 TYR 89 89 89 TYR TYR C . n C 3 90 PHE 90 90 90 PHE PHE C . n C 3 91 GLU 91 91 91 GLU GLU C . n C 3 92 ASP 92 92 92 ASP ASP C . n C 3 93 ASN 93 93 93 ASN ASN C . n C 3 94 ALA 94 94 94 ALA ALA C . n C 3 95 GLY 95 95 95 GLY GLY C . n C 3 96 VAL 96 96 96 VAL VAL C . n C 3 97 ILE 97 97 97 ILE ILE C . n C 3 98 ALA 98 98 98 ALA ALA C . n C 3 99 ASN 99 99 99 ASN ASN C . n C 3 100 PRO 100 100 100 PRO PRO C . n C 3 101 LYS 101 101 101 LYS LYS C . n C 3 102 GLY 102 102 102 GLY GLY C . n C 3 103 GLU 103 103 103 GLU GLU C . n C 3 104 MET 104 104 104 MET MET C . n C 3 105 LYS 105 105 105 LYS LYS C . n C 3 106 GLY 106 106 106 GLY GLY C . n C 3 107 SER 107 107 107 SER SER C . n C 3 108 ALA 108 108 108 ALA ALA C . n C 3 109 ILE 109 109 109 ILE ILE C . n C 3 110 THR 110 110 110 THR THR C . n C 3 111 GLY 111 111 111 GLY GLY C . n C 3 112 PRO 112 112 112 PRO PRO C . n C 3 113 VAL 113 113 113 VAL VAL C . n C 3 114 GLY 114 114 114 GLY GLY C . n C 3 115 LYS 115 115 115 LYS LYS C . n C 3 116 GLU 116 116 116 GLU GLU C . n C 3 117 CYS 117 117 117 CYS CYS C . n C 3 118 ALA 118 118 118 ALA ALA C . n C 3 119 ASP 119 119 119 ASP ASP C . n C 3 120 LEU 120 120 120 LEU LEU C . n C 3 121 TRP 121 121 121 TRP TRP C . n C 3 122 PRO 122 122 122 PRO PRO C . n C 3 123 ARG 123 123 123 ARG ARG C . n C 3 124 VAL 124 124 124 VAL VAL C . n C 3 125 ALA 125 125 125 ALA ALA C . n C 3 126 SER 126 126 126 SER SER C . n C 3 127 ASN 127 127 127 ASN ASN C . n C 3 128 SER 128 128 128 SER SER C . n C 3 129 GLY 129 129 129 GLY GLY C . n C 3 130 VAL 130 130 130 VAL VAL C . n C 3 131 VAL 131 131 131 VAL VAL C . n C 3 132 VAL 132 132 132 VAL VAL C . n D 4 1 MET 1 1 1 MET MET D . n D 4 2 LYS 2 2 2 LYS LYS D . n D 4 3 VAL 3 3 3 VAL VAL D . n D 4 4 GLU 4 4 4 GLU GLU D . n D 4 5 ILE 5 5 5 ILE ILE D . n D 4 6 ASP 6 6 6 ASP ASP D . n D 4 7 SER 7 7 7 SER SER D . n D 4 8 PHE 8 8 8 PHE PHE D . n D 4 9 SER 9 9 9 SER SER D . n D 4 10 GLY 10 10 10 GLY GLY D . n D 4 11 ALA 11 11 11 ALA ALA D . n D 4 12 LYS 12 12 12 LYS LYS D . n D 4 13 ILE 13 13 13 ILE ILE D . n D 4 14 TYR 14 14 14 TYR TYR D . n D 4 15 PRO 15 15 15 PRO PRO D . n D 4 16 GLY 16 16 16 GLY GLY D . n D 4 17 ARG 17 17 17 ARG ARG D . n D 4 18 GLY 18 18 18 GLY GLY D . n D 4 19 THR 19 19 19 THR THR D . n D 4 20 LEU 20 20 20 LEU LEU D . n D 4 21 PHE 21 21 21 PHE PHE D . n D 4 22 VAL 22 22 22 VAL VAL D . n D 4 23 ARG 23 23 23 ARG ARG D . n D 4 24 GLY 24 24 24 GLY GLY D . n D 4 25 ASP 25 25 25 ASP ASP D . n D 4 26 SER 26 26 26 SER SER D . n D 4 27 LYS 27 27 27 LYS LYS D . n D 4 28 ILE 28 28 28 ILE ILE D . n D 4 29 PHE 29 29 29 PHE PHE D . n D 4 30 ARG 30 30 30 ARG ARG D . n D 4 31 PHE 31 31 31 PHE PHE D . n D 4 32 GLN 32 32 32 GLN GLN D . n D 4 33 ASN 33 33 33 ASN ASN D . n D 4 34 SER 34 34 34 SER SER D . n D 4 35 LYS 35 35 35 LYS LYS D . n D 4 36 SER 36 36 36 SER SER D . n D 4 37 ALA 37 37 37 ALA ALA D . n D 4 38 SER 38 38 38 SER SER D . n D 4 39 LEU 39 39 39 LEU LEU D . n D 4 40 PHE 40 40 40 PHE PHE D . n D 4 41 LYS 41 41 41 LYS LYS D . n D 4 42 GLN 42 42 42 GLN GLN D . n D 4 43 ARG 43 43 43 ARG ARG D . n D 4 44 LYS 44 44 44 LYS LYS D . n D 4 45 ASN 45 45 45 ASN ASN D . n D 4 46 PRO 46 46 46 PRO PRO D . n D 4 47 ARG 47 47 47 ARG ARG D . n D 4 48 ARG 48 48 48 ARG ARG D . n D 4 49 ILE 49 49 49 ILE ILE D . n D 4 50 ALA 50 50 50 ALA ALA D . n D 4 51 TRP 51 51 51 TRP TRP D . n D 4 52 THR 52 52 52 THR THR D . n D 4 53 VAL 53 53 53 VAL VAL D . n D 4 54 LEU 54 54 54 LEU LEU D . n D 4 55 PHE 55 55 55 PHE PHE D . n D 4 56 ARG 56 56 56 ARG ARG D . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3780 ? 1 MORE -19.0 ? 1 'SSA (A^2)' 22400 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-31 2 'Structure model' 1 1 2013-07-17 3 'Structure model' 1 2 2017-08-30 4 'Structure model' 1 3 2018-10-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' Other 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' em_image_scans 2 3 'Structure model' entity 3 4 'Structure model' em_software 4 4 'Structure model' ndb_struct_na_base_pair # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity.src_method' 2 4 'Structure model' '_em_software.image_processing_id' 3 4 'Structure model' '_ndb_struct_na_base_pair.propeller' # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "CC" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 5-STRANDED BARREL THIS IS REPRESENTED BY A 6-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. ; # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 2X7N _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details METHOD--FLEX-EM _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.pdb_entry_id 1G62 _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.details ? # _em_3d_reconstruction.entry_id 2X7N _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.resolution 11.8 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details 'SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-1705.' _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.algorithm ? # _em_entity_assembly.id 1 _em_entity_assembly.name '60S-EIF6 COMPLEX' _em_entity_assembly.type RIBOSOME _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details 'CRYO-EM SINGLE-PARTICLE RECONSTRUCTION' _em_entity_assembly.oligomeric_details ? # _em_imaging.entry_id 2X7N _em_imaging.id 1 _em_imaging.specimen_id 1 _em_imaging.date ? _em_imaging.temperature 95 _em_imaging.microscope_model 'FEI TECNAI F30' _em_imaging.nominal_defocus_min ? _em_imaging.nominal_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 2.26 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 39000 _em_imaging.calibrated_magnification 38900 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 300 _em_imaging.details ? _em_imaging.specimen_holder_type . _em_imaging.specimen_holder_model . _em_imaging.citation_id ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details CARBON _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? # _em_vitrification.entry_id 2X7N _em_vitrification.id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.specimen_id 1 _em_vitrification.details ETHANE _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 2X7N _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 2X7N _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry C1 _em_single_particle_entity.image_processing_id 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP1 A U 2710 ? ? NE C ARG 7 ? ? 0.51 2 1 CB B ASP 78 ? ? CG D MET 1 ? ? 0.74 3 1 O C PRO 100 ? ? N C LYS 101 ? ? 1.40 4 1 NE2 B GLN 75 ? ? O D SER 26 ? ? 1.61 5 1 CA C ILE 109 ? ? N C THR 110 ? ? 1.62 6 1 OE1 B GLU 8 ? ? OE1 C GLN 2 ? ? 1.68 7 1 OP1 A U 2710 ? ? CZ C ARG 7 ? ? 1.72 8 1 OP1 A U 2710 ? ? CD C ARG 7 ? ? 1.74 9 1 O C LYS 101 ? ? N C GLY 102 ? ? 1.75 10 1 O C GLU 103 ? ? N C MET 104 ? ? 1.76 11 1 CA B ASP 78 ? ? CG D MET 1 ? ? 1.79 12 1 P A U 2710 ? ? NE C ARG 7 ? ? 1.83 13 1 N B ALA 103 ? ? O C GLY 129 ? ? 1.86 14 1 N B ASP 78 ? ? SD D MET 1 ? ? 1.89 15 1 CG B ASP 78 ? ? CE D MET 1 ? ? 1.90 16 1 OD2 B ASP 78 ? ? SD D MET 1 ? ? 1.90 17 1 CG B ASP 78 ? ? CG D MET 1 ? ? 1.92 18 1 CA B SER 102 ? ? CA C GLY 129 ? ? 1.93 19 1 CD2 C PHE 6 ? ? OE2 C GLU 116 ? ? 1.94 20 1 CG B ASP 78 ? ? SD D MET 1 ? ? 1.96 21 1 N B ASP 78 ? ? CE D MET 1 ? ? 1.98 22 1 OP2 A U 2710 ? ? NH2 C ARG 7 ? ? 1.99 23 1 OD1 B ASP 78 ? ? CE D MET 1 ? ? 2.03 24 1 CB B ASP 78 ? ? SD D MET 1 ? ? 2.05 25 1 NE2 B GLN 75 ? ? CB D SER 26 ? ? 2.08 26 1 C B SER 102 ? ? O C GLY 129 ? ? 2.08 27 1 NH2 B ARG 96 ? ? CE D MET 1 ? ? 2.11 28 1 "O2'" A C 2686 ? ? N C ALA 1 ? ? 2.13 29 1 CA B ASP 78 ? ? CE D MET 1 ? ? 2.13 30 1 CB B ASP 78 ? ? CB D MET 1 ? ? 2.15 31 1 CA B ALA 103 ? ? O C GLY 129 ? ? 2.16 32 1 CD B ARG 100 ? ? CB D ASP 25 ? ? 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB B TYR 202 ? ? CG B TYR 202 ? ? 1.420 1.512 -0.092 0.015 N 2 1 CD C PRO 100 ? ? N C PRO 100 ? ? 1.748 1.474 0.274 0.014 N 3 1 CA C PRO 100 ? ? C C PRO 100 ? ? 1.968 1.524 0.444 0.020 N 4 1 C C PRO 100 ? ? O C PRO 100 ? ? 0.993 1.228 -0.235 0.020 N 5 1 C C PRO 100 ? ? N C LYS 101 ? ? 1.502 1.336 0.166 0.023 Y 6 1 N C LYS 105 ? ? CA C LYS 105 ? ? 1.291 1.459 -0.168 0.020 N 7 1 N C GLY 106 ? ? CA C GLY 106 ? ? 1.333 1.456 -0.123 0.015 N 8 1 CA C SER 107 ? ? CB C SER 107 ? ? 1.647 1.525 0.122 0.015 N 9 1 N C ILE 109 ? ? CA C ILE 109 ? ? 1.320 1.459 -0.139 0.020 N 10 1 CA C ILE 109 ? ? CB C ILE 109 ? ? 1.402 1.544 -0.142 0.023 N 11 1 C C ILE 109 ? ? N C THR 110 ? ? 1.595 1.336 0.259 0.023 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N9 A G 2692 ? ? "C1'" A G 2692 ? ? "C2'" A G 2692 ? ? 127.06 114.00 13.06 1.30 N 2 1 "O4'" A G 2692 ? ? "C1'" A G 2692 ? ? N9 A G 2692 ? ? 113.22 108.50 4.72 0.70 N 3 1 CB C TRP 80 ? ? CA C TRP 80 ? ? C C TRP 80 ? ? 96.27 110.40 -14.13 2.00 N 4 1 N C PRO 100 ? ? CA C PRO 100 ? ? CB C PRO 100 ? ? 87.60 102.60 -15.00 1.10 N 5 1 CA C PRO 100 ? ? CB C PRO 100 ? ? CG C PRO 100 ? ? 126.35 104.80 21.55 1.90 N 6 1 CA C PRO 100 ? ? C C PRO 100 ? ? O C PRO 100 ? ? 45.97 120.20 -74.23 2.40 N 7 1 O C PRO 100 ? ? C C PRO 100 ? ? N C LYS 101 ? ? 64.83 122.70 -57.87 1.60 Y 8 1 CA C LYS 101 ? ? CB C LYS 101 ? ? CG C LYS 101 ? ? 97.86 113.40 -15.54 2.20 N 9 1 CD C LYS 101 ? ? CE C LYS 101 ? ? NZ C LYS 101 ? ? 132.65 111.70 20.95 2.30 N 10 1 CA C LYS 101 ? ? C C LYS 101 ? ? N C GLY 102 ? ? 134.74 116.20 18.54 2.00 Y 11 1 O C LYS 101 ? ? C C LYS 101 ? ? N C GLY 102 ? ? 85.65 123.20 -37.55 1.70 Y 12 1 C C GLY 102 ? ? N C GLU 103 ? ? CA C GLU 103 ? ? 136.94 121.70 15.24 2.50 Y 13 1 CB C GLU 103 ? ? CG C GLU 103 ? ? CD C GLU 103 ? ? 90.26 114.20 -23.94 2.70 N 14 1 OE1 C GLU 103 ? ? CD C GLU 103 ? ? OE2 C GLU 103 ? ? 132.80 123.30 9.50 1.20 N 15 1 CG C GLU 103 ? ? CD C GLU 103 ? ? OE1 C GLU 103 ? ? 93.87 118.30 -24.43 2.00 N 16 1 CG C GLU 103 ? ? CD C GLU 103 ? ? OE2 C GLU 103 ? ? 133.01 118.30 14.71 2.00 N 17 1 CA C GLU 103 ? ? C C GLU 103 ? ? O C GLU 103 ? ? 150.22 120.10 30.12 2.10 N 18 1 O C GLU 103 ? ? C C GLU 103 ? ? N C MET 104 ? ? 91.62 122.70 -31.08 1.60 Y 19 1 CB C MET 104 ? ? CG C MET 104 ? ? SD C MET 104 ? ? 85.81 112.40 -26.59 3.00 N 20 1 CG C MET 104 ? ? SD C MET 104 ? ? CE C MET 104 ? ? 87.98 100.20 -12.22 1.60 N 21 1 CA C MET 104 ? ? C C MET 104 ? ? N C LYS 105 ? ? 103.01 117.20 -14.19 2.20 Y 22 1 O C MET 104 ? ? C C MET 104 ? ? N C LYS 105 ? ? 133.07 122.70 10.37 1.60 Y 23 1 CA C LYS 105 ? ? CB C LYS 105 ? ? CG C LYS 105 ? ? 128.18 113.40 14.78 2.20 N 24 1 CA C LYS 105 ? ? C C LYS 105 ? ? O C LYS 105 ? ? 102.86 120.10 -17.24 2.10 N 25 1 CA C LYS 105 ? ? C C LYS 105 ? ? N C GLY 106 ? ? 103.98 116.20 -12.22 2.00 Y 26 1 O C LYS 105 ? ? C C LYS 105 ? ? N C GLY 106 ? ? 147.30 123.20 24.10 1.70 Y 27 1 N C GLY 106 ? ? CA C GLY 106 ? ? C C GLY 106 ? ? 91.38 113.10 -21.72 2.50 N 28 1 N C SER 107 ? ? CA C SER 107 ? ? CB C SER 107 ? ? 129.35 110.50 18.85 1.50 N 29 1 CA C ALA 108 ? ? C C ALA 108 ? ? O C ALA 108 ? ? 91.11 120.10 -28.99 2.10 N 30 1 O C ALA 108 ? ? C C ALA 108 ? ? N C ILE 109 ? ? 142.55 122.70 19.85 1.60 Y 31 1 CB C ILE 109 ? ? CA C ILE 109 ? ? C C ILE 109 ? ? 132.46 111.60 20.86 2.00 N 32 1 N C ILE 109 ? ? CA C ILE 109 ? ? CB C ILE 109 ? ? 86.84 110.80 -23.96 2.30 N 33 1 CG1 C ILE 109 ? ? CB C ILE 109 ? ? CG2 C ILE 109 ? ? 82.27 111.40 -29.13 2.20 N 34 1 CA C ILE 109 ? ? CB C ILE 109 ? ? CG1 C ILE 109 ? ? 125.76 111.00 14.76 1.90 N 35 1 CA C ILE 109 ? ? CB C ILE 109 ? ? CG2 C ILE 109 ? ? 125.93 110.90 15.03 2.00 N 36 1 N C ILE 109 ? ? CA C ILE 109 ? ? C C ILE 109 ? ? 130.87 111.00 19.87 2.70 N 37 1 CA C ILE 109 ? ? C C ILE 109 ? ? O C ILE 109 ? ? 135.20 120.10 15.10 2.10 N 38 1 CA C ILE 109 ? ? C C ILE 109 ? ? N C THR 110 ? ? 62.82 117.20 -54.38 2.20 Y 39 1 C C ILE 109 ? ? N C THR 110 ? ? CA C THR 110 ? ? 76.71 121.70 -44.99 2.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU B 8 ? ? 66.04 -120.16 2 1 ILE B 58 ? ? -88.56 48.88 3 1 GLN B 75 ? ? -61.92 3.56 4 1 SER B 102 ? ? -172.62 -168.21 5 1 ARG B 188 ? ? 62.91 61.47 6 1 LYS C 5 ? ? 83.32 7.76 7 1 ASP C 22 ? ? -121.62 -167.06 8 1 SER C 37 ? ? 167.98 -39.25 9 1 ARG C 40 ? ? -80.65 -72.35 10 1 LYS C 101 ? ? -30.26 -84.31 11 1 LYS C 105 ? ? -46.35 -75.94 12 1 ALA C 108 ? ? -170.99 132.75 13 1 PHE D 8 ? ? -107.03 -82.35 14 1 ARG D 43 ? ? 78.19 30.21 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 PRO C 100 ? ? LYS C 101 ? ? 149.04 2 1 GLU C 103 ? ? MET C 104 ? ? 146.82 3 1 LYS C 105 ? ? GLY C 106 ? ? 148.23 4 1 ALA C 108 ? ? ILE C 109 ? ? 128.74 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 VAL C 34 ? ? 10.32 2 1 LYS C 101 ? ? -21.06 3 1 GLU C 103 ? ? -11.00 4 1 LYS C 105 ? ? 11.39 5 1 ILE C 109 ? ? 21.25 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 "C1'" ? A G 2692 ? 'WRONG HAND' . 2 1 CB ? C ILE 109 ? 'WRONG HAND' . # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 C _pdbx_validate_polymer_linkage.auth_comp_id_1 ASN _pdbx_validate_polymer_linkage.auth_seq_id_1 99 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 C _pdbx_validate_polymer_linkage.auth_comp_id_2 PRO _pdbx_validate_polymer_linkage.auth_seq_id_2 100 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 2.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A U 2711 ? C5 ? A U 28 C5 2 1 Y 1 A U 2711 ? C6 ? A U 28 C6 # _em_ctf_correction.id 1 _em_ctf_correction.details 'DEFOCUS GROUP VOLUMES' _em_ctf_correction.type ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image 20 _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_software.id 1 _em_software.name SPIDER _em_software.version ? _em_software.category RECONSTRUCTION _em_software.details ? _em_software.image_processing_id 1 _em_software.imaging_id ? _em_software.fitting_id ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES _em_specimen.details ? # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2X7N 'double helix' 2X7N 'a-form double helix' 2X7N tetraloop 2X7N 'bulge loop' 2X7N 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A A 1 1_555 A U 27 1_555 0.292 -0.119 -0.213 0.029 -8.394 -2.383 1 A_A2684:U2710_A A 2684 ? A 2710 ? 20 1 1 A C 2 1_555 A G 26 1_555 0.374 -0.162 -0.284 3.523 -7.183 -0.298 2 A_C2685:G2709_A A 2685 ? A 2709 ? 19 1 1 A C 3 1_555 A G 25 1_555 0.379 -0.051 -0.093 6.271 -6.509 0.125 3 A_C2686:G2708_A A 2686 ? A 2708 ? 19 1 1 A G 4 1_555 A C 24 1_555 -0.514 -0.259 -0.190 -3.474 -9.668 1.136 4 A_G2687:C2707_A A 2687 ? A 2707 ? 19 1 1 A U 5 1_555 A A 23 1_555 0.230 -0.232 -0.421 7.951 -7.873 -4.531 5 A_U2688:A2706_A A 2688 ? A 2706 ? 20 1 1 A A 6 1_555 A U 22 1_555 0.773 -0.155 0.107 2.859 -3.756 4.547 6 A_A2689:U2705_A A 2689 ? A 2705 ? 20 1 1 A U 7 1_555 A C 21 1_555 7.084 -4.824 -0.085 -4.141 -1.883 -9.720 7 A_U2690:C2704_A A 2690 ? A 2704 ? ? 6 1 A A 8 1_555 A A 20 1_555 -5.945 5.040 -0.016 -19.440 -2.787 -174.700 8 A_A2691:A2703_A A 2691 ? A 2703 ? 2 8 1 A U 10 1_555 A A 19 1_555 4.256 -2.343 -1.181 12.753 -14.317 -92.374 9 A_U2693:A2702_A A 2693 ? A 2702 ? 24 4 1 A A 11 1_555 A G 18 1_555 -6.881 -4.602 0.520 8.481 -6.207 -8.957 10 A_A2694:G2701_A A 2694 ? A 2701 ? 11 10 1 A C 12 1_555 A G 17 1_555 0.027 -0.110 0.292 6.867 6.363 2.862 11 A_C2695:G2700_A A 2695 ? A 2700 ? 19 1 1 A G 13 1_555 A A 16 1_555 6.983 -5.445 1.116 13.741 2.075 -10.443 12 A_G2696:A2699_A A 2696 ? A 2699 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A A 1 1_555 A U 27 1_555 A C 2 1_555 A G 26 1_555 0.294 -1.664 3.372 1.244 -3.141 33.279 -2.344 -0.294 3.518 -5.467 -2.166 33.445 1 AA_A2684C2685:G2709U2710_AA A 2684 ? A 2710 ? A 2685 ? A 2709 ? 1 A C 2 1_555 A G 26 1_555 A C 3 1_555 A G 25 1_555 -0.727 -1.806 3.263 -2.867 3.013 28.931 -4.222 0.830 3.119 5.992 5.702 29.222 2 AA_C2685C2686:G2708G2709_AA A 2685 ? A 2709 ? A 2686 ? A 2708 ? 1 A C 3 1_555 A G 25 1_555 A G 4 1_555 A C 24 1_555 0.478 -1.745 3.518 -0.693 7.577 28.926 -4.966 -1.071 2.963 14.847 1.358 29.889 3 AA_C2686G2687:C2707G2708_AA A 2686 ? A 2708 ? A 2687 ? A 2707 ? 1 A G 4 1_555 A C 24 1_555 A U 5 1_555 A A 23 1_555 -0.659 -1.696 3.101 1.853 -0.444 33.361 -2.881 1.436 3.083 -0.772 -3.225 33.414 4 AA_G2687U2688:A2706C2707_AA A 2687 ? A 2707 ? A 2688 ? A 2706 ? 1 A U 5 1_555 A A 23 1_555 A A 6 1_555 A U 22 1_555 0.587 -1.437 3.368 -0.478 12.048 34.491 -3.896 -1.001 2.723 19.593 0.778 36.478 5 AA_U2688A2689:U2705A2706_AA A 2688 ? A 2706 ? A 2689 ? A 2705 ? 1 A A 6 1_555 A U 22 1_555 A U 7 1_555 A C 21 1_555 -0.488 -0.797 3.923 8.705 13.508 54.761 -1.710 1.075 3.544 14.343 -9.243 56.894 6 AA_A2689U2690:C2704U2705_AA A 2689 ? A 2705 ? A 2690 ? A 2704 ? 1 A U 7 1_555 A C 21 1_555 A A 8 1_555 A A 20 1_555 3.544 -0.790 -1.387 -89.054 -143.586 -38.336 0.180 1.914 0.672 74.940 -46.478 -169.574 7 AA_U2690A2691:A2703C2704_AA A 2690 ? A 2704 ? A 2691 ? A 2703 ? 1 A A 8 1_555 A A 20 1_555 A U 10 1_555 A A 19 1_555 1.807 -2.368 0.343 120.062 117.946 -83.686 1.055 1.041 0.504 -60.332 61.415 -171.294 8 AA_A2691U2693:A2702A2703_AA A 2691 ? A 2703 ? A 2693 ? A 2702 ? 1 A U 10 1_555 A A 19 1_555 A A 11 1_555 A G 18 1_555 4.793 -0.844 3.318 -0.066 4.419 -9.873 -3.117 25.315 3.403 -24.151 -0.361 -10.815 9 AA_U2693A2694:G2701A2702_AA A 2693 ? A 2702 ? A 2694 ? A 2701 ? 1 A A 11 1_555 A G 18 1_555 A C 12 1_555 A G 17 1_555 0.686 -0.922 3.431 -4.347 14.544 66.570 -1.385 -0.781 3.150 13.076 3.908 68.084 10 AA_A2694C2695:G2700G2701_AA A 2694 ? A 2701 ? A 2695 ? A 2700 ? 1 A C 12 1_555 A G 17 1_555 A G 13 1_555 A A 16 1_555 -1.798 -1.131 3.024 0.529 12.414 50.523 -2.029 2.085 2.678 14.298 -0.609 51.931 11 AA_C2695G2696:A2699G2700_AA A 2695 ? A 2700 ? A 2696 ? A 2699 ? #