HEADER VIRAL PROTEIN 15-MAR-10 2X9A TITLE CRYSTAL STRUCTURE OF G3P FROM PHAGE IF1 IN COMPLEX WITH ITS TITLE 2 CORECEPTOR, THE C-TERMINAL DOMAIN OF TOLA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATTACHMENT PROTEIN G3P; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: TOLA-BINDING DOMAIN, RESIDUES 17-81; COMPND 5 SYNONYM: GENE 3 PROTEIN, MINOR COAT PROTEIN, G3P, IF1-N1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MEMBRANE SPANNING PROTEIN, REQUIRED FOR OUTER MEMBRANE COMPND 9 INTEGRITY; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: C-TERMINAL DOMAIN, RESIDUES 268-394; COMPND 12 SYNONYM: MEMBRANE SPANNING PROTEIN TOLA, TOLA; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE IF1; SOURCE 3 ORGANISM_TAXID: 10868; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET11A; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 562; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS TRANSMEMBRANE, PHAGE INFECTION, PHAGE RECOGNITION, HOST-VIRUS KEYWDS 2 INTERACTION, VIRION, VIRAL PROTEIN, HOST MEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.LORENZ,R.P.JAKOB,H.DOBBEK,F.X.SCHMID REVDAT 5 20-DEC-23 2X9A 1 REMARK REVDAT 4 04-APR-18 2X9A 1 REMARK REVDAT 3 16-FEB-11 2X9A 1 JRNL REMARK REVDAT 2 08-DEC-10 2X9A 1 JRNL REVDAT 1 01-DEC-10 2X9A 0 JRNL AUTH S.H.LORENZ,R.P.JAKOB,U.WEININGER,J.BALBACH,H.DOBBEK, JRNL AUTH 2 F.X.SCHMID JRNL TITL THE FILAMENTOUS PHAGES FD AND IF1 USE DIFFERENT MECHANISMS JRNL TITL 2 TO INFECT ESCHERICHIA COLI. JRNL REF J.MOL.BIOL. V. 405 989 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21110981 JRNL DOI 10.1016/J.JMB.2010.11.030 REMARK 2 REMARK 2 RESOLUTION. 2.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 15404 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.2200 - 4.2217 0.99 2961 156 0.1598 0.1976 REMARK 3 2 4.2217 - 3.3521 0.98 2930 154 0.1613 0.2015 REMARK 3 3 3.3521 - 2.9287 0.98 2954 155 0.2039 0.2557 REMARK 3 4 2.9287 - 2.6610 0.98 2940 155 0.2266 0.3220 REMARK 3 5 2.6610 - 2.4704 0.95 2849 150 0.2479 0.3027 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 47.50 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.11520 REMARK 3 B22 (A**2) : -1.11520 REMARK 3 B33 (A**2) : 2.23030 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2338 REMARK 3 ANGLE : 1.032 3170 REMARK 3 CHIRALITY : 0.071 340 REMARK 3 PLANARITY : 0.004 416 REMARK 3 DIHEDRAL : 19.700 826 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:62) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5017 -2.7682 1.5230 REMARK 3 T TENSOR REMARK 3 T11: 0.3200 T22: 0.3629 REMARK 3 T33: 0.2985 T12: 0.0380 REMARK 3 T13: 0.0036 T23: -0.1504 REMARK 3 L TENSOR REMARK 3 L11: 3.4482 L22: 3.1930 REMARK 3 L33: 4.5245 L12: -0.8988 REMARK 3 L13: -2.5671 L23: -0.0248 REMARK 3 S TENSOR REMARK 3 S11: 0.0432 S12: -0.0064 S13: 0.2183 REMARK 3 S21: 0.2712 S22: -0.3897 S23: 0.2696 REMARK 3 S31: -0.0338 S32: -0.5415 S33: 0.3134 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 332:421) REMARK 3 ORIGIN FOR THE GROUP (A): 37.4665 -15.1315 -1.8124 REMARK 3 T TENSOR REMARK 3 T11: 0.3038 T22: 0.2614 REMARK 3 T33: 0.3329 T12: 0.1220 REMARK 3 T13: -0.0002 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 3.7743 L22: 5.1476 REMARK 3 L33: 5.9759 L12: -1.8326 REMARK 3 L13: -0.5975 L23: 2.1753 REMARK 3 S TENSOR REMARK 3 S11: 0.0069 S12: -0.0404 S13: -0.2779 REMARK 3 S21: 0.3630 S22: -0.1269 S23: -0.2749 REMARK 3 S31: 0.3644 S32: 0.2323 S33: 0.0956 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN C AND RESID 2:62) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1369 -8.2940 -23.4104 REMARK 3 T TENSOR REMARK 3 T11: 0.3365 T22: 0.3594 REMARK 3 T33: 0.3463 T12: 0.0247 REMARK 3 T13: 0.1573 T23: 0.0643 REMARK 3 L TENSOR REMARK 3 L11: 3.3152 L22: 2.4208 REMARK 3 L33: 3.8393 L12: -1.8798 REMARK 3 L13: -0.7573 L23: 1.0622 REMARK 3 S TENSOR REMARK 3 S11: -0.3341 S12: 0.1239 S13: 0.0437 REMARK 3 S21: -0.2782 S22: -0.0776 S23: -0.2222 REMARK 3 S31: 0.5402 S32: 0.1372 S33: 0.3415 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN D AND RESID 332:421) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4132 -2.3528 -20.0899 REMARK 3 T TENSOR REMARK 3 T11: 0.1839 T22: 0.4457 REMARK 3 T33: 0.3800 T12: 0.0162 REMARK 3 T13: -0.0281 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 4.0385 L22: 3.2898 REMARK 3 L33: 5.0213 L12: -0.8998 REMARK 3 L13: -1.9047 L23: 1.0839 REMARK 3 S TENSOR REMARK 3 S11: -0.1806 S12: 0.0671 S13: -0.0436 REMARK 3 S21: -0.0940 S22: 0.1126 S23: 0.3251 REMARK 3 S31: -0.0014 S32: -0.4109 S33: 0.1072 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2X9A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1290042661. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.914 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15411 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.470 REMARK 200 RESOLUTION RANGE LOW (A) : 32.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 4.250 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.15 REMARK 200 R MERGE FOR SHELL (I) : 0.65000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.170 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1TOL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE, 20 % PEG3350, 5 REMARK 280 % MPD, PH 4.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.25750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.28413 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.03700 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 47.25750 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 27.28413 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.03700 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 47.25750 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 27.28413 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.03700 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.56826 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 88.07400 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 54.56826 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 88.07400 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 54.56826 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 88.07400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLY A 63 REMARK 465 SER A 64 REMARK 465 GLY A 65 REMARK 465 ASP B 294 REMARK 465 ASP B 295 REMARK 465 ILE B 296 REMARK 465 PHE B 297 REMARK 465 GLY B 298 REMARK 465 GLU B 299 REMARK 465 LEU B 300 REMARK 465 SER B 301 REMARK 465 SER B 302 REMARK 465 GLY B 303 REMARK 465 LYS B 304 REMARK 465 ASN B 305 REMARK 465 ALA B 306 REMARK 465 PRO B 307 REMARK 465 LYS B 308 REMARK 465 THR B 309 REMARK 465 GLY B 310 REMARK 465 GLY B 311 REMARK 465 GLY B 312 REMARK 465 ALA B 313 REMARK 465 LYS B 314 REMARK 465 GLY B 315 REMARK 465 ASN B 316 REMARK 465 ASN B 317 REMARK 465 ALA B 318 REMARK 465 SER B 319 REMARK 465 PRO B 320 REMARK 465 ALA B 321 REMARK 465 GLY B 322 REMARK 465 SER B 323 REMARK 465 GLY B 324 REMARK 465 ASN B 325 REMARK 465 THR B 326 REMARK 465 LYS B 327 REMARK 465 ASN B 328 REMARK 465 ASN B 329 REMARK 465 GLY B 330 REMARK 465 ALA B 331 REMARK 465 ALA B 422 REMARK 465 ALA B 423 REMARK 465 HIS B 424 REMARK 465 HIS B 425 REMARK 465 HIS B 426 REMARK 465 HIS B 427 REMARK 465 HIS B 428 REMARK 465 HIS B 429 REMARK 465 ALA C 1 REMARK 465 GLY C 63 REMARK 465 SER C 64 REMARK 465 GLY C 65 REMARK 465 ASP D 294 REMARK 465 ASP D 295 REMARK 465 ILE D 296 REMARK 465 PHE D 297 REMARK 465 GLY D 298 REMARK 465 GLU D 299 REMARK 465 LEU D 300 REMARK 465 SER D 301 REMARK 465 SER D 302 REMARK 465 GLY D 303 REMARK 465 LYS D 304 REMARK 465 ASN D 305 REMARK 465 ALA D 306 REMARK 465 PRO D 307 REMARK 465 LYS D 308 REMARK 465 THR D 309 REMARK 465 GLY D 310 REMARK 465 GLY D 311 REMARK 465 GLY D 312 REMARK 465 ALA D 313 REMARK 465 LYS D 314 REMARK 465 GLY D 315 REMARK 465 ASN D 316 REMARK 465 ASN D 317 REMARK 465 ALA D 318 REMARK 465 SER D 319 REMARK 465 PRO D 320 REMARK 465 ALA D 321 REMARK 465 GLY D 322 REMARK 465 SER D 323 REMARK 465 GLY D 324 REMARK 465 ASN D 325 REMARK 465 THR D 326 REMARK 465 LYS D 327 REMARK 465 ASN D 328 REMARK 465 ASN D 329 REMARK 465 GLY D 330 REMARK 465 ALA D 331 REMARK 465 ALA D 422 REMARK 465 ALA D 423 REMARK 465 HIS D 424 REMARK 465 HIS D 425 REMARK 465 HIS D 426 REMARK 465 HIS D 427 REMARK 465 HIS D 428 REMARK 465 HIS D 429 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 33 19.04 56.11 REMARK 500 TYR A 45 -169.76 -162.75 REMARK 500 ASP B 353 42.46 -96.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X9B RELATED DB: PDB REMARK 900 THE FILAMENTOUS PHAGES FD AND IF1 USE DIFFERENT INFECTION MECHANISMS DBREF 2X9A A 1 65 UNP O80297 G3P_BPIF1 17 81 DBREF 2X9A B 294 420 UNP Q8X965 Q8X965_ECO57 268 394 DBREF 2X9A C 1 65 UNP O80297 G3P_BPIF1 17 81 DBREF 2X9A D 294 420 UNP Q8X965 Q8X965_ECO57 268 394 SEQADV 2X9A TRP A 51 UNP O80297 CYS 67 CONFLICT SEQADV 2X9A ALA B 421 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A ALA B 422 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A ALA B 423 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS B 424 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS B 425 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS B 426 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS B 427 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS B 428 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS B 429 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A TRP C 51 UNP O80297 CYS 67 CONFLICT SEQADV 2X9A ALA D 421 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A ALA D 422 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A ALA D 423 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS D 424 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS D 425 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS D 426 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS D 427 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS D 428 UNP Q8X965 EXPRESSION TAG SEQADV 2X9A HIS D 429 UNP Q8X965 EXPRESSION TAG SEQRES 1 A 65 ALA THR THR ASP ALA GLU CYS LEU SER LYS PRO ALA PHE SEQRES 2 A 65 ASP GLY THR LEU SER ASN VAL TRP LYS GLU GLY ASP SER SEQRES 3 A 65 ARG TYR ALA ASN PHE GLU ASN CYS ILE TYR GLU LEU SER SEQRES 4 A 65 GLY ILE GLY ILE GLY TYR ASP ASN ASP THR SER TRP ASN SEQRES 5 A 65 GLY HIS TRP THR PRO VAL ARG ALA ALA ASP GLY SER GLY SEQRES 1 B 136 ASP ASP ILE PHE GLY GLU LEU SER SER GLY LYS ASN ALA SEQRES 2 B 136 PRO LYS THR GLY GLY GLY ALA LYS GLY ASN ASN ALA SER SEQRES 3 B 136 PRO ALA GLY SER GLY ASN THR LYS ASN ASN GLY ALA SER SEQRES 4 B 136 GLY ALA ASP ILE ASN ASN TYR ALA GLY GLN ILE LYS SER SEQRES 5 B 136 ALA ILE GLU SER LYS PHE TYR ASP ALA SER SER TYR ALA SEQRES 6 B 136 GLY LYS THR CYS THR LEU ARG ILE LYS LEU ALA PRO ASP SEQRES 7 B 136 GLY MET LEU LEU ASP ILE LYS PRO GLU GLY GLY ASP PRO SEQRES 8 B 136 ALA LEU CYS GLN ALA ALA LEU ALA ALA ALA LYS LEU ALA SEQRES 9 B 136 LYS ILE PRO LYS PRO PRO SER GLN ALA VAL TYR GLU VAL SEQRES 10 B 136 PHE LYS ASN ALA PRO LEU ASP PHE LYS PRO ALA ALA ALA SEQRES 11 B 136 HIS HIS HIS HIS HIS HIS SEQRES 1 C 65 ALA THR THR ASP ALA GLU CYS LEU SER LYS PRO ALA PHE SEQRES 2 C 65 ASP GLY THR LEU SER ASN VAL TRP LYS GLU GLY ASP SER SEQRES 3 C 65 ARG TYR ALA ASN PHE GLU ASN CYS ILE TYR GLU LEU SER SEQRES 4 C 65 GLY ILE GLY ILE GLY TYR ASP ASN ASP THR SER TRP ASN SEQRES 5 C 65 GLY HIS TRP THR PRO VAL ARG ALA ALA ASP GLY SER GLY SEQRES 1 D 136 ASP ASP ILE PHE GLY GLU LEU SER SER GLY LYS ASN ALA SEQRES 2 D 136 PRO LYS THR GLY GLY GLY ALA LYS GLY ASN ASN ALA SER SEQRES 3 D 136 PRO ALA GLY SER GLY ASN THR LYS ASN ASN GLY ALA SER SEQRES 4 D 136 GLY ALA ASP ILE ASN ASN TYR ALA GLY GLN ILE LYS SER SEQRES 5 D 136 ALA ILE GLU SER LYS PHE TYR ASP ALA SER SER TYR ALA SEQRES 6 D 136 GLY LYS THR CYS THR LEU ARG ILE LYS LEU ALA PRO ASP SEQRES 7 D 136 GLY MET LEU LEU ASP ILE LYS PRO GLU GLY GLY ASP PRO SEQRES 8 D 136 ALA LEU CYS GLN ALA ALA LEU ALA ALA ALA LYS LEU ALA SEQRES 9 D 136 LYS ILE PRO LYS PRO PRO SER GLN ALA VAL TYR GLU VAL SEQRES 10 D 136 PHE LYS ASN ALA PRO LEU ASP PHE LYS PRO ALA ALA ALA SEQRES 11 D 136 HIS HIS HIS HIS HIS HIS FORMUL 5 HOH *58(H2 O) HELIX 1 1 THR A 3 SER A 9 1 7 HELIX 2 2 SER B 332 SER B 349 1 18 HELIX 3 3 ASP B 353 ALA B 358 5 6 HELIX 4 4 ASP B 383 ALA B 397 1 15 HELIX 5 5 SER B 404 LYS B 412 1 9 HELIX 6 6 THR C 3 SER C 9 1 7 HELIX 7 7 SER D 332 SER D 349 1 18 HELIX 8 8 ASP D 353 ALA D 358 5 6 HELIX 9 9 ASP D 383 ALA D 397 1 15 HELIX 10 10 SER D 404 LYS D 412 1 9 SHEET 1 AA 6 PHE A 13 SER A 18 0 SHEET 2 AA 6 SER A 50 ALA A 60 -1 O TRP A 51 N LEU A 17 SHEET 3 AA 6 CYS A 34 TYR A 45 -1 O ILE A 35 N VAL A 58 SHEET 4 AA 6 PRO B 415 LYS B 419 -1 O PRO B 415 N GLY A 44 SHEET 5 AA 6 CYS B 362 LEU B 368 -1 O CYS B 362 N PHE B 418 SHEET 6 AA 6 LEU B 374 GLY B 382 -1 N LEU B 375 O LYS B 367 SHEET 1 AB 5 PHE A 13 SER A 18 0 SHEET 2 AB 5 SER A 50 ALA A 60 -1 O TRP A 51 N LEU A 17 SHEET 3 AB 5 CYS A 34 TYR A 45 -1 O ILE A 35 N VAL A 58 SHEET 4 AB 5 SER A 26 PHE A 31 -1 O ARG A 27 N LEU A 38 SHEET 5 AB 5 TRP A 21 GLU A 23 1 O TRP A 21 N TYR A 28 SHEET 1 CA 6 PHE C 13 LEU C 17 0 SHEET 2 CA 6 SER C 50 ALA C 60 -1 O TRP C 51 N LEU C 17 SHEET 3 CA 6 CYS C 34 TYR C 45 -1 O ILE C 35 N VAL C 58 SHEET 4 CA 6 PRO D 415 LYS D 419 -1 O PRO D 415 N GLY C 44 SHEET 5 CA 6 CYS D 362 LEU D 368 -1 O CYS D 362 N PHE D 418 SHEET 6 CA 6 LEU D 374 GLY D 382 -1 N LEU D 375 O LYS D 367 SHEET 1 CB 5 PHE C 13 LEU C 17 0 SHEET 2 CB 5 SER C 50 ALA C 60 -1 O TRP C 51 N LEU C 17 SHEET 3 CB 5 CYS C 34 TYR C 45 -1 O ILE C 35 N VAL C 58 SHEET 4 CB 5 SER C 26 PHE C 31 -1 O ARG C 27 N LEU C 38 SHEET 5 CB 5 TRP C 21 GLU C 23 1 O TRP C 21 N TYR C 28 SSBOND 1 CYS A 7 CYS A 34 1555 1555 2.03 SSBOND 2 CYS B 362 CYS B 387 1555 1555 2.03 SSBOND 3 CYS C 7 CYS C 34 1555 1555 2.04 SSBOND 4 CYS D 362 CYS D 387 1555 1555 2.03 CRYST1 94.515 94.515 132.111 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010580 0.006109 0.000000 0.00000 SCALE2 0.000000 0.012217 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007569 0.00000