HEADER CELL ADHESION 25-MAR-10 2X9W TITLE STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL WALL SURFACE ANCHOR FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BACKBONE SUBUNIT PILI, RESIDUES 184-627; COMPND 5 SYNONYM: RRGB; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: ISOPEPTIDE-BOND LINKS N318 AND K193, N428 AND K349, COMPND 9 N623 AND K453 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR G.SPRAGGON,E.KOESEMA,M.SCARSELLI,E.MALITO,M.BIAGINI,N.NORAIS,C.EMOLO, AUTHOR 2 M.A.BAROCCHI,F.GIUSTI,M.HILLERINGMANN,R.RAPPUOLI,S.LESLEY,A.COVACCI, AUTHOR 3 V.MASIGNANI,I.FERLENGHI REVDAT 2 30-OCT-19 2X9W 1 REMARK LINK REVDAT 1 30-JUN-10 2X9W 0 JRNL AUTH G.SPRAGGON,E.KOESEMA,M.SCARSELLI,E.MALITO,M.BIAGINI, JRNL AUTH 2 N.NORAIS,C.EMOLO,M.A.BAROCCHI,F.GIUSTI,M.HILLERINGMANN, JRNL AUTH 3 R.RAPPUOLI,S.LESLEY,A.COVACCI,V.MASIGNANI,I.FERLENGHI JRNL TITL SUPRAMOLECULAR ORGANIZATION OF THE REPETITIVE BACKBONE UNIT JRNL TITL 2 OF THE STREPTOCOCCUS PNEUMONIAE PILUS. JRNL REF PLOS ONE V. 5 919 2010 JRNL REFN ESSN 1932-6203 JRNL PMID 20559564 JRNL DOI 10.1371/JOURNAL.PONE.0010919 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.140 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 40524 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3579 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.9891 - 5.6789 1.00 2807 149 0.1936 0.2158 REMARK 3 2 5.6789 - 4.5089 1.00 2829 136 0.1658 0.1947 REMARK 3 3 4.5089 - 3.9393 0.99 2832 117 0.1474 0.2235 REMARK 3 4 3.9393 - 3.5793 0.99 2784 144 0.1553 0.2168 REMARK 3 5 3.5793 - 3.3228 0.98 2806 142 0.1437 0.1859 REMARK 3 6 3.3228 - 3.1270 0.99 2767 151 0.1505 0.1811 REMARK 3 7 3.1270 - 2.9704 0.98 2766 142 0.1596 0.2164 REMARK 3 8 2.9704 - 2.8411 0.97 2721 154 0.1605 0.2440 REMARK 3 9 2.8411 - 2.7318 0.97 2767 135 0.1644 0.2213 REMARK 3 10 2.7318 - 2.6375 0.96 2687 163 0.1642 0.2720 REMARK 3 11 2.6375 - 2.5550 0.96 2741 143 0.1628 0.2154 REMARK 3 12 2.5550 - 2.4820 0.95 2646 175 0.1633 0.2013 REMARK 3 13 2.4820 - 2.4167 0.94 2652 140 0.1670 0.2522 REMARK 3 14 2.4167 - 2.3577 0.95 2695 145 0.1709 0.2395 REMARK 3 15 2.3577 - 2.3041 0.95 2668 136 0.1664 0.2187 REMARK 3 16 2.3041 - 2.2551 0.85 2375 131 0.1877 0.2689 REMARK 3 17 2.2551 - 2.2100 0.87 2466 139 0.2263 0.2780 REMARK 3 18 2.2100 - 2.1683 0.92 2550 153 0.1942 0.2842 REMARK 3 19 2.1683 - 2.1296 0.92 2562 162 0.1762 0.2119 REMARK 3 20 2.1296 - 2.0935 0.91 2598 153 0.1781 0.2033 REMARK 3 21 2.0935 - 2.0597 0.88 2485 116 0.1992 0.2223 REMARK 3 22 2.0597 - 2.0280 0.82 2348 113 0.1831 0.2552 REMARK 3 23 2.0280 - 1.9982 0.83 2313 132 0.2291 0.2755 REMARK 3 24 1.9982 - 1.9700 0.79 2223 126 0.2505 0.2622 REMARK 3 25 1.9700 - 1.9434 0.77 2198 104 0.2737 0.2906 REMARK 3 26 1.9434 - 1.9182 0.62 1747 78 0.3212 0.3034 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 49.66 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.59490 REMARK 3 B22 (A**2) : 2.95590 REMARK 3 B33 (A**2) : -2.80330 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3464 REMARK 3 ANGLE : 1.294 4707 REMARK 3 CHIRALITY : 0.084 546 REMARK 3 PLANARITY : 0.005 618 REMARK 3 DIHEDRAL : 16.866 1253 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 186:326 REMARK 3 ORIGIN FOR THE GROUP (A): 58.5611 47.5885 33.9546 REMARK 3 T TENSOR REMARK 3 T11: 0.1736 T22: 0.1405 REMARK 3 T33: 0.1593 T12: 0.0064 REMARK 3 T13: -0.0077 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.8428 L22: 0.5207 REMARK 3 L33: 1.1595 L12: -0.2131 REMARK 3 L13: 0.5720 L23: -0.5484 REMARK 3 S TENSOR REMARK 3 S11: -0.0545 S12: 0.0188 S13: 0.0086 REMARK 3 S21: 0.0326 S22: -0.0042 S23: 0.0445 REMARK 3 S31: -0.1272 S32: 0.0478 S33: 0.0476 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 327:445 REMARK 3 ORIGIN FOR THE GROUP (A): 55.3528 56.3941 51.7073 REMARK 3 T TENSOR REMARK 3 T11: 0.2679 T22: 0.2656 REMARK 3 T33: 0.1792 T12: 0.0708 REMARK 3 T13: -0.0093 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 1.1895 L22: 2.6980 REMARK 3 L33: 0.1488 L12: -0.2517 REMARK 3 L13: 0.0025 L23: 1.1252 REMARK 3 S TENSOR REMARK 3 S11: -0.1788 S12: -0.4097 S13: 0.1563 REMARK 3 S21: 0.2953 S22: 0.1248 S23: 0.1324 REMARK 3 S31: -0.0368 S32: -0.0431 S33: 0.0609 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 446:627 REMARK 3 ORIGIN FOR THE GROUP (A): 70.3426 17.3566 57.8791 REMARK 3 T TENSOR REMARK 3 T11: 0.1078 T22: 0.1489 REMARK 3 T33: 0.1268 T12: 0.0087 REMARK 3 T13: -0.0111 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 1.2365 L22: 1.2035 REMARK 3 L33: 0.8179 L12: -0.2923 REMARK 3 L13: -0.0376 L23: -0.3094 REMARK 3 S TENSOR REMARK 3 S11: -0.0188 S12: -0.0834 S13: 0.0079 REMARK 3 S21: 0.0611 S22: -0.0722 S23: -0.0977 REMARK 3 S31: 0.0126 S32: 0.1810 S33: 0.0878 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THIS MODEL WAS REFINED WITH THE REMARK 3 ANOMALOUS DATA (F+ AND F-). REMARK 4 REMARK 4 2X9W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1290043407. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40524 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 44.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.93000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 0.05 REMARK 280 POTASSIUM DIHYDROGEN PHOSPHATE, 20% PEG-8000, PH 4.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.68000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.23050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.03150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.23050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.68000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.03150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, THR 374 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 184 REMARK 465 THR A 185 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 318 ND2 REMARK 470 LYS A 387 CG CD CE NZ REMARK 470 ASN A 428 ND2 REMARK 470 ASN A 623 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 349 CG ASN A 428 1.31 REMARK 500 NZ LYS A 193 CG ASN A 318 1.32 REMARK 500 NZ LYS A 453 CG ASN A 623 1.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 312 CB VAL A 312 CG2 0.148 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 312 CA - CB - CG2 ANGL. DEV. = -13.2 DEGREES REMARK 500 ARG A 480 NE - CZ - NH1 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 480 NE - CZ - NH2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 233 57.99 -141.34 REMARK 500 ALA A 474 -129.34 56.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1628 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1629 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1630 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X9Z RELATED DB: PDB REMARK 900 STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE REMARK 900 RELATED ID: 2X9Y RELATED DB: PDB REMARK 900 STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE REMARK 900 RELATED ID: 2X9X RELATED DB: PDB REMARK 900 STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE DBREF 2X9W A 184 627 UNP Q97SC2 Q97SC2_STRPN 184 627 SEQADV 2X9W ALA A 374 UNP Q97SC2 THR 374 ENGINEERED MUTATION SEQRES 1 A 444 ASN THR GLU ALA LYS PRO LYS ILE ASP LYS ASP PHE LYS SEQRES 2 A 444 GLY LYS ALA ASN PRO ASP THR PRO ARG VAL ASP LYS ASP SEQRES 3 A 444 THR PRO VAL ASN HIS GLN VAL GLY ASP VAL VAL GLU TYR SEQRES 4 A 444 GLU ILE VAL THR LYS ILE PRO ALA LEU ALA ASN TYR ALA SEQRES 5 A 444 THR ALA ASN TRP SER ASP ARG MSE THR GLU GLY LEU ALA SEQRES 6 A 444 PHE ASN LYS GLY THR VAL LYS VAL THR VAL ASP ASP VAL SEQRES 7 A 444 ALA LEU GLU ALA GLY ASP TYR ALA LEU THR GLU VAL ALA SEQRES 8 A 444 THR GLY PHE ASP LEU LYS LEU THR ASP ALA GLY LEU ALA SEQRES 9 A 444 LYS VAL ASN ASP GLN ASN ALA GLU LYS THR VAL LYS ILE SEQRES 10 A 444 THR TYR SER ALA THR LEU ASN ASP LYS ALA ILE VAL GLU SEQRES 11 A 444 VAL PRO GLU SER ASN ASP VAL THR PHE ASN TYR GLY ASN SEQRES 12 A 444 ASN PRO ASP HIS GLY ASN THR PRO LYS PRO ASN LYS PRO SEQRES 13 A 444 ASN GLU ASN GLY ASP LEU THR LEU THR LYS THR TRP VAL SEQRES 14 A 444 ASP ALA THR GLY ALA PRO ILE PRO ALA GLY ALA GLU ALA SEQRES 15 A 444 THR PHE ASP LEU VAL ASN ALA GLN ALA GLY LYS VAL VAL SEQRES 16 A 444 GLN THR VAL THR LEU THR THR ASP LYS ASN THR VAL THR SEQRES 17 A 444 VAL ASN GLY LEU ASP LYS ASN THR GLU TYR LYS PHE VAL SEQRES 18 A 444 GLU ARG SER ILE LYS GLY TYR SER ALA ASP TYR GLN GLU SEQRES 19 A 444 ILE THR THR ALA GLY GLU ILE ALA VAL LYS ASN TRP LYS SEQRES 20 A 444 ASP GLU ASN PRO LYS PRO LEU ASP PRO THR GLU PRO LYS SEQRES 21 A 444 VAL VAL THR TYR GLY LYS LYS PHE VAL LYS VAL ASN ASP SEQRES 22 A 444 LYS ASP ASN ARG LEU ALA GLY ALA GLU PHE VAL ILE ALA SEQRES 23 A 444 ASN ALA ASP ASN ALA GLY GLN TYR LEU ALA ARG LYS ALA SEQRES 24 A 444 ASP LYS VAL SER GLN GLU GLU LYS GLN LEU VAL VAL THR SEQRES 25 A 444 THR LYS ASP ALA LEU ASP ARG ALA VAL ALA ALA TYR ASN SEQRES 26 A 444 ALA LEU THR ALA GLN GLN GLN THR GLN GLN GLU LYS GLU SEQRES 27 A 444 LYS VAL ASP LYS ALA GLN ALA ALA TYR ASN ALA ALA VAL SEQRES 28 A 444 ILE ALA ALA ASN ASN ALA PHE GLU TRP VAL ALA ASP LYS SEQRES 29 A 444 ASP ASN GLU ASN VAL VAL LYS LEU VAL SER ASP ALA GLN SEQRES 30 A 444 GLY ARG PHE GLU ILE THR GLY LEU LEU ALA GLY THR TYR SEQRES 31 A 444 TYR LEU GLU GLU THR LYS GLN PRO ALA GLY TYR ALA LEU SEQRES 32 A 444 LEU THR SER ARG GLN LYS PHE GLU VAL THR ALA THR SER SEQRES 33 A 444 TYR SER ALA THR GLY GLN GLY ILE GLU TYR THR ALA GLY SEQRES 34 A 444 SER GLY LYS ASP ASP ALA THR LYS VAL VAL ASN LYS LYS SEQRES 35 A 444 ILE THR MODRES 2X9W MSE A 243 MET SELENOMETHIONINE HET MSE A 243 8 HET GOL A1628 6 HET GOL A1629 6 HET GOL A1630 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 HOH *290(H2 O) HELIX 1 1 GLU A 264 GLY A 266 5 3 HELIX 2 2 THR A 282 ASN A 290 1 9 HELIX 3 3 ALA A 482 VAL A 485 5 4 HELIX 4 4 SER A 486 ALA A 509 1 24 HELIX 5 5 THR A 511 GLN A 515 5 5 HELIX 6 6 THR A 516 ASN A 538 1 23 SHEET 1 AA 5 LYS A 190 PHE A 195 0 SHEET 2 AA 5 VAL A 219 ILE A 228 -1 O GLU A 223 N ASP A 194 SHEET 3 AA 5 LYS A 296 LEU A 306 -1 O LYS A 296 N ILE A 228 SHEET 4 AA 5 LYS A 255 VAL A 258 -1 O LYS A 255 N THR A 301 SHEET 5 AA 5 VAL A 261 ALA A 262 -1 O VAL A 261 N VAL A 258 SHEET 1 AB 4 LYS A 190 PHE A 195 0 SHEET 2 AB 4 VAL A 219 ILE A 228 -1 O GLU A 223 N ASP A 194 SHEET 3 AB 4 LYS A 296 LEU A 306 -1 O LYS A 296 N ILE A 228 SHEET 4 AB 4 LEU A 247 PHE A 249 -1 O ALA A 248 N THR A 305 SHEET 1 AC 6 VAL A 212 ASN A 213 0 SHEET 2 AC 6 LYS A 443 VAL A 445 1 O LYS A 443 N VAL A 212 SHEET 3 AC 6 GLU A 316 GLY A 325 -1 O GLU A 316 N VAL A 444 SHEET 4 AC 6 THR A 236 MSE A 243 -1 O THR A 236 N GLY A 325 SHEET 5 AC 6 GLY A 276 LEU A 281 -1 O PHE A 277 N ASP A 241 SHEET 6 AC 6 TYR A 268 VAL A 273 -1 O ALA A 269 N LYS A 280 SHEET 1 AD 4 THR A 389 VAL A 392 0 SHEET 2 AD 4 LEU A 345 ASP A 353 -1 O LEU A 345 N VAL A 392 SHEET 3 AD 4 GLU A 423 LYS A 430 1 O ILE A 424 N THR A 348 SHEET 4 AD 4 SER A 412 TYR A 415 -1 O SER A 412 N TRP A 429 SHEET 1 AE 3 LYS A 376 LEU A 383 0 SHEET 2 AE 3 ALA A 365 ASN A 371 -1 O ALA A 365 N LEU A 383 SHEET 3 AE 3 TYR A 401 GLU A 405 -1 O LYS A 402 N VAL A 370 SHEET 1 AF 3 ARG A 562 LEU A 568 0 SHEET 2 AF 3 TYR A 447 VAL A 454 -1 O TYR A 447 N LEU A 568 SHEET 3 AF 3 THR A 619 VAL A 622 1 O THR A 619 N VAL A 452 SHEET 1 AG 4 LEU A 555 VAL A 556 0 SHEET 2 AG 4 GLU A 465 ALA A 469 -1 O PHE A 466 N LEU A 555 SHEET 3 AG 4 GLY A 571 LYS A 579 -1 O TYR A 574 N ALA A 469 SHEET 4 AG 4 GLN A 591 VAL A 595 -1 O GLN A 591 N LEU A 575 SHEET 1 AH 2 TYR A 477 ARG A 480 0 SHEET 2 AH 2 PHE A 541 VAL A 544 -1 O GLU A 542 N ALA A 479 LINK C ARG A 242 N MSE A 243 1555 1555 1.33 LINK C MSE A 243 N THR A 244 1555 1555 1.33 SITE 1 AC1 5 GLN A 215 LEU A 478 TRP A 543 LEU A 569 SITE 2 AC1 5 TYR A 573 SITE 1 AC2 7 GLN A 215 VAL A 216 GLY A 217 ASP A 218 SITE 2 AC2 7 LYS A 481 ALA A 540 PHE A 541 SITE 1 AC3 6 GLN A 527 ASN A 531 PHE A 563 GLU A 564 SITE 2 AC3 6 TYR A 609 HOH A2215 CRYST1 67.360 74.063 104.461 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014846 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013502 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009573 0.00000