data_2XB4 # _entry.id 2XB4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2XB4 PDBE EBI-43544 WWPDB D_1290043544 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2XB4 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-04-05 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mukhopadhyay, A.' 1 'Kladova, A.V.' 2 'Gavel, O.Y.' 3 'Calvete, J.J.' 4 'Shnyrov, V.L.' 5 'Moura, I.' 6 'Moura, J.J.G.' 7 'Bursakov, S.A.' 8 'Romao, M.J.' 9 'Trincao, J.' 10 # _citation.id primary _citation.title ;Crystal Structure of the Zinc-, Cobalt-, and Iron-Containing Adenylate Kinase from Desulfovibrio Gigas: A Novel Metal-Containing Adenylate Kinase from Gram-Negative Bacteria. ; _citation.journal_abbrev J.Biol.Inorg.Chem. _citation.journal_volume 16 _citation.page_first 51 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM JJBCFA _citation.country GW _citation.journal_id_ISSN 0949-8257 _citation.journal_id_CSD 2154 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20821240 _citation.pdbx_database_id_DOI 10.1007/S00775-010-0700-8 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Mukhopadhyay, A.' 1 primary 'Kladova, A.V.' 2 primary 'Bursakov, S.A.' 3 primary 'Gavel, O.Y.' 4 primary 'Calvete, J.J.' 5 primary 'Shnyrov, V.L.' 6 primary 'Moura, I.' 7 primary 'Moura, J.J.G.' 8 primary 'Romao, M.J.' 9 primary 'Trincao, J.' 10 # _cell.entry_id 2XB4 _cell.length_a 39.390 _cell.length_b 119.440 _cell.length_c 149.590 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XB4 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'ADENYLATE KINASE' 24530.959 1 2.7.4.3 ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'S,R MESO-TARTARIC ACID' 150.087 1 ? ? ? ? 4 water nat water 18.015 320 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLESKGKDGW LLDGFPRNTVQAQKLFEALQEKGMKINFVIEILLPREVAKNRIMGRRICKNNPNHPNNIFIDAIKPNGDVCRVCGGALSA RADDQDEGAINKRHDIYYNTVDGTLAAAYYYKNMAAKEGFVYIELDGEGSIDSIKDTLLAQLA ; _entity_poly.pdbx_seq_one_letter_code_can ;MNILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLESKGKDGW LLDGFPRNTVQAQKLFEALQEKGMKINFVIEILLPREVAKNRIMGRRICKNNPNHPNNIFIDAIKPNGDVCRVCGGALSA RADDQDEGAINKRHDIYYNTVDGTLAAAYYYKNMAAKEGFVYIELDGEGSIDSIKDTLLAQLA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 ILE n 1 4 LEU n 1 5 ILE n 1 6 PHE n 1 7 GLY n 1 8 PRO n 1 9 ASN n 1 10 GLY n 1 11 SER n 1 12 GLY n 1 13 LYS n 1 14 GLY n 1 15 THR n 1 16 GLN n 1 17 GLY n 1 18 ASN n 1 19 LEU n 1 20 VAL n 1 21 LYS n 1 22 ASP n 1 23 LYS n 1 24 TYR n 1 25 SER n 1 26 LEU n 1 27 ALA n 1 28 HIS n 1 29 ILE n 1 30 GLU n 1 31 SER n 1 32 GLY n 1 33 GLY n 1 34 ILE n 1 35 PHE n 1 36 ARG n 1 37 GLU n 1 38 HIS n 1 39 ILE n 1 40 GLY n 1 41 GLY n 1 42 GLY n 1 43 THR n 1 44 GLU n 1 45 LEU n 1 46 GLY n 1 47 LYS n 1 48 LYS n 1 49 ALA n 1 50 LYS n 1 51 GLU n 1 52 PHE n 1 53 ILE n 1 54 ASP n 1 55 ARG n 1 56 GLY n 1 57 ASP n 1 58 LEU n 1 59 VAL n 1 60 PRO n 1 61 ASP n 1 62 ASP n 1 63 ILE n 1 64 THR n 1 65 ILE n 1 66 PRO n 1 67 MET n 1 68 VAL n 1 69 LEU n 1 70 GLU n 1 71 THR n 1 72 LEU n 1 73 GLU n 1 74 SER n 1 75 LYS n 1 76 GLY n 1 77 LYS n 1 78 ASP n 1 79 GLY n 1 80 TRP n 1 81 LEU n 1 82 LEU n 1 83 ASP n 1 84 GLY n 1 85 PHE n 1 86 PRO n 1 87 ARG n 1 88 ASN n 1 89 THR n 1 90 VAL n 1 91 GLN n 1 92 ALA n 1 93 GLN n 1 94 LYS n 1 95 LEU n 1 96 PHE n 1 97 GLU n 1 98 ALA n 1 99 LEU n 1 100 GLN n 1 101 GLU n 1 102 LYS n 1 103 GLY n 1 104 MET n 1 105 LYS n 1 106 ILE n 1 107 ASN n 1 108 PHE n 1 109 VAL n 1 110 ILE n 1 111 GLU n 1 112 ILE n 1 113 LEU n 1 114 LEU n 1 115 PRO n 1 116 ARG n 1 117 GLU n 1 118 VAL n 1 119 ALA n 1 120 LYS n 1 121 ASN n 1 122 ARG n 1 123 ILE n 1 124 MET n 1 125 GLY n 1 126 ARG n 1 127 ARG n 1 128 ILE n 1 129 CYS n 1 130 LYS n 1 131 ASN n 1 132 ASN n 1 133 PRO n 1 134 ASN n 1 135 HIS n 1 136 PRO n 1 137 ASN n 1 138 ASN n 1 139 ILE n 1 140 PHE n 1 141 ILE n 1 142 ASP n 1 143 ALA n 1 144 ILE n 1 145 LYS n 1 146 PRO n 1 147 ASN n 1 148 GLY n 1 149 ASP n 1 150 VAL n 1 151 CYS n 1 152 ARG n 1 153 VAL n 1 154 CYS n 1 155 GLY n 1 156 GLY n 1 157 ALA n 1 158 LEU n 1 159 SER n 1 160 ALA n 1 161 ARG n 1 162 ALA n 1 163 ASP n 1 164 ASP n 1 165 GLN n 1 166 ASP n 1 167 GLU n 1 168 GLY n 1 169 ALA n 1 170 ILE n 1 171 ASN n 1 172 LYS n 1 173 ARG n 1 174 HIS n 1 175 ASP n 1 176 ILE n 1 177 TYR n 1 178 TYR n 1 179 ASN n 1 180 THR n 1 181 VAL n 1 182 ASP n 1 183 GLY n 1 184 THR n 1 185 LEU n 1 186 ALA n 1 187 ALA n 1 188 ALA n 1 189 TYR n 1 190 TYR n 1 191 TYR n 1 192 LYS n 1 193 ASN n 1 194 MET n 1 195 ALA n 1 196 ALA n 1 197 LYS n 1 198 GLU n 1 199 GLY n 1 200 PHE n 1 201 VAL n 1 202 TYR n 1 203 ILE n 1 204 GLU n 1 205 LEU n 1 206 ASP n 1 207 GLY n 1 208 GLU n 1 209 GLY n 1 210 SER n 1 211 ILE n 1 212 ASP n 1 213 SER n 1 214 ILE n 1 215 LYS n 1 216 ASP n 1 217 THR n 1 218 LEU n 1 219 LEU n 1 220 ALA n 1 221 GLN n 1 222 LEU n 1 223 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'DESULFOVIBRIO GIGAS' _entity_src_nat.pdbx_ncbi_taxonomy_id 879 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C7U112_DESGI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession C7U112 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2XB4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 223 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C7U112 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 223 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 223 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2XB4 _struct_ref_seq_dif.mon_id ASP _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 142 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code C7U112 _struct_ref_seq_dif.db_mon_id GLU _struct_ref_seq_dif.pdbx_seq_db_seq_num 142 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 142 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SRT non-polymer . 'S,R MESO-TARTARIC ACID' ? 'C4 H6 O6' 150.087 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 2XB4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.59 _exptl_crystal.density_percent_sol 65.5 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.2 M TARTRATE NA/K, 0.1 M MES (PH 6.5) AND 20% PEG 2K OR 8K (THE PROTEIN:WELL SOLUTION RATIO IN THE DROP WAS 1:1, 1:2 OR 1:3 WITH THE FINAL DROP VOLUME OF 4, 6 OR 8 MICRO LITRE) ; # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.7266 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength 1.7266 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2XB4 _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 23.19 _reflns.d_resolution_high 1.80 _reflns.number_obs 31474 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.20 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all 95.5 _reflns_shell.Rmerge_I_obs 0.34 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.60 _reflns_shell.pdbx_redundancy 6 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2XB4 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 31474 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.92 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.53 _refine.ls_R_factor_obs 0.17967 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17793 _refine.ls_R_factor_R_free 0.21152 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1671 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.B_iso_mean 14.049 _refine.aniso_B[1][1] 0.13 _refine.aniso_B[2][2] -0.08 _refine.aniso_B[3][3] -0.05 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.097 _refine.pdbx_overall_ESU_R_Free 0.099 _refine.overall_SU_ML 0.074 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.375 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1718 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 320 _refine_hist.number_atoms_total 2049 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 23.92 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.028 0.022 ? 1767 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.214 1.975 ? 2381 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.814 5.000 ? 225 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.751 25.060 ? 83 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.215 15.000 ? 314 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.409 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.207 0.200 ? 259 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.021 ? 1347 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.276 1.500 ? 1102 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.081 2.000 ? 1760 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.865 3.000 ? 665 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 6.289 4.500 ? 619 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.846 _refine_ls_shell.number_reflns_R_work 2185 _refine_ls_shell.R_factor_R_work 0.338 _refine_ls_shell.percent_reflns_obs 95.46 _refine_ls_shell.R_factor_R_free 0.367 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 105 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2XB4 _struct.title 'Crystal structures of zinc containing Adenylate kinase from Desulfovibrio gigas' _struct.pdbx_descriptor 'ADENYLATE KINASE (E.C.2.7.4.3)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2XB4 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'ATP-BINDING, NUCLEOTIDE-BINDING, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 12 ? SER A 25 ? GLY A 12 SER A 25 1 ? 14 HELX_P HELX_P2 2 SER A 31 ? ILE A 39 ? SER A 31 ILE A 39 1 ? 9 HELX_P HELX_P3 3 THR A 43 ? ASP A 54 ? THR A 43 ASP A 54 1 ? 12 HELX_P HELX_P4 4 PRO A 60 ? GLY A 76 ? PRO A 60 GLY A 76 1 ? 17 HELX_P HELX_P5 5 ASN A 88 ? LYS A 102 ? ASN A 88 LYS A 102 1 ? 15 HELX_P HELX_P6 6 PRO A 115 ? GLY A 125 ? PRO A 115 GLY A 125 1 ? 11 HELX_P HELX_P7 7 ILE A 141 ? LYS A 145 ? ILE A 141 LYS A 145 5 ? 5 HELX_P HELX_P8 8 ARG A 161 ? GLN A 165 ? ARG A 161 GLN A 165 5 ? 5 HELX_P HELX_P9 9 ASP A 166 ? TYR A 178 ? ASP A 166 TYR A 178 1 ? 13 HELX_P HELX_P10 10 GLY A 183 ? ASN A 193 ? GLY A 183 ASN A 193 1 ? 11 HELX_P HELX_P11 11 MET A 194 ? GLY A 199 ? MET A 194 GLY A 199 1 ? 6 HELX_P HELX_P12 12 SER A 210 ? ALA A 223 ? SER A 210 ALA A 223 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 151 SG ? ? A ZN 1224 A CYS 151 1_555 ? ? ? ? ? ? ? 2.337 ? metalc2 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 129 SG ? ? A ZN 1224 A CYS 129 1_555 ? ? ? ? ? ? ? 2.315 ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 135 ND1 ? ? A ZN 1224 A HIS 135 1_555 ? ? ? ? ? ? ? 2.025 ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 154 SG ? ? A ZN 1224 A CYS 154 1_555 ? ? ? ? ? ? ? 2.346 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 85 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 85 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 86 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 86 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 7.68 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AB 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ALA A 27 ? GLU A 30 ? ALA A 27 GLU A 30 AA 2 TRP A 80 ? ASP A 83 ? TRP A 80 ASP A 83 AA 3 ASN A 2 ? PHE A 6 ? ASN A 2 PHE A 6 AA 4 PHE A 108 ? LEU A 113 ? PHE A 108 LEU A 113 AA 5 VAL A 201 ? ASP A 206 ? VAL A 201 ASP A 206 AB 1 ILE A 128 ? CYS A 129 ? ILE A 128 CYS A 129 AB 2 LEU A 158 ? SER A 159 ? LEU A 158 SER A 159 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 29 ? N ILE A 29 O LEU A 81 ? O LEU A 81 AA 2 3 N LEU A 82 ? N LEU A 82 O ILE A 3 ? O ILE A 3 AA 3 4 N LEU A 4 ? N LEU A 4 O PHE A 108 ? O PHE A 108 AA 4 5 N VAL A 109 ? N VAL A 109 O VAL A 201 ? O VAL A 201 AB 1 2 N ILE A 128 ? N ILE A 128 O SER A 159 ? O SER A 159 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 1224' AC2 Software ? ? ? ? 14 'BINDING SITE FOR RESIDUE SRT A 1225' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 129 ? CYS A 129 . ? 1_555 ? 2 AC1 4 HIS A 135 ? HIS A 135 . ? 1_555 ? 3 AC1 4 CYS A 151 ? CYS A 151 . ? 1_555 ? 4 AC1 4 CYS A 154 ? CYS A 154 . ? 1_555 ? 5 AC2 14 PRO A 8 ? PRO A 8 . ? 1_555 ? 6 AC2 14 ASN A 9 ? ASN A 9 . ? 1_555 ? 7 AC2 14 GLY A 10 ? GLY A 10 . ? 1_555 ? 8 AC2 14 SER A 11 ? SER A 11 . ? 1_555 ? 9 AC2 14 GLY A 12 ? GLY A 12 . ? 1_555 ? 10 AC2 14 LYS A 13 ? LYS A 13 . ? 1_555 ? 11 AC2 14 ARG A 126 ? ARG A 126 . ? 1_555 ? 12 AC2 14 ASN A 131 ? ASN A 131 . ? 3_655 ? 13 AC2 14 ASN A 132 ? ASN A 132 . ? 3_655 ? 14 AC2 14 HOH D . ? HOH A 2021 . ? 1_555 ? 15 AC2 14 HOH D . ? HOH A 2317 . ? 1_555 ? 16 AC2 14 HOH D . ? HOH A 2318 . ? 1_555 ? 17 AC2 14 HOH D . ? HOH A 2319 . ? 1_555 ? 18 AC2 14 HOH D . ? HOH A 2320 . ? 1_555 ? # _database_PDB_matrix.entry_id 2XB4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2XB4 _atom_sites.fract_transf_matrix[1][1] 0.025387 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008372 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006685 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 HIS 28 28 28 HIS HIS A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 HIS 38 38 38 HIS HIS A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 MET 67 67 67 MET MET A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 TRP 80 80 80 TRP TRP A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 MET 104 104 104 MET MET A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 MET 124 124 124 MET MET A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 CYS 129 129 129 CYS CYS A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 ASN 147 147 147 ASN ASN A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 CYS 154 154 154 CYS CYS A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 GLU 167 167 167 GLU GLU A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 ASN 171 171 171 ASN ASN A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 HIS 174 174 174 HIS HIS A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 TYR 178 178 178 TYR TYR A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 VAL 181 181 181 VAL VAL A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 THR 184 184 184 THR THR A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 TYR 190 190 190 TYR TYR A . n A 1 191 TYR 191 191 191 TYR TYR A . n A 1 192 LYS 192 192 192 LYS LYS A . n A 1 193 ASN 193 193 193 ASN ASN A . n A 1 194 MET 194 194 194 MET MET A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 LYS 197 197 197 LYS LYS A . n A 1 198 GLU 198 198 198 GLU GLU A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 TYR 202 202 202 TYR TYR A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ASP 206 206 206 ASP ASP A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 LYS 215 215 215 LYS LYS A . n A 1 216 ASP 216 216 216 ASP ASP A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 GLN 221 221 221 GLN GLN A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 ALA 223 223 223 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 1224 1224 ZN ZN A . C 3 SRT 1 1225 1225 SRT SRT A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . D 4 HOH 113 2113 2113 HOH HOH A . D 4 HOH 114 2114 2114 HOH HOH A . D 4 HOH 115 2115 2115 HOH HOH A . D 4 HOH 116 2116 2116 HOH HOH A . D 4 HOH 117 2117 2117 HOH HOH A . D 4 HOH 118 2118 2118 HOH HOH A . D 4 HOH 119 2119 2119 HOH HOH A . D 4 HOH 120 2120 2120 HOH HOH A . D 4 HOH 121 2121 2121 HOH HOH A . D 4 HOH 122 2122 2122 HOH HOH A . D 4 HOH 123 2123 2123 HOH HOH A . D 4 HOH 124 2124 2124 HOH HOH A . D 4 HOH 125 2125 2125 HOH HOH A . D 4 HOH 126 2126 2126 HOH HOH A . D 4 HOH 127 2127 2127 HOH HOH A . D 4 HOH 128 2128 2128 HOH HOH A . D 4 HOH 129 2129 2129 HOH HOH A . D 4 HOH 130 2130 2130 HOH HOH A . D 4 HOH 131 2131 2131 HOH HOH A . D 4 HOH 132 2132 2132 HOH HOH A . D 4 HOH 133 2133 2133 HOH HOH A . D 4 HOH 134 2134 2134 HOH HOH A . D 4 HOH 135 2135 2135 HOH HOH A . D 4 HOH 136 2136 2136 HOH HOH A . D 4 HOH 137 2137 2137 HOH HOH A . D 4 HOH 138 2138 2138 HOH HOH A . D 4 HOH 139 2139 2139 HOH HOH A . D 4 HOH 140 2140 2140 HOH HOH A . D 4 HOH 141 2141 2141 HOH HOH A . D 4 HOH 142 2142 2142 HOH HOH A . D 4 HOH 143 2143 2143 HOH HOH A . D 4 HOH 144 2144 2144 HOH HOH A . D 4 HOH 145 2145 2145 HOH HOH A . D 4 HOH 146 2146 2146 HOH HOH A . D 4 HOH 147 2147 2147 HOH HOH A . D 4 HOH 148 2148 2148 HOH HOH A . D 4 HOH 149 2149 2149 HOH HOH A . D 4 HOH 150 2150 2150 HOH HOH A . D 4 HOH 151 2151 2151 HOH HOH A . D 4 HOH 152 2152 2152 HOH HOH A . D 4 HOH 153 2153 2153 HOH HOH A . D 4 HOH 154 2154 2154 HOH HOH A . D 4 HOH 155 2155 2155 HOH HOH A . D 4 HOH 156 2156 2156 HOH HOH A . D 4 HOH 157 2157 2157 HOH HOH A . D 4 HOH 158 2158 2158 HOH HOH A . D 4 HOH 159 2159 2159 HOH HOH A . D 4 HOH 160 2160 2160 HOH HOH A . D 4 HOH 161 2161 2161 HOH HOH A . D 4 HOH 162 2162 2162 HOH HOH A . D 4 HOH 163 2163 2163 HOH HOH A . D 4 HOH 164 2164 2164 HOH HOH A . D 4 HOH 165 2165 2165 HOH HOH A . D 4 HOH 166 2166 2166 HOH HOH A . D 4 HOH 167 2167 2167 HOH HOH A . D 4 HOH 168 2168 2168 HOH HOH A . D 4 HOH 169 2169 2169 HOH HOH A . D 4 HOH 170 2170 2170 HOH HOH A . D 4 HOH 171 2171 2171 HOH HOH A . D 4 HOH 172 2172 2172 HOH HOH A . D 4 HOH 173 2173 2173 HOH HOH A . D 4 HOH 174 2174 2174 HOH HOH A . D 4 HOH 175 2175 2175 HOH HOH A . D 4 HOH 176 2176 2176 HOH HOH A . D 4 HOH 177 2177 2177 HOH HOH A . D 4 HOH 178 2178 2178 HOH HOH A . D 4 HOH 179 2179 2179 HOH HOH A . D 4 HOH 180 2180 2180 HOH HOH A . D 4 HOH 181 2181 2181 HOH HOH A . D 4 HOH 182 2182 2182 HOH HOH A . D 4 HOH 183 2183 2183 HOH HOH A . D 4 HOH 184 2184 2184 HOH HOH A . D 4 HOH 185 2185 2185 HOH HOH A . D 4 HOH 186 2186 2186 HOH HOH A . D 4 HOH 187 2187 2187 HOH HOH A . D 4 HOH 188 2188 2188 HOH HOH A . D 4 HOH 189 2189 2189 HOH HOH A . D 4 HOH 190 2190 2190 HOH HOH A . D 4 HOH 191 2191 2191 HOH HOH A . D 4 HOH 192 2192 2192 HOH HOH A . D 4 HOH 193 2193 2193 HOH HOH A . D 4 HOH 194 2194 2194 HOH HOH A . D 4 HOH 195 2195 2195 HOH HOH A . D 4 HOH 196 2196 2196 HOH HOH A . D 4 HOH 197 2197 2197 HOH HOH A . D 4 HOH 198 2198 2198 HOH HOH A . D 4 HOH 199 2199 2199 HOH HOH A . D 4 HOH 200 2200 2200 HOH HOH A . D 4 HOH 201 2201 2201 HOH HOH A . D 4 HOH 202 2202 2202 HOH HOH A . D 4 HOH 203 2203 2203 HOH HOH A . D 4 HOH 204 2204 2204 HOH HOH A . D 4 HOH 205 2205 2205 HOH HOH A . D 4 HOH 206 2206 2206 HOH HOH A . D 4 HOH 207 2207 2207 HOH HOH A . D 4 HOH 208 2208 2208 HOH HOH A . D 4 HOH 209 2209 2209 HOH HOH A . D 4 HOH 210 2210 2210 HOH HOH A . D 4 HOH 211 2211 2211 HOH HOH A . D 4 HOH 212 2212 2212 HOH HOH A . D 4 HOH 213 2213 2213 HOH HOH A . D 4 HOH 214 2214 2214 HOH HOH A . D 4 HOH 215 2215 2215 HOH HOH A . D 4 HOH 216 2216 2216 HOH HOH A . D 4 HOH 217 2217 2217 HOH HOH A . D 4 HOH 218 2218 2218 HOH HOH A . D 4 HOH 219 2219 2219 HOH HOH A . D 4 HOH 220 2220 2220 HOH HOH A . D 4 HOH 221 2221 2221 HOH HOH A . D 4 HOH 222 2222 2222 HOH HOH A . D 4 HOH 223 2223 2223 HOH HOH A . D 4 HOH 224 2224 2224 HOH HOH A . D 4 HOH 225 2225 2225 HOH HOH A . D 4 HOH 226 2226 2226 HOH HOH A . D 4 HOH 227 2227 2227 HOH HOH A . D 4 HOH 228 2228 2228 HOH HOH A . D 4 HOH 229 2229 2229 HOH HOH A . D 4 HOH 230 2230 2230 HOH HOH A . D 4 HOH 231 2231 2231 HOH HOH A . D 4 HOH 232 2232 2232 HOH HOH A . D 4 HOH 233 2233 2233 HOH HOH A . D 4 HOH 234 2234 2234 HOH HOH A . D 4 HOH 235 2235 2235 HOH HOH A . D 4 HOH 236 2236 2236 HOH HOH A . D 4 HOH 237 2237 2237 HOH HOH A . D 4 HOH 238 2238 2238 HOH HOH A . D 4 HOH 239 2239 2239 HOH HOH A . D 4 HOH 240 2240 2240 HOH HOH A . D 4 HOH 241 2241 2241 HOH HOH A . D 4 HOH 242 2242 2242 HOH HOH A . D 4 HOH 243 2243 2243 HOH HOH A . D 4 HOH 244 2244 2244 HOH HOH A . D 4 HOH 245 2245 2245 HOH HOH A . D 4 HOH 246 2246 2246 HOH HOH A . D 4 HOH 247 2247 2247 HOH HOH A . D 4 HOH 248 2248 2248 HOH HOH A . D 4 HOH 249 2249 2249 HOH HOH A . D 4 HOH 250 2250 2250 HOH HOH A . D 4 HOH 251 2251 2251 HOH HOH A . D 4 HOH 252 2252 2252 HOH HOH A . D 4 HOH 253 2253 2253 HOH HOH A . D 4 HOH 254 2254 2254 HOH HOH A . D 4 HOH 255 2255 2255 HOH HOH A . D 4 HOH 256 2256 2256 HOH HOH A . D 4 HOH 257 2257 2257 HOH HOH A . D 4 HOH 258 2258 2258 HOH HOH A . D 4 HOH 259 2259 2259 HOH HOH A . D 4 HOH 260 2260 2260 HOH HOH A . D 4 HOH 261 2261 2261 HOH HOH A . D 4 HOH 262 2262 2262 HOH HOH A . D 4 HOH 263 2263 2263 HOH HOH A . D 4 HOH 264 2264 2264 HOH HOH A . D 4 HOH 265 2265 2265 HOH HOH A . D 4 HOH 266 2266 2266 HOH HOH A . D 4 HOH 267 2267 2267 HOH HOH A . D 4 HOH 268 2268 2268 HOH HOH A . D 4 HOH 269 2269 2269 HOH HOH A . D 4 HOH 270 2270 2270 HOH HOH A . D 4 HOH 271 2271 2271 HOH HOH A . D 4 HOH 272 2272 2272 HOH HOH A . D 4 HOH 273 2273 2273 HOH HOH A . D 4 HOH 274 2274 2274 HOH HOH A . D 4 HOH 275 2275 2275 HOH HOH A . D 4 HOH 276 2276 2276 HOH HOH A . D 4 HOH 277 2277 2277 HOH HOH A . D 4 HOH 278 2278 2278 HOH HOH A . D 4 HOH 279 2279 2279 HOH HOH A . D 4 HOH 280 2280 2280 HOH HOH A . D 4 HOH 281 2281 2281 HOH HOH A . D 4 HOH 282 2282 2282 HOH HOH A . D 4 HOH 283 2283 2283 HOH HOH A . D 4 HOH 284 2284 2284 HOH HOH A . D 4 HOH 285 2285 2285 HOH HOH A . D 4 HOH 286 2286 2286 HOH HOH A . D 4 HOH 287 2287 2287 HOH HOH A . D 4 HOH 288 2288 2288 HOH HOH A . D 4 HOH 289 2289 2289 HOH HOH A . D 4 HOH 290 2290 2290 HOH HOH A . D 4 HOH 291 2291 2291 HOH HOH A . D 4 HOH 292 2292 2292 HOH HOH A . D 4 HOH 293 2293 2293 HOH HOH A . D 4 HOH 294 2294 2294 HOH HOH A . D 4 HOH 295 2295 2295 HOH HOH A . D 4 HOH 296 2296 2296 HOH HOH A . D 4 HOH 297 2297 2297 HOH HOH A . D 4 HOH 298 2298 2298 HOH HOH A . D 4 HOH 299 2299 2299 HOH HOH A . D 4 HOH 300 2300 2300 HOH HOH A . D 4 HOH 301 2301 2301 HOH HOH A . D 4 HOH 302 2302 2302 HOH HOH A . D 4 HOH 303 2303 2303 HOH HOH A . D 4 HOH 304 2304 2304 HOH HOH A . D 4 HOH 305 2305 2305 HOH HOH A . D 4 HOH 306 2306 2306 HOH HOH A . D 4 HOH 307 2307 2307 HOH HOH A . D 4 HOH 308 2308 2308 HOH HOH A . D 4 HOH 309 2309 2309 HOH HOH A . D 4 HOH 310 2310 2310 HOH HOH A . D 4 HOH 311 2311 2311 HOH HOH A . D 4 HOH 312 2312 2312 HOH HOH A . D 4 HOH 313 2313 2313 HOH HOH A . D 4 HOH 314 2314 2314 HOH HOH A . D 4 HOH 315 2315 2315 HOH HOH A . D 4 HOH 316 2316 2316 HOH HOH A . D 4 HOH 317 2317 2317 HOH HOH A . D 4 HOH 318 2318 2318 HOH HOH A . D 4 HOH 319 2319 2319 HOH HOH A . D 4 HOH 320 2320 2320 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8500 ? 1 MORE -2.4 ? 1 'SSA (A^2)' 39410 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 39.3900000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 39.3900000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 151 ? A CYS 151 ? 1_555 ZN ? B ZN . ? A ZN 1224 ? 1_555 SG ? A CYS 129 ? A CYS 129 ? 1_555 108.8 ? 2 SG ? A CYS 151 ? A CYS 151 ? 1_555 ZN ? B ZN . ? A ZN 1224 ? 1_555 ND1 ? A HIS 135 ? A HIS 135 ? 1_555 108.6 ? 3 SG ? A CYS 129 ? A CYS 129 ? 1_555 ZN ? B ZN . ? A ZN 1224 ? 1_555 ND1 ? A HIS 135 ? A HIS 135 ? 1_555 119.5 ? 4 SG ? A CYS 151 ? A CYS 151 ? 1_555 ZN ? B ZN . ? A ZN 1224 ? 1_555 SG ? A CYS 154 ? A CYS 154 ? 1_555 115.9 ? 5 SG ? A CYS 129 ? A CYS 129 ? 1_555 ZN ? B ZN . ? A ZN 1224 ? 1_555 SG ? A CYS 154 ? A CYS 154 ? 1_555 97.4 ? 6 ND1 ? A HIS 135 ? A HIS 135 ? 1_555 ZN ? B ZN . ? A ZN 1224 ? 1_555 SG ? A CYS 154 ? A CYS 154 ? 1_555 106.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-22 2 'Structure model' 1 1 2011-09-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 21.0230 23.3037 16.9859 0.0991 0.0547 0.0951 -0.0356 0.0319 -0.0086 2.1724 0.8486 2.4963 -0.2145 1.4777 0.7057 -0.0834 0.2194 0.1279 -0.1051 0.0196 -0.1120 -0.3443 0.1978 0.0638 'X-RAY DIFFRACTION' 2 ? refined 31.8169 9.8561 23.5330 0.1225 0.0478 0.0224 0.0284 -0.0071 -0.0149 9.8447 9.1505 7.2526 -6.5263 0.1115 -1.2546 0.6290 0.4527 0.1075 -0.6223 -0.4053 -0.0460 0.4731 0.0614 -0.2237 'X-RAY DIFFRACTION' 3 ? refined 29.9661 5.1335 31.6639 0.0541 0.0743 0.0504 0.0110 -0.0087 -0.0131 0.8041 4.1693 1.0673 0.4185 0.5796 0.5093 0.0374 -0.1652 -0.0216 0.1299 0.0082 0.1193 0.0826 0.0348 -0.0456 'X-RAY DIFFRACTION' 4 ? refined 28.8136 21.2317 25.4687 0.0555 0.0870 0.0816 -0.0437 0.0126 -0.0467 2.5720 3.4029 3.3259 -0.5138 0.6502 -1.5895 -0.0270 0.0233 0.1943 0.1636 -0.0177 -0.3166 -0.1484 0.3898 0.0447 'X-RAY DIFFRACTION' 5 ? refined 20.4258 17.8567 34.6811 0.1748 0.0897 0.0715 -0.0080 0.0103 -0.0414 4.5842 5.6075 2.7055 2.9672 3.1215 3.0231 -0.0576 -0.1896 0.0498 0.2700 0.0842 -0.1302 -0.1640 -0.0163 -0.0266 'X-RAY DIFFRACTION' 6 ? refined 10.7550 21.4588 20.3372 0.0682 0.0389 0.0747 -0.0066 0.0306 0.0169 2.7531 1.3850 2.1496 0.1362 0.6247 0.6975 0.0068 -0.0884 0.1196 0.0643 -0.0373 0.1256 -0.1721 -0.1597 0.0304 'X-RAY DIFFRACTION' 7 ? refined 10.4583 13.2662 -0.6703 0.0254 0.0937 0.0693 -0.0037 -0.0051 0.0236 1.9063 1.1469 4.4963 0.8082 -1.8940 -0.2921 0.0285 0.2152 0.1375 0.0147 0.0225 0.1156 0.0753 -0.2343 -0.0510 'X-RAY DIFFRACTION' 8 ? refined 11.6994 7.7966 -0.6102 0.0388 0.0808 0.0418 -0.0158 0.0023 -0.0051 0.9501 1.9802 5.5766 0.5907 -1.2044 -1.6847 -0.0299 0.1940 0.0459 -0.0840 0.1103 0.1347 0.4161 -0.2445 -0.0804 'X-RAY DIFFRACTION' 9 ? refined 9.5786 18.8483 25.6991 0.0434 0.0679 0.0831 0.0155 0.0451 -0.0075 1.4539 3.6592 2.0126 0.7088 0.3565 0.8940 -0.0578 -0.0427 0.1409 0.0093 0.0801 0.1036 -0.0995 -0.1160 -0.0222 'X-RAY DIFFRACTION' 10 ? refined 13.6298 31.1909 11.9383 0.4561 0.3251 0.3001 -0.2175 0.0304 0.1596 7.0576 17.2890 40.8067 -0.3869 5.7253 14.1799 -0.8230 0.8248 0.6887 -1.7867 0.7800 -0.2496 -2.7718 0.1337 0.0431 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 30 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 31 ? ? A 41 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 42 ? ? A 69 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 70 ? ? A 85 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 86 ? ? A 104 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 105 ? ? A 119 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 120 ? ? A 147 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 148 ? ? A 170 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 171 ? ? A 208 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 209 ? ? A 223 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0102 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 autoSHARP phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2086 ? ? O A HOH 2087 ? ? 1.75 2 1 O A HOH 2129 ? ? O A HOH 2241 ? ? 2.03 3 1 OE2 A GLU 44 ? A O A HOH 2094 ? ? 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A GLU 44 ? A CD A GLU 44 ? A 1.618 1.515 0.103 0.015 N 2 1 N A LYS 48 ? ? CA A LYS 48 ? ? 1.306 1.459 -0.153 0.020 N 3 1 CE A LYS 48 ? ? NZ A LYS 48 ? ? 1.021 1.486 -0.465 0.025 N 4 1 CG A GLU 117 ? ? CD A GLU 117 ? ? 1.605 1.515 0.090 0.015 N 5 1 CB A ASP 142 ? ? CG A ASP 142 ? ? 1.647 1.513 0.134 0.021 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A LYS 48 ? ? CA A LYS 48 ? ? CB A LYS 48 ? ? 122.90 110.60 12.30 1.80 N 2 1 CD A LYS 48 ? ? CE A LYS 48 ? ? NZ A LYS 48 ? ? 92.73 111.70 -18.97 2.30 N 3 1 CG A ARG 55 ? ? CD A ARG 55 ? ? NE A ARG 55 ? ? 95.73 111.80 -16.07 2.10 N 4 1 CD A ARG 55 ? ? NE A ARG 55 ? ? CZ A ARG 55 ? ? 132.52 123.60 8.92 1.40 N 5 1 NE A ARG 55 ? ? CZ A ARG 55 ? ? NH1 A ARG 55 ? ? 127.68 120.30 7.38 0.50 N 6 1 NE A ARG 55 ? ? CZ A ARG 55 ? ? NH2 A ARG 55 ? ? 109.95 120.30 -10.35 0.50 N 7 1 CB A ASP 62 ? ? CG A ASP 62 ? ? OD1 A ASP 62 ? ? 123.81 118.30 5.51 0.90 N 8 1 CB A ASP 142 ? ? CG A ASP 142 ? ? OD2 A ASP 142 ? ? 126.59 118.30 8.29 0.90 N 9 1 NE A ARG 152 ? ? CZ A ARG 152 ? ? NH1 A ARG 152 ? ? 117.18 120.30 -3.12 0.50 N 10 1 NE A ARG 173 ? ? CZ A ARG 173 ? ? NH1 A ARG 173 ? ? 125.95 120.30 5.65 0.50 N 11 1 NE A ARG 173 ? ? CZ A ARG 173 ? ? NH2 A ARG 173 ? ? 115.20 120.30 -5.10 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 182 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -150.94 _pdbx_validate_torsion.psi 19.69 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C2 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id SRT _pdbx_validate_chiral.auth_seq_id 1225 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 48 ? N ? A LYS 48 N 2 1 Y 0 A LYS 48 ? CD ? A LYS 48 CD 3 1 Y 0 A LYS 48 ? CE ? A LYS 48 CE 4 1 Y 1 A GLU 101 ? CG ? A GLU 101 CG 5 1 Y 1 A GLU 101 ? CD ? A GLU 101 CD 6 1 Y 1 A GLU 101 ? OE1 ? A GLU 101 OE1 7 1 Y 1 A GLU 101 ? OE2 ? A GLU 101 OE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'S,R MESO-TARTARIC ACID' SRT 4 water HOH #