HEADER BETA-HAIRPIN 17-FEB-99 2XBH OBSLTE 25-AUG-99 2XBH 1C4B TITLE A BETA-HAIRPIN MIMIC FROM FCERI-ALPHA-CYCLO(RD-262) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (CYCLO(RD-262)); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: DISULFIDE BETWEEN CYS1 AND CYS13 SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: DERIVED FROM C-C' LOOP OF HUMAN FCERI-ALPHA KEYWDS BETA-HAIRPIN, PEPTIDE MIMIC, D-AMINO ACIDS, ALLERGY, FCERI, KEYWDS 2 IGE EXPDTA NMR, 15 STRUCTURES AUTHOR J.M.MCDONNELL,D.FUSHMAN,S.M.CAHILL,B.J.SUTTON,D.COWBURN REVDAT 1 22-FEB-99 2XBH 0 JRNL AUTH J.M.MCDONNELL,D.FUSHMAN,S.M.CAHILL,B.J.SUTTON, JRNL AUTH 2 D.COWBURN JRNL TITL SOLUTION STRUCTURES OF FCERI ALPHA-CHAIN MIMICS: A JRNL TITL 2 BETA-HAIRPIN PEPTIDE AND ITS RETROENANTIOMER JRNL REF J.AM.CHEM.SOC. V. 119 5321 1997 JRNL REFN ASTM JACSAT US ISSN 0002-7863 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA REMARK 3 AUTHORS : GUNTERT,WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2XBH COMPLIES WITH FORMAT V. 3.0, 1-DEC-2006 REMARK 4 REMARK 4 THIS FILE IS A TEST VERSION. REMARK 4 REMARK 4 THIS IS THE REMEDIATED VERSION OF THIS PDB ENTRY. REMARK 4 REMEDIATED DATA FILE REVISION 3.100 (2007-03-19) REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-1999. REMARK 100 THE RCSB ID CODE IS RCSB000503. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.00 REMARK 210 PH : 5.50 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, ROESY, TOCSY, DQF- REMARK 210 COSY, HMQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX500 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DIANA REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 DTY A 2 -105.04 139.08 REMARK 500 1 DLY A 3 -134.70 167.60 REMARK 500 1 DLE A 4 -115.83 155.91 REMARK 500 1 DAS A 8 -117.60 159.44 REMARK 500 1 DLY A 9 -61.24 140.24 REMARK 500 1 DTY A 10 -134.71 134.62 REMARK 500 1 DTY A 11 -100.04 152.89 REMARK 500 1 DIL A 12 112.05 140.74 REMARK 500 2 DTY A 2 -104.37 131.43 REMARK 500 2 DLY A 3 -134.83 162.14 REMARK 500 2 DLE A 4 -103.26 152.40 REMARK 500 2 DAS A 8 -119.41 157.72 REMARK 500 2 DLY A 9 -63.53 142.90 REMARK 500 2 DTY A 10 -134.84 147.05 REMARK 500 2 DTY A 11 -96.59 146.14 REMARK 500 2 DIL A 12 111.48 145.68 REMARK 500 3 DTY A 2 -135.11 119.34 REMARK 500 3 DLY A 3 -134.67 178.23 REMARK 500 3 DLE A 4 -117.73 155.40 REMARK 500 3 DAS A 8 -117.61 158.67 REMARK 500 3 DLY A 9 -61.96 140.97 REMARK 500 3 DTY A 10 -134.88 137.00 REMARK 500 3 DTY A 11 -101.48 136.03 REMARK 500 3 DIL A 12 -156.34 141.22 REMARK 500 4 DLY A 3 -154.00 143.12 REMARK 500 4 DLE A 4 -92.94 151.86 REMARK 500 4 DAS A 8 -120.41 161.41 REMARK 500 4 DLY A 9 -44.99 143.86 REMARK 500 4 DTY A 10 -137.31 148.37 REMARK 500 4 DTY A 11 -133.65 148.61 REMARK 500 4 DIL A 12 112.47 145.84 REMARK 500 5 DTY A 2 -94.19 101.58 REMARK 500 5 DLE A 4 -106.64 148.06 REMARK 500 5 DAS A 8 -116.24 156.82 REMARK 500 5 DLY A 9 -63.61 140.86 REMARK 500 5 DTY A 10 -104.69 151.64 REMARK 500 5 DTY A 11 -68.78 100.59 REMARK 500 5 DIL A 12 -160.64 144.99 REMARK 500 6 DTY A 2 -78.43 134.06 REMARK 500 6 DLY A 3 -134.29 142.26 REMARK 500 6 DLE A 4 -105.01 151.31 REMARK 500 6 DAS A 8 -116.74 157.06 REMARK 500 6 DLY A 9 -61.63 141.58 REMARK 500 6 DTY A 10 -134.90 137.49 REMARK 500 6 DTY A 11 -94.93 159.89 REMARK 500 6 DIL A 12 23.03 112.27 REMARK 500 7 DLY A 3 -135.03 148.13 REMARK 500 7 DLE A 4 -92.27 144.72 REMARK 500 7 DAS A 8 -113.62 158.79 REMARK 500 7 DLY A 9 -55.19 136.09 REMARK 500 7 DTY A 10 -134.74 176.85 REMARK 500 7 DTY A 11 -167.43 117.92 REMARK 500 8 DTY A 2 -56.19 138.27 REMARK 500 8 DLY A 3 -134.70 94.52 REMARK 500 8 DAL A 5 148.92 115.81 REMARK 500 8 DAS A 8 -106.17 151.30 REMARK 500 8 DLY A 9 -58.59 137.68 REMARK 500 8 DTY A 10 -135.46 150.25 REMARK 500 8 DTY A 11 -141.95 122.52 REMARK 500 9 DLE A 4 -96.13 141.29 REMARK 500 9 DAS A 8 -123.33 160.93 REMARK 500 9 DLY A 9 -59.28 141.48 REMARK 500 9 DTY A 10 -133.18 177.60 REMARK 500 9 DTY A 11 -143.28 130.89 REMARK 500 10 DTY A 2 -105.18 164.46 REMARK 500 10 DLY A 3 -133.79 110.89 REMARK 500 10 DLE A 4 -96.85 152.21 REMARK 500 10 DAS A 8 -110.99 144.87 REMARK 500 10 DLY A 9 -66.71 148.32 REMARK 500 10 DTY A 10 -135.96 176.67 REMARK 500 10 DTY A 11 -137.47 116.63 REMARK 500 10 DIL A 12 17.12 110.42 REMARK 500 11 DLY A 3 -134.84 139.08 REMARK 500 11 DLE A 4 -94.35 139.74 REMARK 500 11 DAS A 8 -119.50 165.15 REMARK 500 11 DLY A 9 -41.18 143.51 REMARK 500 11 DTY A 11 -100.57 143.31 REMARK 500 11 DIL A 12 109.75 136.08 REMARK 500 12 DTY A 2 -98.80 128.72 REMARK 500 12 DLE A 4 -110.61 151.44 REMARK 500 12 DAS A 8 -118.85 158.28 REMARK 500 12 DLY A 9 -60.96 140.77 REMARK 500 12 DTY A 10 -102.66 161.12 REMARK 500 12 DTY A 11 -85.09 110.87 REMARK 500 12 DIL A 12 33.02 115.39 REMARK 500 13 DTY A 2 -60.99 132.64 REMARK 500 13 DLY A 3 -146.14 151.85 REMARK 500 13 DLE A 4 -116.36 156.75 REMARK 500 13 DAS A 8 -117.78 162.54 REMARK 500 13 DLY A 9 -59.47 137.22 REMARK 500 13 DTY A 10 -105.18 146.49 REMARK 500 13 DTY A 11 -53.17 119.38 REMARK 500 14 DTY A 2 -106.61 135.92 REMARK 500 14 DLY A 3 -134.03 145.27 REMARK 500 14 DLE A 4 -92.76 151.57 REMARK 500 14 DAS A 8 -112.37 152.30 REMARK 500 14 DLY A 9 -54.97 143.07 REMARK 500 15 DTY A 2 -105.88 68.11 REMARK 500 15 DLY A 3 -131.77 104.38 REMARK 500 15 DLE A 4 -92.99 151.54 REMARK 500 15 DAS A 8 -103.98 145.77 REMARK 500 15 DLY A 9 -64.32 149.02 REMARK 500 15 DTY A 10 -134.55 168.01 REMARK 500 15 DTY A 11 -105.22 112.55 REMARK 500 15 DIL A 12 105.60 105.98 REMARK 600 REMARK 600 HETEROGEN REMARK 600 HERE IS THE STANDARD RESIDUE LIBRARY ENTRY FOR D-CYSTEINE. REMARK 600 IN THE STRUCTURE SUBMITTED HOWEVER DCY 1 LACKS THE REMARK 600 SULFHYDRYL HYDROGEN BECAUSE IT IS DISULFIDE LINKED TO REMARK 600 CYS 13. REMARK 600 THIS D AMINO ACID WAS GENERATED USING A PERL SCRIPT WHICH REMARK 600 CAN BE OBTAINED FROM THE AUTHOR. REMARK 600 REMARK 600 RESIDUE DCY 5 15 3 14 -25 REMARK 600 1 OMEGA -1 2 10.0000 2 1 3 4 0 REMARK 600 2 PHI 0 0 0.0000 1 3 5 13 0 REMARK 600 3 CHI1 1 3 1.3500 3 5 7 11 12 REMARK 600 4 CHI2 1 3 0.7500 5 7 11 12 12 REMARK 600 5 PSI 0 0 0.0000 3 5 13 15 0 REMARK 600 1 C C_BYL 2 8.2024 0.6824 -1.1357 0.000 REMARK 600 2 O O_BYL 2 -7.0004 0.1723 -2.2550 0.000 REMARK 600 3 N N_AMI 2 -6.4912 0.0000 0.0000 0.000 REMARK 600 4 HN H_AMI 0 3.2103 0.4226 0.9063 0.000 REMARK 600 5 CA C_ALI 3 1.1597 -1.4530 0.0000 0.000 REMARK 600 6 HA H_ALI 0 0.3677 -1.7661 -0.5112 0.910 REMARK 600 7 CB C_ALI 3 -1.9092 -2.0187 -0.7882 -1.183 REMARK 600 8 HB2 H_ALI 0 1.0041 -1.6627 -1.8178 -1.148 REMARK 600 9 HB3 H_ALI 0 1.0041 -1.6627 -0.3594 -2.119 REMARK 600 10 QB PSEUD 0 0.0000 -1.6627 -1.0886 -1.634 REMARK 600 11 SG S_RED 3 0.2687 -3.8479 -0.7581 -1.137 REMARK 600 12 HG H_SUL 0 0.1838 -4.0261 -1.4888 -2.234 REMARK 600 13 C C_BYL 2 8.2024 -1.9334 1.4526 0.000 REMARK 600 14 O O_BYL 2 -7.0004 -1.1232 2.3781 0.000 REMARK 600 15 N N_AMI 2 -6.4912 -3.2494 1.6072 0.000 REMARK 600 REMARK 600 HERE IS THE STANDARD RESIDUE LIBRARY ENTRY FOR D-ALANINE. REMARK 600 REMARK 600 THIS D AMINO ACID WAS GENERATED USING A PERL SCRIPT WHICH REMARK 600 CAN BE OBTAINED FROM THE AUTHOR. REMARK 600 REMARK 600 RESIDUE DALA 4 14 3 13 -18 REMARK 600 1 OMEGA -1 2 10.0000 2 1 3 4 0 REMARK 600 2 PHI 0 0 0.0000 1 3 5 12 0 REMARK 600 3 CHI1 1 3 1.3500 3 5 8 9 11 REMARK 600 4 PSI 0 0 0.0000 3 5 12 14 0 REMARK 600 1 C C_BYL 2 8.2024 0.6824 -1.1357 0.000 REMARK 600 2 O O_BYL 2 -7.0004 0.1723 -2.2550 0.000 REMARK 600 3 N N_AMI 2 -6.4912 0.0000 0.0000 0.000 REMARK 600 4 HN H_AMI 0 3.2103 0.4226 0.9063 0.000 REMARK 600 5 CA C_ALI 3 1.1597 -1.4530 0.0000 0.000 REMARK 600 6 HA H_ALI 0 0.3677 -1.7849 -0.4925 0.914 REMARK 600 7 QB PSEUD 0 0.0000 -2.0850 -0.9858 -1.487 REMARK 600 8 CB C_ALI 3 -1.6546 -1.9637 -0.7966 -1.202 REMARK 600 9 HB1 H_ALI 0 0.7354 -3.0537 -0.7963 -1.201 REMARK 600 10 HB2 H_ALI 0 0.7354 -1.6006 -1.8224 -1.139 REMARK 600 11 HB3 H_ALI 0 0.7354 -1.6006 -0.3386 -2.122 REMARK 600 12 C C_BYL 2 8.2024 -1.9587 1.4440 0.000 REMARK 600 13 O O_BYL 2 -7.0004 -1.1648 2.3835 0.000 REMARK 600 14 N N_AMI 2 -6.4912 -3.2772 1.5756 0.000 REMARK 600 REMARK 600 HERE IS THE STANDARD RESIDUE LIBRARY ENTRY FOR D-LYSINE. REMARK 600 REMARK 600 THIS D AMINO ACID WAS GENERATED USING A PERL SCRIPT WHICH REMARK 600 CAN BE OBTAINED FROM THE AUTHOR. REMARK 600 REMARK 600 RESIDUE DLYS 8 29 3 28 39 REMARK 600 1 OMEGA -1 2 10.0000 2 1 3 4 0 REMARK 600 2 PHI 0 0 0.0000 1 3 5 27 0 REMARK 600 3 CHI1 1 3 1.3500 3 5 7 11 26 REMARK 600 4 CHI2 1 3 1.3500 5 7 11 15 26 REMARK 600 5 CHI3 1 3 1.3500 7 11 15 19 26 REMARK 600 6 CHI4 1 3 1.3500 11 15 19 23 26 REMARK 600 7 CHI5 1 3 0.9000 15 19 23 24 26 REMARK 600 8 PSI 0 0 0.0000 3 5 27 29 0 REMARK 600 1 C C_BYL 2 8.2024 0.6824 -1.1357 0.000 REMARK 600 2 O O_BYL 2 -7.0004 0.1723 -2.2550 0.000 REMARK 600 3 N N_AMI 2 -6.4912 0.0000 0.0000 0.000 REMARK 600 4 HN H_AMI 0 3.2103 0.4226 0.9063 0.000 REMARK 600 5 CA C_ALI 3 1.1597 -1.4530 0.0000 0.000 REMARK 600 6 HA H_ALI 0 0.3677 -1.7797 -0.4805 0.922 REMARK 600 7 CB C_ALI 3 -0.5515 -1.9888 -0.8392 -1.161 REMARK 600 8 HB2 H_ALI 0 0.2687 -1.6169 -1.8605 -1.079 REMARK 600 9 HB3 H_ALI 0 0.2687 -1.6169 -0.4400 -2.105 REMARK 600 10 QB PSEUD 0 0.0000 -1.6169 -1.1502 -1.592 REMARK 600 11 CG C_ALI 3 -0.4525 -3.5188 -0.8471 -1.172 REMARK 600 12 HG2 H_ALI 0 0.3677 -3.8906 0.1742 -1.255 REMARK 600 13 HG3 H_ALI 0 0.3677 -3.8906 -1.2463 -0.228 REMARK 600 14 QG PSEUD 0 0.0000 -3.8906 -0.5361 -0.742 REMARK 600 15 CD C_ALI 3 -0.5515 -4.0546 -1.6863 -2.334 REMARK 600 16 HD2 H_ALI 0 0.3677 -3.6827 -2.7076 -2.251 REMARK 600 17 HD3 H_ALI 0 0.3677 -3.6827 -1.2871 -3.277 REMARK 600 18 QD PSEUD 0 0.0000 -3.6827 -1.9974 -2.764 REMARK 600 19 CE C_ALI 3 2.0082 -5.5845 -1.6941 -2.345 REMARK 600 20 HE2 H_ALI 0 -0.0849 -5.9587 -0.6738 -2.428 REMARK 600 21 HE3 H_ALI 0 -0.0849 -5.9587 -2.0943 -1.402 REMARK 600 22 QE PSEUD 0 0.0000 -5.9587 -1.3841 -1.915 REMARK 600 23 NZ N_AMI 3 -7.1983 -6.0907 -2.5086 -3.472 REMARK 600 24 HZ1 H_AMI 0 2.7294 -7.1041 -2.5293 -3.501 REMARK 600 25 HZ2 H_AMI 0 2.7294 -5.7789 -3.4718 -3.415 REMARK 600 26 QZ PSEUD 0 0.0000 -6.4415 -3.0006 -3.458 REMARK 600 27 C C_BYL 2 8.2024 -1.9587 1.4440 0.000 REMARK 600 28 O O_BYL 2 -7.0004 -1.1648 2.3835 0.000 REMARK 600 29 N N_AMI 2 -6.4912 -3.2772 1.5756 0.000 REMARK 600 REMARK 600 HERE IS THE STANDARD RESIDUE LIBRARY ENTRY FOR D-LEUCINE. REMARK 600 REMARK 600 THIS D AMINO ACID WAS GENERATED USING A PERL SCRIPT WHICH REMARK 600 CAN BE OBTAINED FROM THE AUTHOR. REMARK 600 REMARK 600 RESIDUE DLEU 7 26 3 25 -38 REMARK 600 1 OMEGA -1 2 10.0000 2 1 3 4 0 REMARK 600 2 PHI 0 0 0.0000 1 3 5 24 0 REMARK 600 3 CHI1 1 3 1.3500 3 5 7 11 23 REMARK 600 4 CHI2 1 3 1.3500 5 7 11 15 23 REMARK 600 5 CHI31 1 3 1.3500 7 11 15 16 18 REMARK 600 6 CHI32 1 3 1.3500 7 11 19 20 22 REMARK 600 7 PSI 0 0 0.0000 3 5 24 26 0 REMARK 600 1 C C_BYL 2 8.2024 0.6824 -1.1357 0.000 REMARK 600 2 O O_BYL 2 -7.0004 0.1723 -2.2550 0.000 REMARK 600 3 N N_AMI 2 -6.4912 0.0000 0.0000 0.000 REMARK 600 4 HN H_AMI 0 3.2103 0.4226 0.9063 0.000 REMARK 600 5 CA C_ALI 3 1.1597 -1.4530 0.0000 0.000 REMARK 600 6 HA H_ALI 0 0.3677 -1.7797 -0.4805 0.922 REMARK 600 7 CB C_ALI 3 -0.5374 -1.9888 -0.8392 -1.161 REMARK 600 8 HB2 H_ALI 0 0.3960 -1.5941 -1.8507 -1.065 REMARK 600 9 HB3 H_ALI 0 0.3960 -1.5941 -0.4301 -2.091 REMARK 600 10 QB PSEUD 0 0.0000 -1.5941 -1.1404 -1.578 REMARK 600 11 CG C_ALI 3 -0.1838 -3.5118 -0.9251 -1.280 REMARK 600 12 HG H_ALI 0 0.4525 -3.8975 -1.4120 -0.384 REMARK 600 13 QD1 PSEUD 0 0.0000 -4.0177 -1.9934 -2.759 REMARK 600 14 QD2 PSEUD 0 0.0000 -4.2850 0.8015 -1.355 REMARK 600 15 CD1 C_ALI 3 -1.3435 -3.9206 -1.7884 -2.475 REMARK 600 16 HD11 H_ALI 0 0.4525 -5.0080 -1.8326 -2.536 REMARK 600 17 HD12 H_ALI 0 0.4525 -3.5225 -2.7953 -2.349 REMARK 600 18 HD13 H_ALI 0 0.4525 -3.5225 -1.3524 -3.392 REMARK 600 19 CD2 C_ALI 3 -1.3435 -4.1366 0.4702 -1.341 REMARK 600 20 HD21 H_ALI 0 0.4525 -5.2196 0.3800 -1.425 REMARK 600 21 HD22 H_ALI 0 0.4525 -3.7480 1.0051 -2.207 REMARK 600 22 HD23 H_ALI 0 0.4525 -3.8873 1.0195 -0.433 REMARK 600 23 QQD PSEUD 0 0.0000 -4.1513 -0.5960 -2.057 REMARK 600 24 C C_BYL 2 8.2024 -1.9587 1.4440 0.000 REMARK 600 25 O O_BYL 2 -7.0004 -1.1648 2.3835 0.000 REMARK 600 26 N N_AMI 2 -6.4912 -3.2772 1.5756 0.000 REMARK 600 REMARK 600 HERE IS THE STANDARD RESIDUE LIBRARY ENTRY FOR D-ISOLEUCINE REMARK 600 REMARK 600 THIS D AMINO ACID WAS GENERATED USING A PERL SCRIPT WHICH REMARK 600 CAN BE OBTAINED FROM THE AUTHOR. REMARK 600 REMARK 600 RESIDUE DILE 7 25 3 24 -45 REMARK 600 1 OMEGA -1 2 10.0000 2 1 3 4 0 REMARK 600 2 PHI 0 0 0.0000 1 3 5 23 0 REMARK 600 3 CHI1 1 3 1.3500 3 5 7 14 22 REMARK 600 4 CHI22 1 3 1.3500 5 7 10 11 13 REMARK 600 5 CHI21 1 3 1.3500 5 7 14 19 22 REMARK 600 6 CHI31 1 3 1.3500 7 14 19 20 22 REMARK 600 7 PSI 0 0 0.0000 3 5 23 25 0 REMARK 600 1 C C_BYL 2 8.2024 0.6824 -1.1357 0.000 REMARK 600 2 O O_BYL 2 -7.0004 0.1723 -2.2550 0.000 REMARK 600 3 N N_AMI 2 -6.4912 0.0000 0.0000 0.000 REMARK 600 4 HN H_AMI 0 3.2103 0.4226 0.9063 0.000 REMARK 600 5 CA C_ALI 3 1.1597 -1.4530 0.0000 0.000 REMARK 600 6 HA H_ALI 0 0.3677 -1.7797 -0.4805 0.922 REMARK 600 7 CB C_ALI 3 -0.0849 -1.9888 -0.8392 -1.161 REMARK 600 8 HB H_ALI 0 0.4525 -1.6625 -1.8692 -1.017 REMARK 600 9 QG2 PSEUD 0 0.0000 -1.2708 -0.2506 -2.811 REMARK 600 10 CG2 C_ALI 3 -1.3576 -1.4086 -0.3635 -2.495 REMARK 600 11 HG21 H_ALI 0 0.4525 -1.8059 -0.9770 -3.303 REMARK 600 12 HG22 H_ALI 0 0.4525 -0.3225 -0.4528 -2.471 REMARK 600 13 HG23 H_ALI 0 0.4525 -1.6840 0.6781 -2.660 REMARK 600 14 CG1 C_ALI 3 -0.3536 -3.5188 -0.8471 -1.172 REMARK 600 15 HG12 H_ALI 0 0.2687 -3.8906 0.1742 -1.255 REMARK 600 16 HG13 H_ALI 0 0.2687 -3.8906 -1.2463 -0.228 REMARK 600 17 QG1 PSEUD 0 0.0000 -3.8906 -0.5361 -0.742 REMARK 600 18 QD1 PSEUD 0 0.0000 -4.1818 -1.8856 -2.610 REMARK 600 19 CD1 C_ALI 3 -1.3576 -4.0546 -1.6863 -2.334 REMARK 600 20 HD11 H_ALI 0 0.4525 -5.1444 -1.6749 -2.318 REMARK 600 21 HD12 H_ALI 0 0.4525 -3.7005 -2.7124 -2.234 REMARK 600 22 HD13 H_ALI 0 0.4525 -3.7005 -1.2695 -3.277 REMARK 600 23 C C_BYL 2 8.2024 -1.9587 1.4440 0.000 REMARK 600 24 O O_BYL 2 -7.0004 -1.1648 2.3835 0.000 REMARK 600 25 N N_AMI 2 -6.4912 -3.2772 1.5756 0.000 REMARK 600 REMARK 600 HERE IS THE STANDARD RESIDUE LIBRARY ENTRY FOR D-ASPARTIC A REMARK 600 REMARK 600 THIS D AMINO ACID WAS GENERATED USING A PERL SCRIPT WHICH REMARK 600 CAN BE OBTAINED FROM THE AUTHOR. REMARK 600 REMARK 600 RESIDUE DASP 6 17 3 16 35 REMARK 600 1 OMEGA -1 2 10.0000 2 1 3 4 0 REMARK 600 2 PHI 0 0 0.0000 1 3 5 15 0 REMARK 600 3 CHI1 1 3 1.3500 3 5 7 11 14 REMARK 600 4 CHI2 0 0 0.0000 5 7 11 12 14 REMARK 600 5 CHI32 -1 2 4.0000 7 11 13 14 14 REMARK 600 6 PSI 0 0 0.0000 3 5 15 17 0 REMARK 600 1 C C_BYL 2 8.2024 0.6824 -1.1357 0.000 REMARK 600 2 O O_BYL 2 -7.0004 0.1723 -2.2550 0.000 REMARK 600 3 N N_AMI 2 -6.4912 0.0000 0.0000 0.000 REMARK 600 4 HN H_AMI 0 3.2103 0.4226 0.9063 0.000 REMARK 600 5 CA C_ALI 3 1.1597 -1.4530 0.0000 0.000 REMARK 600 6 HA H_ALI 0 0.3677 -1.7394 -0.5422 0.901 REMARK 600 7 CB C_ALI 3 -1.8243 -2.0038 -0.6938 -1.247 REMARK 600 8 HB2 H_ALI 0 1.1031 -1.6190 -1.7132 -1.277 REMARK 600 9 HB3 H_ALI 0 1.1031 -1.6190 -0.1818 -2.129 REMARK 600 10 QB PSEUD 0 0.0000 -1.6190 -0.9475 -1.703 REMARK 600 11 CG C_BYL 2 9.1075 -3.5302 -0.7444 -1.338 REMARK 600 12 OD1 O_BYL 2 -6.5620 -4.0951 -1.2810 -2.303 REMARK 600 13 OD2 O_HYD 2 -6.3781 -4.1537 -0.1955 -0.351 REMARK 600 14 HD2 H_OXY 0 4.0022 -5.1416 -0.2707 -0.486 REMARK 600 15 C C_BYL 2 8.2024 -1.9587 1.4440 0.000 REMARK 600 16 O O_BYL 2 -7.0004 -1.1648 2.3835 0.000 REMARK 600 17 N N_AMI 2 -6.4912 -3.2772 1.5756 0.000 REMARK 600 REMARK 600 HERE IS THE STANDARD RESIDUE LIBRARY ENTRY FOR D-GLUTAMIC A REMARK 600 REMARK 600 THIS D AMINO ACID WAS GENERATED USING A PERL SCRIPT WHICH REMARK 600 CAN BE OBTAINED FROM THE AUTHOR. REMARK 600 REMARK 600 RESIDUE DGLU 7 21 3 20 35 REMARK 600 1 OMEGA -1 2 10.0000 2 1 3 4 0 REMARK 600 2 PHI 0 0 0.0000 1 3 5 19 0 REMARK 600 3 CHI1 1 3 1.3500 3 5 7 11 18 REMARK 600 4 CHI2 1 3 1.3500 5 7 11 15 18 REMARK 600 5 CHI3 0 0 0.0000 7 11 15 16 18 REMARK 600 6 CHI42 -1 2 4.0000 11 15 17 18 18 REMARK 600 7 PSI 0 0 0.0000 3 5 19 21 0 REMARK 600 1 C C_BYL 2 8.2024 0.6824 -1.1357 0.000 REMARK 600 2 O O_BYL 2 -7.0004 0.1723 -2.2550 0.000 REMARK 600 3 N N_AMI 2 -6.4912 0.0000 0.0000 0.000 REMARK 600 4 HN H_AMI 0 3.2103 0.4226 0.9063 0.000 REMARK 600 5 CA C_ALI 3 1.1597 -1.4530 0.0000 0.000 REMARK 600 6 HA H_ALI 0 0.3677 -1.7427 -0.5017 0.923 REMARK 600 7 CB C_ALI 3 -0.5515 -2.0013 -0.7874 -1.191 REMARK 600 8 HB2 H_ALI 0 0.5515 -1.6341 -1.8130 -1.154 REMARK 600 9 HB3 H_ALI 0 0.5515 -1.6341 -0.3510 -2.120 REMARK 600 10 QB PSEUD 0 0.0000 -1.6341 -1.0820 -1.637 REMARK 600 11 CG C_ALI 3 -2.0082 -3.5313 -0.7874 -1.191 REMARK 600 12 HG2 H_ALI 0 1.0041 -3.8985 0.2382 -1.229 REMARK 600 13 HG3 H_ALI 0 1.0041 -3.8985 -1.2239 -0.262 REMARK 600 14 QG PSEUD 0 0.0000 -3.8985 -0.4928 -0.745 REMARK 600 15 CD C_BYL 2 9.1075 -4.0796 -1.5749 -2.383 REMARK 600 16 OE1 O_BYL 2 -6.5620 -5.3043 -1.6818 -2.545 REMARK 600 17 OE2 O_HYD 2 -6.3781 -3.1835 -2.0873 -3.157 REMARK 600 18 HE2 H_OXY 0 3.8325 -3.6219 -2.5827 -3.907 REMARK 600 19 C C_BYL 2 8.2024 -1.9838 1.4350 0.000 REMARK 600 20 O O_BYL 2 -7.0004 -1.2064 2.3882 0.000 REMARK 600 21 N N_AMI 2 -6.4912 -3.3043 1.5436 0.000 REMARK 600 REMARK 600 HERE IS THE STANDARD RESIDUE LIBRARY ENTRY FOR D-TYROSINE. REMARK 600 REMARK 600 THIS D AMINO ACID WAS GENERATED USING A PERL SCRIPT WHICH REMARK 600 CAN BE OBTAINED FROM THE AUTHOR. REMARK 600 REMARK 600 RESIDUE DTYR 6 28 3 27 13 REMARK 600 1 OMEGA -1 2 10.0000 2 1 3 4 0 REMARK 600 2 PHI 0 0 0.0000 1 3 5 26 0 REMARK 600 3 CHI1 1 3 1.3500 3 5 7 14 25 REMARK 600 4 CHI2 0 0 0.0000 5 7 14 15 25 REMARK 600 5 CHI6 -1 2 1.7500 17 19 24 25 25 REMARK 600 6 PSI 0 0 0.0000 3 5 26 28 0 REMARK 600 1 C C_BYL 2 8.2024 0.6824 -1.1357 0.000 REMARK 600 2 O O_BYL 2 -7.0004 0.1723 -2.2550 0.000 REMARK 600 3 N N_AMI 2 -6.4912 0.0000 0.0000 0.000 REMARK 600 4 HN H_AMI 0 3.2103 0.4226 0.9063 0.000 REMARK 600 5 CA C_ALI 3 1.1597 -1.4530 0.0000 0.000 REMARK 600 6 HA H_ALI 0 0.3677 -1.7894 -0.5104 0.902 REMARK 600 7 CB C_ALI 3 -0.7354 -1.8747 -0.6954 -1.295 REMARK 600 8 HB2 H_ALI 0 0.4525 -1.4494 -1.6989 -1.312 REMARK 600 9 HB3 H_ALI 0 0.4525 -1.4494 -0.1548 -2.141 REMARK 600 10 QB PSEUD 0 0.0000 -1.4494 -0.9269 -1.727 REMARK 600 11 QD PSEUD 0 0.0000 -3.5334 -0.8057 -1.501 REMARK 600 12 QE PSEUD 0 0.0000 -6.0510 -0.9730 -1.813 REMARK 600 13 QR PSEUD 0 0.0000 -4.7922 -0.8893 -1.657 REMARK 600 14 CG C_VIN 2 0.3677 -3.3898 -0.7961 -1.483 REMARK 600 15 CD1 C_ARO 2 -0.1838 -3.9068 -1.4012 -2.611 REMARK 600 16 HD1 H_ARO 0 0.1838 -3.2356 -1.8074 -3.367 REMARK 600 17 CE1 C_ARO 2 -1.0889 -5.3328 -1.4960 -2.787 REMARK 600 18 HE1 H_ARO 0 0.5515 -5.7543 -1.9713 -3.673 REMARK 600 19 CZ C_VIN 2 4.1012 -6.1417 -0.9790 -1.824 REMARK 600 20 CE2 C_ARO 2 -1.0889 -5.6654 -0.3767 -0.701 REMARK 600 21 HE2 H_ARO 0 0.5515 -6.3477 0.0253 0.047 REMARK 600 22 CD2 C_ARO 2 -0.1838 -4.2394 -0.2819 -0.525 REMARK 600 23 HD2 H_ARO 0 0.1838 -3.8311 0.1960 0.365 REMARK 600 24 OH O_HYD 3 -6.0100 -7.4885 -1.0685 -1.991 REMARK 600 25 HH H_OXY 0 2.9981 -7.9579 -0.6510 -1.213 REMARK 600 26 C C_BYL 2 8.2024 -2.0013 1.4284 0.000 REMARK 600 27 O O_BYL 2 -7.0004 -1.2356 2.3910 0.000 REMARK 600 28 N N_AMI 2 -6.4912 -3.3231 1.5208 0.000 SEQRES 1 A 13 DCY DTY DLY DLE DAL DGL GLY DAS DLY DTY DTY DIL CYS MODRES 2XBH DCY A 1 CYS D-CYSTEINE MODRES 2XBH DTY A 2 TYR D-TYROSINE MODRES 2XBH DLY A 3 LYS D-LYSINE MODRES 2XBH DLE A 4 LEU D-LEUCINE MODRES 2XBH DAL A 5 ALA D-ALANINE MODRES 2XBH DGL A 6 GLU D-GLUTAMIC ACID MODRES 2XBH DAS A 8 ASP D-ASPARTIC ACID MODRES 2XBH DLY A 9 LYS D-LYSINE MODRES 2XBH DTY A 10 TYR D-TYROSINE MODRES 2XBH DTY A 11 TYR D-TYROSINE MODRES 2XBH DIL A 12 ILE D-ISOLEUCINE HET DCY A 1 10 HET DTY A 2 21 HET DLY A 3 22 HET DLE A 4 19 HET DAL A 5 10 HET DGL A 6 15 HET DAS A 8 12 HET DLY A 9 22 HET DTY A 10 21 HET DTY A 11 21 HET DIL A 12 19 HETNAM DCY D-CYSTEINE HETNAM DTY D-TYROSINE HETNAM DLY D-LYSINE HETNAM DLE D-LEUCINE HETNAM DAL D-ALANINE HETNAM DGL D-GLUTAMIC ACID HETNAM DAS D-ASPARTIC ACID HETNAM DIL D-ISOLEUCINE FORMUL 1 DCY C3 H7 N O2 S FORMUL 1 DTY 3(C9 H11 N O3) FORMUL 1 DLY 2(C6 H14 N2 O2) FORMUL 1 DLE C6 H13 N O2 FORMUL 1 DAL C3 H7 N O2 FORMUL 1 DGL C5 H9 N O4 FORMUL 1 DAS C4 H7 N O4 FORMUL 1 DIL C6 H13 N O2 SHEET 1 A 2 DTY A 2 DAL A 5 0 SHEET 2 A 2 DAS A 8 DTY A 11 -1 O DAS A 8 N DAL A 5 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 HETATM 1 N DCY A 1 1.757 -5.549 -6.749 1.00 0.00 N HETATM 2 CA DCY A 1 1.879 -6.742 -5.928 1.00 0.00 C HETATM 3 C DCY A 1 1.407 -6.401 -4.513 1.00 0.00 C HETATM 4 O DCY A 1 2.124 -6.638 -3.541 1.00 0.00 O HETATM 5 CB DCY A 1 1.101 -7.918 -6.521 1.00 0.00 C HETATM 6 SG DCY A 1 2.061 -8.972 -7.670 1.00 0.00 S HETATM 7 H DCY A 1 0.895 -5.465 -7.246 1.00 0.00 H HETATM 8 HA DCY A 1 2.934 -7.016 -5.928 1.00 0.00 H HETATM 9 HB1 DCY A 1 0.230 -7.532 -7.048 1.00 0.00 H HETATM 10 HB2 DCY A 1 0.731 -8.539 -5.705 1.00 0.00 H HETATM 11 N DTY A 2 0.204 -5.851 -4.441 1.00 0.00 N HETATM 12 CA DTY A 2 -0.372 -5.475 -3.162 1.00 0.00 C HETATM 13 C DTY A 2 -1.092 -4.129 -3.258 1.00 0.00 C HETATM 14 O DTY A 2 -2.187 -4.045 -3.813 1.00 0.00 O HETATM 15 CB DTY A 2 -1.393 -6.563 -2.823 1.00 0.00 C HETATM 16 CG DTY A 2 -0.778 -7.945 -2.598 1.00 0.00 C HETATM 17 CD1 DTY A 2 -0.756 -8.867 -3.625 1.00 0.00 C HETATM 18 CD2 DTY A 2 -0.246 -8.271 -1.367 1.00 0.00 C HETATM 19 CE1 DTY A 2 -0.176 -10.168 -3.412 1.00 0.00 C HETATM 20 CE2 DTY A 2 0.334 -9.573 -1.154 1.00 0.00 C HETATM 21 CZ DTY A 2 0.340 -10.457 -2.188 1.00 0.00 C HETATM 22 OH DTY A 2 0.886 -11.686 -1.987 1.00 0.00 O HETATM 23 H DTY A 2 -0.372 -5.661 -5.235 1.00 0.00 H HETATM 24 HA DTY A 2 0.440 -5.394 -2.438 1.00 0.00 H HETATM 25 HB1 DTY A 2 -2.121 -6.628 -3.631 1.00 0.00 H HETATM 26 HB2 DTY A 2 -1.938 -6.269 -1.927 1.00 0.00 H HETATM 27 HD1 DTY A 2 -1.176 -8.609 -4.597 1.00 0.00 H HETATM 28 HD2 DTY A 2 -0.264 -7.543 -0.555 1.00 0.00 H HETATM 29 HE1 DTY A 2 -0.153 -10.905 -4.216 1.00 0.00 H HETATM 30 HE2 DTY A 2 0.757 -9.843 -0.187 1.00 0.00 H HETATM 31 HH DTY A 2 0.995 -11.856 -1.008 1.00 0.00 H HETATM 32 N DLY A 3 -0.448 -3.109 -2.709 1.00 0.00 N HETATM 33 CA DLY A 3 -1.014 -1.770 -2.727 1.00 0.00 C HETATM 34 C DLY A 3 -0.223 -0.875 -1.771 1.00 0.00 C HETATM 35 O DLY A 3 1.007 -0.895 -1.771 1.00 0.00 O HETATM 36 CB DLY A 3 -1.079 -1.235 -4.159 1.00 0.00 C HETATM 37 CG DLY A 3 -1.542 0.223 -4.178 1.00 0.00 C HETATM 38 CD DLY A 3 -0.353 1.178 -4.055 1.00 0.00 C HETATM 39 CE DLY A 3 0.140 1.622 -5.433 1.00 0.00 C HETATM 40 NZ DLY A 3 -0.729 2.690 -5.976 1.00 0.00 N HETATM 41 H DLY A 3 0.441 -3.185 -2.260 1.00 0.00 H HETATM 42 HA DLY A 3 -2.038 -1.844 -2.363 1.00 0.00 H HETATM 43 HB1 DLY A 3 -1.762 -1.845 -4.749 1.00 0.00 H HETATM 44 HB2 DLY A 3 -0.097 -1.314 -4.626 1.00 0.00 H HETATM 45 HG1 DLY A 3 -2.240 0.398 -3.359 1.00 0.00 H HETATM 46 HG2 DLY A 3 -2.081 0.425 -5.104 1.00 0.00 H HETATM 47 HD1 DLY A 3 0.458 0.688 -3.515 1.00 0.00 H HETATM 48 HD2 DLY A 3 -0.642 2.051 -3.469 1.00 0.00 H HETATM 49 HE1 DLY A 3 0.148 0.770 -6.114 1.00 0.00 H HETATM 50 HE2 DLY A 3 1.166 1.981 -5.361 1.00 0.00 H HETATM 51 HZ1 DLY A 3 -0.321 3.059 -6.810 1.00 0.00 H HETATM 52 HZ2 DLY A 3 -0.822 3.420 -5.298 1.00 0.00 H HETATM 53 3HZ DLY A 3 -1.631 2.312 -6.184 1.00 0.00 H HETATM 54 N DLE A 4 -0.962 -0.110 -0.980 1.00 0.00 N HETATM 55 CA DLE A 4 -0.344 0.790 -0.022 1.00 0.00 C HETATM 56 CB DLE A 4 0.129 0.019 1.212 1.00 0.00 C HETATM 57 CG DLE A 4 -0.900 -0.153 2.332 1.00 0.00 C HETATM 58 CD1 DLE A 4 -0.949 1.088 3.225 1.00 0.00 C HETATM 59 CD2 DLE A 4 -0.629 -1.427 3.134 1.00 0.00 C HETATM 60 C DLE A 4 -1.315 1.928 0.301 1.00 0.00 C HETATM 61 O DLE A 4 -2.386 1.696 0.860 1.00 0.00 O HETATM 62 H DLE A 4 -1.961 -0.100 -0.987 1.00 0.00 H HETATM 63 HA DLE A 4 0.541 1.215 -0.495 1.00 0.00 H HETATM 64 HB1 DLE A 4 1.001 0.528 1.622 1.00 0.00 H HETATM 65 HB2 DLE A 4 0.458 -0.970 0.893 1.00 0.00 H HETATM 66 HG DLE A 4 -1.885 -0.262 1.877 1.00 0.00 H HETATM 67 HD11 DLE A 4 -0.370 1.889 2.767 1.00 0.00 H HETATM 68 HD12 DLE A 4 -0.531 0.849 4.203 1.00 0.00 H HETATM 69 HD13 DLE A 4 -1.984 1.410 3.342 1.00 0.00 H HETATM 70 HD21 DLE A 4 -1.458 -2.122 3.002 1.00 0.00 H HETATM 71 HD22 DLE A 4 -0.529 -1.176 4.190 1.00 0.00 H HETATM 72 HD23 DLE A 4 0.293 -1.889 2.782 1.00 0.00 H HETATM 73 N DAL A 5 -0.907 3.134 -0.066 1.00 0.00 N HETATM 74 CA DAL A 5 -1.728 4.309 0.176 1.00 0.00 C HETATM 75 CB DAL A 5 -2.679 4.520 -1.003 1.00 0.00 C HETATM 76 C DAL A 5 -0.821 5.518 0.418 1.00 0.00 C HETATM 77 O DAL A 5 0.262 5.382 0.984 1.00 0.00 O HETATM 78 H DAL A 5 -0.035 3.314 -0.522 1.00 0.00 H HETATM 79 HA DAL A 5 -2.317 4.122 1.074 1.00 0.00 H HETATM 80 HB1 DAL A 5 -3.637 4.885 -0.636 1.00 0.00 H HETATM 81 HB2 DAL A 5 -2.826 3.574 -1.525 1.00 0.00 H HETATM 82 HB3 DAL A 5 -2.250 5.250 -1.690 1.00 0.00 H HETATM 83 N DGL A 6 -1.298 6.672 -0.024 1.00 0.00 N HETATM 84 CA DGL A 6 -0.545 7.903 0.137 1.00 0.00 C HETATM 85 C DGL A 6 0.906 7.701 -0.305 1.00 0.00 C HETATM 86 O DGL A 6 1.790 7.501 0.527 1.00 0.00 O HETATM 87 CB DGL A 6 -1.198 9.051 -0.635 1.00 0.00 C HETATM 88 CG DGL A 6 -1.680 10.148 0.316 1.00 0.00 C HETATM 89 CD DGL A 6 -1.365 11.536 -0.243 1.00 0.00 C HETATM 90 OE1 DGL A 6 -2.337 12.289 -0.474 1.00 0.00 O HETATM 91 OE2 DGL A 6 -0.161 11.815 -0.428 1.00 0.00 O HETATM 92 H DGL A 6 -2.180 6.773 -0.484 1.00 0.00 H HETATM 93 HA DGL A 6 -0.578 8.126 1.205 1.00 0.00 H HETATM 94 HB1 DGL A 6 -2.039 8.672 -1.215 1.00 0.00 H HETATM 95 HB2 DGL A 6 -0.484 9.469 -1.345 1.00 0.00 H HETATM 96 HG1 DGL A 6 -1.204 10.027 1.289 1.00 0.00 H HETATM 97 HG2 DGL A 6 -2.754 10.051 0.473 1.00 0.00 H