HEADER PROTEIN BINDING 22-APR-10 2XCB TITLE CRYSTAL STRUCTURE OF PCRH IN COMPLEX WITH THE CHAPERONE TITLE 2 BINDING REGION OF POPD COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATORY PROTEIN PCRH; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 21-160; COMPND 5 SYNONYM: PCRH; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPD; COMPND 9 CHAIN: C; COMPND 10 FRAGMENT: CHAPERONE BINDING DOMAIN, RESIDUES 47-56; COMPND 11 SYNONYM: POPD SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 STRAIN: CHA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET DUET 1; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 12 ORGANISM_TAXID: 287; SOURCE 13 STRAIN: CHA KEYWDS PROTEIN TRANSPORT, BACTERIAL TOXIN, TYPE III SECRETION, KEYWDS 2 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR V.JOB,P.-J.MATTEI,D.LEMAIRE,I.ATTREE,A.DESSEN REVDAT 3 03-OCT-12 2XCB 1 REMARK VERSN REVDAT 2 28-JUL-10 2XCB 1 JRNL REVDAT 1 05-MAY-10 2XCB 0 JRNL AUTH V.JOB,P.-J.MATTEI,D.LEMAIRE,I.ATTREE,A.DESSEN JRNL TITL STRUCTURAL BASIS OF CHAPERONE RECOGNITION OF TYPE JRNL TITL 2 III SECRETION SYSTEM MINOR TRANSLOCATOR PROTEINS. JRNL REF J.BIOL.CHEM. V. 285 23224 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20385547 JRNL DOI 10.1074/JBC.M110.111278 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 99.91 REMARK 3 NUMBER OF REFLECTIONS : 25212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.23319 REMARK 3 R VALUE (WORKING SET) : 0.22991 REMARK 3 FREE R VALUE : 0.26218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.1 REMARK 3 FREE R VALUE TEST SET COUNT : 2826 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.850 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.898 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1811 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.355 REMARK 3 BIN FREE R VALUE SET COUNT : 201 REMARK 3 BIN FREE R VALUE : 0.401 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2193 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 95 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.706 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.511 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.33 REMARK 3 B22 (A**2) : 2.66 REMARK 3 B33 (A**2) : -2.33 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.167 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.152 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.574 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2259 ; 0.021 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3079 ; 1.731 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 305 ; 4.995 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;40.339 ;24.390 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 357 ;17.109 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;19.319 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 318 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1825 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1407 ; 1.075 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2199 ; 1.897 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 852 ; 3.175 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 863 ; 4.826 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 27 A 157 6 REMARK 3 1 B 27 B 157 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 962 ; 0.63 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 B (A): 962 ; 0.63 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 962 ; 6.59 ; 10.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 962 ; 6.59 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2XCB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-APR-10. REMARK 100 THE PDBE ID CODE IS EBI-43653. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 4) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26728 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.85 REMARK 200 RESOLUTION RANGE LOW (A) : 50.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 14 REMARK 200 R MERGE (I) : 0.07 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.19 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 14 REMARK 200 R MERGE FOR SHELL (I) : 0.70 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.5 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH 8.0, 1.5 M REMARK 280 LICL, 16% PEG6000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 22.18500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.86000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.18500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.86000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -22.18500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 48.86000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -73.59000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 19 REMARK 465 SER A 20 REMARK 465 ASP A 21 REMARK 465 GLY A 22 REMARK 465 GLY A 23 REMARK 465 THR A 24 REMARK 465 LEU A 25 REMARK 465 ALA A 26 REMARK 465 ARG A 160 REMARK 465 GLY B 19 REMARK 465 SER B 20 REMARK 465 ASP B 21 REMARK 465 GLY B 22 REMARK 465 GLY B 23 REMARK 465 THR B 24 REMARK 465 ARG B 157 REMARK 465 LYS B 158 REMARK 465 ASP B 159 REMARK 465 ARG B 160 REMARK 465 ASP C 47 REMARK 465 GLN C 56 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 27 CG SD CE REMARK 470 LEU B 25 CG CD1 CD2 REMARK 470 VAL B 154 CG1 CG2 REMARK 470 ARG C 48 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE2 TYR B 68 O HOH B 2015 2.11 REMARK 500 OH TYR B 68 O HOH B 2015 2.05 REMARK 500 O HOH A 2028 O HOH A 2030 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CG LYS B 51 O HOH A 2001 4554 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 54 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 119 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO C 54 -115.27 -72.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B1157 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XCC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PCRH FROM PSEUDOMONAS REMARK 900 AERUGINOSA DBREF 2XCB A 21 160 UNP Q9I325 Q9I325_PSEAE 21 160 DBREF 2XCB B 21 160 UNP Q9I325 Q9I325_PSEAE 21 160 DBREF 2XCB C 47 56 UNP O50280 O50280_PSEAE 47 56 SEQADV 2XCB GLY A 19 UNP Q9I325 EXPRESSION TAG SEQADV 2XCB SER A 20 UNP Q9I325 EXPRESSION TAG SEQADV 2XCB GLY B 19 UNP Q9I325 EXPRESSION TAG SEQADV 2XCB SER B 20 UNP Q9I325 EXPRESSION TAG SEQRES 1 A 142 GLY SER ASP GLY GLY THR LEU ALA MET LEU ARG GLY LEU SEQRES 2 A 142 SER GLU ASP THR LEU GLU GLN LEU TYR ALA LEU GLY PHE SEQRES 3 A 142 ASN GLN TYR GLN ALA GLY LYS TRP ASP ASP ALA GLN LYS SEQRES 4 A 142 ILE PHE GLN ALA LEU CYS MET LEU ASP HIS TYR ASP ALA SEQRES 5 A 142 ARG TYR PHE LEU GLY LEU GLY ALA CYS ARG GLN SER LEU SEQRES 6 A 142 GLY LEU TYR GLU GLN ALA LEU GLN SER TYR SER TYR GLY SEQRES 7 A 142 ALA LEU MET ASP ILE ASN GLU PRO ARG PHE PRO PHE HIS SEQRES 8 A 142 ALA ALA GLU CYS HIS LEU GLN LEU GLY ASP LEU ASP GLY SEQRES 9 A 142 ALA GLU SER GLY PHE TYR SER ALA ARG ALA LEU ALA ALA SEQRES 10 A 142 ALA GLN PRO ALA HIS GLU ALA LEU ALA ALA ARG ALA GLY SEQRES 11 A 142 ALA MET LEU GLU ALA VAL THR ALA ARG LYS ASP ARG SEQRES 1 B 142 GLY SER ASP GLY GLY THR LEU ALA MET LEU ARG GLY LEU SEQRES 2 B 142 SER GLU ASP THR LEU GLU GLN LEU TYR ALA LEU GLY PHE SEQRES 3 B 142 ASN GLN TYR GLN ALA GLY LYS TRP ASP ASP ALA GLN LYS SEQRES 4 B 142 ILE PHE GLN ALA LEU CYS MET LEU ASP HIS TYR ASP ALA SEQRES 5 B 142 ARG TYR PHE LEU GLY LEU GLY ALA CYS ARG GLN SER LEU SEQRES 6 B 142 GLY LEU TYR GLU GLN ALA LEU GLN SER TYR SER TYR GLY SEQRES 7 B 142 ALA LEU MET ASP ILE ASN GLU PRO ARG PHE PRO PHE HIS SEQRES 8 B 142 ALA ALA GLU CYS HIS LEU GLN LEU GLY ASP LEU ASP GLY SEQRES 9 B 142 ALA GLU SER GLY PHE TYR SER ALA ARG ALA LEU ALA ALA SEQRES 10 B 142 ALA GLN PRO ALA HIS GLU ALA LEU ALA ALA ARG ALA GLY SEQRES 11 B 142 ALA MET LEU GLU ALA VAL THR ALA ARG LYS ASP ARG SEQRES 1 C 10 ASP ARG VAL GLU LEU ASN ALA PRO ARG GLN HET NO3 B1157 4 HETNAM NO3 NITRATE ION FORMUL 4 NO3 N O3 1- FORMUL 5 HOH *95(H2 O) HELIX 1 1 SER A 32 ALA A 49 1 18 HELIX 2 2 LYS A 51 ASP A 66 1 16 HELIX 3 3 ASP A 69 LEU A 83 1 15 HELIX 4 4 LEU A 85 ASP A 100 1 16 HELIX 5 5 PRO A 104 LEU A 117 1 14 HELIX 6 6 ASP A 119 ALA A 136 1 18 HELIX 7 7 GLN A 137 ALA A 139 5 3 HELIX 8 8 HIS A 140 ASP A 159 1 20 HELIX 9 9 SER B 32 ALA B 49 1 18 HELIX 10 10 LYS B 51 ASP B 66 1 16 HELIX 11 11 ASP B 69 LEU B 83 1 15 HELIX 12 12 LEU B 85 ASP B 100 1 16 HELIX 13 13 PRO B 104 LEU B 117 1 14 HELIX 14 14 ASP B 119 ALA B 136 1 18 HELIX 15 15 GLN B 137 GLU B 141 5 5 HELIX 16 16 ALA B 142 ALA B 156 1 15 SITE 1 AC1 9 HIS A 67 TYR A 68 GLN B 60 CYS B 63 SITE 2 AC1 9 MET B 64 PHE B 73 LEU B 76 HOH B2035 SITE 3 AC1 9 HOH B2036 CRYST1 44.370 97.720 73.590 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022538 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010233 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013589 0.00000