HEADER TRANSPORT PROTEIN 10-MAY-10 2XE3 TITLE OMPC28 COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PORIN C; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OMPC, OUTER MEMBRANE PROTEIN C; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: O6; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 OTHER_DETAILS: CLINICAL ISOLATE KEYWDS CELL MEMBRANE, TRANSPORT PROTEIN, ION TRANSPORT, PORIN EXPDTA X-RAY DIFFRACTION AUTHOR H.LOU,J.H.NAISMITH REVDAT 5 20-DEC-23 2XE3 1 HETSYN REVDAT 4 29-JUL-20 2XE3 1 COMPND REMARK HETNAM SITE REVDAT 3 16-NOV-11 2XE3 1 JRNL REVDAT 2 13-JUL-11 2XE3 1 VERSN REVDAT 1 19-MAY-10 2XE3 0 JRNL AUTH H.LOU,M.CHEN,S.S.BLACK,S.R.BUSHELL,M.CECCARELLI,T.MACH, JRNL AUTH 2 K.BEIS,A.S.LOW,V.A.BAMFORD,I.R.BOOTH,H.BAYLEY,J.H.NAISMITH JRNL TITL ALTERED ANTIBIOTIC TRANSPORT IN OMPC MUTANTS ISOLATED FROM A JRNL TITL 2 SERIES OF CLINICAL STRAINS OF MULTI-DRUG RESISTANT E. COLI. JRNL REF PLOS ONE V. 6 25825 2011 JRNL REFN ESSN 1932-6203 JRNL PMID 22053181 JRNL DOI 10.1371/JOURNAL.PONE.0025825 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 24149 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1301 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1790 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5430 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 30 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.81000 REMARK 3 B22 (A**2) : 1.81000 REMARK 3 B33 (A**2) : -2.72000 REMARK 3 B12 (A**2) : 0.91000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.005 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.328 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.254 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.482 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5594 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3622 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7568 ; 0.921 ; 1.931 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8728 ; 0.725 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 684 ; 5.648 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 322 ;34.621 ;24.969 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 840 ;13.003 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;13.730 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 760 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6528 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1264 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 343 REMARK 3 ORIGIN FOR THE GROUP (A): -34.1540 -16.7290 1.3390 REMARK 3 T TENSOR REMARK 3 T11: 0.0985 T22: 0.1060 REMARK 3 T33: 0.1960 T12: -0.0878 REMARK 3 T13: -0.0593 T23: 0.0226 REMARK 3 L TENSOR REMARK 3 L11: 2.8357 L22: 2.4507 REMARK 3 L33: 1.7081 L12: -0.2400 REMARK 3 L13: -0.3718 L23: -0.3198 REMARK 3 S TENSOR REMARK 3 S11: -0.0574 S12: -0.1284 S13: 0.3721 REMARK 3 S21: 0.0673 S22: -0.1265 S23: -0.4840 REMARK 3 S31: -0.3314 S32: 0.3564 S33: 0.1839 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 343 REMARK 3 ORIGIN FOR THE GROUP (A): -36.5800 -13.9710 56.9320 REMARK 3 T TENSOR REMARK 3 T11: 0.0807 T22: 0.0900 REMARK 3 T33: 0.1819 T12: -0.0326 REMARK 3 T13: -0.0303 T23: 0.0505 REMARK 3 L TENSOR REMARK 3 L11: 2.4060 L22: 2.5420 REMARK 3 L33: 0.7531 L12: 0.0835 REMARK 3 L13: 0.4456 L23: 0.3640 REMARK 3 S TENSOR REMARK 3 S11: -0.1156 S12: -0.0104 S13: 0.4089 REMARK 3 S21: -0.0240 S22: -0.0505 S23: -0.3756 REMARK 3 S31: -0.1899 S32: 0.1533 S33: 0.1661 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 2XE3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1290043888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24149 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 2.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.00 REMARK 200 R MERGE FOR SHELL (I) : 0.74000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2XE1 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 93.24600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 93.24600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 93.24600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -103.48900 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -51.74450 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -89.62410 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -103.48900 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -51.74450 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -89.62410 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2003 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2001 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 7 52.34 37.37 REMARK 500 ALA A 76 96.63 -167.02 REMARK 500 GLU A 109 -49.34 -133.65 REMARK 500 ASN A 119 65.70 -118.21 REMARK 500 PHE A 120 -134.80 55.18 REMARK 500 GLN A 123 -132.75 -150.01 REMARK 500 PHE A 136 71.33 37.43 REMARK 500 ASP A 287 -132.03 62.63 REMARK 500 LYS A 293 109.17 -165.52 REMARK 500 ASP B 7 52.48 37.57 REMARK 500 ALA B 76 96.46 -166.37 REMARK 500 GLU B 109 -49.27 -133.78 REMARK 500 ASN B 119 65.74 -118.46 REMARK 500 PHE B 120 -135.16 55.56 REMARK 500 GLN B 123 -133.08 -150.24 REMARK 500 PHE B 136 71.06 37.81 REMARK 500 LYS B 152 128.28 -39.81 REMARK 500 ASP B 287 -132.31 62.79 REMARK 500 LYS B 293 109.31 -165.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XE2 RELATED DB: PDB REMARK 900 MOLECULAR INSIGHTS INTO CLINICALLY ISOLATED OMPC20 MUTANTS AND REMARK 900 THEIR ROLE IN MULTI- DRUG RESISTANCE REMARK 900 RELATED ID: 2IXW RELATED DB: PDB REMARK 900 STRUCTURAL BASIS FOR OMPC MEDIATED ANTIBIOTIC RESISTANCE IN REMARK 900 CLINICAL ISOLATES OF ESCHERICHIA COLI. REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS IS FROM A CLINICAL SEQUENCE DESCRIBED IN REMARK 999 PUBMED ID: 11722730. A.S.LOW,F.M.MACKENZIE,I.M.GOULD, REMARK 999 I.R.BOOTH. PROTECTED ENVIRONMENTS ALLOW PARALLEL EVOLUTION REMARK 999 OF A BACTERIAL PATHOGEN IN A PATIENT SUBJECTED TO REMARK 999 LONG-TERM ANTIBIOTIC THERAPY. MOL.MICROBIOL. 42,619 DBREF 2XE3 A 1 343 UNP Q9K597 Q9K597_ECOLX 22 364 DBREF 2XE3 B 1 343 UNP Q9K597 Q9K597_ECOLX 22 364 SEQADV 2XE3 GLU A 18 UNP Q9K597 ASP 39 SEE REMARK 999 SEQADV 2XE3 PHE A 271 UNP Q9K597 SER 292 SEE REMARK 999 SEQADV 2XE3 GLU B 18 UNP Q9K597 ASP 39 SEE REMARK 999 SEQADV 2XE3 PHE B 271 UNP Q9K597 SER 292 SEE REMARK 999 SEQRES 1 A 343 ALA GLU ILE TYR ASN LYS ASP GLY ASN LYS LEU ASP LEU SEQRES 2 A 343 TYR GLY LYS VAL GLU GLY LEU HIS TYR PHE SER ASP ASN SEQRES 3 A 343 ASP SER LYS ASP GLY ASP LYS THR TYR MET ARG LEU GLY SEQRES 4 A 343 PHE LYS GLY GLU THR GLN VAL THR ASP GLN LEU THR GLY SEQRES 5 A 343 TYR GLY GLN TRP GLU TYR GLN ILE GLN GLY ASN GLU PRO SEQRES 6 A 343 GLU SER ASP ASN SER SER TRP THR ARG VAL ALA PHE ALA SEQRES 7 A 343 GLY LEU LYS PHE GLN ASP VAL GLY SER PHE ASP TYR GLY SEQRES 8 A 343 ARG ASN TYR GLY VAL VAL TYR ASP VAL THR SER TRP THR SEQRES 9 A 343 ASP VAL LEU PRO GLU PHE GLY GLY ASP THR TYR ASP SER SEQRES 10 A 343 ASP ASN PHE MET GLN GLN ARG GLY ASN GLY PHE ALA THR SEQRES 11 A 343 TYR ARG ASN THR ASP PHE PHE GLY LEU VAL ASP GLY LEU SEQRES 12 A 343 ASP PHE ALA VAL GLN TYR GLN GLY LYS ASN GLY SER ALA SEQRES 13 A 343 HIS GLY GLU GLY MET THR THR ASN GLY ARG ASP ASP VAL SEQRES 14 A 343 PHE GLU GLN ASN GLY ASP GLY VAL GLY GLY SER ILE THR SEQRES 15 A 343 TYR ASN TYR GLU GLY PHE GLY ILE GLY ALA ALA VAL SER SEQRES 16 A 343 SER SER LYS ARG THR TRP ASP GLN ASN ASN THR GLY LEU SEQRES 17 A 343 ILE GLY THR GLY ASP ARG ALA GLU THR TYR THR GLY GLY SEQRES 18 A 343 LEU LYS TYR ASP ALA ASN ASN ILE TYR LEU ALA ALA GLN SEQRES 19 A 343 TYR THR GLN THR TYR ASN ALA THR ARG VAL GLY SER LEU SEQRES 20 A 343 GLY TRP ALA ASN LYS ALA GLN ASN PHE GLU ALA VAL ALA SEQRES 21 A 343 GLN TYR GLN PHE ASP PHE GLY LEU ARG PRO PHE LEU ALA SEQRES 22 A 343 TYR LEU GLN SER LYS GLY LYS ASN LEU GLY ARG GLY TYR SEQRES 23 A 343 ASP ASP GLU ASP ILE LEU LYS TYR VAL ASP VAL GLY ALA SEQRES 24 A 343 THR TYR TYR PHE ASN LYS ASN MET SER THR TYR VAL ASP SEQRES 25 A 343 TYR LYS ILE ASN LEU LEU ASP ASP ASN ARG PHE THR ARG SEQRES 26 A 343 ASP ALA GLY ILE ASN THR ASP ASP ILE VAL ALA LEU GLY SEQRES 27 A 343 LEU VAL TYR GLN PHE SEQRES 1 B 343 ALA GLU ILE TYR ASN LYS ASP GLY ASN LYS LEU ASP LEU SEQRES 2 B 343 TYR GLY LYS VAL GLU GLY LEU HIS TYR PHE SER ASP ASN SEQRES 3 B 343 ASP SER LYS ASP GLY ASP LYS THR TYR MET ARG LEU GLY SEQRES 4 B 343 PHE LYS GLY GLU THR GLN VAL THR ASP GLN LEU THR GLY SEQRES 5 B 343 TYR GLY GLN TRP GLU TYR GLN ILE GLN GLY ASN GLU PRO SEQRES 6 B 343 GLU SER ASP ASN SER SER TRP THR ARG VAL ALA PHE ALA SEQRES 7 B 343 GLY LEU LYS PHE GLN ASP VAL GLY SER PHE ASP TYR GLY SEQRES 8 B 343 ARG ASN TYR GLY VAL VAL TYR ASP VAL THR SER TRP THR SEQRES 9 B 343 ASP VAL LEU PRO GLU PHE GLY GLY ASP THR TYR ASP SER SEQRES 10 B 343 ASP ASN PHE MET GLN GLN ARG GLY ASN GLY PHE ALA THR SEQRES 11 B 343 TYR ARG ASN THR ASP PHE PHE GLY LEU VAL ASP GLY LEU SEQRES 12 B 343 ASP PHE ALA VAL GLN TYR GLN GLY LYS ASN GLY SER ALA SEQRES 13 B 343 HIS GLY GLU GLY MET THR THR ASN GLY ARG ASP ASP VAL SEQRES 14 B 343 PHE GLU GLN ASN GLY ASP GLY VAL GLY GLY SER ILE THR SEQRES 15 B 343 TYR ASN TYR GLU GLY PHE GLY ILE GLY ALA ALA VAL SER SEQRES 16 B 343 SER SER LYS ARG THR TRP ASP GLN ASN ASN THR GLY LEU SEQRES 17 B 343 ILE GLY THR GLY ASP ARG ALA GLU THR TYR THR GLY GLY SEQRES 18 B 343 LEU LYS TYR ASP ALA ASN ASN ILE TYR LEU ALA ALA GLN SEQRES 19 B 343 TYR THR GLN THR TYR ASN ALA THR ARG VAL GLY SER LEU SEQRES 20 B 343 GLY TRP ALA ASN LYS ALA GLN ASN PHE GLU ALA VAL ALA SEQRES 21 B 343 GLN TYR GLN PHE ASP PHE GLY LEU ARG PRO PHE LEU ALA SEQRES 22 B 343 TYR LEU GLN SER LYS GLY LYS ASN LEU GLY ARG GLY TYR SEQRES 23 B 343 ASP ASP GLU ASP ILE LEU LYS TYR VAL ASP VAL GLY ALA SEQRES 24 B 343 THR TYR TYR PHE ASN LYS ASN MET SER THR TYR VAL ASP SEQRES 25 B 343 TYR LYS ILE ASN LEU LEU ASP ASP ASN ARG PHE THR ARG SEQRES 26 B 343 ASP ALA GLY ILE ASN THR ASP ASP ILE VAL ALA LEU GLY SEQRES 27 B 343 LEU VAL TYR GLN PHE HET BOG A1344 20 HET BOG B1344 20 HETNAM BOG OCTYL BETA-D-GLUCOPYRANOSIDE HETSYN BOG BETA-OCTYLGLUCOSIDE; OCTYL BETA-D-GLUCOSIDE; OCTYL D- HETSYN 2 BOG GLUCOSIDE; OCTYL GLUCOSIDE FORMUL 3 BOG 2(C14 H28 O6) FORMUL 5 HOH *30(H2 O) HELIX 1 1 ASN A 26 ASP A 30 5 5 HELIX 2 2 VAL A 97 SER A 102 1 6 HELIX 3 3 THR A 134 LEU A 139 1 6 HELIX 4 4 ASP A 168 GLN A 172 5 5 HELIX 5 5 TRP A 201 ASN A 205 5 5 HELIX 6 6 ASN A 321 GLY A 328 1 8 HELIX 7 7 ASN B 26 ASP B 30 5 5 HELIX 8 8 VAL B 97 SER B 102 1 6 HELIX 9 9 THR B 134 LEU B 139 1 6 HELIX 10 10 ASP B 168 GLN B 172 5 5 HELIX 11 11 TRP B 201 ASN B 205 5 5 HELIX 12 12 ASN B 321 GLY B 328 1 8 SHEET 1 A19 GLU A 2 LYS A 6 0 SHEET 2 A19 GLY A 31 ASP A 32 0 SHEET 3 A19 TYR A 35 GLN A 45 0 SHEET 4 A19 LEU A 50 GLN A 61 -1 O GLY A 52 N THR A 44 SHEET 5 A19 SER A 71 PHE A 82 -1 O TRP A 72 N GLN A 59 SHEET 6 A19 GLY A 86 TYR A 94 -1 O ARG A 92 N ALA A 76 SHEET 7 A19 ARG A 124 ASN A 133 -1 O THR A 130 N ASP A 89 SHEET 8 A19 LEU A 143 GLN A 150 -1 O TYR A 149 N ALA A 129 SHEET 9 A19 GLY A 176 TYR A 185 -1 O THR A 182 N ASP A 144 SHEET 10 A19 PHE A 188 LYS A 198 -1 O SER A 196 N VAL A 177 SHEET 11 A19 ARG A 214 ALA A 226 -1 O ALA A 215 N SER A 197 SHEET 12 A19 ILE A 229 TYR A 239 -1 O TYR A 235 N GLY A 220 SHEET 13 A19 LYS A 252 TYR A 262 -1 O ASN A 255 N THR A 236 SHEET 14 A19 LEU A 268 LYS A 280 -1 O LEU A 272 N ALA A 260 SHEET 15 A19 GLU A 289 TYR A 302 -1 O ILE A 291 N SER A 277 SHEET 16 A19 MET A 307 ASN A 316 -1 O THR A 309 N TYR A 301 SHEET 17 A19 ILE A 334 PHE A 343 -1 O ALA A 336 N ASP A 312 SHEET 18 A19 ASN A 9 SER A 24 -1 N GLY A 19 O LEU A 339 SHEET 19 A19 GLY A 31 ASP A 32 -1 O GLY A 31 N TYR A 22 SHEET 1 B 2 ARG A 243 VAL A 244 0 SHEET 2 B 2 GLY A 248 TRP A 249 -1 O GLY A 248 N VAL A 244 SHEET 1 C19 GLU B 2 LYS B 6 0 SHEET 2 C19 GLY B 31 ASP B 32 0 SHEET 3 C19 TYR B 35 GLN B 45 0 SHEET 4 C19 LEU B 50 GLN B 61 -1 O GLY B 52 N THR B 44 SHEET 5 C19 SER B 71 PHE B 82 -1 O TRP B 72 N GLN B 59 SHEET 6 C19 GLY B 86 TYR B 94 -1 O ARG B 92 N ALA B 76 SHEET 7 C19 ARG B 124 ASN B 133 -1 O THR B 130 N ASP B 89 SHEET 8 C19 LEU B 143 GLN B 150 -1 O TYR B 149 N ALA B 129 SHEET 9 C19 GLY B 176 TYR B 185 -1 O THR B 182 N ASP B 144 SHEET 10 C19 PHE B 188 LYS B 198 -1 O SER B 196 N VAL B 177 SHEET 11 C19 ARG B 214 ALA B 226 -1 O ALA B 215 N SER B 197 SHEET 12 C19 ILE B 229 TYR B 239 -1 O TYR B 235 N GLY B 220 SHEET 13 C19 LYS B 252 TYR B 262 -1 O ASN B 255 N THR B 236 SHEET 14 C19 LEU B 268 LYS B 280 -1 O LEU B 272 N ALA B 260 SHEET 15 C19 GLU B 289 TYR B 302 -1 O ILE B 291 N SER B 277 SHEET 16 C19 MET B 307 ASN B 316 -1 O THR B 309 N TYR B 301 SHEET 17 C19 ILE B 334 PHE B 343 -1 O ALA B 336 N ASP B 312 SHEET 18 C19 ASN B 9 SER B 24 -1 N GLY B 19 O LEU B 339 SHEET 19 C19 GLY B 31 ASP B 32 -1 O GLY B 31 N TYR B 22 SHEET 1 D 2 ARG B 243 VAL B 244 0 SHEET 2 D 2 GLY B 248 TRP B 249 -1 O GLY B 248 N VAL B 244 CRYST1 103.489 103.489 186.492 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009663 0.005579 0.000000 0.00000 SCALE2 0.000000 0.011158 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005362 0.00000