HEADER CELL ADHESION 06-JUL-10 2XJQ TITLE X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN TITLE 2 FLO5 FROM SACCHAROMYCES CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLOCCULATION PROTEIN FLO5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LECTIN-LIKE FLO5A-DOMAIN, RESIDUES 23-271; COMPND 5 SYNONYM: FLOCCULIN-5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: S288C; SOURCE 6 ATCC: 204508; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS CELL ADHESION, GREENBEARD, PA14-DOMAIN, CARBOHYDRATE BINDING, SOCIAL KEYWDS 2 INTERACTION EXPDTA X-RAY DIFFRACTION AUTHOR M.VEELDERS,S.BRUECKNER,D.OTT,C.UNVERZAGT,H.-U.MOESCH,L.-O.ESSEN REVDAT 2 13-APR-11 2XJQ 1 JRNL REMARK REVDAT 1 15-DEC-10 2XJQ 0 JRNL AUTH M.VEELDERS,S.BRUECKNER,D.OTT,C.UNVERZAGT,H.-U.MOESCH, JRNL AUTH 2 L.-O.ESSEN JRNL TITL STRUCTURAL BASIS OF FLOCCULIN-MEDIATED SOCIAL BEHAVIOR IN JRNL TITL 2 YEAST JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 22511 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 21149680 JRNL DOI 10.1073/PNAS.1013210108 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 96.20 REMARK 3 NUMBER OF REFLECTIONS : 63557 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.14309 REMARK 3 R VALUE (WORKING SET) : 0.14247 REMARK 3 FREE R VALUE : 0.17821 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.8 REMARK 3 FREE R VALUE TEST SET COUNT : 1178 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.350 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.385 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3929 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.212 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.259 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2058 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 317 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.646 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.93 REMARK 3 B22 (A**2) : 2.69 REMARK 3 B33 (A**2) : -0.76 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.047 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.048 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.034 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.901 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2163 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1401 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2990 ; 1.567 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3469 ; 0.962 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 306 ; 6.087 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;34.502 ;25.517 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 308 ;12.069 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ; 8.472 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 323 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2506 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 428 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1374 ; 1.525 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 556 ; 0.501 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2244 ; 2.306 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 789 ; 3.147 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 724 ; 4.380 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3564 ; 1.215 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 3 RESIDUES 197-199 ARE NOT WELL DEFINED. RESIDUES 200-204 HAVE REMARK 3 BEEN MODELLED IN TWO DISTINCT CONFORMATIONS. REMARK 4 REMARK 4 2XJQ COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUL-10. REMARK 100 THE PDBE ID CODE IS EBI-44256. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD (Q315R) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64748 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.35 REMARK 200 RESOLUTION RANGE LOW (A) : 40.16 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 4.7 REMARK 200 R MERGE (I) : 0.04 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.40 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.3 REMARK 200 R MERGE FOR SHELL (I) : 0.29 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC5 REMARK 200 STARTING MODEL: UNPUBLISHED STRUCTURAL DATA REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 M NACL, 0.1 M REMARK 280 BISTRIS-PROPANE PH7.5, 20% PEG4000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.13500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.00500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.79000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.00500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.13500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.79000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 18 CG CD NE CZ NH1 NH2 REMARK 470 MET A 22 CG SD CE REMARK 470 TRP A 196 CG CD1 CD2 NE1 CE2 CE3 CZ2 CZ3 REMARK 470 TRP A 196 CH2 REMARK 470 ASP A 197 CG OD1 OD2 REMARK 470 SER A 199 OG REMARK 470 LEU A 200 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 62 -29.07 -157.52 REMARK 500 ASP A 82 81.78 -150.16 REMARK 500 ILE A 171 -56.74 -124.90 REMARK 500 SER A 199 165.75 102.25 REMARK 500 SER A 199 167.73 102.25 REMARK 500 SER A 227 -127.76 44.37 REMARK 500 LEU A 231 85.54 -157.50 REMARK 500 ASP A 245 -61.04 71.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1272 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 82 OD1 REMARK 620 2 HOH A2019 O 97.0 REMARK 620 3 HOH A2123 O 118.1 67.2 REMARK 620 4 ASN A 84 OD1 107.0 87.0 129.7 REMARK 620 5 HOH A2261 O 126.6 135.0 81.1 89.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1274 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 161 OD1 REMARK 620 2 ASN A 224 OD1 81.8 REMARK 620 3 VAL A 226 O 140.8 87.4 REMARK 620 4 HOH A2051 O 104.1 165.3 79.6 REMARK 620 5 TRP A 228 O 121.1 91.2 96.6 97.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1272 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1273 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1274 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1275 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1276 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1277 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1278 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XJR RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE REMARK 900 FLOCCULIN FLO5 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX REMARK 900 WITH CALCIUM AND MAN5(D2-D3) REMARK 900 RELATED ID: 2XJU RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE REMARK 900 FLOCCULIN FLO5 FROM SACCHAROMYCES CEREVISIAE WITH MUTATION REMARK 900 S227A IN COMPLEX WITH CALCIUM AND A1,2-MANNOBIOSE REMARK 900 RELATED ID: 2XJV RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE REMARK 900 FLOCCULIN FLO5 FROM SACCHAROMYCES CEREVISIAE WITH MUTATION REMARK 900 D201T IN COMPLEX WITH CALCIUM AND GLUCOSE REMARK 900 RELATED ID: 2XJT RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE REMARK 900 FLOCCULIN FLO5 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX REMARK 900 WITH CALCIUM AND MAN5(D1) REMARK 900 RELATED ID: 2XJS RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE REMARK 900 FLOCCULIN FLO5 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX REMARK 900 WITH CALCIUM AND A1,2-MANNOBIOSE REMARK 900 RELATED ID: 2XJP RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE REMARK 900 FLOCCULIN FLO5 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX REMARK 900 WITH CALCIUM AND MANNOSE DBREF 2XJQ A 23 271 UNP P38894 FLO5_YEAST 23 271 SEQADV 2XJQ GLY A 14 UNP P38894 EXPRESSION TAG SEQADV 2XJQ LEU A 15 UNP P38894 EXPRESSION TAG SEQADV 2XJQ VAL A 16 UNP P38894 EXPRESSION TAG SEQADV 2XJQ PRO A 17 UNP P38894 EXPRESSION TAG SEQADV 2XJQ ARG A 18 UNP P38894 EXPRESSION TAG SEQADV 2XJQ GLY A 19 UNP P38894 EXPRESSION TAG SEQADV 2XJQ SER A 20 UNP P38894 EXPRESSION TAG SEQADV 2XJQ HIS A 21 UNP P38894 EXPRESSION TAG SEQADV 2XJQ MET A 22 UNP P38894 EXPRESSION TAG SEQRES 1 A 258 GLY LEU VAL PRO ARG GLY SER HIS MET SER GLY ALA THR SEQRES 2 A 258 GLU ALA CYS LEU PRO ALA GLY GLN ARG LYS SER GLY MET SEQRES 3 A 258 ASN ILE ASN PHE TYR GLN TYR SER LEU LYS ASP SER SER SEQRES 4 A 258 THR TYR SER ASN ALA ALA TYR MET ALA TYR GLY TYR ALA SEQRES 5 A 258 SER LYS THR LYS LEU GLY SER VAL GLY GLY GLN THR ASP SEQRES 6 A 258 ILE SER ILE ASP TYR ASN ILE PRO CYS VAL SER SER SER SEQRES 7 A 258 GLY THR PHE PRO CYS PRO GLN GLU ASP SER TYR GLY ASN SEQRES 8 A 258 TRP GLY CYS LYS GLY MET GLY ALA CYS SER ASN SER GLN SEQRES 9 A 258 GLY ILE ALA TYR TRP SER THR ASP LEU PHE GLY PHE TYR SEQRES 10 A 258 THR THR PRO THR ASN VAL THR LEU GLU MET THR GLY TYR SEQRES 11 A 258 PHE LEU PRO PRO GLN THR GLY SER TYR THR PHE SER PHE SEQRES 12 A 258 ALA THR VAL ASP ASP SER ALA ILE LEU SER VAL GLY GLY SEQRES 13 A 258 SER ILE ALA PHE GLU CYS CYS ALA GLN GLU GLN PRO PRO SEQRES 14 A 258 ILE THR SER THR ASN PHE THR ILE ASN GLY ILE LYS PRO SEQRES 15 A 258 TRP ASP GLY SER LEU PRO ASP ASN ILE THR GLY THR VAL SEQRES 16 A 258 TYR MET TYR ALA GLY TYR TYR TYR PRO LEU LYS VAL VAL SEQRES 17 A 258 TYR SER ASN ALA VAL SER TRP GLY THR LEU PRO ILE SER SEQRES 18 A 258 VAL GLU LEU PRO ASP GLY THR THR VAL SER ASP ASN PHE SEQRES 19 A 258 GLU GLY TYR VAL TYR SER PHE ASP ASP ASP LEU SER GLN SEQRES 20 A 258 SER ASN CYS THR ILE PRO ASP PRO SER ILE HIS HET NA A1272 1 HET CL A1273 1 HET NA A1274 1 HET GOL A1275 6 HET GOL A1276 6 HET GOL A1277 6 HET GOL A1278 6 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL FORMUL 2 NA 2(NA 1+) FORMUL 3 CL CL 1- FORMUL 4 GOL 4(C3 H8 O3) FORMUL 5 HOH *317(H2 O) HELIX 1 1 SER A 20 GLY A 24 5 5 HELIX 2 2 SER A 52 SER A 55 5 4 HELIX 3 3 ASN A 56 TYR A 62 1 7 HELIX 4 4 GLY A 63 LYS A 67 5 5 HELIX 5 5 PRO A 97 GLU A 99 5 3 SHEET 1 AA 2 ALA A 28 CYS A 29 0 SHEET 2 AA 2 THR A 264 ILE A 265 -1 O ILE A 265 N ALA A 28 SHEET 1 AB 6 LYS A 36 SER A 37 0 SHEET 2 AB 6 VAL A 251 SER A 253 -1 O SER A 253 N LYS A 36 SHEET 3 AB 6 VAL A 136 PHE A 144 1 O TYR A 143 N TYR A 252 SHEET 4 AB 6 TYR A 216 ASN A 224 -1 O TYR A 216 N PHE A 144 SHEET 5 AB 6 SER A 162 VAL A 167 -1 O SER A 162 N SER A 223 SHEET 6 AB 6 ILE A 190 GLY A 192 -1 O ILE A 190 N LEU A 165 SHEET 1 AC 5 LYS A 36 SER A 37 0 SHEET 2 AC 5 VAL A 251 SER A 253 -1 O SER A 253 N LYS A 36 SHEET 3 AC 5 VAL A 136 PHE A 144 1 O TYR A 143 N TYR A 252 SHEET 4 AC 5 MET A 39 TYR A 44 -1 O ASN A 40 N THR A 141 SHEET 5 AC 5 LYS A 69 GLN A 76 -1 N LEU A 70 O PHE A 43 SHEET 1 AD 2 ILE A 81 TYR A 83 0 SHEET 2 AD 2 GLY A 229 LEU A 231 -1 O GLY A 229 N TYR A 83 SHEET 1 AE 2 PRO A 86 SER A 89 0 SHEET 2 AE 2 GLY A 92 PRO A 95 -1 O GLY A 92 N SER A 89 SHEET 1 AF 3 SER A 101 TYR A 102 0 SHEET 2 AF 3 GLY A 106 CYS A 107 -1 O GLY A 106 N TYR A 102 SHEET 3 AF 3 GLY A 111 ALA A 112 -1 O GLY A 111 N CYS A 107 SHEET 1 AG 4 THR A 205 MET A 210 0 SHEET 2 AG 4 GLY A 150 PHE A 156 -1 O GLY A 150 N MET A 210 SHEET 3 AG 4 ILE A 233 GLU A 236 -1 O SER A 234 N SER A 155 SHEET 4 AG 4 THR A 242 SER A 244 -1 O VAL A 243 N VAL A 235 SSBOND 1 CYS A 29 CYS A 175 1555 1555 2.04 SSBOND 2 CYS A 87 CYS A 113 1555 1555 2.02 SSBOND 3 CYS A 96 CYS A 107 1555 1555 2.15 SSBOND 4 CYS A 176 CYS A 263 1555 1555 2.09 LINK NA NA A1272 OD1 ASP A 82 1555 1555 2.22 LINK NA NA A1272 O HOH A2019 1555 1555 2.24 LINK NA NA A1272 O HOH A2123 1555 1555 2.62 LINK NA NA A1272 OD1 ASN A 84 1555 1555 2.32 LINK NA NA A1272 O HOH A2261 1555 1555 2.01 LINK NA NA A1274 OD1 ASN A 224 1555 1555 2.31 LINK NA NA A1274 O VAL A 226 1555 1555 2.33 LINK NA NA A1274 O HOH A2051 1555 1555 2.37 LINK NA NA A1274 O TRP A 228 1555 1555 2.28 LINK NA NA A1274 OD1 ASP A 161 1555 1555 2.38 CISPEP 1 ASN A 104 TRP A 105 0 -2.05 CISPEP 2 ASP A 160 ASP A 161 0 10.61 SITE 1 AC1 5 ASP A 82 ASN A 84 HOH A2019 HOH A2123 SITE 2 AC1 5 HOH A2261 SITE 1 AC2 5 TYR A 102 CYS A 107 GLY A 109 GLY A 111 SITE 2 AC2 5 HOH A2289 SITE 1 AC3 5 ASP A 161 ASN A 224 VAL A 226 TRP A 228 SITE 2 AC3 5 HOH A2051 SITE 1 AC4 9 LYS A 36 ASN A 40 GLN A 178 SER A 253 SITE 2 AC4 9 PHE A 254 ASP A 255 HOH A2030 HOH A2106 SITE 3 AC4 9 HOH A2200 SITE 1 AC5 8 GLN A 45 VAL A 88 SER A 89 ALA A 112 SITE 2 AC5 8 SER A 114 HOH A2021 HOH A2059 HOH A2084 SITE 1 AC6 6 ASN A 104 TRP A 105 CYS A 113 HIS A 271 SITE 2 AC6 6 HOH A2060 HOH A2249 SITE 1 AC7 9 LEU A 70 ALA A 112 THR A 131 THR A 132 SITE 2 AC7 9 ASN A 135 HOH A2017 HOH A2055 HOH A2059 SITE 3 AC7 9 HOH A2060 CRYST1 46.270 61.580 106.010 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021612 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016239 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009433 0.00000