HEADER TRANSCRIPTION 19-JUL-10 2XL2 TITLE WDR5 IN COMPLEX WITH AN RBBP5 PEPTIDE RECRUITED TO NOVEL SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: WDR5, BMP2-INDUCED 3-KB GENE PROTEIN, WD REPEAT-CONTAINING COMPND 5 PROTEIN BIG-3; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RETINOBLASTOMA-BINDING PROTEIN 5; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: RESIDUES 369-381; COMPND 11 SYNONYM: RBBP5, RBBP-5; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: POPINJ; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090 KEYWDS TRANSCRIPTION, MLL COMPLEX, H3K4 METHYLATION, WD-40 BETA-PROPELLER EXPDTA X-RAY DIFFRACTION AUTHOR Z.ODHO,S.M.SOUTHALL,J.R.WILSON REVDAT 5 20-DEC-23 2XL2 1 REMARK REVDAT 4 29-JUN-11 2XL2 1 HETSYN REVDAT 3 27-OCT-10 2XL2 1 JRNL REMARK REVDAT 2 01-SEP-10 2XL2 1 JRNL REVDAT 1 04-AUG-10 2XL2 0 JRNL AUTH Z.ODHO,S.M.SOUTHALL,J.R.WILSON JRNL TITL CHARACTERISATION OF A NOVEL WDR5 BINDING SITE THAT RECRUITS JRNL TITL 2 RBBP5 THROUGH A CONSERVED MOTIF AND ENHANCES METHYLATION OF JRNL TITL 3 H3K4 BY MLL1. JRNL REF J.BIOL.CHEM. V. 285 32967 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20716525 JRNL DOI 10.1074/JBC.M110.159921 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 23706 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1206 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.7024 - 4.9901 0.97 2747 139 0.1725 0.2127 REMARK 3 2 4.9901 - 3.9616 0.98 2695 143 0.1306 0.1846 REMARK 3 3 3.9616 - 3.4611 0.97 2670 168 0.1587 0.2082 REMARK 3 4 3.4611 - 3.1447 0.97 2638 127 0.1749 0.2171 REMARK 3 5 3.1447 - 2.9194 0.93 2529 151 0.2001 0.2903 REMARK 3 6 2.9194 - 2.7473 0.90 2473 127 0.2073 0.2820 REMARK 3 7 2.7473 - 2.6097 0.86 2345 134 0.2150 0.2999 REMARK 3 8 2.6097 - 2.4961 0.81 2225 100 0.2312 0.3029 REMARK 3 9 2.4961 - 2.4000 0.79 2178 117 0.2536 0.3423 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 37.72 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 27.15140 REMARK 3 B22 (A**2) : -17.47120 REMARK 3 B33 (A**2) : -9.68020 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.12250 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5014 REMARK 3 ANGLE : 1.128 6801 REMARK 3 CHIRALITY : 0.086 770 REMARK 3 PLANARITY : 0.004 845 REMARK 3 DIHEDRAL : 15.411 1757 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 31:334 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 31:334 ) REMARK 3 ATOM PAIRS NUMBER : 2341 REMARK 3 RMSD : 0.030 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN C AND (RESSEQ 5:14 ) REMARK 3 SELECTION : CHAIN D AND (RESSEQ 5:14 ) REMARK 3 ATOM PAIRS NUMBER : 73 REMARK 3 RMSD : 0.118 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2XL2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1290044667. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23706 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 59.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2H13 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS HCL PH 8.0, 25% PEG 8000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.63000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 LYS A 6 REMARK 465 LYS A 7 REMARK 465 PRO A 8 REMARK 465 GLU A 9 REMARK 465 THR A 10 REMARK 465 GLU A 11 REMARK 465 ALA A 12 REMARK 465 ALA A 13 REMARK 465 ARG A 14 REMARK 465 ALA A 15 REMARK 465 GLN A 16 REMARK 465 PRO A 17 REMARK 465 THR A 18 REMARK 465 PRO A 19 REMARK 465 SER A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 ALA A 23 REMARK 465 THR A 24 REMARK 465 GLN A 25 REMARK 465 SER A 26 REMARK 465 LYS A 27 REMARK 465 PRO A 28 REMARK 465 THR A 29 REMARK 465 PRO A 30 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 GLU B 4 REMARK 465 GLU B 5 REMARK 465 LYS B 6 REMARK 465 LYS B 7 REMARK 465 PRO B 8 REMARK 465 GLU B 9 REMARK 465 THR B 10 REMARK 465 GLU B 11 REMARK 465 ALA B 12 REMARK 465 ALA B 13 REMARK 465 ARG B 14 REMARK 465 ALA B 15 REMARK 465 GLN B 16 REMARK 465 PRO B 17 REMARK 465 THR B 18 REMARK 465 PRO B 19 REMARK 465 SER B 20 REMARK 465 SER B 21 REMARK 465 SER B 22 REMARK 465 ALA B 23 REMARK 465 THR B 24 REMARK 465 GLN B 25 REMARK 465 SER B 26 REMARK 465 LYS B 27 REMARK 465 PRO B 28 REMARK 465 THR B 29 REMARK 465 PRO B 30 REMARK 465 TYR C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 465 GLU C 4 REMARK 465 TYR D 1 REMARK 465 ALA D 2 REMARK 465 ALA D 3 REMARK 465 GLU D 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU C 6 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2059 O HOH A 2076 2555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 67 -0.75 74.85 REMARK 500 GLU A 80 -70.03 -103.18 REMARK 500 SER A 99 5.78 59.49 REMARK 500 ASN A 136 145.30 -178.09 REMARK 500 ASP A 211 -154.27 -97.66 REMARK 500 ASN A 214 61.11 39.99 REMARK 500 LEU A 234 35.21 -71.80 REMARK 500 LEU A 249 -75.83 -130.51 REMARK 500 LYS A 259 -40.64 -143.67 REMARK 500 VAL A 268 17.49 -140.88 REMARK 500 GLU A 279 4.90 -68.16 REMARK 500 ASN A 281 -3.38 74.64 REMARK 500 ASP A 324 -58.01 -123.43 REMARK 500 ALA B 47 132.71 -36.73 REMARK 500 LYS B 67 -0.57 77.42 REMARK 500 GLU B 80 -68.49 -105.44 REMARK 500 ASN B 130 -174.11 -170.91 REMARK 500 ASN B 136 145.50 -176.93 REMARK 500 ARG B 181 -19.52 -49.45 REMARK 500 ASP B 211 -155.37 -96.59 REMARK 500 ASN B 214 60.19 39.65 REMARK 500 LEU B 234 34.27 -69.96 REMARK 500 LEU B 249 -75.57 -130.32 REMARK 500 LYS B 259 -41.66 -143.81 REMARK 500 VAL B 268 19.18 -141.51 REMARK 500 GLU B 279 6.17 -67.06 REMARK 500 ASN B 281 -1.98 73.11 REMARK 500 ASP B 324 -59.03 -123.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1336 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1336 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XL3 RELATED DB: PDB REMARK 900 WDR5 IN COMPLEX WITH RBBP5 PEPTIDE RECRUITED TO NOVEL SITE REMARK 999 REMARK 999 SEQUENCE REMARK 999 NON NATIVE TYROSINE AT AMINO TERMINUS DBREF 2XL2 A 1 334 UNP P61965 WDR5_MOUSE 1 334 DBREF 2XL2 B 1 334 UNP P61965 WDR5_MOUSE 1 334 DBREF 2XL2 C 2 14 UNP Q8BX09 RBBP5_MOUSE 369 381 DBREF 2XL2 D 2 14 UNP Q8BX09 RBBP5_MOUSE 369 381 SEQADV 2XL2 TYR C 1 UNP Q8BX09 EXPRESSION TAG SEQADV 2XL2 TYR D 1 UNP Q8BX09 EXPRESSION TAG SEQRES 1 A 334 MET ALA THR GLU GLU LYS LYS PRO GLU THR GLU ALA ALA SEQRES 2 A 334 ARG ALA GLN PRO THR PRO SER SER SER ALA THR GLN SER SEQRES 3 A 334 LYS PRO THR PRO VAL LYS PRO ASN TYR ALA LEU LYS PHE SEQRES 4 A 334 THR LEU ALA GLY HIS THR LYS ALA VAL SER SER VAL LYS SEQRES 5 A 334 PHE SER PRO ASN GLY GLU TRP LEU ALA SER SER SER ALA SEQRES 6 A 334 ASP LYS LEU ILE LYS ILE TRP GLY ALA TYR ASP GLY LYS SEQRES 7 A 334 PHE GLU LYS THR ILE SER GLY HIS LYS LEU GLY ILE SER SEQRES 8 A 334 ASP VAL ALA TRP SER SER ASP SER ASN LEU LEU VAL SER SEQRES 9 A 334 ALA SER ASP ASP LYS THR LEU LYS ILE TRP ASP VAL SER SEQRES 10 A 334 SER GLY LYS CYS LEU LYS THR LEU LYS GLY HIS SER ASN SEQRES 11 A 334 TYR VAL PHE CYS CYS ASN PHE ASN PRO GLN SER ASN LEU SEQRES 12 A 334 ILE VAL SER GLY SER PHE ASP GLU SER VAL ARG ILE TRP SEQRES 13 A 334 ASP VAL LYS THR GLY LYS CYS LEU LYS THR LEU PRO ALA SEQRES 14 A 334 HIS SER ASP PRO VAL SER ALA VAL HIS PHE ASN ARG ASP SEQRES 15 A 334 GLY SER LEU ILE VAL SER SER SER TYR ASP GLY LEU CYS SEQRES 16 A 334 ARG ILE TRP ASP THR ALA SER GLY GLN CYS LEU LYS THR SEQRES 17 A 334 LEU ILE ASP ASP ASP ASN PRO PRO VAL SER PHE VAL LYS SEQRES 18 A 334 PHE SER PRO ASN GLY LYS TYR ILE LEU ALA ALA THR LEU SEQRES 19 A 334 ASP ASN THR LEU LYS LEU TRP ASP TYR SER LYS GLY LYS SEQRES 20 A 334 CYS LEU LYS THR TYR THR GLY HIS LYS ASN GLU LYS TYR SEQRES 21 A 334 CYS ILE PHE ALA ASN PHE SER VAL THR GLY GLY LYS TRP SEQRES 22 A 334 ILE VAL SER GLY SER GLU ASP ASN LEU VAL TYR ILE TRP SEQRES 23 A 334 ASN LEU GLN THR LYS GLU ILE VAL GLN LYS LEU GLN GLY SEQRES 24 A 334 HIS THR ASP VAL VAL ILE SER THR ALA CYS HIS PRO THR SEQRES 25 A 334 GLU ASN ILE ILE ALA SER ALA ALA LEU GLU ASN ASP LYS SEQRES 26 A 334 THR ILE LYS LEU TRP LYS SER ASP CYS SEQRES 1 B 334 MET ALA THR GLU GLU LYS LYS PRO GLU THR GLU ALA ALA SEQRES 2 B 334 ARG ALA GLN PRO THR PRO SER SER SER ALA THR GLN SER SEQRES 3 B 334 LYS PRO THR PRO VAL LYS PRO ASN TYR ALA LEU LYS PHE SEQRES 4 B 334 THR LEU ALA GLY HIS THR LYS ALA VAL SER SER VAL LYS SEQRES 5 B 334 PHE SER PRO ASN GLY GLU TRP LEU ALA SER SER SER ALA SEQRES 6 B 334 ASP LYS LEU ILE LYS ILE TRP GLY ALA TYR ASP GLY LYS SEQRES 7 B 334 PHE GLU LYS THR ILE SER GLY HIS LYS LEU GLY ILE SER SEQRES 8 B 334 ASP VAL ALA TRP SER SER ASP SER ASN LEU LEU VAL SER SEQRES 9 B 334 ALA SER ASP ASP LYS THR LEU LYS ILE TRP ASP VAL SER SEQRES 10 B 334 SER GLY LYS CYS LEU LYS THR LEU LYS GLY HIS SER ASN SEQRES 11 B 334 TYR VAL PHE CYS CYS ASN PHE ASN PRO GLN SER ASN LEU SEQRES 12 B 334 ILE VAL SER GLY SER PHE ASP GLU SER VAL ARG ILE TRP SEQRES 13 B 334 ASP VAL LYS THR GLY LYS CYS LEU LYS THR LEU PRO ALA SEQRES 14 B 334 HIS SER ASP PRO VAL SER ALA VAL HIS PHE ASN ARG ASP SEQRES 15 B 334 GLY SER LEU ILE VAL SER SER SER TYR ASP GLY LEU CYS SEQRES 16 B 334 ARG ILE TRP ASP THR ALA SER GLY GLN CYS LEU LYS THR SEQRES 17 B 334 LEU ILE ASP ASP ASP ASN PRO PRO VAL SER PHE VAL LYS SEQRES 18 B 334 PHE SER PRO ASN GLY LYS TYR ILE LEU ALA ALA THR LEU SEQRES 19 B 334 ASP ASN THR LEU LYS LEU TRP ASP TYR SER LYS GLY LYS SEQRES 20 B 334 CYS LEU LYS THR TYR THR GLY HIS LYS ASN GLU LYS TYR SEQRES 21 B 334 CYS ILE PHE ALA ASN PHE SER VAL THR GLY GLY LYS TRP SEQRES 22 B 334 ILE VAL SER GLY SER GLU ASP ASN LEU VAL TYR ILE TRP SEQRES 23 B 334 ASN LEU GLN THR LYS GLU ILE VAL GLN LYS LEU GLN GLY SEQRES 24 B 334 HIS THR ASP VAL VAL ILE SER THR ALA CYS HIS PRO THR SEQRES 25 B 334 GLU ASN ILE ILE ALA SER ALA ALA LEU GLU ASN ASP LYS SEQRES 26 B 334 THR ILE LYS LEU TRP LYS SER ASP CYS SEQRES 1 C 14 TYR ALA ALA GLU ASP GLU GLU VAL ASP VAL THR SER VAL SEQRES 2 C 14 ASP SEQRES 1 D 14 TYR ALA ALA GLU ASP GLU GLU VAL ASP VAL THR SER VAL SEQRES 2 D 14 ASP HET GOL A1335 6 HET GOL A1336 6 HET GOL B1335 6 HET GOL B1336 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 4(C3 H8 O3) FORMUL 9 HOH *188(H2 O) SHEET 1 AA 4 ALA A 36 LEU A 41 0 SHEET 2 AA 4 ILE A 327 LYS A 331 -1 O ILE A 327 N LEU A 41 SHEET 3 AA 4 ILE A 315 ALA A 320 -1 O ILE A 316 N TRP A 330 SHEET 4 AA 4 VAL A 304 CYS A 309 -1 N ILE A 305 O ALA A 319 SHEET 1 AB 4 VAL A 48 PHE A 53 0 SHEET 2 AB 4 TRP A 59 SER A 64 -1 O ALA A 61 N LYS A 52 SHEET 3 AB 4 ILE A 69 GLY A 73 -1 O LYS A 70 N SER A 62 SHEET 4 AB 4 PHE A 79 ILE A 83 -1 N GLU A 80 O ILE A 71 SHEET 1 AC 4 ILE A 90 TRP A 95 0 SHEET 2 AC 4 LEU A 101 SER A 106 -1 O VAL A 103 N ALA A 94 SHEET 3 AC 4 THR A 110 ASP A 115 -1 O THR A 110 N SER A 106 SHEET 4 AC 4 LYS A 120 LYS A 126 -1 O LYS A 120 N ASP A 115 SHEET 1 AD 4 VAL A 132 PHE A 137 0 SHEET 2 AD 4 LEU A 143 SER A 148 -1 O VAL A 145 N ASN A 136 SHEET 3 AD 4 VAL A 153 ASP A 157 -1 O ARG A 154 N SER A 146 SHEET 4 AD 4 CYS A 163 LEU A 167 -1 N LEU A 164 O ILE A 155 SHEET 1 AE 4 VAL A 174 PHE A 179 0 SHEET 2 AE 4 LEU A 185 SER A 190 -1 O VAL A 187 N HIS A 178 SHEET 3 AE 4 CYS A 195 ASP A 199 -1 O ARG A 196 N SER A 188 SHEET 4 AE 4 GLN A 204 LEU A 209 -1 O GLN A 204 N ASP A 199 SHEET 1 AF 4 VAL A 217 PHE A 222 0 SHEET 2 AF 4 TYR A 228 THR A 233 -1 O LEU A 230 N LYS A 221 SHEET 3 AF 4 THR A 237 ASP A 242 -1 O THR A 237 N THR A 233 SHEET 4 AF 4 LYS A 247 TYR A 252 -1 O LYS A 247 N ASP A 242 SHEET 1 AG 4 ALA A 264 SER A 267 0 SHEET 2 AG 4 TRP A 273 SER A 276 -1 O TRP A 273 N SER A 267 SHEET 3 AG 4 VAL A 283 ASN A 287 -1 O TYR A 284 N SER A 276 SHEET 4 AG 4 ILE A 293 LEU A 297 -1 N VAL A 294 O ILE A 285 SHEET 1 BA 4 ALA B 36 LEU B 41 0 SHEET 2 BA 4 ILE B 327 LYS B 331 -1 O ILE B 327 N LEU B 41 SHEET 3 BA 4 ILE B 315 ALA B 320 -1 O ILE B 316 N TRP B 330 SHEET 4 BA 4 VAL B 304 CYS B 309 -1 N ILE B 305 O ALA B 319 SHEET 1 BB 4 VAL B 48 PHE B 53 0 SHEET 2 BB 4 TRP B 59 SER B 64 -1 O ALA B 61 N LYS B 52 SHEET 3 BB 4 ILE B 69 GLY B 73 -1 O LYS B 70 N SER B 62 SHEET 4 BB 4 PHE B 79 ILE B 83 -1 N GLU B 80 O ILE B 71 SHEET 1 BC 4 ILE B 90 TRP B 95 0 SHEET 2 BC 4 LEU B 101 SER B 106 -1 O VAL B 103 N ALA B 94 SHEET 3 BC 4 THR B 110 ASP B 115 -1 O THR B 110 N SER B 106 SHEET 4 BC 4 LYS B 120 LYS B 126 -1 O LYS B 120 N ASP B 115 SHEET 1 BD 4 VAL B 132 PHE B 137 0 SHEET 2 BD 4 LEU B 143 SER B 148 -1 O VAL B 145 N ASN B 136 SHEET 3 BD 4 VAL B 153 ASP B 157 -1 O ARG B 154 N SER B 146 SHEET 4 BD 4 CYS B 163 LEU B 167 -1 N LEU B 164 O ILE B 155 SHEET 1 BE 4 VAL B 174 PHE B 179 0 SHEET 2 BE 4 LEU B 185 SER B 190 -1 O VAL B 187 N HIS B 178 SHEET 3 BE 4 CYS B 195 ASP B 199 -1 O ARG B 196 N SER B 188 SHEET 4 BE 4 GLN B 204 LEU B 209 -1 O GLN B 204 N ASP B 199 SHEET 1 BF 4 VAL B 217 PHE B 222 0 SHEET 2 BF 4 TYR B 228 THR B 233 -1 O LEU B 230 N LYS B 221 SHEET 3 BF 4 THR B 237 ASP B 242 -1 O THR B 237 N THR B 233 SHEET 4 BF 4 LYS B 247 TYR B 252 -1 O LYS B 247 N ASP B 242 SHEET 1 BG 4 ALA B 264 SER B 267 0 SHEET 2 BG 4 TRP B 273 SER B 276 -1 O TRP B 273 N SER B 267 SHEET 3 BG 4 VAL B 283 ASN B 287 -1 O TYR B 284 N SER B 276 SHEET 4 BG 4 ILE B 293 LEU B 297 -1 N VAL B 294 O ILE B 285 SITE 1 AC1 2 GLU A 151 SER A 171 SITE 1 AC2 5 TRP A 59 GLU A 80 VAL A 116 HOH A2080 SITE 2 AC2 5 HOH A2081 SITE 1 AC3 2 GLU B 151 SER B 171 SITE 1 AC4 2 TRP B 59 GLU B 80 CRYST1 47.440 81.260 87.520 90.00 93.12 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021079 0.000000 0.001149 0.00000 SCALE2 0.000000 0.012306 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011443 0.00000 MTRIX1 1 0.993557 0.002602 0.113304 -2.50470 1 MTRIX2 1 0.002411 -0.999995 0.001820 -14.36000 1 MTRIX3 1 0.113308 -0.001535 -0.993559 43.60110 1