data_2XLO # _entry.id 2XLO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.322 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2XLO PDBE EBI-44707 WWPDB D_1290044707 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1CGN unspecified ;CYTOCHROME C' ; PDB 1E85 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE WITH NO BOUND TO PROXIMAL SIDE OF HEME ; PDB 2XLH unspecified ;REDUCED STRUCTURE OF R124A MUTANT OF CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS ; PDB 2XLM unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS RECOMBINANT NATIVE WITH BOUND NO' PDB 2XL5 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124K VARIANT' PDB 1CGO unspecified ;CYTOCHROME C' ; PDB 1E83 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - OXIDIZED STRUCTURE ; PDB 1E86 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE WITH CO BOUND TO DISTAL SIDE OF HEME ; PDB 2XL8 unspecified ;REDUCED STRUCTURE OF R124F MUTANT OF CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS ; PDB 2XL6 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124A VARIANT WITH BOUND NO' PDB 1E84 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE ; PDB 2XLD unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124Q VARIANT' PDB 2XLE unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124K VARIANT WITH BOUND NO' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2XLO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-07-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hough, M.A.' 1 'Antonyuk, S.V.' 2 'Hasnain, S.S.' 3 # _citation.id primary _citation.title 'Distal-to-Proximal No Conversion in Hemoproteins: The Role of the Proximal Pocket.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 405 _citation.page_first 395 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21073879 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2010.10.035 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hough, M.A.' 1 ? primary 'Antonyuk, S.V.' 2 ? primary 'Barbieri, S.' 3 ? primary 'Rustage, N.' 4 ? primary 'Mckay, A.L.' 5 ? primary 'Servid, A.E.' 6 ? primary 'Eady, R.R.' 7 ? primary 'Andrew, C.R.' 8 ? primary 'Hasnain, S.S.' 9 ? # _cell.entry_id 2XLO _cell.length_a 54.110 _cell.length_b 54.110 _cell.length_c 181.336 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XLO _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;CYTOCHROME C' ; 13603.362 1 ? YES ? ? 2 non-polymer syn 'HEME C' 618.503 1 ? ? ? ? 3 non-polymer syn 'NITRIC OXIDE' 30.006 1 ? ? ? ? 4 water nat water 18.015 188 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(PCA)FAKPEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALPWAAFGPGTEGGDARPEIWSDA ASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASCKACHDAYEKKK ; _entity_poly.pdbx_seq_one_letter_code_can ;QFAKPEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALPWAAFGPGTEGGDARPEIWSDAASFK QKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASCKACHDAYEKKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PCA n 1 2 PHE n 1 3 ALA n 1 4 LYS n 1 5 PRO n 1 6 GLU n 1 7 ASP n 1 8 ALA n 1 9 VAL n 1 10 LYS n 1 11 TYR n 1 12 ARG n 1 13 GLN n 1 14 SER n 1 15 ALA n 1 16 LEU n 1 17 THR n 1 18 LEU n 1 19 MET n 1 20 ALA n 1 21 SER n 1 22 HIS n 1 23 PHE n 1 24 GLY n 1 25 ARG n 1 26 MET n 1 27 THR n 1 28 PRO n 1 29 VAL n 1 30 VAL n 1 31 LYS n 1 32 GLY n 1 33 GLN n 1 34 ALA n 1 35 PRO n 1 36 TYR n 1 37 ASP n 1 38 ALA n 1 39 ALA n 1 40 GLN n 1 41 ILE n 1 42 LYS n 1 43 ALA n 1 44 ASN n 1 45 VAL n 1 46 GLU n 1 47 VAL n 1 48 LEU n 1 49 LYS n 1 50 THR n 1 51 LEU n 1 52 SER n 1 53 ALA n 1 54 LEU n 1 55 PRO n 1 56 TRP n 1 57 ALA n 1 58 ALA n 1 59 PHE n 1 60 GLY n 1 61 PRO n 1 62 GLY n 1 63 THR n 1 64 GLU n 1 65 GLY n 1 66 GLY n 1 67 ASP n 1 68 ALA n 1 69 ARG n 1 70 PRO n 1 71 GLU n 1 72 ILE n 1 73 TRP n 1 74 SER n 1 75 ASP n 1 76 ALA n 1 77 ALA n 1 78 SER n 1 79 PHE n 1 80 LYS n 1 81 GLN n 1 82 LYS n 1 83 GLN n 1 84 GLN n 1 85 ALA n 1 86 PHE n 1 87 GLN n 1 88 ASP n 1 89 ASN n 1 90 ILE n 1 91 VAL n 1 92 LYS n 1 93 LEU n 1 94 SER n 1 95 ALA n 1 96 ALA n 1 97 ALA n 1 98 ASP n 1 99 ALA n 1 100 GLY n 1 101 ASP n 1 102 LEU n 1 103 ASP n 1 104 LYS n 1 105 LEU n 1 106 ARG n 1 107 ALA n 1 108 ALA n 1 109 PHE n 1 110 GLY n 1 111 ASP n 1 112 VAL n 1 113 GLY n 1 114 ALA n 1 115 SER n 1 116 CYS n 1 117 LYS n 1 118 ALA n 1 119 CYS n 1 120 HIS n 1 121 ASP n 1 122 ALA n 1 123 TYR n 1 124 GLU n 1 125 LYS n 1 126 LYS n 1 127 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ACHROMOBACTER XYLOSOXIDANS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 85698 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CYCP_ALCXX _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P00138 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2XLO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00138 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 127 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 127 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2XLO _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 124 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00138 _struct_ref_seq_dif.db_mon_id ARG _struct_ref_seq_dif.pdbx_seq_db_seq_num 124 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 124 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEC non-polymer . 'HEME C' ? 'C34 H34 Fe N4 O4' 618.503 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO non-polymer . 'NITRIC OXIDE' 'Nitrogen monoxide' 'N O' 30.006 PCA 'L-peptide linking' n 'PYROGLUTAMIC ACID' ? 'C5 H7 N O3' 129.114 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2XLO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.82 _exptl_crystal.density_percent_sol 56.33 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'AMMONIUM SULPHATE, HEPES PH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111) DCM' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_wavelength 0.98 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2XLO _reflns.observed_criterion_sigma_I . _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.70 _reflns.d_resolution_high 1.14 _reflns.number_obs 58038 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 35 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.14 _reflns_shell.d_res_low 1.18 _reflns_shell.percent_possible_all 88.6 _reflns_shell.Rmerge_I_obs 0.33 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 4.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2XLO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 42727 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.88 _refine.ls_d_res_high 1.24 _refine.ls_percent_reflns_obs 98.57 _refine.ls_R_factor_obs 0.17558 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17428 _refine.ls_R_factor_R_free 0.19960 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2303 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.959 _refine.B_iso_mean 14.369 _refine.aniso_B[1][1] 1.13 _refine.aniso_B[2][2] 1.13 _refine.aniso_B[3][3] -1.70 _refine.aniso_B[1][2] 0.57 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.U VALUES REFINED INDIVIDUALLY.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.048 _refine.pdbx_overall_ESU_R_Free 0.046 _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 938 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 188 _refine_hist.number_atoms_total 1171 _refine_hist.d_res_high 1.24 _refine_hist.d_res_low 46.88 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 1274 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1086 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.985 2.047 ? 1763 'X-RAY DIFFRACTION' ? r_angle_other_deg 8.990 3.000 ? 2543 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.375 5.000 ? 175 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.272 25.556 ? 54 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.992 15.000 ? 189 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.222 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.103 0.200 ? 173 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.013 0.021 ? 1542 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.014 0.020 ? 254 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.825 1.500 ? 798 'X-RAY DIFFRACTION' ? r_mcbond_other 4.276 1.500 ? 321 'X-RAY DIFFRACTION' ? r_mcangle_it 2.656 2.000 ? 1276 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.243 3.000 ? 476 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.250 4.500 ? 482 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.987 3.000 ? 2360 'X-RAY DIFFRACTION' ? r_sphericity_free 10.493 3.000 ? 199 'X-RAY DIFFRACTION' ? r_sphericity_bonded 5.506 3.000 ? 2309 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.240 _refine_ls_shell.d_res_low 1.272 _refine_ls_shell.number_reflns_R_work 3120 _refine_ls_shell.R_factor_R_work 0.316 _refine_ls_shell.percent_reflns_obs 99.57 _refine_ls_shell.R_factor_R_free 0.335 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 145 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2XLO _struct.title 'Cytochrome c prime from Alcaligenes xylosoxidans: Ferrous R124E variant with bound NO' _struct.pdbx_descriptor ;CYTOCHROME C' ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2XLO _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT, HAEMOPROTEIN, 4-HELIX BUNDLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 4 ? ARG A 25 ? LYS A 4 ARG A 25 1 ? 22 HELX_P HELX_P2 2 MET A 26 ? LYS A 31 ? MET A 26 LYS A 31 1 ? 6 HELX_P HELX_P3 3 ASP A 37 ? ALA A 53 ? ASP A 37 ALA A 53 1 ? 17 HELX_P HELX_P4 4 PRO A 55 ? PHE A 59 ? PRO A 55 PHE A 59 5 ? 5 HELX_P HELX_P5 5 PRO A 70 ? ASP A 75 ? PRO A 70 ASP A 75 1 ? 6 HELX_P HELX_P6 6 ASP A 75 ? GLY A 100 ? ASP A 75 GLY A 100 1 ? 26 HELX_P HELX_P7 7 ASP A 101 ? GLU A 124 ? ASP A 101 GLU A 124 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A PCA 1 C ? ? ? 1_555 A PHE 2 N ? ? A PCA 1 A PHE 2 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale none ? A CYS 116 SG ? ? ? 1_555 B HEC . CAB ? ? A CYS 116 A HEC 1127 1_555 ? ? ? ? ? ? ? 1.798 ? covale3 covale none ? A CYS 119 SG ? ? ? 1_555 B HEC . CAC ? ? A CYS 119 A HEC 1127 1_555 ? ? ? ? ? ? ? 1.809 ? metalc1 metalc ? ? B HEC . FE ? ? ? 1_555 C NO . O B ? A HEC 1127 A NO 1128 1_555 ? ? ? ? ? ? ? 2.731 ? metalc2 metalc ? ? B HEC . FE ? ? ? 1_555 C NO . N B ? A HEC 1127 A NO 1128 1_555 ? ? ? ? ? ? ? 2.062 ? metalc3 metalc ? ? B HEC . FE ? ? ? 1_555 C NO . N A ? A HEC 1127 A NO 1128 1_555 ? ? ? ? ? ? ? 1.880 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 22 'BINDING SITE FOR RESIDUE HEC A 1127' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NO A 1128' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 ARG A 12 ? ARG A 12 . ? 1_555 ? 2 AC1 22 GLN A 13 ? GLN A 13 . ? 1_555 ? 3 AC1 22 LEU A 16 ? LEU A 16 . ? 1_555 ? 4 AC1 22 THR A 17 ? THR A 17 . ? 1_555 ? 5 AC1 22 MET A 19 ? MET A 19 . ? 1_555 ? 6 AC1 22 ALA A 20 ? ALA A 20 . ? 1_555 ? 7 AC1 22 TRP A 56 ? TRP A 56 . ? 1_555 ? 8 AC1 22 GLY A 65 ? GLY A 65 . ? 1_555 ? 9 AC1 22 ASP A 67 ? ASP A 67 . ? 1_555 ? 10 AC1 22 ILE A 72 ? ILE A 72 . ? 1_555 ? 11 AC1 22 PHE A 79 ? PHE A 79 . ? 1_555 ? 12 AC1 22 GLN A 83 ? GLN A 83 . ? 1_555 ? 13 AC1 22 PHE A 86 ? PHE A 86 . ? 1_555 ? 14 AC1 22 CYS A 116 ? CYS A 116 . ? 1_555 ? 15 AC1 22 CYS A 119 ? CYS A 119 . ? 1_555 ? 16 AC1 22 TYR A 123 ? TYR A 123 . ? 1_555 ? 17 AC1 22 GLU A 124 ? GLU A 124 . ? 1_555 ? 18 AC1 22 NO C . ? NO A 1128 . ? 1_555 ? 19 AC1 22 HOH D . ? HOH A 2021 . ? 10_665 ? 20 AC1 22 HOH D . ? HOH A 2192 . ? 1_555 ? 21 AC1 22 HOH D . ? HOH A 2193 . ? 1_555 ? 22 AC1 22 HOH D . ? HOH A 2194 . ? 1_555 ? 23 AC2 4 CYS A 116 ? CYS A 116 . ? 1_555 ? 24 AC2 4 HIS A 120 ? HIS A 120 . ? 1_555 ? 25 AC2 4 GLU A 124 ? GLU A 124 . ? 1_555 ? 26 AC2 4 HEC B . ? HEC A 1127 . ? 1_555 ? # _database_PDB_matrix.entry_id 2XLO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2XLO _atom_sites.fract_transf_matrix[1][1] 0.018481 _atom_sites.fract_transf_matrix[1][2] 0.010670 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021340 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005515 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PCA 1 1 1 PCA PCA A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 MET 19 19 19 MET MET A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TRP 56 56 56 TRP TRP A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 TRP 73 73 73 TRP TRP A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 CYS 116 116 116 CYS CYS A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 CYS 119 119 119 CYS CYS A . n A 1 120 HIS 120 120 120 HIS HIS A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 LYS 127 127 127 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC 1 1127 1127 HEC HEC A . C 3 NO 1 1128 1128 NO NO A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2037 2037 HOH HOH A . D 4 HOH 37 2038 2038 HOH HOH A . D 4 HOH 38 2039 2039 HOH HOH A . D 4 HOH 39 2040 2040 HOH HOH A . D 4 HOH 40 2041 2041 HOH HOH A . D 4 HOH 41 2042 2042 HOH HOH A . D 4 HOH 42 2043 2043 HOH HOH A . D 4 HOH 43 2044 2044 HOH HOH A . D 4 HOH 44 2045 2045 HOH HOH A . D 4 HOH 45 2046 2046 HOH HOH A . D 4 HOH 46 2047 2047 HOH HOH A . D 4 HOH 47 2048 2048 HOH HOH A . D 4 HOH 48 2049 2049 HOH HOH A . D 4 HOH 49 2050 2050 HOH HOH A . D 4 HOH 50 2051 2051 HOH HOH A . D 4 HOH 51 2052 2052 HOH HOH A . D 4 HOH 52 2053 2053 HOH HOH A . D 4 HOH 53 2054 2054 HOH HOH A . D 4 HOH 54 2055 2055 HOH HOH A . D 4 HOH 55 2056 2056 HOH HOH A . D 4 HOH 56 2057 2057 HOH HOH A . D 4 HOH 57 2058 2058 HOH HOH A . D 4 HOH 58 2059 2059 HOH HOH A . D 4 HOH 59 2060 2060 HOH HOH A . D 4 HOH 60 2061 2061 HOH HOH A . D 4 HOH 61 2062 2062 HOH HOH A . D 4 HOH 62 2063 2063 HOH HOH A . D 4 HOH 63 2064 2064 HOH HOH A . D 4 HOH 64 2065 2065 HOH HOH A . D 4 HOH 65 2066 2066 HOH HOH A . D 4 HOH 66 2067 2067 HOH HOH A . D 4 HOH 67 2068 2068 HOH HOH A . D 4 HOH 68 2069 2069 HOH HOH A . D 4 HOH 69 2070 2070 HOH HOH A . D 4 HOH 70 2071 2071 HOH HOH A . D 4 HOH 71 2073 2073 HOH HOH A . D 4 HOH 72 2074 2074 HOH HOH A . D 4 HOH 73 2075 2075 HOH HOH A . D 4 HOH 74 2076 2076 HOH HOH A . D 4 HOH 75 2077 2077 HOH HOH A . D 4 HOH 76 2078 2078 HOH HOH A . D 4 HOH 77 2079 2079 HOH HOH A . D 4 HOH 78 2080 2080 HOH HOH A . D 4 HOH 79 2081 2081 HOH HOH A . D 4 HOH 80 2082 2082 HOH HOH A . D 4 HOH 81 2083 2083 HOH HOH A . D 4 HOH 82 2084 2084 HOH HOH A . D 4 HOH 83 2085 2085 HOH HOH A . D 4 HOH 84 2086 2086 HOH HOH A . D 4 HOH 85 2088 2088 HOH HOH A . D 4 HOH 86 2089 2089 HOH HOH A . D 4 HOH 87 2090 2090 HOH HOH A . D 4 HOH 88 2091 2091 HOH HOH A . D 4 HOH 89 2092 2092 HOH HOH A . D 4 HOH 90 2093 2093 HOH HOH A . D 4 HOH 91 2094 2094 HOH HOH A . D 4 HOH 92 2095 2095 HOH HOH A . D 4 HOH 93 2096 2096 HOH HOH A . D 4 HOH 94 2097 2097 HOH HOH A . D 4 HOH 95 2098 2098 HOH HOH A . D 4 HOH 96 2099 2099 HOH HOH A . D 4 HOH 97 2100 2100 HOH HOH A . D 4 HOH 98 2101 2101 HOH HOH A . D 4 HOH 99 2103 2103 HOH HOH A . D 4 HOH 100 2104 2104 HOH HOH A . D 4 HOH 101 2105 2105 HOH HOH A . D 4 HOH 102 2106 2106 HOH HOH A . D 4 HOH 103 2107 2107 HOH HOH A . D 4 HOH 104 2108 2108 HOH HOH A . D 4 HOH 105 2109 2109 HOH HOH A . D 4 HOH 106 2110 2110 HOH HOH A . D 4 HOH 107 2111 2111 HOH HOH A . D 4 HOH 108 2112 2112 HOH HOH A . D 4 HOH 109 2113 2113 HOH HOH A . D 4 HOH 110 2114 2114 HOH HOH A . D 4 HOH 111 2115 2115 HOH HOH A . D 4 HOH 112 2116 2116 HOH HOH A . D 4 HOH 113 2117 2117 HOH HOH A . D 4 HOH 114 2118 2118 HOH HOH A . D 4 HOH 115 2119 2119 HOH HOH A . D 4 HOH 116 2120 2120 HOH HOH A . D 4 HOH 117 2121 2121 HOH HOH A . D 4 HOH 118 2122 2122 HOH HOH A . D 4 HOH 119 2123 2123 HOH HOH A . D 4 HOH 120 2124 2124 HOH HOH A . D 4 HOH 121 2125 2125 HOH HOH A . D 4 HOH 122 2127 2127 HOH HOH A . D 4 HOH 123 2128 2128 HOH HOH A . D 4 HOH 124 2129 2129 HOH HOH A . D 4 HOH 125 2130 2130 HOH HOH A . D 4 HOH 126 2131 2131 HOH HOH A . D 4 HOH 127 2132 2132 HOH HOH A . D 4 HOH 128 2133 2133 HOH HOH A . D 4 HOH 129 2134 2134 HOH HOH A . D 4 HOH 130 2135 2135 HOH HOH A . D 4 HOH 131 2136 2136 HOH HOH A . D 4 HOH 132 2137 2137 HOH HOH A . D 4 HOH 133 2138 2138 HOH HOH A . D 4 HOH 134 2139 2139 HOH HOH A . D 4 HOH 135 2140 2140 HOH HOH A . D 4 HOH 136 2141 2141 HOH HOH A . D 4 HOH 137 2142 2142 HOH HOH A . D 4 HOH 138 2144 2144 HOH HOH A . D 4 HOH 139 2145 2145 HOH HOH A . D 4 HOH 140 2146 2146 HOH HOH A . D 4 HOH 141 2147 2147 HOH HOH A . D 4 HOH 142 2148 2148 HOH HOH A . D 4 HOH 143 2149 2149 HOH HOH A . D 4 HOH 144 2150 2150 HOH HOH A . D 4 HOH 145 2151 2151 HOH HOH A . D 4 HOH 146 2152 2152 HOH HOH A . D 4 HOH 147 2153 2153 HOH HOH A . D 4 HOH 148 2154 2154 HOH HOH A . D 4 HOH 149 2155 2155 HOH HOH A . D 4 HOH 150 2156 2156 HOH HOH A . D 4 HOH 151 2157 2157 HOH HOH A . D 4 HOH 152 2158 2158 HOH HOH A . D 4 HOH 153 2159 2159 HOH HOH A . D 4 HOH 154 2160 2160 HOH HOH A . D 4 HOH 155 2161 2161 HOH HOH A . D 4 HOH 156 2162 2162 HOH HOH A . D 4 HOH 157 2163 2163 HOH HOH A . D 4 HOH 158 2164 2164 HOH HOH A . D 4 HOH 159 2165 2165 HOH HOH A . D 4 HOH 160 2166 2166 HOH HOH A . D 4 HOH 161 2167 2167 HOH HOH A . D 4 HOH 162 2168 2168 HOH HOH A . D 4 HOH 163 2169 2169 HOH HOH A . D 4 HOH 164 2170 2170 HOH HOH A . D 4 HOH 165 2171 2171 HOH HOH A . D 4 HOH 166 2172 2172 HOH HOH A . D 4 HOH 167 2173 2173 HOH HOH A . D 4 HOH 168 2174 2174 HOH HOH A . D 4 HOH 169 2175 2175 HOH HOH A . D 4 HOH 170 2176 2176 HOH HOH A . D 4 HOH 171 2177 2177 HOH HOH A . D 4 HOH 172 2178 2178 HOH HOH A . D 4 HOH 173 2179 2179 HOH HOH A . D 4 HOH 174 2180 2180 HOH HOH A . D 4 HOH 175 2181 2181 HOH HOH A . D 4 HOH 176 2182 2182 HOH HOH A . D 4 HOH 177 2183 2183 HOH HOH A . D 4 HOH 178 2184 2184 HOH HOH A . D 4 HOH 179 2185 2185 HOH HOH A . D 4 HOH 180 2186 2186 HOH HOH A . D 4 HOH 181 2187 2187 HOH HOH A . D 4 HOH 182 2188 2188 HOH HOH A . D 4 HOH 183 2189 2189 HOH HOH A . D 4 HOH 184 2190 2190 HOH HOH A . D 4 HOH 185 2191 2191 HOH HOH A . D 4 HOH 186 2192 2192 HOH HOH A . D 4 HOH 187 2193 2193 HOH HOH A . D 4 HOH 188 2194 2194 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id PCA _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id PCA _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id GLU _pdbx_struct_mod_residue.details 'PYROGLUTAMIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3910 ? 1 MORE -57.2 ? 1 'SSA (A^2)' 12330 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 27.0550000000 -0.8660254038 -0.5000000000 0.0000000000 46.8606345988 0.0000000000 0.0000000000 -1.0000000000 30.2226666667 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2027 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O B C NO . ? A NO 1128 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 NA ? B HEC . ? A HEC 1127 ? 1_555 99.5 ? 2 O B C NO . ? A NO 1128 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 NB ? B HEC . ? A HEC 1127 ? 1_555 77.1 ? 3 NA ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 NB ? B HEC . ? A HEC 1127 ? 1_555 89.5 ? 4 O B C NO . ? A NO 1128 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 NC ? B HEC . ? A HEC 1127 ? 1_555 93.5 ? 5 NA ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 NC ? B HEC . ? A HEC 1127 ? 1_555 166.4 ? 6 NB ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 NC ? B HEC . ? A HEC 1127 ? 1_555 89.6 ? 7 O B C NO . ? A NO 1128 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 ND ? B HEC . ? A HEC 1127 ? 1_555 114.5 ? 8 NA ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 ND ? B HEC . ? A HEC 1127 ? 1_555 88.6 ? 9 NB ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 ND ? B HEC . ? A HEC 1127 ? 1_555 168.4 ? 10 NC ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 ND ? B HEC . ? A HEC 1127 ? 1_555 89.6 ? 11 O B C NO . ? A NO 1128 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N B C NO . ? A NO 1128 ? 1_555 24.7 ? 12 NA ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N B C NO . ? A NO 1128 ? 1_555 96.3 ? 13 NB ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N B C NO . ? A NO 1128 ? 1_555 101.6 ? 14 NC ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N B C NO . ? A NO 1128 ? 1_555 97.1 ? 15 ND ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N B C NO . ? A NO 1128 ? 1_555 90.1 ? 16 O B C NO . ? A NO 1128 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N A C NO . ? A NO 1128 ? 1_555 20.7 ? 17 NA ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N A C NO . ? A NO 1128 ? 1_555 101.2 ? 18 NB ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N A C NO . ? A NO 1128 ? 1_555 97.7 ? 19 NC ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N A C NO . ? A NO 1128 ? 1_555 92.4 ? 20 ND ? B HEC . ? A HEC 1127 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N A C NO . ? A NO 1128 ? 1_555 93.9 ? 21 N B C NO . ? A NO 1128 ? 1_555 FE ? B HEC . ? A HEC 1127 ? 1_555 N A C NO . ? A NO 1128 ? 1_555 6.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-10 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-03-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other 5 4 'Structure model' 'Polymer sequence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_poly 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_special_symmetry 4 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 2 4 'Structure model' '_pdbx_database_status.status_code_sf' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0066 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2XLO _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, ARG 124 TO GLU' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 106 ? ? O A HOH 2173 ? ? 1.84 2 1 NZ A LYS 92 ? B OD2 A ASP 111 ? ? 2.04 3 1 O A HOH 2062 ? ? O A HOH 2145 ? ? 2.08 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 119 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 119 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.693 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.119 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 88 ? ? CG A ASP 88 ? B OD2 A ASP 88 ? B 125.52 118.30 7.22 0.90 N 2 1 CA A CYS 116 ? ? CB A CYS 116 ? ? SG A CYS 116 ? ? 121.73 114.20 7.53 1.10 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 75 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id A _pdbx_validate_torsion.phi -114.68 _pdbx_validate_torsion.psi 60.99 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2141 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.86 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 31 ? NZ ? A LYS 31 NZ 2 1 Y 1 A LYS 80 ? CE ? A LYS 80 CE 3 1 Y 1 A LYS 80 ? NZ ? A LYS 80 NZ 4 1 Y 1 A GLN 84 ? CD ? A GLN 84 CD 5 1 Y 1 A GLN 84 ? NE2 ? A GLN 84 NE2 6 1 Y 1 A LYS 126 ? CB ? A LYS 126 CB 7 1 Y 1 A LYS 126 ? CG ? A LYS 126 CG 8 1 Y 1 A LYS 126 ? CD ? A LYS 126 CD 9 1 Y 1 A LYS 126 ? CE ? A LYS 126 CE 10 1 Y 1 A LYS 126 ? NZ ? A LYS 126 NZ 11 1 Y 1 A LYS 127 ? CA ? A LYS 127 CA 12 1 Y 1 A LYS 127 ? C ? A LYS 127 C 13 1 Y 1 A LYS 127 ? O ? A LYS 127 O 14 1 Y 1 A LYS 127 ? CB ? A LYS 127 CB 15 1 Y 1 A LYS 127 ? CG ? A LYS 127 CG 16 1 Y 1 A LYS 127 ? CD ? A LYS 127 CD 17 1 Y 1 A LYS 127 ? CE ? A LYS 127 CE 18 1 Y 1 A LYS 127 ? NZ ? A LYS 127 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'HEME C' HEC 3 'NITRIC OXIDE' NO 4 water HOH #