HEADER CHAPERONE 28-JUL-10 2XMK TITLE VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING SITES: TITLE 2 ATX1 SIDE-TO-SIDE (ANAEROBIC) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SSR2857 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATX1; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: 2 COPPER IONS PER MONOMER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP. PCC 6803; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 ATCC: 27184; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET29A KEYWDS CHAPERONE, COPPER HOMEOSTASIS, P-TYPE ATPASES, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.BADARAU,S.J.FIRBANK,A.A.MCCARTHY,M.J.BANFIELD,C.DENNISON REVDAT 3 20-DEC-23 2XMK 1 REMARK LINK REVDAT 2 18-MAY-11 2XMK 1 JRNL REMARK REVDAT 1 25-AUG-10 2XMK 0 JRNL AUTH A.BADARAU,S.J.FIRBANK,A.A.MCCARTHY,M.J.BANFIELD,C.DENNISON JRNL TITL VISUALIZING THE METAL-BINDING VERSATILITY OF COPPER JRNL TITL 2 TRAFFICKING SITES . JRNL REF BIOCHEMISTRY V. 49 7798 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20726513 JRNL DOI 10.1021/BI101064W REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 28177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.131 REMARK 3 R VALUE (WORKING SET) : 0.129 REMARK 3 FREE R VALUE : 0.153 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1443 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1984 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.1450 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.1890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 887 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 241 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.35000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : -0.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.34000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.046 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.043 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.024 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.251 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 936 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 561 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1294 ; 1.442 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1427 ; 1.006 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 142 ; 5.567 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 29 ;46.164 ;27.931 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 161 ;10.923 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 4.929 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 181 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1063 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 143 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 179 ; 0.232 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 611 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 469 ; 0.163 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 507 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 167 ; 0.155 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.098 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 6 ; 0.373 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 15 ; 0.180 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.113 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 3 ; 0.073 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 655 ; 1.694 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 261 ; 0.620 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1071 ; 2.721 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 281 ; 3.538 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 214 ; 5.476 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1497 ; 1.446 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 248 ; 7.026 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1486 ; 3.441 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2XMK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1290044833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29653 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 53.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2XMJ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24 % (W/V) PEG 8000, 200 MM SODIUM REMARK 280 ACETATE, 100 MM SODIUM CACODYLATE PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 31.49550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.85450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 31.49550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.85450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A1105 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1001 REMARK 465 MET B 2001 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1050 CD OE1 OE2 REMARK 470 GLU A1062 CG CD OE1 OE2 REMARK 470 GLU A1064 CD OE1 OE2 REMARK 470 GLU B2017 CD OE1 OE2 REMARK 470 GLU B2026 CD OE1 OE2 REMARK 470 GLU B2050 CG CD OE1 OE2 REMARK 470 GLU B2062 CG CD OE1 OE2 REMARK 470 GLU B2064 CD OE1 OE2 REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A3036 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH B3031 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH B3032 DISTANCE = 6.42 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A2101 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1012 SG REMARK 620 2 CYS A1015 SG 165.7 REMARK 620 3 CU B1101 CU 52.7 141.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B1101 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1012 SG REMARK 620 2 CL A1104 CL 101.0 REMARK 620 3 CL A1104 CL 106.4 7.5 REMARK 620 4 CU B1102 CU 103.3 145.8 145.0 REMARK 620 5 CYS B2012 SG 153.1 105.9 100.5 52.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A2102 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1015 SG REMARK 620 2 CL A1103 CL 109.2 REMARK 620 3 CYS B2015 SG 141.4 109.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1105 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A1027 OD1 REMARK 620 2 ASP A1027 OD1 170.0 REMARK 620 3 GLN A1029 OE1 90.1 88.1 REMARK 620 4 GLN A1029 OE1 86.8 89.2 145.8 REMARK 620 5 HOH A3069 O 89.2 100.6 112.7 101.2 REMARK 620 6 HOH A3069 O 100.4 89.6 102.8 111.2 14.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B1102 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B2012 SG REMARK 620 2 CYS B2015 SG 166.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 2101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 2102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1105 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SB6 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF A CYANOBACTERIAL COPPERMETALLOCHAPERONE, REMARK 900 SCATX1 REMARK 900 RELATED ID: 2XMT RELATED DB: PDB REMARK 900 COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU1 FORM) REMARK 900 RELATED ID: 2XMV RELATED DB: PDB REMARK 900 COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU1, TRIMERIC REMARK 900 FORM, HIS61TYR MUTANT) REMARK 900 RELATED ID: 2XMM RELATED DB: PDB REMARK 900 VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING REMARK 900 SITES: H61Y ATX1 SIDE-TO-SIDE REMARK 900 RELATED ID: 2XMJ RELATED DB: PDB REMARK 900 VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING REMARK 900 SITES: ATX1 SIDE-TO-SIDE (AEROBIC) REMARK 900 RELATED ID: 2XMU RELATED DB: PDB REMARK 900 COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU2 FORM) DBREF 2XMK A 1001 1064 UNP P73213 P73213_SYNY3 1 64 DBREF 2XMK B 2001 2064 UNP P73213 P73213_SYNY3 1 64 SEQRES 1 A 64 MET THR ILE GLN LEU THR VAL PRO THR ILE ALA CYS GLU SEQRES 2 A 64 ALA CYS ALA GLU ALA VAL THR LYS ALA VAL GLN ASN GLU SEQRES 3 A 64 ASP ALA GLN ALA THR VAL GLN VAL ASP LEU THR SER LYS SEQRES 4 A 64 LYS VAL THR ILE THR SER ALA LEU GLY GLU GLU GLN LEU SEQRES 5 A 64 ARG THR ALA ILE ALA SER ALA GLY HIS GLU VAL GLU SEQRES 1 B 64 MET THR ILE GLN LEU THR VAL PRO THR ILE ALA CYS GLU SEQRES 2 B 64 ALA CYS ALA GLU ALA VAL THR LYS ALA VAL GLN ASN GLU SEQRES 3 B 64 ASP ALA GLN ALA THR VAL GLN VAL ASP LEU THR SER LYS SEQRES 4 B 64 LYS VAL THR ILE THR SER ALA LEU GLY GLU GLU GLN LEU SEQRES 5 B 64 ARG THR ALA ILE ALA SER ALA GLY HIS GLU VAL GLU HET CL A1103 1 HET CL A1104 1 HET NA A1105 1 HET CU A2101 1 HET CU A2102 1 HET CU B1101 1 HET CU B1102 1 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM CU COPPER (II) ION FORMUL 3 CL 2(CL 1-) FORMUL 5 NA NA 1+ FORMUL 6 CU 4(CU 2+) FORMUL 10 HOH *241(H2 O) HELIX 1 1 CYS A 1012 ASN A 1025 1 14 HELIX 2 2 GLY A 1048 ALA A 1059 1 12 HELIX 3 3 CYS B 2012 ASN B 2025 1 14 HELIX 4 4 GLY B 2048 ALA B 2059 1 12 SHEET 1 AA 3 ILE A1003 THR A1006 0 SHEET 2 AA 3 LYS A1040 THR A1044 -1 O VAL A1041 N LEU A1005 SHEET 3 AA 3 THR A1031 VAL A1034 -1 O THR A1031 N THR A1044 SHEET 1 BA 3 ILE B2003 THR B2006 0 SHEET 2 BA 3 LYS B2040 THR B2044 -1 O VAL B2041 N LEU B2005 SHEET 3 BA 3 THR B2031 VAL B2034 -1 O THR B2031 N THR B2044 LINK SG CYS A1012 CU CU A2101 1555 1555 2.15 LINK SG CYS A1012 CU CU B1101 1555 1555 2.19 LINK SG CYS A1015 CU CU A2101 1555 1555 2.15 LINK SG CYS A1015 CU CU A2102 1555 1555 2.21 LINK OD1 ASP A1027 NA NA A1105 2556 1555 2.33 LINK OD1 ASP A1027 NA NA A1105 1555 1555 2.32 LINK OE1 GLN A1029 NA NA A1105 1555 1555 2.27 LINK OE1 GLN A1029 NA NA A1105 2556 1555 2.32 LINK CL CL A1103 CU CU A2102 1555 1555 2.36 LINK CL CL A1104 CU CU B1101 1555 1555 2.42 LINK CL CL A1104 CU CU B1101 2555 1555 2.36 LINK NA NA A1105 O HOH A3069 1555 2556 2.25 LINK NA NA A1105 O HOH A3069 1555 1555 2.24 LINK CU CU A2101 CU CU B1101 1555 1555 2.68 LINK CU CU A2102 SG CYS B2015 1555 1555 2.21 LINK CU CU B1101 CU CU B1102 1555 1555 2.65 LINK CU CU B1101 SG CYS B2012 1555 1555 2.19 LINK CU CU B1102 SG CYS B2012 1555 1555 2.17 LINK CU CU B1102 SG CYS B2015 1555 1555 2.13 SITE 1 AC1 5 CYS A1012 CYS A1015 CU A2102 CU B1101 SITE 2 AC1 5 CU B1102 SITE 1 AC2 5 CYS A1015 CL A1103 CU A2101 CU B1102 SITE 2 AC2 5 CYS B2015 SITE 1 AC3 5 CYS A1012 CL A1104 CU A2101 CU B1102 SITE 2 AC3 5 CYS B2012 SITE 1 AC4 5 CU A2101 CU A2102 CU B1101 CYS B2012 SITE 2 AC4 5 CYS B2015 SITE 1 AC5 5 CYS A1015 HIS A1061 CU A2102 CYS B2015 SITE 2 AC5 5 HIS B2061 SITE 1 AC6 4 CYS A1012 HOH A3010 CU B1101 CYS B2012 SITE 1 AC7 3 ASP A1027 GLN A1029 HOH A3069 CRYST1 62.991 41.709 55.791 90.00 107.49 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015875 0.000000 0.005002 0.00000 SCALE2 0.000000 0.023976 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018793 0.00000