data_2XNH # _entry.id 2XNH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2XNH PDBE EBI-44930 WWPDB D_1290044930 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1WF6 unspecified 'THE THIRD BRCA1 C-TERMINUS (BRCT) DOMAIN OF SIMILAR TOS.POMBE RAD4+/CUT5+ PRODUCT' PDB 2XNK unspecified 'STRUCTURE AND FUNCTION OF THE RAD9-BINDING REGION OF THE DNA DAMAGE CHECKPOINT ADAPTOR TOPBP1' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2XNH _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-08-02 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rappas, M.' 1 'Oliver, A.W.' 2 'Pearl, L.H.' 3 # _citation.id primary _citation.title 'Structure and Function of the Rad9-Binding Region of the DNA-Damage Checkpoint Adaptor Topbp1.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 39 _citation.page_first 313 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20724438 _citation.pdbx_database_id_DOI 10.1093/NAR/GKQ743 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Rappas, M.' 1 primary 'Oliver, A.W.' 2 primary 'Pearl, L.H.' 3 # _cell.entry_id 2XNH _cell.length_a 115.770 _cell.length_b 115.770 _cell.length_c 115.770 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XNH _symmetry.space_group_name_H-M 'P 21 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA TOPOISOMERASE 2-BINDING PROTEIN 1' 33861.984 1 ? ? 'BRCT 0,1 AND 2, RESIDUES 1-287' ? 2 non-polymer syn 'IODIDE ION' 126.904 17 ? ? ? ? 3 water nat water 18.015 71 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA TOPOISOMERASE II-BINDING PROTEIN 1, DNA TOPOISOMERASE II-BETA-BINDING PROTEIN 1, TOPBP1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SRNDKEPFFVKFLKSSDNSKCFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYICDPFSGVVFDHLKKLGC RIVGPQVVIFC(MSE)HHQRCVPRAEHPVYN(MSE)V(MSE)SDVTISCTSLEKEKREEVHKYVQ(MSE)(MSE)GGRVY RDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQEKKITRYTDIN(MSE)EDFKCPIFLGCIICVTGLCG LDRKEVQQLTVKHGGQY(MSE)GQLK(MSE)NECTHLIVQEPKGQKYECAKRWNVHCVTTQWFFDSIEKGFCQDESIYKT EPR ; _entity_poly.pdbx_seq_one_letter_code_can ;MSRNDKEPFFVKFLKSSDNSKCFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYICDPFSGVVFDHLKKLGCRIVG PQVVIFCMHHQRCVPRAEHPVYNMVMSDVTISCTSLEKEKREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAA NLKKPILLPSWIKTLWEKSQEKKITRYTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTH LIVQEPKGQKYECAKRWNVHCVTTQWFFDSIEKGFCQDESIYKTEPR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 ARG n 1 4 ASN n 1 5 ASP n 1 6 LYS n 1 7 GLU n 1 8 PRO n 1 9 PHE n 1 10 PHE n 1 11 VAL n 1 12 LYS n 1 13 PHE n 1 14 LEU n 1 15 LYS n 1 16 SER n 1 17 SER n 1 18 ASP n 1 19 ASN n 1 20 SER n 1 21 LYS n 1 22 CYS n 1 23 PHE n 1 24 PHE n 1 25 LYS n 1 26 ALA n 1 27 LEU n 1 28 GLU n 1 29 SER n 1 30 ILE n 1 31 LYS n 1 32 GLU n 1 33 PHE n 1 34 GLN n 1 35 SER n 1 36 GLU n 1 37 GLU n 1 38 TYR n 1 39 LEU n 1 40 GLN n 1 41 ILE n 1 42 ILE n 1 43 THR n 1 44 GLU n 1 45 GLU n 1 46 GLU n 1 47 ALA n 1 48 LEU n 1 49 LYS n 1 50 ILE n 1 51 LYS n 1 52 GLU n 1 53 ASN n 1 54 ASP n 1 55 ARG n 1 56 SER n 1 57 LEU n 1 58 TYR n 1 59 ILE n 1 60 CYS n 1 61 ASP n 1 62 PRO n 1 63 PHE n 1 64 SER n 1 65 GLY n 1 66 VAL n 1 67 VAL n 1 68 PHE n 1 69 ASP n 1 70 HIS n 1 71 LEU n 1 72 LYS n 1 73 LYS n 1 74 LEU n 1 75 GLY n 1 76 CYS n 1 77 ARG n 1 78 ILE n 1 79 VAL n 1 80 GLY n 1 81 PRO n 1 82 GLN n 1 83 VAL n 1 84 VAL n 1 85 ILE n 1 86 PHE n 1 87 CYS n 1 88 MSE n 1 89 HIS n 1 90 HIS n 1 91 GLN n 1 92 ARG n 1 93 CYS n 1 94 VAL n 1 95 PRO n 1 96 ARG n 1 97 ALA n 1 98 GLU n 1 99 HIS n 1 100 PRO n 1 101 VAL n 1 102 TYR n 1 103 ASN n 1 104 MSE n 1 105 VAL n 1 106 MSE n 1 107 SER n 1 108 ASP n 1 109 VAL n 1 110 THR n 1 111 ILE n 1 112 SER n 1 113 CYS n 1 114 THR n 1 115 SER n 1 116 LEU n 1 117 GLU n 1 118 LYS n 1 119 GLU n 1 120 LYS n 1 121 ARG n 1 122 GLU n 1 123 GLU n 1 124 VAL n 1 125 HIS n 1 126 LYS n 1 127 TYR n 1 128 VAL n 1 129 GLN n 1 130 MSE n 1 131 MSE n 1 132 GLY n 1 133 GLY n 1 134 ARG n 1 135 VAL n 1 136 TYR n 1 137 ARG n 1 138 ASP n 1 139 LEU n 1 140 ASN n 1 141 VAL n 1 142 SER n 1 143 VAL n 1 144 THR n 1 145 HIS n 1 146 LEU n 1 147 ILE n 1 148 ALA n 1 149 GLY n 1 150 GLU n 1 151 VAL n 1 152 GLY n 1 153 SER n 1 154 LYS n 1 155 LYS n 1 156 TYR n 1 157 LEU n 1 158 VAL n 1 159 ALA n 1 160 ALA n 1 161 ASN n 1 162 LEU n 1 163 LYS n 1 164 LYS n 1 165 PRO n 1 166 ILE n 1 167 LEU n 1 168 LEU n 1 169 PRO n 1 170 SER n 1 171 TRP n 1 172 ILE n 1 173 LYS n 1 174 THR n 1 175 LEU n 1 176 TRP n 1 177 GLU n 1 178 LYS n 1 179 SER n 1 180 GLN n 1 181 GLU n 1 182 LYS n 1 183 LYS n 1 184 ILE n 1 185 THR n 1 186 ARG n 1 187 TYR n 1 188 THR n 1 189 ASP n 1 190 ILE n 1 191 ASN n 1 192 MSE n 1 193 GLU n 1 194 ASP n 1 195 PHE n 1 196 LYS n 1 197 CYS n 1 198 PRO n 1 199 ILE n 1 200 PHE n 1 201 LEU n 1 202 GLY n 1 203 CYS n 1 204 ILE n 1 205 ILE n 1 206 CYS n 1 207 VAL n 1 208 THR n 1 209 GLY n 1 210 LEU n 1 211 CYS n 1 212 GLY n 1 213 LEU n 1 214 ASP n 1 215 ARG n 1 216 LYS n 1 217 GLU n 1 218 VAL n 1 219 GLN n 1 220 GLN n 1 221 LEU n 1 222 THR n 1 223 VAL n 1 224 LYS n 1 225 HIS n 1 226 GLY n 1 227 GLY n 1 228 GLN n 1 229 TYR n 1 230 MSE n 1 231 GLY n 1 232 GLN n 1 233 LEU n 1 234 LYS n 1 235 MSE n 1 236 ASN n 1 237 GLU n 1 238 CYS n 1 239 THR n 1 240 HIS n 1 241 LEU n 1 242 ILE n 1 243 VAL n 1 244 GLN n 1 245 GLU n 1 246 PRO n 1 247 LYS n 1 248 GLY n 1 249 GLN n 1 250 LYS n 1 251 TYR n 1 252 GLU n 1 253 CYS n 1 254 ALA n 1 255 LYS n 1 256 ARG n 1 257 TRP n 1 258 ASN n 1 259 VAL n 1 260 HIS n 1 261 CYS n 1 262 VAL n 1 263 THR n 1 264 THR n 1 265 GLN n 1 266 TRP n 1 267 PHE n 1 268 PHE n 1 269 ASP n 1 270 SER n 1 271 ILE n 1 272 GLU n 1 273 LYS n 1 274 GLY n 1 275 PHE n 1 276 CYS n 1 277 GLN n 1 278 ASP n 1 279 GLU n 1 280 SER n 1 281 ILE n 1 282 TYR n 1 283 LYS n 1 284 THR n 1 285 GLU n 1 286 PRO n 1 287 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'ROSETTA2(DE3)PLYSS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'POPINH8, PGEX6P1' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TOPB1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q92547 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2XNH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 287 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q92547 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 287 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 287 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2XNH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.84 _exptl_crystal.density_percent_sol 0.68 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M TRIS-HCL PH 6.8, 0.5M KI, 5% (V/V) GLYCEROL, 22.5% (W/V), 10% PEG 3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2009-06-20 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength 0.9795 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2XNH _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 51.77 _reflns.d_resolution_high 2.60 _reflns.number_obs 13035 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.90 _reflns.B_iso_Wilson_estimate 54.82 _reflns.pdbx_redundancy 5.93 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.50 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.52 _reflns_shell.pdbx_redundancy 6.09 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2XNH _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 24687 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.44 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.263 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.83 _refine.ls_R_factor_obs 0.2327 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2318 _refine.ls_R_factor_R_free 0.2513 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1254 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 58.70 _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.339 _refine.solvent_model_param_bsol 58.687 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 1.16 _refine.pdbx_overall_phase_error 23.97 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2280 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 71 _refine_hist.number_atoms_total 2368 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 47.263 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 2330 'X-RAY DIFFRACTION' ? f_angle_d 0.603 ? ? 3135 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.706 ? ? 875 'X-RAY DIFFRACTION' ? f_chiral_restr 0.041 ? ? 342 'X-RAY DIFFRACTION' ? f_plane_restr 0.002 ? ? 395 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.8004 2.9125 2648 0.2837 100.00 0.2923 . . 147 . . 'X-RAY DIFFRACTION' . 2.9125 3.0451 2592 0.2733 100.00 0.3070 . . 150 . . 'X-RAY DIFFRACTION' . 3.0451 3.2056 2606 0.2648 100.00 0.3063 . . 128 . . 'X-RAY DIFFRACTION' . 3.2056 3.4064 2609 0.2433 100.00 0.2821 . . 124 . . 'X-RAY DIFFRACTION' . 3.4064 3.6693 2584 0.2141 100.00 0.2499 . . 141 . . 'X-RAY DIFFRACTION' . 3.6693 4.0384 2596 0.1936 100.00 0.2338 . . 150 . . 'X-RAY DIFFRACTION' . 4.0384 4.6223 2605 0.1768 100.00 0.2128 . . 144 . . 'X-RAY DIFFRACTION' . 4.6223 5.8219 2603 0.1974 100.00 0.1702 . . 134 . . 'X-RAY DIFFRACTION' . 5.8219 47.2696 2590 0.2498 99.00 0.2562 . . 136 . . # _struct.entry_id 2XNH _struct.title 'Structure and function of the Rad9-binding region of the DNA damage checkpoint adaptor TopBP1' _struct.pdbx_descriptor 'DNA TOPOISOMERASE 2-BINDING PROTEIN 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2XNH _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'ISOMERASE, PHOSPHORYLATION, PROTEIN-PROTEIN INTERACTION, DNA REPAIR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? Q N N 2 ? R N N 2 ? S N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 21 ? GLU A 32 ? LYS A 21 GLU A 32 1 ? 12 HELX_P HELX_P2 2 SER A 35 ? GLU A 37 ? SER A 35 GLU A 37 5 ? 3 HELX_P HELX_P3 3 GLU A 44 ? ILE A 50 ? GLU A 44 ILE A 50 1 ? 7 HELX_P HELX_P4 4 GLY A 65 ? GLY A 75 ? GLY A 65 GLY A 75 1 ? 11 HELX_P HELX_P5 5 GLY A 80 ? GLN A 91 ? GLY A 80 GLN A 91 1 ? 12 HELX_P HELX_P6 6 GLU A 117 ? MSE A 131 ? GLU A 117 MSE A 131 1 ? 15 HELX_P HELX_P7 7 SER A 153 ? LEU A 162 ? SER A 153 LEU A 162 1 ? 10 HELX_P HELX_P8 8 LEU A 168 ? GLU A 181 ? LEU A 168 GLU A 181 1 ? 14 HELX_P HELX_P9 9 ARG A 186 ? ILE A 190 ? ARG A 186 ILE A 190 5 ? 5 HELX_P HELX_P10 10 ASN A 191 ? PHE A 195 ? ASN A 191 PHE A 195 5 ? 5 HELX_P HELX_P11 11 CYS A 211 ? HIS A 225 ? CYS A 211 HIS A 225 1 ? 15 HELX_P HELX_P12 12 GLY A 248 ? TRP A 257 ? GLY A 248 TRP A 257 1 ? 10 HELX_P HELX_P13 13 THR A 263 ? GLY A 274 ? THR A 263 GLY A 274 1 ? 12 HELX_P HELX_P14 14 ASP A 278 ? TYR A 282 ? ASP A 278 TYR A 282 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A CYS 87 C ? ? ? 1_555 A MSE 88 N ? ? A CYS 87 A MSE 88 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 88 C ? ? ? 1_555 A HIS 89 N ? ? A MSE 88 A HIS 89 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A ASN 103 C ? ? ? 1_555 A MSE 104 N ? ? A ASN 103 A MSE 104 1_555 ? ? ? ? ? ? ? 1.327 ? covale4 covale ? ? A MSE 104 C ? ? ? 1_555 A VAL 105 N ? ? A MSE 104 A VAL 105 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A VAL 105 C ? ? ? 1_555 A MSE 106 N ? ? A VAL 105 A MSE 106 1_555 ? ? ? ? ? ? ? 1.323 ? covale6 covale ? ? A MSE 106 C ? ? ? 1_555 A SER 107 N ? ? A MSE 106 A SER 107 1_555 ? ? ? ? ? ? ? 1.319 ? covale7 covale ? ? A GLN 129 C ? ? ? 1_555 A MSE 130 N ? ? A GLN 129 A MSE 130 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A MSE 130 C ? ? ? 1_555 A MSE 131 N ? ? A MSE 130 A MSE 131 1_555 ? ? ? ? ? ? ? 1.330 ? covale9 covale ? ? A MSE 131 C ? ? ? 1_555 A GLY 132 N ? ? A MSE 131 A GLY 132 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A ASN 191 C ? ? ? 1_555 A MSE 192 N ? ? A ASN 191 A MSE 192 1_555 ? ? ? ? ? ? ? 1.328 ? covale11 covale ? ? A MSE 192 C ? ? ? 1_555 A GLU 193 N ? ? A MSE 192 A GLU 193 1_555 ? ? ? ? ? ? ? 1.327 ? covale12 covale ? ? A TYR 229 C ? ? ? 1_555 A MSE 230 N ? ? A TYR 229 A MSE 230 1_555 ? ? ? ? ? ? ? 1.329 ? covale13 covale ? ? A MSE 230 C ? ? ? 1_555 A GLY 231 N ? ? A MSE 230 A GLY 231 1_555 ? ? ? ? ? ? ? 1.328 ? covale14 covale ? ? A LYS 234 C ? ? ? 1_555 A MSE 235 N ? ? A LYS 234 A MSE 235 1_555 ? ? ? ? ? ? ? 1.328 ? covale15 covale ? ? A MSE 235 C ? ? ? 1_555 A ASN 236 N ? ? A MSE 235 A ASN 236 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 19 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 19 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 20 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 20 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 4 ? AC ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AB 1 2 ? parallel AB 2 3 ? parallel AB 3 4 ? parallel AC 1 2 ? parallel AC 2 3 ? parallel AC 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 39 ? THR A 43 ? LEU A 39 THR A 43 AA 2 VAL A 11 ? LYS A 15 ? VAL A 11 LYS A 15 AA 3 LEU A 57 ? ILE A 59 ? LEU A 57 ILE A 59 AA 4 ARG A 77 ? VAL A 79 ? ARG A 77 VAL A 79 AB 1 ARG A 134 ? VAL A 135 ? ARG A 134 VAL A 135 AB 2 THR A 110 ? THR A 114 ? THR A 110 THR A 114 AB 3 HIS A 145 ? ALA A 148 ? HIS A 145 ALA A 148 AB 4 ILE A 166 ? LEU A 167 ? ILE A 166 LEU A 167 AC 1 GLN A 228 ? TYR A 229 ? GLN A 228 TYR A 229 AC 2 ILE A 204 ? VAL A 207 ? ILE A 204 VAL A 207 AC 3 HIS A 240 ? ILE A 242 ? HIS A 240 ILE A 242 AC 4 HIS A 260 ? VAL A 262 ? HIS A 260 VAL A 262 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLN A 40 ? N GLN A 40 O VAL A 11 ? O VAL A 11 AA 2 3 N LYS A 12 ? N LYS A 12 O LEU A 57 ? O LEU A 57 AA 3 4 N TYR A 58 ? N TYR A 58 O ARG A 77 ? O ARG A 77 AB 1 2 O ARG A 134 ? O ARG A 134 N ILE A 111 ? N ILE A 111 AB 2 3 N SER A 112 ? N SER A 112 O HIS A 145 ? O HIS A 145 AB 3 4 N ALA A 148 ? N ALA A 148 O LEU A 167 ? O LEU A 167 AC 1 2 O GLN A 228 ? O GLN A 228 N ILE A 205 ? N ILE A 205 AC 2 3 N CYS A 206 ? N CYS A 206 O HIS A 240 ? O HIS A 240 AC 3 4 N LEU A 241 ? N LEU A 241 O HIS A 260 ? O HIS A 260 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 1288' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1289' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE IOD A 1290' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1292' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE IOD A 1293' AC6 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1294' AC7 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1295' AC8 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1296' AC9 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1299' BC1 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1304' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 GLN A 129 ? GLN A 129 . ? 11_466 ? 2 AC1 2 VAL A 135 ? VAL A 135 . ? 11_466 ? 3 AC2 1 ARG A 137 ? ARG A 137 . ? 11_466 ? 4 AC3 3 CYS A 113 ? CYS A 113 . ? 1_555 ? 5 AC3 3 HIS A 125 ? HIS A 125 . ? 1_555 ? 6 AC3 3 ARG A 137 ? ARG A 137 . ? 11_466 ? 7 AC4 1 MSE A 192 ? MSE A 192 . ? 1_555 ? 8 AC5 3 ARG A 137 ? ARG A 137 . ? 11_466 ? 9 AC5 3 ARG A 137 ? ARG A 137 . ? 8_656 ? 10 AC5 3 ARG A 137 ? ARG A 137 . ? 1_555 ? 11 AC6 1 LYS A 72 ? LYS A 72 . ? 1_555 ? 12 AC7 1 PHE A 268 ? PHE A 268 . ? 1_555 ? 13 AC8 1 GLN A 249 ? GLN A 249 . ? 12_665 ? 14 AC9 1 LYS A 120 ? LYS A 120 . ? 1_555 ? 15 BC1 1 ARG A 92 ? ARG A 92 . ? 1_555 ? # _database_PDB_matrix.entry_id 2XNH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2XNH _atom_sites.fract_transf_matrix[1][1] 0.008638 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008638 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008638 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 ASN 4 4 ? ? ? A . n A 1 5 ASP 5 5 ? ? ? A . n A 1 6 LYS 6 6 ? ? ? A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 CYS 87 87 87 CYS CYS A . n A 1 88 MSE 88 88 88 MSE MSE A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 HIS 90 90 90 HIS HIS A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 HIS 99 99 99 HIS HIS A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 MSE 104 104 104 MSE MSE A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 MSE 106 106 106 MSE MSE A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 CYS 113 113 113 CYS CYS A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 HIS 125 125 125 HIS HIS A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 GLN 129 129 129 GLN GLN A . n A 1 130 MSE 130 130 130 MSE MSE A . n A 1 131 MSE 131 131 131 MSE MSE A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 TYR 136 136 136 TYR TYR A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 HIS 145 145 145 HIS HIS A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 LYS 155 155 155 LYS LYS A . n A 1 156 TYR 156 156 156 TYR TYR A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 PRO 169 169 169 PRO PRO A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 TRP 171 171 171 TRP TRP A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 THR 174 174 174 THR THR A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 TRP 176 176 176 TRP TRP A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 GLN 180 180 180 GLN GLN A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 ILE 184 184 184 ILE ILE A . n A 1 185 THR 185 185 185 THR THR A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 TYR 187 187 187 TYR TYR A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 ASP 189 189 189 ASP ASP A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 ASN 191 191 191 ASN ASN A . n A 1 192 MSE 192 192 192 MSE MSE A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 PHE 195 195 195 PHE PHE A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 CYS 197 197 197 CYS CYS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 CYS 203 203 203 CYS CYS A . n A 1 204 ILE 204 204 204 ILE ILE A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 CYS 206 206 206 CYS CYS A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 THR 208 208 208 THR THR A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 CYS 211 211 211 CYS CYS A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 ASP 214 214 214 ASP ASP A . n A 1 215 ARG 215 215 215 ARG ARG A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 GLN 220 220 220 GLN GLN A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 THR 222 222 222 THR THR A . n A 1 223 VAL 223 223 223 VAL VAL A . n A 1 224 LYS 224 224 224 LYS LYS A . n A 1 225 HIS 225 225 225 HIS HIS A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 GLN 228 228 228 GLN GLN A . n A 1 229 TYR 229 229 229 TYR TYR A . n A 1 230 MSE 230 230 230 MSE MSE A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLN 232 232 232 GLN GLN A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 MSE 235 235 235 MSE MSE A . n A 1 236 ASN 236 236 236 ASN ASN A . n A 1 237 GLU 237 237 237 GLU GLU A . n A 1 238 CYS 238 238 238 CYS CYS A . n A 1 239 THR 239 239 239 THR THR A . n A 1 240 HIS 240 240 240 HIS HIS A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 VAL 243 243 243 VAL VAL A . n A 1 244 GLN 244 244 244 GLN GLN A . n A 1 245 GLU 245 245 245 GLU GLU A . n A 1 246 PRO 246 246 246 PRO PRO A . n A 1 247 LYS 247 247 247 LYS LYS A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 GLN 249 249 249 GLN GLN A . n A 1 250 LYS 250 250 250 LYS LYS A . n A 1 251 TYR 251 251 251 TYR TYR A . n A 1 252 GLU 252 252 252 GLU GLU A . n A 1 253 CYS 253 253 253 CYS CYS A . n A 1 254 ALA 254 254 254 ALA ALA A . n A 1 255 LYS 255 255 255 LYS LYS A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 TRP 257 257 257 TRP TRP A . n A 1 258 ASN 258 258 258 ASN ASN A . n A 1 259 VAL 259 259 259 VAL VAL A . n A 1 260 HIS 260 260 260 HIS HIS A . n A 1 261 CYS 261 261 261 CYS CYS A . n A 1 262 VAL 262 262 262 VAL VAL A . n A 1 263 THR 263 263 263 THR THR A . n A 1 264 THR 264 264 264 THR THR A . n A 1 265 GLN 265 265 265 GLN GLN A . n A 1 266 TRP 266 266 266 TRP TRP A . n A 1 267 PHE 267 267 267 PHE PHE A . n A 1 268 PHE 268 268 268 PHE PHE A . n A 1 269 ASP 269 269 269 ASP ASP A . n A 1 270 SER 270 270 270 SER SER A . n A 1 271 ILE 271 271 271 ILE ILE A . n A 1 272 GLU 272 272 272 GLU GLU A . n A 1 273 LYS 273 273 273 LYS LYS A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 PHE 275 275 275 PHE PHE A . n A 1 276 CYS 276 276 276 CYS CYS A . n A 1 277 GLN 277 277 277 GLN GLN A . n A 1 278 ASP 278 278 278 ASP ASP A . n A 1 279 GLU 279 279 279 GLU GLU A . n A 1 280 SER 280 280 280 SER SER A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 TYR 282 282 282 TYR TYR A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 THR 284 284 284 THR THR A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 PRO 286 286 286 PRO PRO A . n A 1 287 ARG 287 287 287 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD 1 1288 1288 IOD IOD A . C 2 IOD 1 1289 1289 IOD IOD A . D 2 IOD 1 1290 1290 IOD IOD A . E 2 IOD 1 1291 1291 IOD IOD A . F 2 IOD 1 1292 1292 IOD IOD A . G 2 IOD 1 1293 1293 IOD IOD A . H 2 IOD 1 1294 1294 IOD IOD A . I 2 IOD 1 1295 1295 IOD IOD A . J 2 IOD 1 1296 1296 IOD IOD A . K 2 IOD 1 1297 1297 IOD IOD A . L 2 IOD 1 1298 1298 IOD IOD A . M 2 IOD 1 1299 1299 IOD IOD A . N 2 IOD 1 1301 1301 IOD IOD A . O 2 IOD 1 1302 1302 IOD IOD A . P 2 IOD 1 1303 1303 IOD IOD A . Q 2 IOD 1 1304 1304 IOD IOD A . R 2 IOD 1 1305 1305 IOD IOD A . S 3 HOH 1 2001 2001 HOH HOH A . S 3 HOH 2 2002 2002 HOH HOH A . S 3 HOH 3 2003 2003 HOH HOH A . S 3 HOH 4 2004 2004 HOH HOH A . S 3 HOH 5 2005 2005 HOH HOH A . S 3 HOH 6 2006 2006 HOH HOH A . S 3 HOH 7 2007 2007 HOH HOH A . S 3 HOH 8 2008 2008 HOH HOH A . S 3 HOH 9 2009 2009 HOH HOH A . S 3 HOH 10 2010 2010 HOH HOH A . S 3 HOH 11 2011 2011 HOH HOH A . S 3 HOH 12 2012 2012 HOH HOH A . S 3 HOH 13 2013 2013 HOH HOH A . S 3 HOH 14 2014 2014 HOH HOH A . S 3 HOH 15 2015 2015 HOH HOH A . S 3 HOH 16 2016 2016 HOH HOH A . S 3 HOH 17 2017 2017 HOH HOH A . S 3 HOH 18 2018 2018 HOH HOH A . S 3 HOH 19 2019 2019 HOH HOH A . S 3 HOH 20 2020 2020 HOH HOH A . S 3 HOH 21 2021 2021 HOH HOH A . S 3 HOH 22 2022 2022 HOH HOH A . S 3 HOH 23 2023 2023 HOH HOH A . S 3 HOH 24 2024 2024 HOH HOH A . S 3 HOH 25 2025 2025 HOH HOH A . S 3 HOH 26 2026 2026 HOH HOH A . S 3 HOH 27 2027 2027 HOH HOH A . S 3 HOH 28 2028 2028 HOH HOH A . S 3 HOH 29 2029 2029 HOH HOH A . S 3 HOH 30 2030 2030 HOH HOH A . S 3 HOH 31 2031 2031 HOH HOH A . S 3 HOH 32 2032 2032 HOH HOH A . S 3 HOH 33 2033 2033 HOH HOH A . S 3 HOH 34 2034 2034 HOH HOH A . S 3 HOH 35 2035 2035 HOH HOH A . S 3 HOH 36 2036 2036 HOH HOH A . S 3 HOH 37 2037 2037 HOH HOH A . S 3 HOH 38 2038 2038 HOH HOH A . S 3 HOH 39 2039 2039 HOH HOH A . S 3 HOH 40 2040 2040 HOH HOH A . S 3 HOH 41 2041 2041 HOH HOH A . S 3 HOH 42 2042 2042 HOH HOH A . S 3 HOH 43 2043 2043 HOH HOH A . S 3 HOH 44 2044 2044 HOH HOH A . S 3 HOH 45 2045 2045 HOH HOH A . S 3 HOH 46 2046 2046 HOH HOH A . S 3 HOH 47 2047 2047 HOH HOH A . S 3 HOH 48 2048 2048 HOH HOH A . S 3 HOH 49 2049 2049 HOH HOH A . S 3 HOH 50 2050 2050 HOH HOH A . S 3 HOH 51 2051 2051 HOH HOH A . S 3 HOH 52 2052 2052 HOH HOH A . S 3 HOH 53 2053 2053 HOH HOH A . S 3 HOH 54 2054 2054 HOH HOH A . S 3 HOH 55 2055 2055 HOH HOH A . S 3 HOH 56 2056 2056 HOH HOH A . S 3 HOH 57 2057 2057 HOH HOH A . S 3 HOH 58 2058 2058 HOH HOH A . S 3 HOH 59 2059 2059 HOH HOH A . S 3 HOH 60 2060 2060 HOH HOH A . S 3 HOH 61 2061 2061 HOH HOH A . S 3 HOH 62 2062 2062 HOH HOH A . S 3 HOH 63 2063 2063 HOH HOH A . S 3 HOH 64 2064 2064 HOH HOH A . S 3 HOH 65 2065 2065 HOH HOH A . S 3 HOH 66 2066 2066 HOH HOH A . S 3 HOH 67 2067 2067 HOH HOH A . S 3 HOH 68 2068 2068 HOH HOH A . S 3 HOH 69 2069 2069 HOH HOH A . S 3 HOH 70 2070 2070 HOH HOH A . S 3 HOH 71 2071 2071 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 88 A MSE 88 ? MET SELENOMETHIONINE 2 A MSE 104 A MSE 104 ? MET SELENOMETHIONINE 3 A MSE 106 A MSE 106 ? MET SELENOMETHIONINE 4 A MSE 130 A MSE 130 ? MET SELENOMETHIONINE 5 A MSE 131 A MSE 131 ? MET SELENOMETHIONINE 6 A MSE 192 A MSE 192 ? MET SELENOMETHIONINE 7 A MSE 230 A MSE 230 ? MET SELENOMETHIONINE 8 A MSE 235 A MSE 235 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A IOD 1293 ? G IOD . 2 1 A IOD 1302 ? O IOD . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-01 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 36.7922 67.4455 76.9068 0.2601 0.2027 0.4865 0.0210 -0.1510 0.0840 1.2581 2.2667 1.8348 -1.4352 1.3363 -2.4932 0.1374 -0.1004 -0.4722 -0.1710 0.3079 0.5065 0.1832 -0.2714 -0.3869 'X-RAY DIFFRACTION' 2 ? refined 37.6168 89.1427 62.3073 0.2174 0.2115 0.1284 0.0376 -0.0674 -0.0568 2.0077 2.7689 0.1099 -2.1588 0.3881 -0.1528 -0.0198 0.2025 -0.2981 -0.1590 0.0630 0.1271 0.0064 -0.1000 -0.0087 'X-RAY DIFFRACTION' 3 ? refined 33.6415 115.5118 50.8370 0.4533 0.3267 0.1830 0.1007 -0.0233 0.0793 0.7715 2.7296 0.7123 -1.8793 1.2928 -0.6665 0.1882 0.3153 0.0594 -0.7324 -0.2637 0.0443 0.0151 -0.0527 0.0478 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND RESID 6:103' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND RESID 104:198' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN A AND RESID 199:287' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 SHELX phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C A LYS 182 ? ? O A HOH 2049 ? ? 2.05 2 1 N A LYS 183 ? ? O A HOH 2049 ? ? 2.10 3 1 OE1 A GLU 36 ? ? O A HOH 2010 ? ? 2.17 4 1 OE2 A GLU 36 ? ? O A LEU 39 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 182 ? ? -66.50 75.25 2 1 GLU A 237 ? ? -144.39 -27.81 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 287 ? CG ? A ARG 287 CG 2 1 Y 1 A ARG 287 ? CD ? A ARG 287 CD 3 1 Y 1 A ARG 287 ? NE ? A ARG 287 NE 4 1 Y 1 A ARG 287 ? CZ ? A ARG 287 CZ 5 1 Y 1 A ARG 287 ? NH1 ? A ARG 287 NH1 6 1 Y 1 A ARG 287 ? NH2 ? A ARG 287 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A ASN 4 ? A ASN 4 5 1 Y 1 A ASP 5 ? A ASP 5 6 1 Y 1 A LYS 6 ? A LYS 6 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 water HOH #