HEADER DNA BINDING PROTEIN/DNA 09-AUG-10 2XO6 TITLE DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE Y132F MUTANT COMPLEXED WITH TITLE 2 LEFT END RECOGNITION AND CLEAVAGE SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSPOSASE; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: DRA2 TRANSPOSASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DRA2 TRANSPOSASE LEFT END RECOGNITION SEQUENCE; COMPND 9 CHAIN: B, E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 5'-D(*TP*TP*GP*AP*TP*G)-3'; COMPND 13 CHAIN: C, F; COMPND 14 SYNONYM: DRA2 TRANSPOSASE LEFT END CLEAVAGE SITE; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: DRA2 TRANSPOSON INTERNAL SEQUENCE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS DNA BINDING PROTEIN-DNA COMPLEX, TRANSPOSITION, MOBILE ELEMENT EXPDTA X-RAY DIFFRACTION AUTHOR A.B.HICKMAN,J.A.JAMES,O.BARABAS,C.PASTERNAK,B.TON-HOANG,M.CHANDLER, AUTHOR 2 S.SOMMER,F.DYDA REVDAT 4 20-DEC-23 2XO6 1 REMARK LINK REVDAT 3 08-MAY-19 2XO6 1 REMARK REVDAT 2 12-JAN-11 2XO6 1 JRNL REVDAT 1 13-OCT-10 2XO6 0 JRNL AUTH A.B.HICKMAN,J.A.JAMES,O.BARABAS,C.PASTERNAK,B.TON-HOANG, JRNL AUTH 2 M.CHANDLER,S.SOMMER,F.DYDA JRNL TITL DNA RECOGNITION AND THE PRECLEAVAGE STATE DURING JRNL TITL 2 SINGLE-STRANDED DNA TRANSPOSITION IN D. RADIODURANS. JRNL REF EMBO J. V. 29 3840 2010 JRNL REFN ISSN 0261-4189 JRNL PMID 20890269 JRNL DOI 10.1038/EMBOJ.2010.241 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 44616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 904 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2109 REMARK 3 NUCLEIC ACID ATOMS : 1338 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 403 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.97600 REMARK 3 B22 (A**2) : -3.00300 REMARK 3 B33 (A**2) : 0.02700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.019 REMARK 3 BOND ANGLES (DEGREES) : 1.957 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODE REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 42.54 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP_NOPUCKERS.PARAM REMARK 3 PARAMETER FILE 3 : CD6_XPLOR_H.PAR REMARK 3 PARAMETER FILE 4 : ACY_XPLOR.PAR REMARK 3 PARAMETER FILE 5 : PARAM19.SOL REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : CD6_XPLOR_H.TOP REMARK 3 TOPOLOGY FILE 4 : ACY_XPLOR.TOP REMARK 3 TOPOLOGY FILE 5 : TOPH19_MOD.SOL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AS THE CRYSTALS WERE GROWN IN THE REMARK 3 PRESENCE OF BOTH MG2+ AND CD2+, SOME METAL-ION BINDING SITES REMARK 3 CONTAINED BOTH AT THE SAME POSITION WITH PARTIAL OCCUPANCIES. REMARK 3 THIS WAS OBSERVED IN FO-FC DIFFERENCE MAPS AND ANOMALOUS REMARK 3 DIFFERENCE MAPS. REMARK 4 REMARK 4 2XO6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1290044987. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MULTILAYER MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44818 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.440 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.19000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.910 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2XM3 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: COMPLEX BUFFER: 35MM TRIS-HCL PH 8.0 REMARK 280 0.15M NACL, 10MM MGCL2, 0.5 MM TCEP. PRECIPITATING AGENT: 10MM REMARK 280 CDCL2, 0.1M NA-ACETATE PH 4.8, 14% PEG4000. PROTEIN AT 9MG/ML IN REMARK 280 COMPLEX BUFFER WAS MIXED WITH LE27 AND T5G. PROTEIN AND DNA REMARK 280 OLIGONUCLEOTIDES WERE MIXED IN THE RATIO 1:1.1:1.3. EQUAL REMARK 280 VOLUMES OF THIS COMPLEX AND PRECIPITATING AGENT WAS MIXED AT 19 REMARK 280 C. CRYOPROTECTION IN 20% V/V GLYCEROL., TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.15400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.14850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.45750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.14850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.15400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.45750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -154.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, TYR 132 TO PHE REMARK 400 ENGINEERED RESIDUE IN CHAIN D, TYR 132 TO PHE REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 TYR A 3 REMARK 465 VAL A 4 REMARK 465 ILE A 5 REMARK 465 LEU A 6 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 TYR D 3 REMARK 465 VAL D 4 REMARK 465 ILE D 5 REMARK 465 LEU D 6 REMARK 465 PRO D 7 REMARK 465 LEU D 8 REMARK 465 HIS D 137 REMARK 465 ASP D 138 REMARK 465 LYS D 139 REMARK 465 GLU D 140 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 140 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N3 DC B 11 N2 DG E 12 2565 2.14 REMARK 500 O2 DC B 11 N2 DG E 12 2565 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC B 15 N1 DC B 15 C2 0.067 REMARK 500 HIS D 69 NE2 HIS D 69 CD2 -0.084 REMARK 500 DG E 12 C2 DG E 12 N3 -0.053 REMARK 500 DG E 12 N9 DG E 12 C4 -0.073 REMARK 500 DG E 12 C2 DG E 12 N2 -0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG B 22 O5' - P - OP2 ANGL. DEV. = -7.0 DEGREES REMARK 500 DA B 32 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT C 1 O5' - C5' - C4' ANGL. DEV. = -7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 -22.09 -143.57 REMARK 500 ASP A 138 53.18 -112.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DA B 16 0.06 SIDE CHAIN REMARK 500 DA B 28 0.07 SIDE CHAIN REMARK 500 DT B 30 0.09 SIDE CHAIN REMARK 500 DG E 12 0.06 SIDE CHAIN REMARK 500 DC E 24 0.06 SIDE CHAIN REMARK 500 DT E 30 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1007 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 9 OE1 REMARK 620 2 GLU A 9 OE2 46.0 REMARK 620 3 GLU A 38 OE1 84.9 71.6 REMARK 620 4 GLU A 38 OE2 129.2 114.3 47.3 REMARK 620 5 GLU A 123 OE1 115.1 160.3 117.0 81.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1143 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 9 OE2 REMARK 620 2 GLU A 9 OE1 46.0 REMARK 620 3 GLU A 38 OE2 114.3 129.3 REMARK 620 4 GLU A 38 OE1 71.7 85.0 47.3 REMARK 620 5 GLU A 123 OE1 160.4 115.1 81.2 116.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1004 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 41 OD1 REMARK 620 2 ASP A 41 OD2 51.1 REMARK 620 3 DC B 27 O2 157.3 132.0 REMARK 620 4 DC B 27 N3 141.8 91.2 51.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1142 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 41 OD1 REMARK 620 2 ASP A 41 OD2 51.0 REMARK 620 3 DC B 27 O2 158.0 130.5 REMARK 620 4 DC B 27 N3 140.5 89.9 51.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1006 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 66 OD1 REMARK 620 2 ASP A 66 OD2 47.4 REMARK 620 3 HOH A2017 O 95.3 91.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1001 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 NE2 REMARK 620 2 HIS A 69 NE2 97.6 REMARK 620 3 DT C 5 O3' 78.9 93.1 REMARK 620 4 DG C 6 OP1 130.7 89.0 52.0 REMARK 620 5 GLN D 136 OE1 113.2 93.9 165.1 115.0 REMARK 620 6 HOH D2106 O 84.6 177.6 86.2 88.7 86.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1002 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 114 O REMARK 620 2 DC B 31 OP2 86.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1141 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 114 O REMARK 620 2 DC B 31 OP2 87.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1001 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 136 OE1 REMARK 620 2 MET D 64 SD 83.2 REMARK 620 3 HIS D 67 NE2 157.4 80.7 REMARK 620 4 HIS D 69 NE2 99.8 91.7 96.5 REMARK 620 5 DG F 6 OP1 81.0 164.2 114.6 90.3 REMARK 620 6 HOH F2010 O 79.7 97.3 86.7 170.8 80.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2006 O REMARK 620 2 HOH B2009 O 88.6 REMARK 620 3 HOH B2026 O 92.1 95.4 REMARK 620 4 HOH B2081 O 89.2 176.6 82.2 REMARK 620 5 HOH B2082 O 172.3 88.4 95.2 94.2 REMARK 620 6 HOH B2083 O 87.2 88.8 175.8 93.6 85.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD E1002 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 41 OD2 REMARK 620 2 ASP D 41 OD1 49.1 REMARK 620 3 DT E 26 OP1 104.2 97.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E1039 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 41 OD2 REMARK 620 2 ASP D 41 OD1 49.1 REMARK 620 3 DT E 26 OP1 104.7 97.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1004 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 45 OD2 REMARK 620 2 ASP D 45 OD1 45.8 REMARK 620 3 ASP D 49 OD1 114.6 106.3 REMARK 620 4 ASP D 49 OD2 86.1 112.9 47.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D1137 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 45 OD1 REMARK 620 2 ASP D 45 OD2 46.0 REMARK 620 3 ASP D 49 OD1 106.8 113.4 REMARK 620 4 ASP D 49 OD2 112.0 84.4 46.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1002 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO D 114 O REMARK 620 2 DC E 31 OP2 85.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E1038 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO D 114 O REMARK 620 2 DC E 31 OP2 85.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH E2003 O REMARK 620 2 HOH E2022 O 87.1 REMARK 620 3 HOH E2072 O 83.5 88.8 REMARK 620 4 HOH E2074 O 170.9 90.1 87.8 REMARK 620 5 HOH E2075 O 90.2 176.3 93.4 92.9 REMARK 620 6 HOH E2078 O 95.3 87.7 176.3 93.2 90.1 REMARK 620 N 1 2 3 4 5 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD E 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1141 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1142 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1143 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 1137 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 1138 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 1038 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 1039 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XM3 RELATED DB: PDB REMARK 900 DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE LEFT END DNA COMPLEX REMARK 900 RELATED ID: 2XMA RELATED DB: PDB REMARK 900 DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE RIGHT END DNA COMPLEX REMARK 999 REMARK 999 SEQUENCE REMARK 999 TRANSPOSASE HAS Y132F MUTATION. REMARK 999 DNA DERIVES FROM DEINOCOCCUS RADIODURANS IDRA2 TRANPOSON REMARK 999 INTERNAL SEQUENCE DBREF 2XO6 A 1 140 UNP O83028 O83028_DEIRA 1 140 DBREF 2XO6 B 11 37 PDB 2XO6 2XO6 11 37 DBREF 2XO6 C 1 6 PDB 2XO6 2XO6 1 6 DBREF 2XO6 D 1 140 UNP O83028 O83028_DEIRA 1 140 DBREF 2XO6 E 11 37 PDB 2XO6 2XO6 11 37 DBREF 2XO6 F 1 6 PDB 2XO6 2XO6 1 6 SEQADV 2XO6 PHE A 132 UNP O83028 TYR 132 ENGINEERED MUTATION SEQADV 2XO6 PHE D 132 UNP O83028 TYR 132 ENGINEERED MUTATION SEQRES 1 A 140 MET THR TYR VAL ILE LEU PRO LEU GLU MET LYS LYS GLY SEQRES 2 A 140 ARG GLY TYR VAL TYR GLN LEU GLU TYR HIS LEU ILE TRP SEQRES 3 A 140 CYS VAL LYS TYR ARG HIS GLN VAL LEU VAL GLY GLU VAL SEQRES 4 A 140 ALA ASP GLY LEU LYS ASP ILE LEU ARG ASP ILE ALA ALA SEQRES 5 A 140 GLN ASN GLY LEU GLU VAL ILE THR MET GLU VAL MET PRO SEQRES 6 A 140 ASP HIS VAL HIS LEU LEU LEU SER ALA THR PRO GLN GLN SEQRES 7 A 140 ALA ILE PRO ASP PHE VAL LYS ALA LEU LYS GLY ALA SER SEQRES 8 A 140 ALA ARG ARG MET PHE VAL ALA TYR PRO GLN LEU LYS GLU SEQRES 9 A 140 LYS LEU TRP GLY GLY ASN LEU TRP ASN PRO SER TYR CYS SEQRES 10 A 140 ILE LEU THR VAL SER GLU ASN THR ARG ALA GLN ILE GLN SEQRES 11 A 140 LYS PHE ILE GLU SER GLN HIS ASP LYS GLU SEQRES 1 B 27 DC DG DC DA DC DA DC DT DC DG DT DG DA SEQRES 2 B 27 DC DT DT DC DA DG DT DC DA DT DG DA DG SEQRES 3 B 27 DT SEQRES 1 C 6 DT DT DG DA DT DG SEQRES 1 D 140 MET THR TYR VAL ILE LEU PRO LEU GLU MET LYS LYS GLY SEQRES 2 D 140 ARG GLY TYR VAL TYR GLN LEU GLU TYR HIS LEU ILE TRP SEQRES 3 D 140 CYS VAL LYS TYR ARG HIS GLN VAL LEU VAL GLY GLU VAL SEQRES 4 D 140 ALA ASP GLY LEU LYS ASP ILE LEU ARG ASP ILE ALA ALA SEQRES 5 D 140 GLN ASN GLY LEU GLU VAL ILE THR MET GLU VAL MET PRO SEQRES 6 D 140 ASP HIS VAL HIS LEU LEU LEU SER ALA THR PRO GLN GLN SEQRES 7 D 140 ALA ILE PRO ASP PHE VAL LYS ALA LEU LYS GLY ALA SER SEQRES 8 D 140 ALA ARG ARG MET PHE VAL ALA TYR PRO GLN LEU LYS GLU SEQRES 9 D 140 LYS LEU TRP GLY GLY ASN LEU TRP ASN PRO SER TYR CYS SEQRES 10 D 140 ILE LEU THR VAL SER GLU ASN THR ARG ALA GLN ILE GLN SEQRES 11 D 140 LYS PHE ILE GLU SER GLN HIS ASP LYS GLU SEQRES 1 E 27 DC DG DC DA DC DA DC DT DC DG DT DG DA SEQRES 2 E 27 DC DT DT DC DA DG DT DC DA DT DG DA DG SEQRES 3 E 27 DT SEQRES 1 F 6 DT DT DG DA DT DG HET CD A1001 1 HET CD A1002 1 HET CD A1004 1 HET CD A1006 1 HET CD A1007 1 HET MG A1141 1 HET MG A1142 1 HET MG A1143 1 HET MG B1001 1 HET CD D1001 1 HET CD D1002 1 HET CD D1004 1 HET MG D1137 1 HET ACT D1138 4 HET MG E1001 1 HET CD E1002 1 HET MG E1038 1 HET MG E1039 1 HETNAM CD CADMIUM ION HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION FORMUL 7 CD 9(CD 2+) FORMUL 12 MG 8(MG 2+) FORMUL 20 ACT C2 H3 O2 1- FORMUL 25 HOH *403(H2 O) HELIX 1 1 LYS A 29 HIS A 32 5 4 HELIX 2 2 VAL A 36 ASN A 54 1 19 HELIX 3 3 ALA A 79 TYR A 99 1 21 HELIX 4 4 PRO A 100 LYS A 105 5 6 HELIX 5 5 THR A 125 SER A 135 1 11 HELIX 6 6 LYS D 29 HIS D 32 5 4 HELIX 7 7 VAL D 36 ASN D 54 1 19 HELIX 8 8 ALA D 79 TYR D 99 1 21 HELIX 9 9 PRO D 100 LYS D 105 5 6 HELIX 10 10 THR D 125 GLN D 136 1 12 SHEET 1 AA 4 LYS A 11 GLY A 13 0 SHEET 2 AA 4 TYR A 16 CYS A 27 -1 O TYR A 16 N GLY A 13 SHEET 3 AA 4 TYR D 116 VAL D 121 1 O TYR D 116 N VAL A 17 SHEET 4 AA 4 TYR D 16 CYS D 27 -1 O GLU D 21 N VAL D 121 SHEET 1 AB 2 LYS A 11 GLY A 13 0 SHEET 2 AB 2 TYR A 16 CYS A 27 -1 O TYR A 16 N GLY A 13 LINK OE1 GLU A 9 CD A CD A1007 1555 1555 2.91 LINK OE2 GLU A 9 CD A CD A1007 1555 1555 2.69 LINK OE2 GLU A 9 MG B MG A1143 1555 1555 2.69 LINK OE1 GLU A 9 MG B MG A1143 1555 1555 2.91 LINK OE1 GLU A 38 CD A CD A1007 4555 1555 2.60 LINK OE2 GLU A 38 CD A CD A1007 4555 1555 2.85 LINK OE2 GLU A 38 MG B MG A1143 4555 1555 2.85 LINK OE1 GLU A 38 MG B MG A1143 4555 1555 2.60 LINK OD1 ASP A 41 CD A CD A1004 1555 1555 2.43 LINK OD2 ASP A 41 CD A CD A1004 1555 1555 2.64 LINK OD1 ASP A 41 MG B MG A1142 1555 1555 2.41 LINK OD2 ASP A 41 MG B MG A1142 1555 1555 2.65 LINK OD1 ASP A 66 CD CD A1006 1555 1555 2.65 LINK OD2 ASP A 66 CD CD A1006 1555 1555 2.84 LINK NE2 HIS A 67 CD CD A1001 1555 1555 2.27 LINK NE2 HIS A 69 CD CD A1001 1555 1555 2.30 LINK O PRO A 114 CD A CD A1002 1555 1555 2.18 LINK O PRO A 114 MG B MG A1141 1555 1555 2.17 LINK OE1 GLU A 123 CD A CD A1007 1555 1555 2.62 LINK OE1 GLU A 123 MG B MG A1143 1555 1555 2.62 LINK OE1 GLN A 136 CD CD D1001 1555 1555 2.38 LINK CD CD A1001 O3' DT C 5 1555 1555 3.01 LINK CD CD A1001 OP1 DG C 6 1555 1555 2.32 LINK CD CD A1001 OE1 GLN D 136 1555 1555 2.14 LINK CD CD A1001 O HOH D2106 1555 1555 2.48 LINK CD A CD A1002 OP2 DC B 31 1555 1555 2.16 LINK CD A CD A1004 O2 DC B 27 1555 4555 2.71 LINK CD A CD A1004 N3 DC B 27 1555 4555 2.26 LINK CD CD A1006 O HOH A2017 1555 1555 2.27 LINK MG B MG A1141 OP2 DC B 31 1555 1555 2.15 LINK MG B MG A1142 O2 DC B 27 1555 4555 2.73 LINK MG B MG A1142 N3 DC B 27 1555 4555 2.29 LINK MG MG B1001 O HOH B2006 1555 1555 2.05 LINK MG MG B1001 O HOH B2009 1555 1555 1.85 LINK MG MG B1001 O HOH B2026 1555 1555 2.00 LINK MG MG B1001 O HOH B2081 1555 1555 2.17 LINK MG MG B1001 O HOH B2082 1555 1555 2.13 LINK MG MG B1001 O HOH B2083 1555 1555 2.12 LINK OD2 ASP D 41 CD A CD E1002 4465 1555 2.75 LINK OD1 ASP D 41 CD A CD E1002 4465 1555 2.38 LINK OD2 ASP D 41 MG B MG E1039 4465 1555 2.74 LINK OD1 ASP D 41 MG B MG E1039 4465 1555 2.39 LINK OD2 ASP D 45 CD A CD D1004 1555 1555 2.68 LINK OD1 ASP D 45 CD A CD D1004 1555 1555 2.93 LINK OD1 ASP D 45 MG B MG D1137 1555 1555 2.90 LINK OD2 ASP D 45 MG B MG D1137 1555 1555 2.70 LINK OD1 ASP D 49 CD A CD D1004 1555 1555 2.82 LINK OD2 ASP D 49 CD A CD D1004 1555 1555 2.72 LINK OD1 ASP D 49 MG B MG D1137 1555 1555 2.84 LINK OD2 ASP D 49 MG B MG D1137 1555 1555 2.79 LINK SD MET D 64 CD CD D1001 1555 1555 2.91 LINK NE2 HIS D 67 CD CD D1001 1555 1555 2.33 LINK NE2 HIS D 69 CD CD D1001 1555 1555 2.34 LINK O PRO D 114 CD A CD D1002 1555 1555 2.23 LINK O PRO D 114 MG B MG E1038 1555 1555 2.23 LINK CD CD D1001 OP1 DG F 6 1555 1555 2.32 LINK CD CD D1001 O HOH F2010 1555 1555 2.42 LINK CD A CD D1002 OP2 DC E 31 1555 1555 2.13 LINK OP1 DT E 26 CD A CD E1002 1555 1555 2.30 LINK OP1 DT E 26 MG B MG E1039 1555 1555 2.29 LINK OP2 DC E 31 MG B MG E1038 1555 1555 2.14 LINK MG MG E1001 O HOH E2003 1555 1555 2.11 LINK MG MG E1001 O HOH E2022 1555 1555 2.00 LINK MG MG E1001 O HOH E2072 1555 1555 2.29 LINK MG MG E1001 O HOH E2074 1555 1555 1.86 LINK MG MG E1001 O HOH E2075 1555 1555 1.93 LINK MG MG E1001 O HOH E2078 1555 1555 1.91 SITE 1 AC1 6 HIS A 67 HIS A 69 DT C 5 DG C 6 SITE 2 AC1 6 GLN D 136 HOH D2106 SITE 1 AC2 10 PRO A 114 DC B 31 HOH B2066 HOH B2069 SITE 2 AC2 10 HOH B2072 HOH B2073 HOH B2074 HOH B2075 SITE 3 AC2 10 HOH B2076 HOH B2077 SITE 1 AC3 10 ASP A 41 HOH A2030 HOH A2032 HOH A2034 SITE 2 AC3 10 HOH A2035 DC B 27 HOH B2054 HOH B2055 SITE 3 AC3 10 HOH B2056 HOH B2057 SITE 1 AC4 2 ASP A 66 HOH A2017 SITE 1 AC5 4 PRO A 7 GLU A 9 GLU A 38 GLU A 123 SITE 1 AC6 7 GLN A 136 MET D 64 HIS D 67 HIS D 69 SITE 2 AC6 7 DT F 5 DG F 6 HOH F2010 SITE 1 AC7 10 PRO D 114 DC E 31 HOH E2056 HOH E2057 SITE 2 AC7 10 HOH E2060 HOH E2061 HOH E2062 HOH E2063 SITE 3 AC7 10 HOH E2065 HOH E2066 SITE 1 AC8 7 HIS A 137 ASP D 45 ASP D 49 HOH D2038 SITE 2 AC8 7 HOH D2039 HOH D2045 HOH D2046 SITE 1 AC9 8 ASP D 41 HOH D2028 HOH D2029 HOH D2032 SITE 2 AC9 8 HOH D2033 DT E 26 HOH E2041 HOH E2042 SITE 1 BC1 10 PRO A 114 DC B 31 HOH B2066 HOH B2069 SITE 2 BC1 10 HOH B2072 HOH B2073 HOH B2074 HOH B2075 SITE 3 BC1 10 HOH B2076 HOH B2077 SITE 1 BC2 10 ASP A 41 HOH A2030 HOH A2032 HOH A2034 SITE 2 BC2 10 HOH A2035 DC B 27 HOH B2054 HOH B2055 SITE 3 BC2 10 HOH B2056 HOH B2057 SITE 1 BC3 4 PRO A 7 GLU A 9 GLU A 38 GLU A 123 SITE 1 BC4 6 HOH B2006 HOH B2009 HOH B2026 HOH B2081 SITE 2 BC4 6 HOH B2082 HOH B2083 SITE 1 BC5 7 HIS A 137 ASP D 45 ASP D 49 HOH D2038 SITE 2 BC5 7 HOH D2039 HOH D2045 HOH D2046 SITE 1 BC6 1 TRP D 107 SITE 1 BC7 6 HOH E2003 HOH E2022 HOH E2072 HOH E2074 SITE 2 BC7 6 HOH E2075 HOH E2078 SITE 1 BC8 10 PRO D 114 DC E 31 HOH E2056 HOH E2057 SITE 2 BC8 10 HOH E2060 HOH E2061 HOH E2062 HOH E2063 SITE 3 BC8 10 HOH E2065 HOH E2066 SITE 1 BC9 8 ASP D 41 HOH D2028 HOH D2029 HOH D2032 SITE 2 BC9 8 HOH D2033 DT E 26 HOH E2041 HOH E2042 CRYST1 50.308 86.915 128.297 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019878 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011505 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007794 0.00000