HEADER METAL BINDING PROTEIN 03-SEP-10 2XQN TITLE COMPLEX OF THE 2ND AND 3RD LIM DOMAINS OF TES WITH THE EVH1 DOMAIN OF TITLE 2 MENA AND THE N-TERMINAL DOMAIN OF ACTIN-LIKE PROTEIN ARP7A COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN-LIKE PROTEIN 7A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, RESIDUES 1-65; COMPND 5 SYNONYM: ARP7A, ACTIN-LIKE-7-ALPHA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ENABLED HOMOLOG; COMPND 9 CHAIN: M; COMPND 10 FRAGMENT: EVH1 DOMAIN, RESIDUES 1-115; COMPND 11 SYNONYM: MENA; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: TESTIN; COMPND 15 CHAIN: T; COMPND 16 FRAGMENT: LIM DOMAINS 2 AND 3, RESIDUES 296-421; COMPND 17 SYNONYM: TESS; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: FB810; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMW172; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: FB810; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PMW172; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 25 EXPRESSION_SYSTEM_STRAIN: FB810; SOURCE 26 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 27 EXPRESSION_SYSTEM_PLASMID: PMW172 KEYWDS METAL-BINDING PROTEIN, CYTOSKELETON, FOCAL ADHESION, ACROSOME, METAL KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.P.KNOWLES,D.C.BRIGGS,J.MURRAY-RUST,N.Q.MCDONALD REVDAT 8 20-DEC-23 2XQN 1 REMARK LINK REVDAT 7 08-MAY-19 2XQN 1 REMARK REVDAT 6 28-FEB-18 2XQN 1 AUTHOR JRNL REVDAT 5 28-JUN-17 2XQN 1 REMARK REVDAT 4 24-AUG-11 2XQN 1 HEADER KEYWDS JRNL REMARK REVDAT 4 2 1 VERSN REVDAT 3 06-APR-11 2XQN 1 TITLE JRNL REVDAT 2 09-FEB-11 2XQN 1 JRNL REVDAT 1 26-JAN-11 2XQN 0 JRNL AUTH B.BOEDA,P.P.KNOWLES,D.C.BRIGGS,J.MURRAY-RUST,E.SORIANO, JRNL AUTH 2 B.K.GARVALOV,N.Q.MCDONALD,M.WAY JRNL TITL MOLECULAR RECOGNITION OF THE TES LIM2-3 DOMAINS BY THE JRNL TITL 2 ACTIN-RELATED PROTEIN ARP7A. JRNL REF J. BIOL. CHEM. V. 286 11543 2011 JRNL REFN ESSN 1083-351X JRNL PMID 21278383 JRNL DOI 10.1074/JBC.M110.171264 REMARK 2 REMARK 2 RESOLUTION. 2.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 11400 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 565 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.62 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 786 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.4070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2035 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 49 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.22000 REMARK 3 B22 (A**2) : 4.20000 REMARK 3 B33 (A**2) : -2.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.477 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.306 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.239 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.816 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2106 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2841 ; 1.894 ; 1.914 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 262 ; 8.970 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 97 ;37.621 ;24.124 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 339 ;18.024 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;20.525 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 305 ; 0.139 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1600 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1310 ; 0.805 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2104 ; 1.557 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 796 ; 2.240 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 736 ; 3.715 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 2XQN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-SEP-10. REMARK 100 THE DEPOSITION ID IS D_1290044197. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12008 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 25.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2IYB REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 37.5 MG/ML OF PROTEIN COMPLEX REMARK 280 IN 20MM TRIS-HCL PH 8.0, 100MM NACL RESERVOIR: 17.5 PEG 8K, REMARK 280 0.1MTRIS PH 8.5, 0.15M KSCN SITTING DROPS 2:1 PROTEIN:RESERVOIR, REMARK 280 22 DEG C CRYOPROTECTANT: N-PARATONE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.91450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.63300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.39550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.63300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.91450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.39550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, M, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TRP A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 PRO A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 ILE A 8 REMARK 465 MET A 9 REMARK 465 GLY A 10 REMARK 465 ASP A 11 REMARK 465 GLY A 12 REMARK 465 PRO A 13 REMARK 465 THR A 14 REMARK 465 LYS A 15 REMARK 465 LYS A 16 REMARK 465 VAL A 17 REMARK 465 GLY A 18 REMARK 465 ASN A 19 REMARK 465 GLN A 20 REMARK 465 ALA A 21 REMARK 465 PRO A 22 REMARK 465 LEU A 23 REMARK 465 GLN A 24 REMARK 465 THR A 25 REMARK 465 GLN A 26 REMARK 465 ALA A 27 REMARK 465 GLU A 50 REMARK 465 PRO A 51 REMARK 465 GLN A 52 REMARK 465 GLU A 53 REMARK 465 PRO A 54 REMARK 465 THR A 55 REMARK 465 GLU A 56 REMARK 465 SER A 57 REMARK 465 LYS A 58 REMARK 465 ALA A 59 REMARK 465 ALA A 60 REMARK 465 LYS A 61 REMARK 465 GLU A 62 REMARK 465 ARG A 63 REMARK 465 PRO A 64 REMARK 465 LYS A 65 REMARK 465 GLN M 114 REMARK 465 GLU M 115 REMARK 465 THR M 116 REMARK 465 SER T 296 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 29 OE1 NE2 REMARK 470 LYS M 22 CE NZ REMARK 470 ARG M 51 CZ NH1 NH2 REMARK 470 GLN M 57 CD OE1 NE2 REMARK 470 LYS M 69 CD CE NZ REMARK 470 ARG M 81 CZ NH1 NH2 REMARK 470 ARG M 84 CZ NH1 NH2 REMARK 470 SER M 113 OG REMARK 470 GLU T 297 CG CD OE1 OE2 REMARK 470 LYS T 346 CD CE NZ REMARK 470 LYS T 355 CD CE NZ REMARK 470 LYS T 402 CE NZ REMARK 470 LYS T 418 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 32 O HOH A 2001 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA M -1 -137.45 -117.50 REMARK 500 MET M 1 49.21 -89.17 REMARK 500 LYS M 21 60.71 62.03 REMARK 500 LYS M 22 127.82 -170.48 REMARK 500 HIS M 56 -3.05 67.43 REMARK 500 ASN M 61 93.55 -169.12 REMARK 500 LYS M 66 -37.77 -38.18 REMARK 500 ASP M 82 -153.87 -112.86 REMARK 500 GLN M 85 147.32 -176.50 REMARK 500 ASN M 112 -69.05 -101.30 REMARK 500 ASN T 318 29.39 81.85 REMARK 500 ALA T 358 -122.97 68.65 REMARK 500 VAL T 359 96.72 37.40 REMARK 500 ASN T 378 -125.23 53.95 REMARK 500 PHE T 389 78.36 -100.12 REMARK 500 SER T 395 -2.12 66.90 REMARK 500 GLU T 407 -112.05 50.56 REMARK 500 ARG T 419 -178.42 -61.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA M -2 ALA M -1 -147.77 REMARK 500 HIS T 357 ALA T 358 147.63 REMARK 500 ALA T 358 VAL T 359 -140.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN T1426 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 46 ND1 REMARK 620 2 CYS T 393 SG 119.6 REMARK 620 3 CYS T 416 SG 97.6 108.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN T1422 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS T 301 SG REMARK 620 2 CYS T 304 SG 104.6 REMARK 620 3 HIS T 322 ND1 109.2 104.8 REMARK 620 4 HIS T 325 ND1 118.6 108.9 109.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN T1423 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS T 328 SG REMARK 620 2 CYS T 331 SG 113.4 REMARK 620 3 CYS T 349 SG 119.9 103.0 REMARK 620 4 CYS T 352 SG 102.6 112.2 105.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN T1424 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS T 361 SG REMARK 620 2 CYS T 364 SG 111.0 REMARK 620 3 HIS T 383 ND1 103.0 100.1 REMARK 620 4 CYS T 388 SG 113.9 116.6 110.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN T1425 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS T 391 SG REMARK 620 2 CYS T 394 SG 104.5 REMARK 620 3 CYS T 412 SG 114.2 113.4 REMARK 620 4 CYS T 416 SG 109.8 122.4 92.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN T 1422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN T 1423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN T 1424 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN T 1425 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN T 1426 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2IYB RELATED DB: PDB REMARK 900 STRUCTURE OF COMPLEX BETWEEN THE 3RD LIM DOMAIN OF TES AND THE EVH1 REMARK 900 DOMAIN OF MENA DBREF 2XQN A 1 65 UNP Q9Y615 ACL7A_HUMAN 1 65 DBREF 2XQN M 1 116 UNP Q8N8S7 ENAH_HUMAN 571 686 DBREF 2XQN T 296 421 UNP Q9UGI8 TES_HUMAN 287 412 SEQADV 2XQN ALA M -2 UNP Q8N8S7 EXPRESSION TAG SEQADV 2XQN ALA M -1 UNP Q8N8S7 EXPRESSION TAG SEQADV 2XQN ARG M 0 UNP Q8N8S7 EXPRESSION TAG SEQRES 1 A 65 MET TRP ALA PRO PRO ALA ALA ILE MET GLY ASP GLY PRO SEQRES 2 A 65 THR LYS LYS VAL GLY ASN GLN ALA PRO LEU GLN THR GLN SEQRES 3 A 65 ALA LEU GLN THR ALA SER LEU ARG ASP GLY PRO ALA LYS SEQRES 4 A 65 ARG ALA VAL TRP VAL ARG HIS THR SER SER GLU PRO GLN SEQRES 5 A 65 GLU PRO THR GLU SER LYS ALA ALA LYS GLU ARG PRO LYS SEQRES 1 M 119 ALA ALA ARG MET SER GLU GLN SER ILE CYS GLN ALA ARG SEQRES 2 M 119 ALA ALA VAL MET VAL TYR ASP ASP ALA ASN LYS LYS TRP SEQRES 3 M 119 VAL PRO ALA GLY GLY SER THR GLY PHE SER ARG VAL HIS SEQRES 4 M 119 ILE TYR HIS HIS THR GLY ASN ASN THR PHE ARG VAL VAL SEQRES 5 M 119 GLY ARG LYS ILE GLN ASP HIS GLN VAL VAL ILE ASN CYS SEQRES 6 M 119 ALA ILE PRO LYS GLY LEU LYS TYR ASN GLN ALA THR GLN SEQRES 7 M 119 THR PHE HIS GLN TRP ARG ASP ALA ARG GLN VAL TYR GLY SEQRES 8 M 119 LEU ASN PHE GLY SER LYS GLU ASP ALA ASN VAL PHE ALA SEQRES 9 M 119 SER ALA MET MET HIS ALA LEU GLU VAL LEU ASN SER GLN SEQRES 10 M 119 GLU THR SEQRES 1 T 126 SER GLU LYS PRO ARG CYS ALA GLY CYS ASP GLU LEU ILE SEQRES 2 T 126 PHE SER ASN GLU TYR THR GLN ALA GLU ASN GLN ASN TRP SEQRES 3 T 126 HIS LEU LYS HIS PHE CYS CYS PHE ASP CYS ASP SER ILE SEQRES 4 T 126 LEU ALA GLY GLU ILE TYR VAL MET VAL ASN ASP LYS PRO SEQRES 5 T 126 VAL CYS LYS PRO CYS TYR VAL LYS ASN HIS ALA VAL VAL SEQRES 6 T 126 CYS GLN GLY CYS HIS ASN ALA ILE ASP PRO GLU VAL GLN SEQRES 7 T 126 ARG VAL THR TYR ASN ASN PHE SER TRP HIS ALA SER THR SEQRES 8 T 126 GLU CYS PHE LEU CYS SER CYS CYS SER LYS CYS LEU ILE SEQRES 9 T 126 GLY GLN LYS PHE MET PRO VAL GLU GLY MET VAL PHE CYS SEQRES 10 T 126 SER VAL GLU CYS LYS LYS ARG MET SER HET ZN T1422 1 HET ZN T1423 1 HET ZN T1424 1 HET ZN T1425 1 HET ZN T1426 1 HETNAM ZN ZINC ION FORMUL 4 ZN 5(ZN 2+) FORMUL 9 HOH *49(H2 O) HELIX 1 1 GLY M 27 SER M 29 5 3 HELIX 2 2 SER M 93 SER M 113 1 21 HELIX 3 3 HIS T 322 PHE T 326 5 5 HELIX 4 4 LYS T 350 HIS T 357 1 8 HELIX 5 5 SER T 413 ARG T 419 1 7 SHEET 1 AA 3 GLN A 29 THR A 30 0 SHEET 2 AA 3 LYS T 402 VAL T 406 -1 O PHE T 403 N GLN A 29 SHEET 3 AA 3 MET T 409 PHE T 411 -1 O MET T 409 N VAL T 406 SHEET 1 AB 3 LEU A 33 ARG A 34 0 SHEET 2 AB 3 ARG T 374 TYR T 377 -1 O ARG T 374 N ARG A 34 SHEET 3 AB 3 PHE T 380 HIS T 383 -1 O PHE T 380 N TYR T 377 SHEET 1 AC 3 LYS A 39 ARG A 40 0 SHEET 2 AC 3 ILE T 339 VAL T 343 -1 O TYR T 340 N LYS A 39 SHEET 3 AC 3 LYS T 346 CYS T 349 -1 O LYS T 346 N VAL T 343 SHEET 1 AD 3 VAL A 42 VAL A 44 0 SHEET 2 AD 3 TYR T 313 ALA T 316 -1 O TYR T 313 N VAL A 44 SHEET 3 AD 3 GLN T 319 TRP T 321 -1 O GLN T 319 N ALA T 316 SHEET 1 MA 2 LYS M 22 PRO M 25 0 SHEET 2 MA 2 GLU M 3 ASP M 17 -1 O VAL M 15 N VAL M 24 SHEET 1 MB 5 VAL M 58 ALA M 63 0 SHEET 2 MB 5 THR M 45 LYS M 52 -1 O VAL M 48 N CYS M 62 SHEET 3 MB 5 SER M 33 HIS M 40 -1 O ARG M 34 N ARG M 51 SHEET 4 MB 5 GLU M 3 ASP M 17 -1 O GLN M 4 N HIS M 39 SHEET 5 MB 5 LYS M 22 PRO M 25 -1 O LYS M 22 N ASP M 17 SHEET 1 MC 6 VAL M 58 ALA M 63 0 SHEET 2 MC 6 THR M 45 LYS M 52 -1 O VAL M 48 N CYS M 62 SHEET 3 MC 6 SER M 33 HIS M 40 -1 O ARG M 34 N ARG M 51 SHEET 4 MC 6 GLU M 3 ASP M 17 -1 O GLN M 4 N HIS M 39 SHEET 5 MC 6 VAL M 86 PHE M 91 -1 O VAL M 86 N TYR M 16 SHEET 6 MC 6 PHE M 77 ARG M 81 -1 O HIS M 78 N LEU M 89 LINK ND1 HIS A 46 ZN ZN T1426 4445 1555 2.19 LINK SG CYS T 301 ZN ZN T1422 1555 1555 2.33 LINK SG CYS T 304 ZN ZN T1422 1555 1555 2.31 LINK ND1 HIS T 322 ZN ZN T1422 1555 1555 2.09 LINK ND1 HIS T 325 ZN ZN T1422 1555 1555 2.15 LINK SG CYS T 328 ZN ZN T1423 1555 1555 2.32 LINK SG CYS T 331 ZN ZN T1423 1555 1555 2.32 LINK SG CYS T 349 ZN ZN T1423 1555 1555 2.32 LINK SG CYS T 352 ZN ZN T1423 1555 1555 2.36 LINK SG CYS T 361 ZN ZN T1424 1555 1555 2.31 LINK SG CYS T 364 ZN ZN T1424 1555 1555 2.25 LINK ND1 HIS T 383 ZN ZN T1424 1555 1555 2.14 LINK SG CYS T 388 ZN ZN T1424 1555 1555 2.31 LINK SG CYS T 391 ZN ZN T1425 1555 1555 2.31 LINK SG CYS T 393 ZN ZN T1426 1555 1555 2.33 LINK SG CYS T 394 ZN ZN T1425 1555 1555 2.30 LINK SG CYS T 412 ZN ZN T1425 1555 1555 2.31 LINK SG CYS T 416 ZN ZN T1425 1555 1555 2.37 LINK SG CYS T 416 ZN ZN T1426 1555 1555 2.35 SITE 1 AC1 4 CYS T 301 CYS T 304 HIS T 322 HIS T 325 SITE 1 AC2 4 CYS T 328 CYS T 331 CYS T 349 CYS T 352 SITE 1 AC3 4 CYS T 361 CYS T 364 HIS T 383 CYS T 388 SITE 1 AC4 4 CYS T 391 CYS T 394 CYS T 412 CYS T 416 SITE 1 AC5 4 HIS A 46 CYS T 393 CYS T 416 HOH T2027 CRYST1 37.829 86.791 115.266 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026435 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011522 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008676 0.00000