data_2XR5 # _entry.id 2XR5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2XR5 pdb_00002xr5 10.2210/pdb2xr5/pdb PDBE EBI-45251 ? ? WWPDB D_1290045251 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2B6B unspecified 'CRYO EM STRUCTURE OF DENGUE COMPLEXED WITH CRD OF DC -SIGN' PDB 2XR6 unspecified 'CRYSTAL STRUCTURE OF THE COMPLEX OF THE CARBOHYDRATE RECOGNITION DOMAIN OF HUMAN DC-SIGN WITH PSEUDO TRIMANNOSIDE MIMIC.' PDB 1SL4 unspecified 'CRYSTAL STRUCTURE OF DC-SIGN CARBOHYDRATE RECOGNITIONDOMAIN COMPLEXED WITH MAN4' PDB 1K9I unspecified 'COMPLEX OF DC-SIGN AND GLCNAC2MAN3' PDB 1SL5 unspecified 'CRYSTAL STRUCTURE OF DC-SIGN CARBOHYDRATE RECOGNITIONDOMAIN COMPLEXED WITH LNFP III (DEXTRA L504).' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2XR5 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-09-10 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thepaut, M.' 1 'Suitkeviciute, I.' 2 'Sattin, S.' 3 'Reina, J.' 4 'Bernardi, A.' 5 'Fieschi, F.' 6 # _citation.id primary _citation.title ;Structure of a Glycomimetic Ligand in the Carbohydrate Recognition Domain of C-Type Lectin Dc-Sign. Structural Requirements for Selectivity and Ligand Design. ; _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 135 _citation.page_first 2518 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23360500 _citation.pdbx_database_id_DOI 10.1021/JA3053305 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thepaut, M.' 1 ? primary 'Guzzi, C.' 2 ? primary 'Sutkeviciute, I.' 3 ? primary 'Sattin, S.' 4 ? primary 'Ribeiro-Viana, R.' 5 ? primary 'Varga, N.' 6 ? primary 'Chabrol, E.' 7 ? primary 'Rojo, J.' 8 ? primary 'Bernardi, A.' 9 ? primary 'Angulo, J.' 10 ? primary 'Nieto, P.M.' 11 ? primary 'Fieschi, F.' 12 ? # _cell.entry_id 2XR5 _cell.length_a 71.450 _cell.length_b 71.450 _cell.length_c 52.670 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XR5 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CD209 ANTIGEN' 19031.984 1 ? ? 'CARBOHYDRATE RECOGNITION DOMAIN, RESIDUES 254-404' ? 2 non-polymer man alpha-D-mannopyranose 180.156 1 ? ? ? ? 3 non-polymer syn 'dimethyl (1S,2S,4S,5S)-4,5-dihydroxycyclohexane-1,2-dicarboxylate' 232.230 1 ? ? ? ? 4 non-polymer syn ETHANOLAMINE 61.083 1 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 7 water nat water 18.015 166 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;DC-SIGN, DENDRITIC CELL-SPECIFIC ICAM-3-GRABBING NON-INTEGRIN 1, DC-SIGN1, C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER L, CD209, MDC-SIGN1A TYPE I ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASWSHPQFEKIEGRHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGL SDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPAT PNPPPA ; _entity_poly.pdbx_seq_one_letter_code_can ;MASWSHPQFEKIEGRHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGL SDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPAT PNPPPA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 TRP n 1 5 SER n 1 6 HIS n 1 7 PRO n 1 8 GLN n 1 9 PHE n 1 10 GLU n 1 11 LYS n 1 12 ILE n 1 13 GLU n 1 14 GLY n 1 15 ARG n 1 16 HIS n 1 17 PRO n 1 18 CYS n 1 19 PRO n 1 20 TRP n 1 21 GLU n 1 22 TRP n 1 23 THR n 1 24 PHE n 1 25 PHE n 1 26 GLN n 1 27 GLY n 1 28 ASN n 1 29 CYS n 1 30 TYR n 1 31 PHE n 1 32 MET n 1 33 SER n 1 34 ASN n 1 35 SER n 1 36 GLN n 1 37 ARG n 1 38 ASN n 1 39 TRP n 1 40 HIS n 1 41 ASP n 1 42 SER n 1 43 ILE n 1 44 THR n 1 45 ALA n 1 46 CYS n 1 47 LYS n 1 48 GLU n 1 49 VAL n 1 50 GLY n 1 51 ALA n 1 52 GLN n 1 53 LEU n 1 54 VAL n 1 55 VAL n 1 56 ILE n 1 57 LYS n 1 58 SER n 1 59 ALA n 1 60 GLU n 1 61 GLU n 1 62 GLN n 1 63 ASN n 1 64 PHE n 1 65 LEU n 1 66 GLN n 1 67 LEU n 1 68 GLN n 1 69 SER n 1 70 SER n 1 71 ARG n 1 72 SER n 1 73 ASN n 1 74 ARG n 1 75 PHE n 1 76 THR n 1 77 TRP n 1 78 MET n 1 79 GLY n 1 80 LEU n 1 81 SER n 1 82 ASP n 1 83 LEU n 1 84 ASN n 1 85 GLN n 1 86 GLU n 1 87 GLY n 1 88 THR n 1 89 TRP n 1 90 GLN n 1 91 TRP n 1 92 VAL n 1 93 ASP n 1 94 GLY n 1 95 SER n 1 96 PRO n 1 97 LEU n 1 98 LEU n 1 99 PRO n 1 100 SER n 1 101 PHE n 1 102 LYS n 1 103 GLN n 1 104 TYR n 1 105 TRP n 1 106 ASN n 1 107 ARG n 1 108 GLY n 1 109 GLU n 1 110 PRO n 1 111 ASN n 1 112 ASN n 1 113 VAL n 1 114 GLY n 1 115 GLU n 1 116 GLU n 1 117 ASP n 1 118 CYS n 1 119 ALA n 1 120 GLU n 1 121 PHE n 1 122 SER n 1 123 GLY n 1 124 ASN n 1 125 GLY n 1 126 TRP n 1 127 ASN n 1 128 ASP n 1 129 ASP n 1 130 LYS n 1 131 CYS n 1 132 ASN n 1 133 LEU n 1 134 ALA n 1 135 LYS n 1 136 PHE n 1 137 TRP n 1 138 ILE n 1 139 CYS n 1 140 LYS n 1 141 LYS n 1 142 SER n 1 143 ALA n 1 144 ALA n 1 145 SER n 1 146 CYS n 1 147 SER n 1 148 ARG n 1 149 ASP n 1 150 GLU n 1 151 GLU n 1 152 GLN n 1 153 PHE n 1 154 LEU n 1 155 SER n 1 156 PRO n 1 157 ALA n 1 158 PRO n 1 159 ALA n 1 160 THR n 1 161 PRO n 1 162 ASN n 1 163 PRO n 1 164 PRO n 1 165 PRO n 1 166 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PASK-IBA7PLUS _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CD209_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9NNX6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2XR5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 16 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NNX6 _struct_ref_seq.db_align_beg 254 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 404 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 254 _struct_ref_seq.pdbx_auth_seq_align_end 404 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2XR5 MET A 1 ? UNP Q9NNX6 ? ? 'expression tag' 239 1 1 2XR5 ALA A 2 ? UNP Q9NNX6 ? ? 'expression tag' 240 2 1 2XR5 SER A 3 ? UNP Q9NNX6 ? ? 'expression tag' 241 3 1 2XR5 TRP A 4 ? UNP Q9NNX6 ? ? 'expression tag' 242 4 1 2XR5 SER A 5 ? UNP Q9NNX6 ? ? 'expression tag' 243 5 1 2XR5 HIS A 6 ? UNP Q9NNX6 ? ? 'expression tag' 244 6 1 2XR5 PRO A 7 ? UNP Q9NNX6 ? ? 'expression tag' 245 7 1 2XR5 GLN A 8 ? UNP Q9NNX6 ? ? 'expression tag' 246 8 1 2XR5 PHE A 9 ? UNP Q9NNX6 ? ? 'expression tag' 247 9 1 2XR5 GLU A 10 ? UNP Q9NNX6 ? ? 'expression tag' 248 10 1 2XR5 LYS A 11 ? UNP Q9NNX6 ? ? 'expression tag' 249 11 1 2XR5 ILE A 12 ? UNP Q9NNX6 ? ? 'expression tag' 250 12 1 2XR5 GLU A 13 ? UNP Q9NNX6 ? ? 'expression tag' 251 13 1 2XR5 GLY A 14 ? UNP Q9NNX6 ? ? 'expression tag' 252 14 1 2XR5 ARG A 15 ? UNP Q9NNX6 ? ? 'expression tag' 253 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 07B non-polymer . 'dimethyl (1S,2S,4S,5S)-4,5-dihydroxycyclohexane-1,2-dicarboxylate' ? 'C10 H16 O6' 232.230 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 ETA 'L-peptide COOH carboxy terminus' . ETHANOLAMINE ? 'C2 H7 N O' 61.083 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2XR5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.8 _exptl_crystal.density_percent_sol 31 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, HANGING DROP, 293K. 20% PEG 3350, 200 MM NACL, 100 MM CACODYLATE PH 6.5, CRYOPROTECTED IN PARATONE-N.' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-11-23 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'CHANNEL-CUT SILICON MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9809 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.9809 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2XR5 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 42.41 _reflns.d_resolution_high 1.42 _reflns.number_obs 25925 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.13 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.67 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 25.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.42 _reflns_shell.d_res_low 1.46 _reflns_shell.percent_possible_all 92.4 _reflns_shell.Rmerge_I_obs 0.58 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.56 _reflns_shell.pdbx_redundancy 7.22 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2XR5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 24628 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.41 _refine.ls_d_res_high 1.42 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.14954 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14838 _refine.ls_R_factor_R_free 0.17113 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1297 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.962 _refine.B_iso_mean 13.125 _refine.aniso_B[1][1] 0.08 _refine.aniso_B[2][2] 0.08 _refine.aniso_B[3][3] -0.17 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY.' _refine.pdbx_starting_model 'PDB ENTRY 2IT6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.059 _refine.pdbx_overall_ESU_R_Free 0.059 _refine.overall_SU_ML 0.033 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.843 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1064 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 166 _refine_hist.number_atoms_total 1266 _refine_hist.d_res_high 1.42 _refine_hist.d_res_low 42.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.021 ? 1291 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.553 1.915 ? 1779 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.865 5.000 ? 176 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.118 25.417 ? 72 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.676 15.000 ? 208 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.542 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.114 0.200 ? 179 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.014 0.021 ? 1040 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.269 0.2 ? 621 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.317 0.2 ? 843 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.201 0.2 ? 125 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.048 0.2 ? 5 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.244 0.2 ? 59 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.231 0.2 ? 13 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.497 1.500 ? 738 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.659 2.000 ? 1194 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.554 3.000 ? 553 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.978 4.500 ? 561 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.424 _refine_ls_shell.d_res_low 1.461 _refine_ls_shell.number_reflns_R_work 1672 _refine_ls_shell.R_factor_R_work 0.175 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.214 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 88 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2XR5 _struct.title 'Crystal structure of the complex of the carbohydrate recognition domain of human DC-SIGN with pseudo dimannoside mimic.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2XR5 _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 7 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 38 ? VAL A 49 ? ASN A 276 VAL A 287 1 ? 12 HELX_P HELX_P2 2 SER A 58 ? ASN A 73 ? SER A 296 ASN A 311 1 ? 16 HELX_P HELX_P3 3 LEU A 98 ? TYR A 104 ? LEU A 336 TYR A 342 5 ? 7 HELX_P HELX_P4 4 ALA A 144 ? CYS A 146 ? ALA A 382 CYS A 384 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 18 SG ? ? ? 1_555 A CYS 29 SG A ? A CYS 256 A CYS 267 1_555 ? ? ? ? ? ? ? 2.099 ? ? disulf2 disulf ? ? A CYS 46 SG ? ? ? 1_555 A CYS 139 SG A ? A CYS 284 A CYS 377 1_555 ? ? ? ? ? ? ? 2.139 ? ? disulf3 disulf ? ? A CYS 46 SG ? ? ? 1_555 A CYS 139 SG B ? A CYS 284 A CYS 377 1_555 ? ? ? ? ? ? ? 2.997 ? ? disulf4 disulf ? ? A CYS 118 SG ? ? ? 1_555 A CYS 131 SG A ? A CYS 356 A CYS 369 1_555 ? ? ? ? ? ? ? 2.018 ? ? covale1 covale both ? B MAN . O1 ? ? ? 1_555 C 07B . CBJ ? ? A MAN 1384 A 07B 1385 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale2 covale one ? C 07B . CBK ? ? ? 1_555 D ETA . O ? ? A 07B 1385 A ETA 1386 1_555 ? ? ? ? ? ? ? 1.432 ? ? metalc1 metalc ? ? A ASP 82 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 320 A CA 1388 1_555 ? ? ? ? ? ? ? 2.542 ? ? metalc2 metalc ? ? A ASP 82 OD1 ? ? ? 1_555 F CA . CA ? ? A ASP 320 A CA 1388 1_555 ? ? ? ? ? ? ? 2.564 ? ? metalc3 metalc ? ? A GLU 86 OE1 ? ? ? 1_555 F CA . CA ? ? A GLU 324 A CA 1388 1_555 ? ? ? ? ? ? ? 2.406 ? ? metalc4 metalc ? ? A GLU 86 OE2 ? ? ? 1_555 F CA . CA ? ? A GLU 324 A CA 1388 1_555 ? ? ? ? ? ? ? 2.535 ? ? metalc5 metalc ? ? A GLU 86 OE1 ? ? ? 1_555 G CA . CA ? ? A GLU 324 A CA 1389 1_555 ? ? ? ? ? ? ? 2.355 ? ? metalc6 metalc ? ? A GLU 109 OE1 ? ? ? 1_555 E CA . CA ? ? A GLU 347 A CA 1387 1_555 ? ? ? ? ? ? ? 2.523 ? ? metalc7 metalc ? ? A ASN 111 OD1 ? ? ? 1_555 E CA . CA ? ? A ASN 349 A CA 1387 1_555 ? ? ? ? ? ? ? 2.399 ? ? metalc8 metalc ? ? A ASN 112 OD1 ? ? ? 1_555 F CA . CA ? ? A ASN 350 A CA 1388 1_555 ? ? ? ? ? ? ? 2.404 ? ? metalc9 metalc ? ? A GLU 115 OE1 ? ? ? 1_555 G CA . CA ? ? A GLU 353 A CA 1389 1_555 ? ? ? ? ? ? ? 2.355 ? ? metalc10 metalc ? ? A GLU 116 OE1 ? ? ? 1_555 E CA . CA ? ? A GLU 354 A CA 1387 1_555 ? ? ? ? ? ? ? 2.404 ? ? metalc11 metalc ? ? A GLU 116 O ? ? ? 1_555 F CA . CA ? ? A GLU 354 A CA 1388 1_555 ? ? ? ? ? ? ? 2.421 ? ? metalc12 metalc ? ? A ASP 117 OD1 ? ? ? 1_555 F CA . CA ? ? A ASP 355 A CA 1388 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc13 metalc ? ? A ASP 117 OD1 ? ? ? 1_555 G CA . CA ? ? A ASP 355 A CA 1389 1_555 ? ? ? ? ? ? ? 2.565 ? ? metalc14 metalc ? ? A ASP 117 OD2 ? ? ? 1_555 G CA . CA ? ? A ASP 355 A CA 1389 1_555 ? ? ? ? ? ? ? 2.531 ? ? metalc15 metalc ? ? A ASN 127 OD1 ? ? ? 1_555 E CA . CA ? ? A ASN 365 A CA 1387 1_555 ? ? ? ? ? ? ? 2.393 ? ? metalc16 metalc ? ? A ASP 128 O ? ? ? 1_555 E CA . CA ? ? A ASP 366 A CA 1387 1_555 ? ? ? ? ? ? ? 2.454 ? ? metalc17 metalc ? ? A ASP 128 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 366 A CA 1387 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc18 metalc ? ? B MAN . O3 ? ? ? 1_555 E CA . CA ? ? A MAN 1384 A CA 1387 1_555 ? ? ? ? ? ? ? 2.520 ? ? metalc19 metalc ? ? B MAN . O4 ? ? ? 1_555 E CA . CA ? ? A MAN 1384 A CA 1387 1_555 ? ? ? ? ? ? ? 2.434 ? ? metalc20 metalc ? ? F CA . CA ? ? ? 1_555 K HOH . O ? ? A CA 1388 A HOH 2147 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc21 metalc ? ? G CA . CA ? ? ? 1_555 K HOH . O ? ? A CA 1389 A HOH 2066 1_555 ? ? ? ? ? ? ? 2.374 ? ? metalc22 metalc ? ? G CA . CA ? ? ? 1_555 K HOH . O ? ? A CA 1389 A HOH 2131 1_555 ? ? ? ? ? ? ? 2.411 ? ? metalc23 metalc ? ? G CA . CA ? ? ? 1_555 K HOH . O ? ? A CA 1389 A HOH 2135 1_555 ? ? ? ? ? ? ? 2.353 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 109 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 347 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 110 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 348 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -5.81 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 4 ? AC ? 2 ? AD ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? parallel AA 4 5 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AC 1 2 ? parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? parallel AD 4 5 ? anti-parallel AD 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 23 ? PHE A 25 ? THR A 261 PHE A 263 AA 2 ASN A 28 ? MET A 32 ? ASN A 266 MET A 270 AA 3 PHE A 136 ? SER A 142 ? PHE A 374 SER A 380 AA 4 THR A 76 ? GLN A 85 ? THR A 314 GLN A 323 AA 5 THR A 88 ? TRP A 91 ? THR A 326 TRP A 329 AB 1 THR A 23 ? PHE A 25 ? THR A 261 PHE A 263 AB 2 ASN A 28 ? MET A 32 ? ASN A 266 MET A 270 AB 3 PHE A 136 ? SER A 142 ? PHE A 374 SER A 380 AB 4 GLN A 52 ? LEU A 53 ? GLN A 290 LEU A 291 AC 1 THR A 88 ? TRP A 91 ? THR A 326 TRP A 329 AC 2 THR A 76 ? GLN A 85 ? THR A 314 GLN A 323 AD 1 THR A 23 ? PHE A 25 ? THR A 261 PHE A 263 AD 2 ASN A 28 ? MET A 32 ? ASN A 266 MET A 270 AD 3 PHE A 136 ? SER A 142 ? PHE A 374 SER A 380 AD 4 THR A 76 ? GLN A 85 ? THR A 314 GLN A 323 AD 5 CYS A 118 ? SER A 122 ? CYS A 356 SER A 360 AD 6 GLY A 125 ? ASP A 129 ? GLY A 363 ASP A 367 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 25 ? N PHE A 263 O ASN A 28 ? O ASN A 266 AA 2 3 N PHE A 31 ? N PHE A 269 O CYS A 139 ? O CYS A 377 AA 3 4 N ILE A 138 ? N ILE A 376 O TRP A 77 ? O TRP A 315 AA 4 5 N GLN A 85 ? N GLN A 323 O THR A 88 ? O THR A 326 AB 1 2 N PHE A 25 ? N PHE A 263 O ASN A 28 ? O ASN A 266 AB 2 3 N PHE A 31 ? N PHE A 269 O CYS A 139 ? O CYS A 377 AB 3 4 N LYS A 140 ? N LYS A 378 O GLN A 52 ? O GLN A 290 AC 1 2 N GLN A 90 ? N GLN A 328 O SER A 81 ? O SER A 319 AD 1 2 N PHE A 25 ? N PHE A 263 O ASN A 28 ? O ASN A 266 AD 2 3 N PHE A 31 ? N PHE A 269 O CYS A 139 ? O CYS A 377 AD 3 4 N ILE A 138 ? N ILE A 376 O TRP A 77 ? O TRP A 315 AD 4 5 N MET A 78 ? N MET A 316 O ALA A 119 ? O ALA A 357 AD 5 6 N SER A 122 ? N SER A 360 O GLY A 125 ? O GLY A 363 # _database_PDB_matrix.entry_id 2XR5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2XR5 _atom_sites.fract_transf_matrix[1][1] 0.013996 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013996 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018986 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 239 ? ? ? A . n A 1 2 ALA 2 240 ? ? ? A . n A 1 3 SER 3 241 ? ? ? A . n A 1 4 TRP 4 242 ? ? ? A . n A 1 5 SER 5 243 ? ? ? A . n A 1 6 HIS 6 244 ? ? ? A . n A 1 7 PRO 7 245 ? ? ? A . n A 1 8 GLN 8 246 ? ? ? A . n A 1 9 PHE 9 247 ? ? ? A . n A 1 10 GLU 10 248 ? ? ? A . n A 1 11 LYS 11 249 ? ? ? A . n A 1 12 ILE 12 250 ? ? ? A . n A 1 13 GLU 13 251 ? ? ? A . n A 1 14 GLY 14 252 ? ? ? A . n A 1 15 ARG 15 253 ? ? ? A . n A 1 16 HIS 16 254 254 HIS HIS A . n A 1 17 PRO 17 255 255 PRO PRO A . n A 1 18 CYS 18 256 256 CYS CYS A . n A 1 19 PRO 19 257 257 PRO PRO A . n A 1 20 TRP 20 258 258 TRP TRP A . n A 1 21 GLU 21 259 259 GLU GLU A . n A 1 22 TRP 22 260 260 TRP TRP A . n A 1 23 THR 23 261 261 THR THR A . n A 1 24 PHE 24 262 262 PHE PHE A . n A 1 25 PHE 25 263 263 PHE PHE A . n A 1 26 GLN 26 264 264 GLN GLN A . n A 1 27 GLY 27 265 265 GLY GLY A . n A 1 28 ASN 28 266 266 ASN ASN A . n A 1 29 CYS 29 267 267 CYS CYS A . n A 1 30 TYR 30 268 268 TYR TYR A . n A 1 31 PHE 31 269 269 PHE PHE A . n A 1 32 MET 32 270 270 MET MET A . n A 1 33 SER 33 271 271 SER SER A . n A 1 34 ASN 34 272 272 ASN ASN A . n A 1 35 SER 35 273 273 SER SER A . n A 1 36 GLN 36 274 274 GLN GLN A . n A 1 37 ARG 37 275 275 ARG ARG A . n A 1 38 ASN 38 276 276 ASN ASN A . n A 1 39 TRP 39 277 277 TRP TRP A . n A 1 40 HIS 40 278 278 HIS HIS A . n A 1 41 ASP 41 279 279 ASP ASP A . n A 1 42 SER 42 280 280 SER SER A . n A 1 43 ILE 43 281 281 ILE ILE A . n A 1 44 THR 44 282 282 THR THR A . n A 1 45 ALA 45 283 283 ALA ALA A . n A 1 46 CYS 46 284 284 CYS CYS A . n A 1 47 LYS 47 285 285 LYS LYS A . n A 1 48 GLU 48 286 286 GLU GLU A . n A 1 49 VAL 49 287 287 VAL VAL A . n A 1 50 GLY 50 288 288 GLY GLY A . n A 1 51 ALA 51 289 289 ALA ALA A . n A 1 52 GLN 52 290 290 GLN GLN A . n A 1 53 LEU 53 291 291 LEU LEU A . n A 1 54 VAL 54 292 292 VAL VAL A . n A 1 55 VAL 55 293 293 VAL VAL A . n A 1 56 ILE 56 294 294 ILE ILE A . n A 1 57 LYS 57 295 295 LYS LYS A . n A 1 58 SER 58 296 296 SER SER A . n A 1 59 ALA 59 297 297 ALA ALA A . n A 1 60 GLU 60 298 298 GLU GLU A . n A 1 61 GLU 61 299 299 GLU GLU A . n A 1 62 GLN 62 300 300 GLN GLN A . n A 1 63 ASN 63 301 301 ASN ASN A . n A 1 64 PHE 64 302 302 PHE PHE A . n A 1 65 LEU 65 303 303 LEU LEU A . n A 1 66 GLN 66 304 304 GLN GLN A . n A 1 67 LEU 67 305 305 LEU LEU A . n A 1 68 GLN 68 306 306 GLN GLN A . n A 1 69 SER 69 307 307 SER SER A . n A 1 70 SER 70 308 308 SER SER A . n A 1 71 ARG 71 309 309 ARG ARG A . n A 1 72 SER 72 310 310 SER SER A . n A 1 73 ASN 73 311 311 ASN ASN A . n A 1 74 ARG 74 312 312 ARG ARG A . n A 1 75 PHE 75 313 313 PHE PHE A . n A 1 76 THR 76 314 314 THR THR A . n A 1 77 TRP 77 315 315 TRP TRP A . n A 1 78 MET 78 316 316 MET MET A . n A 1 79 GLY 79 317 317 GLY GLY A . n A 1 80 LEU 80 318 318 LEU LEU A . n A 1 81 SER 81 319 319 SER SER A . n A 1 82 ASP 82 320 320 ASP ASP A . n A 1 83 LEU 83 321 321 LEU LEU A . n A 1 84 ASN 84 322 322 ASN ASN A . n A 1 85 GLN 85 323 323 GLN GLN A . n A 1 86 GLU 86 324 324 GLU GLU A . n A 1 87 GLY 87 325 325 GLY GLY A . n A 1 88 THR 88 326 326 THR THR A . n A 1 89 TRP 89 327 327 TRP TRP A . n A 1 90 GLN 90 328 328 GLN GLN A . n A 1 91 TRP 91 329 329 TRP TRP A . n A 1 92 VAL 92 330 330 VAL VAL A . n A 1 93 ASP 93 331 331 ASP ASP A . n A 1 94 GLY 94 332 332 GLY GLY A . n A 1 95 SER 95 333 333 SER SER A . n A 1 96 PRO 96 334 334 PRO PRO A . n A 1 97 LEU 97 335 335 LEU LEU A . n A 1 98 LEU 98 336 336 LEU LEU A . n A 1 99 PRO 99 337 337 PRO PRO A . n A 1 100 SER 100 338 338 SER SER A . n A 1 101 PHE 101 339 339 PHE PHE A . n A 1 102 LYS 102 340 340 LYS LYS A . n A 1 103 GLN 103 341 341 GLN GLN A . n A 1 104 TYR 104 342 342 TYR TYR A . n A 1 105 TRP 105 343 343 TRP TRP A . n A 1 106 ASN 106 344 344 ASN ASN A . n A 1 107 ARG 107 345 345 ARG ARG A . n A 1 108 GLY 108 346 346 GLY GLY A . n A 1 109 GLU 109 347 347 GLU GLU A . n A 1 110 PRO 110 348 348 PRO PRO A . n A 1 111 ASN 111 349 349 ASN ASN A . n A 1 112 ASN 112 350 350 ASN ASN A . n A 1 113 VAL 113 351 351 VAL VAL A . n A 1 114 GLY 114 352 352 GLY GLY A . n A 1 115 GLU 115 353 353 GLU GLU A . n A 1 116 GLU 116 354 354 GLU GLU A . n A 1 117 ASP 117 355 355 ASP ASP A . n A 1 118 CYS 118 356 356 CYS CYS A . n A 1 119 ALA 119 357 357 ALA ALA A . n A 1 120 GLU 120 358 358 GLU GLU A . n A 1 121 PHE 121 359 359 PHE PHE A . n A 1 122 SER 122 360 360 SER SER A . n A 1 123 GLY 123 361 361 GLY GLY A . n A 1 124 ASN 124 362 362 ASN ASN A . n A 1 125 GLY 125 363 363 GLY GLY A . n A 1 126 TRP 126 364 364 TRP TRP A . n A 1 127 ASN 127 365 365 ASN ASN A . n A 1 128 ASP 128 366 366 ASP ASP A . n A 1 129 ASP 129 367 367 ASP ASP A . n A 1 130 LYS 130 368 368 LYS LYS A . n A 1 131 CYS 131 369 369 CYS CYS A . n A 1 132 ASN 132 370 370 ASN ASN A . n A 1 133 LEU 133 371 371 LEU LEU A . n A 1 134 ALA 134 372 372 ALA ALA A . n A 1 135 LYS 135 373 373 LYS LYS A . n A 1 136 PHE 136 374 374 PHE PHE A . n A 1 137 TRP 137 375 375 TRP TRP A . n A 1 138 ILE 138 376 376 ILE ILE A . n A 1 139 CYS 139 377 377 CYS CYS A . n A 1 140 LYS 140 378 378 LYS LYS A . n A 1 141 LYS 141 379 379 LYS LYS A . n A 1 142 SER 142 380 380 SER SER A . n A 1 143 ALA 143 381 381 ALA ALA A . n A 1 144 ALA 144 382 382 ALA ALA A . n A 1 145 SER 145 383 383 SER SER A . n A 1 146 CYS 146 384 384 CYS CYS A . n A 1 147 SER 147 385 ? ? ? A . n A 1 148 ARG 148 386 ? ? ? A . n A 1 149 ASP 149 387 ? ? ? A . n A 1 150 GLU 150 388 ? ? ? A . n A 1 151 GLU 151 389 ? ? ? A . n A 1 152 GLN 152 390 ? ? ? A . n A 1 153 PHE 153 391 ? ? ? A . n A 1 154 LEU 154 392 ? ? ? A . n A 1 155 SER 155 393 ? ? ? A . n A 1 156 PRO 156 394 ? ? ? A . n A 1 157 ALA 157 395 ? ? ? A . n A 1 158 PRO 158 396 ? ? ? A . n A 1 159 ALA 159 397 ? ? ? A . n A 1 160 THR 160 398 ? ? ? A . n A 1 161 PRO 161 399 ? ? ? A . n A 1 162 ASN 162 400 ? ? ? A . n A 1 163 PRO 163 401 ? ? ? A . n A 1 164 PRO 164 402 ? ? ? A . n A 1 165 PRO 165 403 ? ? ? A . n A 1 166 ALA 166 404 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MAN 1 1384 1384 MAN MAN A . C 3 07B 1 1385 1385 07B 07B A . D 4 ETA 1 1386 1386 ETA ETA A . E 5 CA 1 1387 1387 CA CA A . F 5 CA 1 1388 1388 CA CA A . G 5 CA 1 1389 1389 CA CA A . H 6 CL 1 1390 1390 CL CL A . I 6 CL 1 1391 1391 CL CL A . J 6 CL 1 1392 1392 CL CL A . K 7 HOH 1 2001 2001 HOH HOH A . K 7 HOH 2 2002 2002 HOH HOH A . K 7 HOH 3 2003 2003 HOH HOH A . K 7 HOH 4 2004 2004 HOH HOH A . K 7 HOH 5 2005 2005 HOH HOH A . K 7 HOH 6 2006 2006 HOH HOH A . K 7 HOH 7 2007 2007 HOH HOH A . K 7 HOH 8 2008 2008 HOH HOH A . K 7 HOH 9 2009 2009 HOH HOH A . K 7 HOH 10 2010 2010 HOH HOH A . K 7 HOH 11 2011 2011 HOH HOH A . K 7 HOH 12 2012 2012 HOH HOH A . K 7 HOH 13 2013 2013 HOH HOH A . K 7 HOH 14 2014 2014 HOH HOH A . K 7 HOH 15 2015 2015 HOH HOH A . K 7 HOH 16 2016 2016 HOH HOH A . K 7 HOH 17 2017 2017 HOH HOH A . K 7 HOH 18 2018 2018 HOH HOH A . K 7 HOH 19 2019 2019 HOH HOH A . K 7 HOH 20 2020 2020 HOH HOH A . K 7 HOH 21 2021 2021 HOH HOH A . K 7 HOH 22 2022 2022 HOH HOH A . K 7 HOH 23 2023 2023 HOH HOH A . K 7 HOH 24 2024 2024 HOH HOH A . K 7 HOH 25 2025 2025 HOH HOH A . K 7 HOH 26 2026 2026 HOH HOH A . K 7 HOH 27 2027 2027 HOH HOH A . K 7 HOH 28 2028 2028 HOH HOH A . K 7 HOH 29 2029 2029 HOH HOH A . K 7 HOH 30 2030 2030 HOH HOH A . K 7 HOH 31 2031 2031 HOH HOH A . K 7 HOH 32 2032 2032 HOH HOH A . K 7 HOH 33 2033 2033 HOH HOH A . K 7 HOH 34 2034 2034 HOH HOH A . K 7 HOH 35 2035 2035 HOH HOH A . K 7 HOH 36 2036 2036 HOH HOH A . K 7 HOH 37 2037 2037 HOH HOH A . K 7 HOH 38 2038 2038 HOH HOH A . K 7 HOH 39 2039 2039 HOH HOH A . K 7 HOH 40 2040 2040 HOH HOH A . K 7 HOH 41 2041 2041 HOH HOH A . K 7 HOH 42 2042 2042 HOH HOH A . K 7 HOH 43 2043 2043 HOH HOH A . K 7 HOH 44 2044 2044 HOH HOH A . K 7 HOH 45 2045 2045 HOH HOH A . K 7 HOH 46 2046 2046 HOH HOH A . K 7 HOH 47 2047 2047 HOH HOH A . K 7 HOH 48 2048 2048 HOH HOH A . K 7 HOH 49 2049 2049 HOH HOH A . K 7 HOH 50 2050 2050 HOH HOH A . K 7 HOH 51 2051 2051 HOH HOH A . K 7 HOH 52 2052 2052 HOH HOH A . K 7 HOH 53 2053 2053 HOH HOH A . K 7 HOH 54 2054 2054 HOH HOH A . K 7 HOH 55 2055 2055 HOH HOH A . K 7 HOH 56 2056 2056 HOH HOH A . K 7 HOH 57 2057 2057 HOH HOH A . K 7 HOH 58 2058 2058 HOH HOH A . K 7 HOH 59 2059 2059 HOH HOH A . K 7 HOH 60 2060 2060 HOH HOH A . K 7 HOH 61 2061 2061 HOH HOH A . K 7 HOH 62 2062 2062 HOH HOH A . K 7 HOH 63 2063 2063 HOH HOH A . K 7 HOH 64 2064 2064 HOH HOH A . K 7 HOH 65 2065 2065 HOH HOH A . K 7 HOH 66 2066 2066 HOH HOH A . K 7 HOH 67 2067 2067 HOH HOH A . K 7 HOH 68 2068 2068 HOH HOH A . K 7 HOH 69 2069 2069 HOH HOH A . K 7 HOH 70 2070 2070 HOH HOH A . K 7 HOH 71 2071 2071 HOH HOH A . K 7 HOH 72 2072 2072 HOH HOH A . K 7 HOH 73 2073 2073 HOH HOH A . K 7 HOH 74 2074 2074 HOH HOH A . K 7 HOH 75 2075 2075 HOH HOH A . K 7 HOH 76 2076 2076 HOH HOH A . K 7 HOH 77 2077 2077 HOH HOH A . K 7 HOH 78 2078 2078 HOH HOH A . K 7 HOH 79 2079 2079 HOH HOH A . K 7 HOH 80 2080 2080 HOH HOH A . K 7 HOH 81 2081 2081 HOH HOH A . K 7 HOH 82 2082 2082 HOH HOH A . K 7 HOH 83 2083 2083 HOH HOH A . K 7 HOH 84 2084 2084 HOH HOH A . K 7 HOH 85 2085 2085 HOH HOH A . K 7 HOH 86 2086 2086 HOH HOH A . K 7 HOH 87 2087 2087 HOH HOH A . K 7 HOH 88 2088 2088 HOH HOH A . K 7 HOH 89 2089 2089 HOH HOH A . K 7 HOH 90 2090 2090 HOH HOH A . K 7 HOH 91 2091 2091 HOH HOH A . K 7 HOH 92 2092 2092 HOH HOH A . K 7 HOH 93 2093 2093 HOH HOH A . K 7 HOH 94 2094 2094 HOH HOH A . K 7 HOH 95 2095 2095 HOH HOH A . K 7 HOH 96 2096 2096 HOH HOH A . K 7 HOH 97 2097 2097 HOH HOH A . K 7 HOH 98 2098 2098 HOH HOH A . K 7 HOH 99 2099 2099 HOH HOH A . K 7 HOH 100 2100 2100 HOH HOH A . K 7 HOH 101 2101 2101 HOH HOH A . K 7 HOH 102 2102 2102 HOH HOH A . K 7 HOH 103 2103 2103 HOH HOH A . K 7 HOH 104 2104 2104 HOH HOH A . K 7 HOH 105 2105 2105 HOH HOH A . K 7 HOH 106 2106 2106 HOH HOH A . K 7 HOH 107 2107 2107 HOH HOH A . K 7 HOH 108 2108 2108 HOH HOH A . K 7 HOH 109 2109 2109 HOH HOH A . K 7 HOH 110 2110 2110 HOH HOH A . K 7 HOH 111 2111 2111 HOH HOH A . K 7 HOH 112 2112 2112 HOH HOH A . K 7 HOH 113 2113 2113 HOH HOH A . K 7 HOH 114 2114 2114 HOH HOH A . K 7 HOH 115 2115 2115 HOH HOH A . K 7 HOH 116 2116 2116 HOH HOH A . K 7 HOH 117 2117 2117 HOH HOH A . K 7 HOH 118 2118 2118 HOH HOH A . K 7 HOH 119 2119 2119 HOH HOH A . K 7 HOH 120 2120 2120 HOH HOH A . K 7 HOH 121 2121 2121 HOH HOH A . K 7 HOH 122 2122 2122 HOH HOH A . K 7 HOH 123 2123 2123 HOH HOH A . K 7 HOH 124 2124 2124 HOH HOH A . K 7 HOH 125 2125 2125 HOH HOH A . K 7 HOH 126 2126 2126 HOH HOH A . K 7 HOH 127 2127 2127 HOH HOH A . K 7 HOH 128 2128 2128 HOH HOH A . K 7 HOH 129 2129 2129 HOH HOH A . K 7 HOH 130 2130 2130 HOH HOH A . K 7 HOH 131 2131 2131 HOH HOH A . K 7 HOH 132 2133 2133 HOH HOH A . K 7 HOH 133 2134 2134 HOH HOH A . K 7 HOH 134 2135 2135 HOH HOH A . K 7 HOH 135 2136 2136 HOH HOH A . K 7 HOH 136 2137 2137 HOH HOH A . K 7 HOH 137 2138 2138 HOH HOH A . K 7 HOH 138 2139 2139 HOH HOH A . K 7 HOH 139 2140 2140 HOH HOH A . K 7 HOH 140 2141 2141 HOH HOH A . K 7 HOH 141 2142 2142 HOH HOH A . K 7 HOH 142 2143 2143 HOH HOH A . K 7 HOH 143 2144 2144 HOH HOH A . K 7 HOH 144 2145 2145 HOH HOH A . K 7 HOH 145 2146 2146 HOH HOH A . K 7 HOH 146 2147 2147 HOH HOH A . K 7 HOH 147 2148 2148 HOH HOH A . K 7 HOH 148 2149 2149 HOH HOH A . K 7 HOH 149 2150 2150 HOH HOH A . K 7 HOH 150 2151 2151 HOH HOH A . K 7 HOH 151 2152 2152 HOH HOH A . K 7 HOH 152 2153 2153 HOH HOH A . K 7 HOH 153 2154 2154 HOH HOH A . K 7 HOH 154 2155 2155 HOH HOH A . K 7 HOH 155 2156 2156 HOH HOH A . K 7 HOH 156 2157 2157 HOH HOH A . K 7 HOH 157 2158 2158 HOH HOH A . K 7 HOH 158 2159 2159 HOH HOH A . K 7 HOH 159 2160 2160 HOH HOH A . K 7 HOH 160 2161 2161 HOH HOH A . K 7 HOH 161 2162 2162 HOH HOH A . K 7 HOH 162 2163 2163 HOH HOH A . K 7 HOH 163 2164 2164 HOH HOH A . K 7 HOH 164 2165 2165 HOH HOH A . K 7 HOH 165 2166 2166 HOH HOH A . K 7 HOH 166 2167 2167 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2009 ? K HOH . 2 1 A HOH 2070 ? K HOH . 3 1 A HOH 2133 ? K HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASP 82 ? A ASP 320 ? 1_555 49.7 ? 2 OD2 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 82.4 ? 3 OD1 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 100.1 ? 4 OD2 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OE2 ? A GLU 86 ? A GLU 324 ? 1_555 71.8 ? 5 OD1 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OE2 ? A GLU 86 ? A GLU 324 ? 1_555 119.6 ? 6 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OE2 ? A GLU 86 ? A GLU 324 ? 1_555 53.0 ? 7 OD2 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASN 112 ? A ASN 350 ? 1_555 147.5 ? 8 OD1 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASN 112 ? A ASN 350 ? 1_555 162.1 ? 9 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASN 112 ? A ASN 350 ? 1_555 82.1 ? 10 OE2 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASN 112 ? A ASN 350 ? 1_555 76.0 ? 11 OD2 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? A GLU 116 ? A GLU 354 ? 1_555 127.3 ? 12 OD1 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? A GLU 116 ? A GLU 354 ? 1_555 90.5 ? 13 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? A GLU 116 ? A GLU 354 ? 1_555 145.7 ? 14 OE2 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? A GLU 116 ? A GLU 354 ? 1_555 144.2 ? 15 OD1 ? A ASN 112 ? A ASN 350 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? A GLU 116 ? A GLU 354 ? 1_555 78.5 ? 16 OD2 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 115.4 ? 17 OD1 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 76.2 ? 18 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 74.3 ? 19 OE2 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 126.1 ? 20 OD1 ? A ASN 112 ? A ASN 350 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 87.4 ? 21 O ? A GLU 116 ? A GLU 354 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 76.8 ? 22 OD2 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? K HOH . ? A HOH 2147 ? 1_555 84.2 ? 23 OD1 ? A ASP 82 ? A ASP 320 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? K HOH . ? A HOH 2147 ? 1_555 106.4 ? 24 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? K HOH . ? A HOH 2147 ? 1_555 130.9 ? 25 OE2 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? K HOH . ? A HOH 2147 ? 1_555 77.9 ? 26 OD1 ? A ASN 112 ? A ASN 350 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? K HOH . ? A HOH 2147 ? 1_555 84.7 ? 27 O ? A GLU 116 ? A GLU 354 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? K HOH . ? A HOH 2147 ? 1_555 75.1 ? 28 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 CA ? F CA . ? A CA 1388 ? 1_555 O ? K HOH . ? A HOH 2147 ? 1_555 151.8 ? 29 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 OE1 ? A GLU 115 ? A GLU 353 ? 1_555 90.5 ? 30 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 71.0 ? 31 OE1 ? A GLU 115 ? A GLU 353 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 95.0 ? 32 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 OD2 ? A ASP 117 ? A ASP 355 ? 1_555 116.6 ? 33 OE1 ? A GLU 115 ? A GLU 353 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 OD2 ? A ASP 117 ? A ASP 355 ? 1_555 114.5 ? 34 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 OD2 ? A ASP 117 ? A ASP 355 ? 1_555 50.7 ? 35 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2066 ? 1_555 87.5 ? 36 OE1 ? A GLU 115 ? A GLU 353 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2066 ? 1_555 164.6 ? 37 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2066 ? 1_555 98.8 ? 38 OD2 ? A ASP 117 ? A ASP 355 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2066 ? 1_555 79.8 ? 39 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2131 ? 1_555 89.7 ? 40 OE1 ? A GLU 115 ? A GLU 353 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2131 ? 1_555 79.5 ? 41 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2131 ? 1_555 160.0 ? 42 OD2 ? A ASP 117 ? A ASP 355 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2131 ? 1_555 148.8 ? 43 O ? K HOH . ? A HOH 2066 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2131 ? 1_555 85.3 ? 44 OE1 ? A GLU 86 ? A GLU 324 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2135 ? 1_555 167.3 ? 45 OE1 ? A GLU 115 ? A GLU 353 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2135 ? 1_555 84.8 ? 46 OD1 ? A ASP 117 ? A ASP 355 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2135 ? 1_555 121.1 ? 47 OD2 ? A ASP 117 ? A ASP 355 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2135 ? 1_555 76.0 ? 48 O ? K HOH . ? A HOH 2066 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2135 ? 1_555 93.9 ? 49 O ? K HOH . ? A HOH 2131 ? 1_555 CA ? G CA . ? A CA 1389 ? 1_555 O ? K HOH . ? A HOH 2135 ? 1_555 77.9 ? 50 OE1 ? A GLU 109 ? A GLU 347 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASN 111 ? A ASN 349 ? 1_555 72.9 ? 51 OE1 ? A GLU 109 ? A GLU 347 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OE1 ? A GLU 116 ? A GLU 354 ? 1_555 144.1 ? 52 OD1 ? A ASN 111 ? A ASN 349 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OE1 ? A GLU 116 ? A GLU 354 ? 1_555 74.1 ? 53 OE1 ? A GLU 109 ? A GLU 347 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASN 127 ? A ASN 365 ? 1_555 68.8 ? 54 OD1 ? A ASN 111 ? A ASN 349 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASN 127 ? A ASN 365 ? 1_555 140.6 ? 55 OE1 ? A GLU 116 ? A GLU 354 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASN 127 ? A ASN 365 ? 1_555 145.3 ? 56 OE1 ? A GLU 109 ? A GLU 347 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O ? A ASP 128 ? A ASP 366 ? 1_555 128.8 ? 57 OD1 ? A ASN 111 ? A ASN 349 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O ? A ASP 128 ? A ASP 366 ? 1_555 141.8 ? 58 OE1 ? A GLU 116 ? A GLU 354 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O ? A ASP 128 ? A ASP 366 ? 1_555 73.8 ? 59 OD1 ? A ASN 127 ? A ASN 365 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O ? A ASP 128 ? A ASP 366 ? 1_555 73.7 ? 60 OE1 ? A GLU 109 ? A GLU 347 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASP 128 ? A ASP 366 ? 1_555 72.5 ? 61 OD1 ? A ASN 111 ? A ASN 349 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASP 128 ? A ASP 366 ? 1_555 84.2 ? 62 OE1 ? A GLU 116 ? A GLU 354 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASP 128 ? A ASP 366 ? 1_555 90.7 ? 63 OD1 ? A ASN 127 ? A ASN 365 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASP 128 ? A ASP 366 ? 1_555 92.9 ? 64 O ? A ASP 128 ? A ASP 366 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 OD1 ? A ASP 128 ? A ASP 366 ? 1_555 76.0 ? 65 OE1 ? A GLU 109 ? A GLU 347 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O3 ? B MAN . ? A MAN 1384 ? 1_555 133.0 ? 66 OD1 ? A ASN 111 ? A ASN 349 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O3 ? B MAN . ? A MAN 1384 ? 1_555 119.2 ? 67 OE1 ? A GLU 116 ? A GLU 354 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O3 ? B MAN . ? A MAN 1384 ? 1_555 76.5 ? 68 OD1 ? A ASN 127 ? A ASN 365 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O3 ? B MAN . ? A MAN 1384 ? 1_555 82.4 ? 69 O ? A ASP 128 ? A ASP 366 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O3 ? B MAN . ? A MAN 1384 ? 1_555 72.0 ? 70 OD1 ? A ASP 128 ? A ASP 366 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O3 ? B MAN . ? A MAN 1384 ? 1_555 147.7 ? 71 OE1 ? A GLU 109 ? A GLU 347 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O4 ? B MAN . ? A MAN 1384 ? 1_555 73.1 ? 72 OD1 ? A ASN 111 ? A ASN 349 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O4 ? B MAN . ? A MAN 1384 ? 1_555 79.8 ? 73 OE1 ? A GLU 116 ? A GLU 354 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O4 ? B MAN . ? A MAN 1384 ? 1_555 114.1 ? 74 OD1 ? A ASN 127 ? A ASN 365 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O4 ? B MAN . ? A MAN 1384 ? 1_555 80.6 ? 75 O ? A ASP 128 ? A ASP 366 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O4 ? B MAN . ? A MAN 1384 ? 1_555 132.9 ? 76 OD1 ? A ASP 128 ? A ASP 366 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O4 ? B MAN . ? A MAN 1384 ? 1_555 145.0 ? 77 O3 ? B MAN . ? A MAN 1384 ? 1_555 CA ? E CA . ? A CA 1387 ? 1_555 O4 ? B MAN . ? A MAN 1384 ? 1_555 65.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-19 2 'Structure model' 1 1 2013-12-25 3 'Structure model' 1 2 2019-01-30 4 'Structure model' 1 3 2019-03-06 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 2 0 2023-11-15 7 'Structure model' 2 1 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Experimental preparation' 4 3 'Structure model' Other 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Experimental preparation' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' Other 11 5 'Structure model' 'Structure summary' 12 6 'Structure model' 'Atomic model' 13 6 'Structure model' 'Data collection' 14 6 'Structure model' 'Database references' 15 6 'Structure model' 'Derived calculations' 16 6 'Structure model' 'Structure summary' 17 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_proc 3 3 'Structure model' pdbx_database_status 4 4 'Structure model' exptl_crystal_grow 5 4 'Structure model' struct_conn 6 5 'Structure model' chem_comp 7 5 'Structure model' entity 8 5 'Structure model' pdbx_chem_comp_identifier 9 5 'Structure model' pdbx_database_status 10 5 'Structure model' pdbx_entity_nonpoly 11 5 'Structure model' pdbx_struct_conn_angle 12 5 'Structure model' struct_conn 13 5 'Structure model' struct_site 14 5 'Structure model' struct_site_gen 15 6 'Structure model' atom_site 16 6 'Structure model' chem_comp 17 6 'Structure model' chem_comp_atom 18 6 'Structure model' chem_comp_bond 19 6 'Structure model' database_2 20 6 'Structure model' struct_conn 21 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 4 'Structure model' '_exptl_crystal_grow.temp' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_chem_comp.name' 6 5 'Structure model' '_chem_comp.type' 7 5 'Structure model' '_entity.pdbx_description' 8 5 'Structure model' '_pdbx_database_status.status_code_sf' 9 5 'Structure model' '_pdbx_entity_nonpoly.name' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_struct_conn.conn_type_id' 26 5 'Structure model' '_struct_conn.id' 27 5 'Structure model' '_struct_conn.pdbx_dist_value' 28 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 29 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 30 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 32 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 33 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 34 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 35 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 6 'Structure model' '_atom_site.auth_atom_id' 42 6 'Structure model' '_atom_site.label_atom_id' 43 6 'Structure model' '_chem_comp.pdbx_synonyms' 44 6 'Structure model' '_database_2.pdbx_DOI' 45 6 'Structure model' '_database_2.pdbx_database_accession' 46 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2XR5 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE PSEUDO DIMANNOSIDE MIMIC COMPOSED OF RESIDUES A1384-A1386 IS DIMETHYL (1S,2S,4S,5S)-4-(1-ALPHA-D-MANNOPYRANOSYL)-5-(2- AMINO-1-ETHYLOXY)-CYCLOHEXANE-1,2-DICARBOXYLATE ; _pdbx_entry_details.sequence_details ;SEQUENCE NUMBERING CORRESPONDS TO ISOFORM 1 (MDC-SIGN1A TYPE I). THE SIXTEEN RESIDUES INSERTED AT THE N-TERMINUS (MASWSHPQFEKIEGRM) COME FROM THE EXPRESSION PLASMID. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 341 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 A _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2108 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.81 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 259 ? B 86.68 -20.82 2 1 GLU A 353 ? ? 79.14 102.96 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2156 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.97 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 239 ? A MET 1 2 1 Y 1 A ALA 240 ? A ALA 2 3 1 Y 1 A SER 241 ? A SER 3 4 1 Y 1 A TRP 242 ? A TRP 4 5 1 Y 1 A SER 243 ? A SER 5 6 1 Y 1 A HIS 244 ? A HIS 6 7 1 Y 1 A PRO 245 ? A PRO 7 8 1 Y 1 A GLN 246 ? A GLN 8 9 1 Y 1 A PHE 247 ? A PHE 9 10 1 Y 1 A GLU 248 ? A GLU 10 11 1 Y 1 A LYS 249 ? A LYS 11 12 1 Y 1 A ILE 250 ? A ILE 12 13 1 Y 1 A GLU 251 ? A GLU 13 14 1 Y 1 A GLY 252 ? A GLY 14 15 1 Y 1 A ARG 253 ? A ARG 15 16 1 Y 1 A SER 385 ? A SER 147 17 1 Y 1 A ARG 386 ? A ARG 148 18 1 Y 1 A ASP 387 ? A ASP 149 19 1 Y 1 A GLU 388 ? A GLU 150 20 1 Y 1 A GLU 389 ? A GLU 151 21 1 Y 1 A GLN 390 ? A GLN 152 22 1 Y 1 A PHE 391 ? A PHE 153 23 1 Y 1 A LEU 392 ? A LEU 154 24 1 Y 1 A SER 393 ? A SER 155 25 1 Y 1 A PRO 394 ? A PRO 156 26 1 Y 1 A ALA 395 ? A ALA 157 27 1 Y 1 A PRO 396 ? A PRO 158 28 1 Y 1 A ALA 397 ? A ALA 159 29 1 Y 1 A THR 398 ? A THR 160 30 1 Y 1 A PRO 399 ? A PRO 161 31 1 Y 1 A ASN 400 ? A ASN 162 32 1 Y 1 A PRO 401 ? A PRO 163 33 1 Y 1 A PRO 402 ? A PRO 164 34 1 Y 1 A PRO 403 ? A PRO 165 35 1 Y 1 A ALA 404 ? A ALA 166 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 07B CBK C N S 1 07B CAR C N N 2 07B CBO C N S 3 07B CBA C N N 4 07B OAE O N N 5 07B OAT O N N 6 07B CAB C N N 7 07B CBN C N S 8 07B CAZ C N N 9 07B OAD O N N 10 07B OAS O N N 11 07B CAA C N N 12 07B CAQ C N N 13 07B CBJ C N S 14 07B OAV O N N 15 07B OX0 O N N 16 07B HBK H N N 17 07B HAR1 H N N 18 07B HAR2 H N N 19 07B HBJ H N N 20 07B HX0 H N N 21 07B HBO H N N 22 07B HBN H N N 23 07B HAB1 H N N 24 07B HAB2 H N N 25 07B HAB3 H N N 26 07B HAQ1 H N N 27 07B HAQ2 H N N 28 07B HAA1 H N N 29 07B HAA2 H N N 30 07B HAA3 H N N 31 07B HAV H N N 32 ALA N N N N 33 ALA CA C N S 34 ALA C C N N 35 ALA O O N N 36 ALA CB C N N 37 ALA OXT O N N 38 ALA H H N N 39 ALA H2 H N N 40 ALA HA H N N 41 ALA HB1 H N N 42 ALA HB2 H N N 43 ALA HB3 H N N 44 ALA HXT H N N 45 ARG N N N N 46 ARG CA C N S 47 ARG C C N N 48 ARG O O N N 49 ARG CB C N N 50 ARG CG C N N 51 ARG CD C N N 52 ARG NE N N N 53 ARG CZ C N N 54 ARG NH1 N N N 55 ARG NH2 N N N 56 ARG OXT O N N 57 ARG H H N N 58 ARG H2 H N N 59 ARG HA H N N 60 ARG HB2 H N N 61 ARG HB3 H N N 62 ARG HG2 H N N 63 ARG HG3 H N N 64 ARG HD2 H N N 65 ARG HD3 H N N 66 ARG HE H N N 67 ARG HH11 H N N 68 ARG HH12 H N N 69 ARG HH21 H N N 70 ARG HH22 H N N 71 ARG HXT H N N 72 ASN N N N N 73 ASN CA C N S 74 ASN C C N N 75 ASN O O N N 76 ASN CB C N N 77 ASN CG C N N 78 ASN OD1 O N N 79 ASN ND2 N N N 80 ASN OXT O N N 81 ASN H H N N 82 ASN H2 H N N 83 ASN HA H N N 84 ASN HB2 H N N 85 ASN HB3 H N N 86 ASN HD21 H N N 87 ASN HD22 H N N 88 ASN HXT H N N 89 ASP N N N N 90 ASP CA C N S 91 ASP C C N N 92 ASP O O N N 93 ASP CB C N N 94 ASP CG C N N 95 ASP OD1 O N N 96 ASP OD2 O N N 97 ASP OXT O N N 98 ASP H H N N 99 ASP H2 H N N 100 ASP HA H N N 101 ASP HB2 H N N 102 ASP HB3 H N N 103 ASP HD2 H N N 104 ASP HXT H N N 105 CA CA CA N N 106 CL CL CL N N 107 CYS N N N N 108 CYS CA C N R 109 CYS C C N N 110 CYS O O N N 111 CYS CB C N N 112 CYS SG S N N 113 CYS OXT O N N 114 CYS H H N N 115 CYS H2 H N N 116 CYS HA H N N 117 CYS HB2 H N N 118 CYS HB3 H N N 119 CYS HG H N N 120 CYS HXT H N N 121 ETA CA C N N 122 ETA N N N N 123 ETA C C N N 124 ETA O O N N 125 ETA HA1 H N N 126 ETA HA2 H N N 127 ETA H H N N 128 ETA H2 H N N 129 ETA HB1 H N N 130 ETA HB2 H N N 131 ETA HO H N N 132 GLN N N N N 133 GLN CA C N S 134 GLN C C N N 135 GLN O O N N 136 GLN CB C N N 137 GLN CG C N N 138 GLN CD C N N 139 GLN OE1 O N N 140 GLN NE2 N N N 141 GLN OXT O N N 142 GLN H H N N 143 GLN H2 H N N 144 GLN HA H N N 145 GLN HB2 H N N 146 GLN HB3 H N N 147 GLN HG2 H N N 148 GLN HG3 H N N 149 GLN HE21 H N N 150 GLN HE22 H N N 151 GLN HXT H N N 152 GLU N N N N 153 GLU CA C N S 154 GLU C C N N 155 GLU O O N N 156 GLU CB C N N 157 GLU CG C N N 158 GLU CD C N N 159 GLU OE1 O N N 160 GLU OE2 O N N 161 GLU OXT O N N 162 GLU H H N N 163 GLU H2 H N N 164 GLU HA H N N 165 GLU HB2 H N N 166 GLU HB3 H N N 167 GLU HG2 H N N 168 GLU HG3 H N N 169 GLU HE2 H N N 170 GLU HXT H N N 171 GLY N N N N 172 GLY CA C N N 173 GLY C C N N 174 GLY O O N N 175 GLY OXT O N N 176 GLY H H N N 177 GLY H2 H N N 178 GLY HA2 H N N 179 GLY HA3 H N N 180 GLY HXT H N N 181 HIS N N N N 182 HIS CA C N S 183 HIS C C N N 184 HIS O O N N 185 HIS CB C N N 186 HIS CG C Y N 187 HIS ND1 N Y N 188 HIS CD2 C Y N 189 HIS CE1 C Y N 190 HIS NE2 N Y N 191 HIS OXT O N N 192 HIS H H N N 193 HIS H2 H N N 194 HIS HA H N N 195 HIS HB2 H N N 196 HIS HB3 H N N 197 HIS HD1 H N N 198 HIS HD2 H N N 199 HIS HE1 H N N 200 HIS HE2 H N N 201 HIS HXT H N N 202 HOH O O N N 203 HOH H1 H N N 204 HOH H2 H N N 205 ILE N N N N 206 ILE CA C N S 207 ILE C C N N 208 ILE O O N N 209 ILE CB C N S 210 ILE CG1 C N N 211 ILE CG2 C N N 212 ILE CD1 C N N 213 ILE OXT O N N 214 ILE H H N N 215 ILE H2 H N N 216 ILE HA H N N 217 ILE HB H N N 218 ILE HG12 H N N 219 ILE HG13 H N N 220 ILE HG21 H N N 221 ILE HG22 H N N 222 ILE HG23 H N N 223 ILE HD11 H N N 224 ILE HD12 H N N 225 ILE HD13 H N N 226 ILE HXT H N N 227 LEU N N N N 228 LEU CA C N S 229 LEU C C N N 230 LEU O O N N 231 LEU CB C N N 232 LEU CG C N N 233 LEU CD1 C N N 234 LEU CD2 C N N 235 LEU OXT O N N 236 LEU H H N N 237 LEU H2 H N N 238 LEU HA H N N 239 LEU HB2 H N N 240 LEU HB3 H N N 241 LEU HG H N N 242 LEU HD11 H N N 243 LEU HD12 H N N 244 LEU HD13 H N N 245 LEU HD21 H N N 246 LEU HD22 H N N 247 LEU HD23 H N N 248 LEU HXT H N N 249 LYS N N N N 250 LYS CA C N S 251 LYS C C N N 252 LYS O O N N 253 LYS CB C N N 254 LYS CG C N N 255 LYS CD C N N 256 LYS CE C N N 257 LYS NZ N N N 258 LYS OXT O N N 259 LYS H H N N 260 LYS H2 H N N 261 LYS HA H N N 262 LYS HB2 H N N 263 LYS HB3 H N N 264 LYS HG2 H N N 265 LYS HG3 H N N 266 LYS HD2 H N N 267 LYS HD3 H N N 268 LYS HE2 H N N 269 LYS HE3 H N N 270 LYS HZ1 H N N 271 LYS HZ2 H N N 272 LYS HZ3 H N N 273 LYS HXT H N N 274 MAN C1 C N S 275 MAN C2 C N S 276 MAN C3 C N S 277 MAN C4 C N S 278 MAN C5 C N R 279 MAN C6 C N N 280 MAN O1 O N N 281 MAN O2 O N N 282 MAN O3 O N N 283 MAN O4 O N N 284 MAN O5 O N N 285 MAN O6 O N N 286 MAN H1 H N N 287 MAN H2 H N N 288 MAN H3 H N N 289 MAN H4 H N N 290 MAN H5 H N N 291 MAN H61 H N N 292 MAN H62 H N N 293 MAN HO1 H N N 294 MAN HO2 H N N 295 MAN HO3 H N N 296 MAN HO4 H N N 297 MAN HO6 H N N 298 MET N N N N 299 MET CA C N S 300 MET C C N N 301 MET O O N N 302 MET CB C N N 303 MET CG C N N 304 MET SD S N N 305 MET CE C N N 306 MET OXT O N N 307 MET H H N N 308 MET H2 H N N 309 MET HA H N N 310 MET HB2 H N N 311 MET HB3 H N N 312 MET HG2 H N N 313 MET HG3 H N N 314 MET HE1 H N N 315 MET HE2 H N N 316 MET HE3 H N N 317 MET HXT H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 THR N N N N 373 THR CA C N S 374 THR C C N N 375 THR O O N N 376 THR CB C N R 377 THR OG1 O N N 378 THR CG2 C N N 379 THR OXT O N N 380 THR H H N N 381 THR H2 H N N 382 THR HA H N N 383 THR HB H N N 384 THR HG1 H N N 385 THR HG21 H N N 386 THR HG22 H N N 387 THR HG23 H N N 388 THR HXT H N N 389 TRP N N N N 390 TRP CA C N S 391 TRP C C N N 392 TRP O O N N 393 TRP CB C N N 394 TRP CG C Y N 395 TRP CD1 C Y N 396 TRP CD2 C Y N 397 TRP NE1 N Y N 398 TRP CE2 C Y N 399 TRP CE3 C Y N 400 TRP CZ2 C Y N 401 TRP CZ3 C Y N 402 TRP CH2 C Y N 403 TRP OXT O N N 404 TRP H H N N 405 TRP H2 H N N 406 TRP HA H N N 407 TRP HB2 H N N 408 TRP HB3 H N N 409 TRP HD1 H N N 410 TRP HE1 H N N 411 TRP HE3 H N N 412 TRP HZ2 H N N 413 TRP HZ3 H N N 414 TRP HH2 H N N 415 TRP HXT H N N 416 TYR N N N N 417 TYR CA C N S 418 TYR C C N N 419 TYR O O N N 420 TYR CB C N N 421 TYR CG C Y N 422 TYR CD1 C Y N 423 TYR CD2 C Y N 424 TYR CE1 C Y N 425 TYR CE2 C Y N 426 TYR CZ C Y N 427 TYR OH O N N 428 TYR OXT O N N 429 TYR H H N N 430 TYR H2 H N N 431 TYR HA H N N 432 TYR HB2 H N N 433 TYR HB3 H N N 434 TYR HD1 H N N 435 TYR HD2 H N N 436 TYR HE1 H N N 437 TYR HE2 H N N 438 TYR HH H N N 439 TYR HXT H N N 440 VAL N N N N 441 VAL CA C N S 442 VAL C C N N 443 VAL O O N N 444 VAL CB C N N 445 VAL CG1 C N N 446 VAL CG2 C N N 447 VAL OXT O N N 448 VAL H H N N 449 VAL H2 H N N 450 VAL HA H N N 451 VAL HB H N N 452 VAL HG11 H N N 453 VAL HG12 H N N 454 VAL HG13 H N N 455 VAL HG21 H N N 456 VAL HG22 H N N 457 VAL HG23 H N N 458 VAL HXT H N N 459 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 07B CBK CAR sing N N 1 07B CBK CBJ sing N N 2 07B CBK OX0 sing N N 3 07B CAR CBO sing N N 4 07B CBO CBA sing N N 5 07B CBO CBN sing N N 6 07B CBA OAE doub N N 7 07B CBA OAT sing N N 8 07B OAT CAB sing N N 9 07B CBN CAZ sing N N 10 07B CBN CAQ sing N N 11 07B CAZ OAD doub N N 12 07B CAZ OAS sing N N 13 07B OAS CAA sing N N 14 07B CAQ CBJ sing N N 15 07B CBJ OAV sing N N 16 07B CBK HBK sing N N 17 07B CAR HAR1 sing N N 18 07B CAR HAR2 sing N N 19 07B CBJ HBJ sing N N 20 07B OX0 HX0 sing N N 21 07B CBO HBO sing N N 22 07B CBN HBN sing N N 23 07B CAB HAB1 sing N N 24 07B CAB HAB2 sing N N 25 07B CAB HAB3 sing N N 26 07B CAQ HAQ1 sing N N 27 07B CAQ HAQ2 sing N N 28 07B CAA HAA1 sing N N 29 07B CAA HAA2 sing N N 30 07B CAA HAA3 sing N N 31 07B OAV HAV sing N N 32 ALA N CA sing N N 33 ALA N H sing N N 34 ALA N H2 sing N N 35 ALA CA C sing N N 36 ALA CA CB sing N N 37 ALA CA HA sing N N 38 ALA C O doub N N 39 ALA C OXT sing N N 40 ALA CB HB1 sing N N 41 ALA CB HB2 sing N N 42 ALA CB HB3 sing N N 43 ALA OXT HXT sing N N 44 ARG N CA sing N N 45 ARG N H sing N N 46 ARG N H2 sing N N 47 ARG CA C sing N N 48 ARG CA CB sing N N 49 ARG CA HA sing N N 50 ARG C O doub N N 51 ARG C OXT sing N N 52 ARG CB CG sing N N 53 ARG CB HB2 sing N N 54 ARG CB HB3 sing N N 55 ARG CG CD sing N N 56 ARG CG HG2 sing N N 57 ARG CG HG3 sing N N 58 ARG CD NE sing N N 59 ARG CD HD2 sing N N 60 ARG CD HD3 sing N N 61 ARG NE CZ sing N N 62 ARG NE HE sing N N 63 ARG CZ NH1 sing N N 64 ARG CZ NH2 doub N N 65 ARG NH1 HH11 sing N N 66 ARG NH1 HH12 sing N N 67 ARG NH2 HH21 sing N N 68 ARG NH2 HH22 sing N N 69 ARG OXT HXT sing N N 70 ASN N CA sing N N 71 ASN N H sing N N 72 ASN N H2 sing N N 73 ASN CA C sing N N 74 ASN CA CB sing N N 75 ASN CA HA sing N N 76 ASN C O doub N N 77 ASN C OXT sing N N 78 ASN CB CG sing N N 79 ASN CB HB2 sing N N 80 ASN CB HB3 sing N N 81 ASN CG OD1 doub N N 82 ASN CG ND2 sing N N 83 ASN ND2 HD21 sing N N 84 ASN ND2 HD22 sing N N 85 ASN OXT HXT sing N N 86 ASP N CA sing N N 87 ASP N H sing N N 88 ASP N H2 sing N N 89 ASP CA C sing N N 90 ASP CA CB sing N N 91 ASP CA HA sing N N 92 ASP C O doub N N 93 ASP C OXT sing N N 94 ASP CB CG sing N N 95 ASP CB HB2 sing N N 96 ASP CB HB3 sing N N 97 ASP CG OD1 doub N N 98 ASP CG OD2 sing N N 99 ASP OD2 HD2 sing N N 100 ASP OXT HXT sing N N 101 CYS N CA sing N N 102 CYS N H sing N N 103 CYS N H2 sing N N 104 CYS CA C sing N N 105 CYS CA CB sing N N 106 CYS CA HA sing N N 107 CYS C O doub N N 108 CYS C OXT sing N N 109 CYS CB SG sing N N 110 CYS CB HB2 sing N N 111 CYS CB HB3 sing N N 112 CYS SG HG sing N N 113 CYS OXT HXT sing N N 114 ETA CA N sing N N 115 ETA CA C sing N N 116 ETA CA HA1 sing N N 117 ETA CA HA2 sing N N 118 ETA N H sing N N 119 ETA N H2 sing N N 120 ETA C O sing N N 121 ETA C HB1 sing N N 122 ETA C HB2 sing N N 123 ETA O HO sing N N 124 GLN N CA sing N N 125 GLN N H sing N N 126 GLN N H2 sing N N 127 GLN CA C sing N N 128 GLN CA CB sing N N 129 GLN CA HA sing N N 130 GLN C O doub N N 131 GLN C OXT sing N N 132 GLN CB CG sing N N 133 GLN CB HB2 sing N N 134 GLN CB HB3 sing N N 135 GLN CG CD sing N N 136 GLN CG HG2 sing N N 137 GLN CG HG3 sing N N 138 GLN CD OE1 doub N N 139 GLN CD NE2 sing N N 140 GLN NE2 HE21 sing N N 141 GLN NE2 HE22 sing N N 142 GLN OXT HXT sing N N 143 GLU N CA sing N N 144 GLU N H sing N N 145 GLU N H2 sing N N 146 GLU CA C sing N N 147 GLU CA CB sing N N 148 GLU CA HA sing N N 149 GLU C O doub N N 150 GLU C OXT sing N N 151 GLU CB CG sing N N 152 GLU CB HB2 sing N N 153 GLU CB HB3 sing N N 154 GLU CG CD sing N N 155 GLU CG HG2 sing N N 156 GLU CG HG3 sing N N 157 GLU CD OE1 doub N N 158 GLU CD OE2 sing N N 159 GLU OE2 HE2 sing N N 160 GLU OXT HXT sing N N 161 GLY N CA sing N N 162 GLY N H sing N N 163 GLY N H2 sing N N 164 GLY CA C sing N N 165 GLY CA HA2 sing N N 166 GLY CA HA3 sing N N 167 GLY C O doub N N 168 GLY C OXT sing N N 169 GLY OXT HXT sing N N 170 HIS N CA sing N N 171 HIS N H sing N N 172 HIS N H2 sing N N 173 HIS CA C sing N N 174 HIS CA CB sing N N 175 HIS CA HA sing N N 176 HIS C O doub N N 177 HIS C OXT sing N N 178 HIS CB CG sing N N 179 HIS CB HB2 sing N N 180 HIS CB HB3 sing N N 181 HIS CG ND1 sing Y N 182 HIS CG CD2 doub Y N 183 HIS ND1 CE1 doub Y N 184 HIS ND1 HD1 sing N N 185 HIS CD2 NE2 sing Y N 186 HIS CD2 HD2 sing N N 187 HIS CE1 NE2 sing Y N 188 HIS CE1 HE1 sing N N 189 HIS NE2 HE2 sing N N 190 HIS OXT HXT sing N N 191 HOH O H1 sing N N 192 HOH O H2 sing N N 193 ILE N CA sing N N 194 ILE N H sing N N 195 ILE N H2 sing N N 196 ILE CA C sing N N 197 ILE CA CB sing N N 198 ILE CA HA sing N N 199 ILE C O doub N N 200 ILE C OXT sing N N 201 ILE CB CG1 sing N N 202 ILE CB CG2 sing N N 203 ILE CB HB sing N N 204 ILE CG1 CD1 sing N N 205 ILE CG1 HG12 sing N N 206 ILE CG1 HG13 sing N N 207 ILE CG2 HG21 sing N N 208 ILE CG2 HG22 sing N N 209 ILE CG2 HG23 sing N N 210 ILE CD1 HD11 sing N N 211 ILE CD1 HD12 sing N N 212 ILE CD1 HD13 sing N N 213 ILE OXT HXT sing N N 214 LEU N CA sing N N 215 LEU N H sing N N 216 LEU N H2 sing N N 217 LEU CA C sing N N 218 LEU CA CB sing N N 219 LEU CA HA sing N N 220 LEU C O doub N N 221 LEU C OXT sing N N 222 LEU CB CG sing N N 223 LEU CB HB2 sing N N 224 LEU CB HB3 sing N N 225 LEU CG CD1 sing N N 226 LEU CG CD2 sing N N 227 LEU CG HG sing N N 228 LEU CD1 HD11 sing N N 229 LEU CD1 HD12 sing N N 230 LEU CD1 HD13 sing N N 231 LEU CD2 HD21 sing N N 232 LEU CD2 HD22 sing N N 233 LEU CD2 HD23 sing N N 234 LEU OXT HXT sing N N 235 LYS N CA sing N N 236 LYS N H sing N N 237 LYS N H2 sing N N 238 LYS CA C sing N N 239 LYS CA CB sing N N 240 LYS CA HA sing N N 241 LYS C O doub N N 242 LYS C OXT sing N N 243 LYS CB CG sing N N 244 LYS CB HB2 sing N N 245 LYS CB HB3 sing N N 246 LYS CG CD sing N N 247 LYS CG HG2 sing N N 248 LYS CG HG3 sing N N 249 LYS CD CE sing N N 250 LYS CD HD2 sing N N 251 LYS CD HD3 sing N N 252 LYS CE NZ sing N N 253 LYS CE HE2 sing N N 254 LYS CE HE3 sing N N 255 LYS NZ HZ1 sing N N 256 LYS NZ HZ2 sing N N 257 LYS NZ HZ3 sing N N 258 LYS OXT HXT sing N N 259 MAN C1 C2 sing N N 260 MAN C1 O1 sing N N 261 MAN C1 O5 sing N N 262 MAN C1 H1 sing N N 263 MAN C2 C3 sing N N 264 MAN C2 O2 sing N N 265 MAN C2 H2 sing N N 266 MAN C3 C4 sing N N 267 MAN C3 O3 sing N N 268 MAN C3 H3 sing N N 269 MAN C4 C5 sing N N 270 MAN C4 O4 sing N N 271 MAN C4 H4 sing N N 272 MAN C5 C6 sing N N 273 MAN C5 O5 sing N N 274 MAN C5 H5 sing N N 275 MAN C6 O6 sing N N 276 MAN C6 H61 sing N N 277 MAN C6 H62 sing N N 278 MAN O1 HO1 sing N N 279 MAN O2 HO2 sing N N 280 MAN O3 HO3 sing N N 281 MAN O4 HO4 sing N N 282 MAN O6 HO6 sing N N 283 MET N CA sing N N 284 MET N H sing N N 285 MET N H2 sing N N 286 MET CA C sing N N 287 MET CA CB sing N N 288 MET CA HA sing N N 289 MET C O doub N N 290 MET C OXT sing N N 291 MET CB CG sing N N 292 MET CB HB2 sing N N 293 MET CB HB3 sing N N 294 MET CG SD sing N N 295 MET CG HG2 sing N N 296 MET CG HG3 sing N N 297 MET SD CE sing N N 298 MET CE HE1 sing N N 299 MET CE HE2 sing N N 300 MET CE HE3 sing N N 301 MET OXT HXT sing N N 302 PHE N CA sing N N 303 PHE N H sing N N 304 PHE N H2 sing N N 305 PHE CA C sing N N 306 PHE CA CB sing N N 307 PHE CA HA sing N N 308 PHE C O doub N N 309 PHE C OXT sing N N 310 PHE CB CG sing N N 311 PHE CB HB2 sing N N 312 PHE CB HB3 sing N N 313 PHE CG CD1 doub Y N 314 PHE CG CD2 sing Y N 315 PHE CD1 CE1 sing Y N 316 PHE CD1 HD1 sing N N 317 PHE CD2 CE2 doub Y N 318 PHE CD2 HD2 sing N N 319 PHE CE1 CZ doub Y N 320 PHE CE1 HE1 sing N N 321 PHE CE2 CZ sing Y N 322 PHE CE2 HE2 sing N N 323 PHE CZ HZ sing N N 324 PHE OXT HXT sing N N 325 PRO N CA sing N N 326 PRO N CD sing N N 327 PRO N H sing N N 328 PRO CA C sing N N 329 PRO CA CB sing N N 330 PRO CA HA sing N N 331 PRO C O doub N N 332 PRO C OXT sing N N 333 PRO CB CG sing N N 334 PRO CB HB2 sing N N 335 PRO CB HB3 sing N N 336 PRO CG CD sing N N 337 PRO CG HG2 sing N N 338 PRO CG HG3 sing N N 339 PRO CD HD2 sing N N 340 PRO CD HD3 sing N N 341 PRO OXT HXT sing N N 342 SER N CA sing N N 343 SER N H sing N N 344 SER N H2 sing N N 345 SER CA C sing N N 346 SER CA CB sing N N 347 SER CA HA sing N N 348 SER C O doub N N 349 SER C OXT sing N N 350 SER CB OG sing N N 351 SER CB HB2 sing N N 352 SER CB HB3 sing N N 353 SER OG HG sing N N 354 SER OXT HXT sing N N 355 THR N CA sing N N 356 THR N H sing N N 357 THR N H2 sing N N 358 THR CA C sing N N 359 THR CA CB sing N N 360 THR CA HA sing N N 361 THR C O doub N N 362 THR C OXT sing N N 363 THR CB OG1 sing N N 364 THR CB CG2 sing N N 365 THR CB HB sing N N 366 THR OG1 HG1 sing N N 367 THR CG2 HG21 sing N N 368 THR CG2 HG22 sing N N 369 THR CG2 HG23 sing N N 370 THR OXT HXT sing N N 371 TRP N CA sing N N 372 TRP N H sing N N 373 TRP N H2 sing N N 374 TRP CA C sing N N 375 TRP CA CB sing N N 376 TRP CA HA sing N N 377 TRP C O doub N N 378 TRP C OXT sing N N 379 TRP CB CG sing N N 380 TRP CB HB2 sing N N 381 TRP CB HB3 sing N N 382 TRP CG CD1 doub Y N 383 TRP CG CD2 sing Y N 384 TRP CD1 NE1 sing Y N 385 TRP CD1 HD1 sing N N 386 TRP CD2 CE2 doub Y N 387 TRP CD2 CE3 sing Y N 388 TRP NE1 CE2 sing Y N 389 TRP NE1 HE1 sing N N 390 TRP CE2 CZ2 sing Y N 391 TRP CE3 CZ3 doub Y N 392 TRP CE3 HE3 sing N N 393 TRP CZ2 CH2 doub Y N 394 TRP CZ2 HZ2 sing N N 395 TRP CZ3 CH2 sing Y N 396 TRP CZ3 HZ3 sing N N 397 TRP CH2 HH2 sing N N 398 TRP OXT HXT sing N N 399 TYR N CA sing N N 400 TYR N H sing N N 401 TYR N H2 sing N N 402 TYR CA C sing N N 403 TYR CA CB sing N N 404 TYR CA HA sing N N 405 TYR C O doub N N 406 TYR C OXT sing N N 407 TYR CB CG sing N N 408 TYR CB HB2 sing N N 409 TYR CB HB3 sing N N 410 TYR CG CD1 doub Y N 411 TYR CG CD2 sing Y N 412 TYR CD1 CE1 sing Y N 413 TYR CD1 HD1 sing N N 414 TYR CD2 CE2 doub Y N 415 TYR CD2 HD2 sing N N 416 TYR CE1 CZ doub Y N 417 TYR CE1 HE1 sing N N 418 TYR CE2 CZ sing Y N 419 TYR CE2 HE2 sing N N 420 TYR CZ OH sing N N 421 TYR OH HH sing N N 422 TYR OXT HXT sing N N 423 VAL N CA sing N N 424 VAL N H sing N N 425 VAL N H2 sing N N 426 VAL CA C sing N N 427 VAL CA CB sing N N 428 VAL CA HA sing N N 429 VAL C O doub N N 430 VAL C OXT sing N N 431 VAL CB CG1 sing N N 432 VAL CB CG2 sing N N 433 VAL CB HB sing N N 434 VAL CG1 HG11 sing N N 435 VAL CG1 HG12 sing N N 436 VAL CG1 HG13 sing N N 437 VAL CG2 HG21 sing N N 438 VAL CG2 HG22 sing N N 439 VAL CG2 HG23 sing N N 440 VAL OXT HXT sing N N 441 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 alpha-D-mannopyranose MAN 3 'dimethyl (1S,2S,4S,5S)-4,5-dihydroxycyclohexane-1,2-dicarboxylate' 07B 4 ETHANOLAMINE ETA 5 'CALCIUM ION' CA 6 'CHLORIDE ION' CL 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2IT6 _pdbx_initial_refinement_model.details 'PDB ENTRY 2IT6' #