HEADER DNA BINDING PROTEIN 03-NOV-10 2XWC TITLE CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TP73 REFINED AT TITLE 2 1.8 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOUR PROTEIN P73; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DNA-BINDING DOMAIN, RESIDUES 112-311; COMPND 5 SYNONYM: P53-LIKE TRANSCRIPTION FACTOR, P53-RELATED PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-CTHF KEYWDS DNA-BINDING PROTEIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.CANNING,Y.ZHANG,M.VOLLMAR,T.KROJER,E.UGOCHUKWU,J.R.C.MUNIZ,F.VON AUTHOR 2 DELFT,J.WEIGELT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,A.N.BULLOCK REVDAT 4 24-JAN-18 2XWC 1 JRNL REVDAT 3 03-APR-13 2XWC 1 JRNL REVDAT 2 26-SEP-12 2XWC 1 COMPND AUTHOR JRNL REMARK REVDAT 2 2 1 VERSN HETSYN REVDAT 1 17-NOV-10 2XWC 0 SPRSDE 17-NOV-10 2XWC 2XIP JRNL AUTH P.CANNING,F.VON DELFT,A.N.BULLOCK JRNL TITL STRUCTURAL BASIS FOR ASPP2 RECOGNITION BY THE TUMOR JRNL TITL 2 SUPPRESSOR P73. JRNL REF J.MOL.BIOL. V. 423 515 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22917970 JRNL DOI 10.1016/J.JMB.2012.08.005 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 20040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1081 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1447 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3480 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1579 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 175 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.130 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.081 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.788 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1647 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1138 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2241 ; 1.542 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2770 ; 1.382 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 202 ; 6.443 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 74 ;35.186 ;23.108 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 255 ;13.557 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;18.606 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 245 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1818 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 327 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1029 ; 1.705 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 400 ; 0.558 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1678 ; 2.758 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 618 ; 3.912 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 563 ; 5.786 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 112 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0230 -18.7070 -1.1940 REMARK 3 T TENSOR REMARK 3 T11: 0.0963 T22: 0.1479 REMARK 3 T33: 0.1280 T12: -0.0080 REMARK 3 T13: -0.0179 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 4.5043 L22: 1.0933 REMARK 3 L33: 0.4079 L12: -0.9166 REMARK 3 L13: -0.5706 L23: 0.1594 REMARK 3 S TENSOR REMARK 3 S11: -0.1002 S12: 0.1333 S13: 0.1710 REMARK 3 S21: -0.0006 S22: 0.0292 S23: 0.0465 REMARK 3 S31: -0.0781 S32: -0.0126 S33: 0.0709 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 142 A 262 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9140 -21.0050 8.7180 REMARK 3 T TENSOR REMARK 3 T11: 0.0403 T22: 0.0780 REMARK 3 T33: 0.0782 T12: -0.0098 REMARK 3 T13: -0.0001 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.9355 L22: 0.8262 REMARK 3 L33: 1.2135 L12: 0.0848 REMARK 3 L13: 0.1524 L23: -0.0698 REMARK 3 S TENSOR REMARK 3 S11: -0.0319 S12: 0.0089 S13: 0.0119 REMARK 3 S21: 0.0788 S22: 0.0156 S23: 0.0364 REMARK 3 S31: -0.0826 S32: 0.0591 S33: 0.0163 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 263 A 292 REMARK 3 ORIGIN FOR THE GROUP (A): 24.1370 -24.1680 2.7870 REMARK 3 T TENSOR REMARK 3 T11: 0.0233 T22: 0.1131 REMARK 3 T33: 0.0935 T12: -0.0130 REMARK 3 T13: 0.0067 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 3.5234 L22: 2.5011 REMARK 3 L33: 2.2330 L12: 1.5174 REMARK 3 L13: 0.8549 L23: 0.9330 REMARK 3 S TENSOR REMARK 3 S11: 0.0460 S12: -0.0904 S13: -0.1692 REMARK 3 S21: 0.0321 S22: -0.0966 S23: -0.0491 REMARK 3 S31: -0.0957 S32: -0.0234 S33: 0.0506 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 293 A 318 REMARK 3 ORIGIN FOR THE GROUP (A): 29.1530 0.4730 5.1650 REMARK 3 T TENSOR REMARK 3 T11: 0.2915 T22: 0.2652 REMARK 3 T33: 0.2398 T12: -0.1155 REMARK 3 T13: -0.0503 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 6.2751 L22: 2.5560 REMARK 3 L33: 0.2884 L12: 3.7240 REMARK 3 L13: -1.1254 L23: -0.8298 REMARK 3 S TENSOR REMARK 3 S11: -0.1759 S12: 0.3945 S13: 0.3063 REMARK 3 S21: -0.1191 S22: 0.2205 S23: 0.3024 REMARK 3 S31: 0.0130 S32: -0.0413 S33: -0.0447 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. INITIATOR MET COULD NOT BE RESOLVED OWING TO DISORDER. REMARK 4 REMARK 4 2XWC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1290045961. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 280763 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 49.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 49.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.90 REMARK 200 R MERGE FOR SHELL (I) : 1.24000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 20CJ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2M SODIUM POTASSIUM TARTRATE, 0.25% REMARK 280 PEG MME 5000, 0.1M TRIS PH 9 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.18500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.18500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.18500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.18500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.18500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.18500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 55.18500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 55.18500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 55.18500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 55.18500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 55.18500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 55.18500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 55.18500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 55.18500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 55.18500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 55.18500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 55.18500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 55.18500 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 27.59250 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 82.77750 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 82.77750 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 27.59250 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 27.59250 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 27.59250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 82.77750 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 82.77750 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 27.59250 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 82.77750 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 27.59250 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 82.77750 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 27.59250 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 82.77750 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 82.77750 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 82.77750 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 27.59250 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 82.77750 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 27.59250 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 27.59250 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 27.59250 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 82.77750 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 82.77750 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 27.59250 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 27.59250 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 82.77750 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 82.77750 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 82.77750 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 82.77750 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 27.59250 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 82.77750 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 27.59250 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 82.77750 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 27.59250 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 27.59250 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 27.59250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 27.59250 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 27.59250 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 27.59250 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, PRO 111 TO MET REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 111 REMARK 465 GLY A 265 REMARK 465 MET A 266 REMARK 465 ASN A 267 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 133 CG CD OE1 NE2 REMARK 470 THR A 136 OG1 CG2 REMARK 470 LYS A 138 CG CD CE NZ REMARK 470 GLN A 207 CG CD OE1 NE2 REMARK 470 ARG A 268 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 303 CG CD CE NZ REMARK 470 GLN A 318 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 178 CG - SD - CE ANGL. DEV. = 11.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 245 117.45 -36.81 REMARK 500 CYS A 297 58.20 -148.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 IDENTITY OF 2 ZN IONS CONFIRMED BY MAD EXPERIMENT. REMARK 600 PEAKS IDENTIFIED AT ZN BINDING SITES IN ANOMALOUS MAPS COLLECTED REMARK 600 AT ZN ABSORPTION EDGE. PEAKS ARE NOT PRESENT IN MAPS COLLECTED REMARK 600 BELOW ZN ABSORPTION EDGE. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1319 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 258 SG REMARK 620 2 CYS A 262 SG 114.8 REMARK 620 3 CYS A 194 SG 111.9 112.6 REMARK 620 4 HIS A 197 ND1 108.5 102.2 105.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1320 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD1 REMARK 620 2 CYS A 297 SG 111.4 REMARK 620 3 HIS A 308 NE2 99.4 101.4 REMARK 620 4 CYS A 295 SG 105.4 119.0 118.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TAM A 1321 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1322 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DXS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE C-TERMINAL STERILE ALPHA MOTIF (SAM) REMARK 900 DOMAIN OF HUMAN P73 ALPHA REMARK 900 RELATED ID: 2WQJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A TRUNCATED VARIANT OF THE HUMAN P73 REMARK 900 TETRAMERIZATION DOMAIN REMARK 900 RELATED ID: 2WQI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN P73 TETRAMERIZATION DOMAIN REMARK 900 RELATED ID: 1COK RELATED DB: PDB REMARK 900 STRUCTURE OF THE C-TERMINAL DOMAIN OF P73 REMARK 900 RELATED ID: 2WTT RELATED DB: PDB REMARK 900 STRUCTURE OF THE HUMAN P73 TETRAMERIZATION DOMAIN (CRYSTAL FORM II) REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 312-318 ARE DUE TO CLONING. INITIATOR METHIONINE REMARK 999 IS ENGINEERED. DBREF 2XWC A 112 311 UNP O15350 P73_HUMAN 112 311 SEQADV 2XWC MET A 111 UNP O15350 EXPRESSION TAG SEQADV 2XWC ALA A 312 UNP O15350 EXPRESSION TAG SEQADV 2XWC GLU A 313 UNP O15350 EXPRESSION TAG SEQADV 2XWC ASN A 314 UNP O15350 EXPRESSION TAG SEQADV 2XWC LEU A 315 UNP O15350 EXPRESSION TAG SEQADV 2XWC TYR A 316 UNP O15350 EXPRESSION TAG SEQADV 2XWC PHE A 317 UNP O15350 EXPRESSION TAG SEQADV 2XWC GLN A 318 UNP O15350 EXPRESSION TAG SEQRES 1 A 208 MET ALA PRO VAL ILE PRO SER ASN THR ASP TYR PRO GLY SEQRES 2 A 208 PRO HIS HIS PHE GLU VAL THR PHE GLN GLN SER SER THR SEQRES 3 A 208 ALA LYS SER ALA THR TRP THR TYR SER PRO LEU LEU LYS SEQRES 4 A 208 LYS LEU TYR CYS GLN ILE ALA LYS THR CYS PRO ILE GLN SEQRES 5 A 208 ILE LYS VAL SER THR PRO PRO PRO PRO GLY THR ALA ILE SEQRES 6 A 208 ARG ALA MET PRO VAL TYR LYS LYS ALA GLU HIS VAL THR SEQRES 7 A 208 ASP VAL VAL LYS ARG CYS PRO ASN HIS GLU LEU GLY ARG SEQRES 8 A 208 ASP PHE ASN GLU GLY GLN SER ALA PRO ALA SER HIS LEU SEQRES 9 A 208 ILE ARG VAL GLU GLY ASN ASN LEU SER GLN TYR VAL ASP SEQRES 10 A 208 ASP PRO VAL THR GLY ARG GLN SER VAL VAL VAL PRO TYR SEQRES 11 A 208 GLU PRO PRO GLN VAL GLY THR GLU PHE THR THR ILE LEU SEQRES 12 A 208 TYR ASN PHE MET CYS ASN SER SER CYS VAL GLY GLY MET SEQRES 13 A 208 ASN ARG ARG PRO ILE LEU ILE ILE ILE THR LEU GLU MET SEQRES 14 A 208 ARG ASP GLY GLN VAL LEU GLY ARG ARG SER PHE GLU GLY SEQRES 15 A 208 ARG ILE CYS ALA CYS PRO GLY ARG ASP ARG LYS ALA ASP SEQRES 16 A 208 GLU ASP HIS TYR ARG GLU ALA GLU ASN LEU TYR PHE GLN HET ZN A1319 1 HET ZN A1320 1 HET TAM A1321 11 HET GOL A1322 6 HETNAM ZN ZINC ION HETNAM TAM TRIS(HYDROXYETHYL)AMINOMETHANE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN 2(ZN 2+) FORMUL 4 TAM C7 H17 N O3 FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *175(H2 O) HELIX 1 1 CYS A 194 GLY A 200 1 7 HELIX 2 2 ASN A 259 VAL A 263 5 5 HELIX 3 3 CYS A 297 ASN A 314 1 18 SHEET 1 AA 4 GLU A 128 THR A 130 0 SHEET 2 AA 4 THR A 158 LYS A 164 -1 O GLN A 162 N THR A 130 SHEET 3 AA 4 THR A 250 PHE A 256 -1 O THR A 250 N ILE A 163 SHEET 4 AA 4 ILE A 215 GLU A 218 -1 O ARG A 216 N ASN A 255 SHEET 1 AB 7 TRP A 142 SER A 145 0 SHEET 2 AB 7 LYS A 150 CYS A 153 -1 O LYS A 150 N SER A 145 SHEET 3 AB 7 VAL A 284 ILE A 294 1 O GLU A 291 N LEU A 151 SHEET 4 AB 7 ILE A 271 GLU A 278 -1 O ILE A 271 N GLY A 292 SHEET 5 AB 7 ALA A 174 TYR A 181 -1 O ALA A 174 N GLU A 278 SHEET 6 AB 7 GLN A 234 PRO A 239 -1 O VAL A 236 N ALA A 177 SHEET 7 AB 7 GLN A 224 ASP A 227 -1 O GLN A 224 N VAL A 237 SSBOND 1 CYS A 153 CYS A 159 1555 1555 2.01 LINK ZN ZN A1319 SG CYS A 258 1555 1555 2.35 LINK ZN ZN A1319 SG CYS A 262 1555 1555 2.38 LINK ZN ZN A1319 SG CYS A 194 1555 1555 2.38 LINK ZN ZN A1319 ND1 HIS A 197 1555 1555 1.79 LINK ZN ZN A1320 OD1 ASP A 301 1555 1555 2.03 LINK ZN ZN A1320 SG CYS A 297 1555 1555 2.33 LINK ZN ZN A1320 NE2 HIS A 308 1555 14555 2.01 LINK ZN ZN A1320 SG CYS A 295 1555 1555 2.34 CISPEP 1 VAL A 263 GLY A 264 0 -12.08 SITE 1 AC1 4 CYS A 194 HIS A 197 CYS A 258 CYS A 262 SITE 1 AC2 4 CYS A 295 CYS A 297 ASP A 301 HIS A 308 SITE 1 AC3 2 PRO A 195 GLU A 198 SITE 1 AC4 4 GLU A 241 GLN A 244 ARG A 287 HOH A2175 CRYST1 110.370 110.370 110.370 90.00 90.00 90.00 P 43 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009060 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009060 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009060 0.00000