data_2XY5 # _entry.id 2XY5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2XY5 pdb_00002xy5 10.2210/pdb2xy5/pdb PDBE EBI-46206 ? ? WWPDB D_1290046206 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2XY6 unspecified 'CRYSTAL STRUCTURE OF A SALICYLIC ALDEHYDE BASEPAIR IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS' PDB 2XO7 unspecified ;CRYSTAL STRUCTURE OF A DA:O- ALLYLHYDROXYLAMINE-DC BASEPAIR IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2XY5 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-11-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kaul, C.' 1 'Mueller, M.' 2 'Wagner, M.' 3 'Schneider, S.' 4 'Carell, T.' 5 # _citation.id primary _citation.title 'Reversible Bond Formation Enables the Replication and Amplification of a Crosslinking Salen Complex as an Orthogonal Base Pair.' _citation.journal_abbrev 'Nature Chem.' _citation.journal_volume 3 _citation.page_first 794 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1755-4330 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21941252 _citation.pdbx_database_id_DOI 10.1038/NCHEM.1117 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kaul, C.' 1 ? primary 'Mueller, M.' 2 ? primary 'Wagner, M.' 3 ? primary 'Schneider, S.' 4 ? primary 'Carell, T.' 5 ? # _cell.entry_id 2XY5 _cell.length_a 88.171 _cell.length_b 93.469 _cell.length_c 105.591 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XY5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA POLYMERASE I' 66290.992 1 2.7.7.7 ? ? ? 2 polymer syn "5'-D(*GP*AP*CP*CP*SAYP*TP*CP*CP*CP*TP)-3'" 2951.951 1 ? ? ? ? 3 polymer syn "5'-D(*AP*GP*GP*GP*AP*SAYP*GP*GP*TP*CP)-3'" 3121.061 1 ? ? ? ? 4 branched man 'alpha-D-fructofuranose-(2-1)-alpha-D-glucopyranose' 342.297 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 6 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 1 ? ? ? ? 7 non-polymer syn 'COPPER (I) ION' 63.546 1 ? ? ? ? 8 non-polymer syn ETHANE-1,2-DIAMINE 60.098 1 ? ? ? ? 9 water nat water 18.015 183 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 POLYDESOXYRIBONUCLEOTIDE 3 POLYDESOXYRIBONUCLEOTIDE 4 'surcrose isoform' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AAKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKR AAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIW ALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLG VILFEKLQLPVLKKSKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGR LSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSED EVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPD ITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEEMERLCRLVPEVMEQA VTLRVPLKVDYHYGSTWYDAK ; ;AAKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKR AAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIW ALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLG VILFEKLQLPVLKKSKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGR LSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSED EVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPD ITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEEMERLCRLVPEVMEQA VTLRVPLKVDYHYGSTWYDAK ; A ? 2 polydeoxyribonucleotide no yes '(DG)(DA)(DC)(DC)(SAY)(DT)(DC)(DC)(DC)(DT)' GACCXTCCCT B ? 3 polydeoxyribonucleotide no yes '(DA)(DG)(DG)(DG)(DA)(SAY)(DG)(DG)(DT)(DC)' AGGGAXGGTC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 LYS n 1 4 MET n 1 5 ALA n 1 6 PHE n 1 7 THR n 1 8 LEU n 1 9 ALA n 1 10 ASP n 1 11 ARG n 1 12 VAL n 1 13 THR n 1 14 GLU n 1 15 GLU n 1 16 MET n 1 17 LEU n 1 18 ALA n 1 19 ASP n 1 20 LYS n 1 21 ALA n 1 22 ALA n 1 23 LEU n 1 24 VAL n 1 25 VAL n 1 26 GLU n 1 27 VAL n 1 28 VAL n 1 29 GLU n 1 30 GLU n 1 31 ASN n 1 32 TYR n 1 33 HIS n 1 34 ASP n 1 35 ALA n 1 36 PRO n 1 37 ILE n 1 38 VAL n 1 39 GLY n 1 40 ILE n 1 41 ALA n 1 42 VAL n 1 43 VAL n 1 44 ASN n 1 45 GLU n 1 46 HIS n 1 47 GLY n 1 48 ARG n 1 49 PHE n 1 50 PHE n 1 51 LEU n 1 52 ARG n 1 53 PRO n 1 54 GLU n 1 55 THR n 1 56 ALA n 1 57 LEU n 1 58 ALA n 1 59 ASP n 1 60 PRO n 1 61 GLN n 1 62 PHE n 1 63 VAL n 1 64 ALA n 1 65 TRP n 1 66 LEU n 1 67 GLY n 1 68 ASP n 1 69 GLU n 1 70 THR n 1 71 LYS n 1 72 LYS n 1 73 LYS n 1 74 SER n 1 75 MET n 1 76 PHE n 1 77 ASP n 1 78 SER n 1 79 LYS n 1 80 ARG n 1 81 ALA n 1 82 ALA n 1 83 VAL n 1 84 ALA n 1 85 LEU n 1 86 LYS n 1 87 TRP n 1 88 LYS n 1 89 GLY n 1 90 ILE n 1 91 GLU n 1 92 LEU n 1 93 CYS n 1 94 GLY n 1 95 VAL n 1 96 SER n 1 97 PHE n 1 98 ASP n 1 99 LEU n 1 100 LEU n 1 101 LEU n 1 102 ALA n 1 103 ALA n 1 104 TYR n 1 105 LEU n 1 106 LEU n 1 107 ASP n 1 108 PRO n 1 109 ALA n 1 110 GLN n 1 111 GLY n 1 112 VAL n 1 113 ASP n 1 114 ASP n 1 115 VAL n 1 116 ALA n 1 117 ALA n 1 118 ALA n 1 119 ALA n 1 120 LYS n 1 121 MET n 1 122 LYS n 1 123 GLN n 1 124 TYR n 1 125 GLU n 1 126 ALA n 1 127 VAL n 1 128 ARG n 1 129 PRO n 1 130 ASP n 1 131 GLU n 1 132 ALA n 1 133 VAL n 1 134 TYR n 1 135 GLY n 1 136 LYS n 1 137 GLY n 1 138 ALA n 1 139 LYS n 1 140 ARG n 1 141 ALA n 1 142 VAL n 1 143 PRO n 1 144 ASP n 1 145 GLU n 1 146 PRO n 1 147 VAL n 1 148 LEU n 1 149 ALA n 1 150 GLU n 1 151 HIS n 1 152 LEU n 1 153 VAL n 1 154 ARG n 1 155 LYS n 1 156 ALA n 1 157 ALA n 1 158 ALA n 1 159 ILE n 1 160 TRP n 1 161 ALA n 1 162 LEU n 1 163 GLU n 1 164 ARG n 1 165 PRO n 1 166 PHE n 1 167 LEU n 1 168 ASP n 1 169 GLU n 1 170 LEU n 1 171 ARG n 1 172 ARG n 1 173 ASN n 1 174 GLU n 1 175 GLN n 1 176 ASP n 1 177 ARG n 1 178 LEU n 1 179 LEU n 1 180 VAL n 1 181 GLU n 1 182 LEU n 1 183 GLU n 1 184 GLN n 1 185 PRO n 1 186 LEU n 1 187 SER n 1 188 SER n 1 189 ILE n 1 190 LEU n 1 191 ALA n 1 192 GLU n 1 193 MET n 1 194 GLU n 1 195 PHE n 1 196 ALA n 1 197 GLY n 1 198 VAL n 1 199 LYS n 1 200 VAL n 1 201 ASP n 1 202 THR n 1 203 LYS n 1 204 ARG n 1 205 LEU n 1 206 GLU n 1 207 GLN n 1 208 MET n 1 209 GLY n 1 210 GLU n 1 211 GLU n 1 212 LEU n 1 213 ALA n 1 214 GLU n 1 215 GLN n 1 216 LEU n 1 217 ARG n 1 218 THR n 1 219 VAL n 1 220 GLU n 1 221 GLN n 1 222 ARG n 1 223 ILE n 1 224 TYR n 1 225 GLU n 1 226 LEU n 1 227 ALA n 1 228 GLY n 1 229 GLN n 1 230 GLU n 1 231 PHE n 1 232 ASN n 1 233 ILE n 1 234 ASN n 1 235 SER n 1 236 PRO n 1 237 LYS n 1 238 GLN n 1 239 LEU n 1 240 GLY n 1 241 VAL n 1 242 ILE n 1 243 LEU n 1 244 PHE n 1 245 GLU n 1 246 LYS n 1 247 LEU n 1 248 GLN n 1 249 LEU n 1 250 PRO n 1 251 VAL n 1 252 LEU n 1 253 LYS n 1 254 LYS n 1 255 SER n 1 256 LYS n 1 257 THR n 1 258 GLY n 1 259 TYR n 1 260 SER n 1 261 THR n 1 262 SER n 1 263 ALA n 1 264 ASP n 1 265 VAL n 1 266 LEU n 1 267 GLU n 1 268 LYS n 1 269 LEU n 1 270 ALA n 1 271 PRO n 1 272 TYR n 1 273 HIS n 1 274 GLU n 1 275 ILE n 1 276 VAL n 1 277 GLU n 1 278 ASN n 1 279 ILE n 1 280 LEU n 1 281 HIS n 1 282 TYR n 1 283 ARG n 1 284 GLN n 1 285 LEU n 1 286 GLY n 1 287 LYS n 1 288 LEU n 1 289 GLN n 1 290 SER n 1 291 THR n 1 292 TYR n 1 293 ILE n 1 294 GLU n 1 295 GLY n 1 296 LEU n 1 297 LEU n 1 298 LYS n 1 299 VAL n 1 300 VAL n 1 301 ARG n 1 302 PRO n 1 303 ASP n 1 304 THR n 1 305 LYS n 1 306 LYS n 1 307 VAL n 1 308 HIS n 1 309 THR n 1 310 ILE n 1 311 PHE n 1 312 ASN n 1 313 GLN n 1 314 ALA n 1 315 LEU n 1 316 THR n 1 317 GLN n 1 318 THR n 1 319 GLY n 1 320 ARG n 1 321 LEU n 1 322 SER n 1 323 SER n 1 324 THR n 1 325 GLU n 1 326 PRO n 1 327 ASN n 1 328 LEU n 1 329 GLN n 1 330 ASN n 1 331 ILE n 1 332 PRO n 1 333 ILE n 1 334 ARG n 1 335 LEU n 1 336 GLU n 1 337 GLU n 1 338 GLY n 1 339 ARG n 1 340 LYS n 1 341 ILE n 1 342 ARG n 1 343 GLN n 1 344 ALA n 1 345 PHE n 1 346 VAL n 1 347 PRO n 1 348 SER n 1 349 GLU n 1 350 SER n 1 351 ASP n 1 352 TRP n 1 353 LEU n 1 354 ILE n 1 355 PHE n 1 356 ALA n 1 357 ALA n 1 358 ASP n 1 359 TYR n 1 360 SER n 1 361 GLN n 1 362 ILE n 1 363 GLU n 1 364 LEU n 1 365 ARG n 1 366 VAL n 1 367 LEU n 1 368 ALA n 1 369 HIS n 1 370 ILE n 1 371 ALA n 1 372 GLU n 1 373 ASP n 1 374 ASP n 1 375 ASN n 1 376 LEU n 1 377 MET n 1 378 GLU n 1 379 ALA n 1 380 PHE n 1 381 ARG n 1 382 ARG n 1 383 ASP n 1 384 LEU n 1 385 ASP n 1 386 ILE n 1 387 HIS n 1 388 THR n 1 389 LYS n 1 390 THR n 1 391 ALA n 1 392 MET n 1 393 ASP n 1 394 ILE n 1 395 PHE n 1 396 GLN n 1 397 VAL n 1 398 SER n 1 399 GLU n 1 400 ASP n 1 401 GLU n 1 402 VAL n 1 403 THR n 1 404 PRO n 1 405 ASN n 1 406 MET n 1 407 ARG n 1 408 ARG n 1 409 GLN n 1 410 ALA n 1 411 LYS n 1 412 ALA n 1 413 VAL n 1 414 ASN n 1 415 PHE n 1 416 GLY n 1 417 ILE n 1 418 VAL n 1 419 TYR n 1 420 GLY n 1 421 ILE n 1 422 SER n 1 423 ASP n 1 424 TYR n 1 425 GLY n 1 426 LEU n 1 427 ALA n 1 428 GLN n 1 429 ASN n 1 430 LEU n 1 431 ASN n 1 432 ILE n 1 433 SER n 1 434 ARG n 1 435 LYS n 1 436 GLU n 1 437 ALA n 1 438 ALA n 1 439 GLU n 1 440 PHE n 1 441 ILE n 1 442 GLU n 1 443 ARG n 1 444 TYR n 1 445 PHE n 1 446 GLU n 1 447 SER n 1 448 PHE n 1 449 PRO n 1 450 GLY n 1 451 VAL n 1 452 LYS n 1 453 ARG n 1 454 TYR n 1 455 MET n 1 456 GLU n 1 457 ASN n 1 458 ILE n 1 459 VAL n 1 460 GLN n 1 461 GLU n 1 462 ALA n 1 463 LYS n 1 464 GLN n 1 465 LYS n 1 466 GLY n 1 467 TYR n 1 468 VAL n 1 469 THR n 1 470 THR n 1 471 LEU n 1 472 LEU n 1 473 HIS n 1 474 ARG n 1 475 ARG n 1 476 ARG n 1 477 TYR n 1 478 LEU n 1 479 PRO n 1 480 ASP n 1 481 ILE n 1 482 THR n 1 483 SER n 1 484 ARG n 1 485 ASN n 1 486 PHE n 1 487 ASN n 1 488 VAL n 1 489 ARG n 1 490 SER n 1 491 PHE n 1 492 ALA n 1 493 GLU n 1 494 ARG n 1 495 MET n 1 496 ALA n 1 497 MET n 1 498 ASN n 1 499 THR n 1 500 PRO n 1 501 ILE n 1 502 GLN n 1 503 GLY n 1 504 SER n 1 505 ALA n 1 506 ALA n 1 507 ASP n 1 508 ILE n 1 509 ILE n 1 510 LYS n 1 511 LYS n 1 512 ALA n 1 513 MET n 1 514 ILE n 1 515 ASP n 1 516 LEU n 1 517 ASN n 1 518 ALA n 1 519 ARG n 1 520 LEU n 1 521 LYS n 1 522 GLU n 1 523 GLU n 1 524 ARG n 1 525 LEU n 1 526 GLN n 1 527 ALA n 1 528 ARG n 1 529 LEU n 1 530 LEU n 1 531 LEU n 1 532 GLN n 1 533 VAL n 1 534 HIS n 1 535 ASP n 1 536 GLU n 1 537 LEU n 1 538 ILE n 1 539 LEU n 1 540 GLU n 1 541 ALA n 1 542 PRO n 1 543 LYS n 1 544 GLU n 1 545 GLU n 1 546 MET n 1 547 GLU n 1 548 ARG n 1 549 LEU n 1 550 CYS n 1 551 ARG n 1 552 LEU n 1 553 VAL n 1 554 PRO n 1 555 GLU n 1 556 VAL n 1 557 MET n 1 558 GLU n 1 559 GLN n 1 560 ALA n 1 561 VAL n 1 562 THR n 1 563 LEU n 1 564 ARG n 1 565 VAL n 1 566 PRO n 1 567 LEU n 1 568 LYS n 1 569 VAL n 1 570 ASP n 1 571 TYR n 1 572 HIS n 1 573 TYR n 1 574 GLY n 1 575 SER n 1 576 THR n 1 577 TRP n 1 578 TYR n 1 579 ASP n 1 580 ALA n 1 581 LYS n 2 1 DG n 2 2 DA n 2 3 DC n 2 4 DC n 2 5 SAY n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DC n 2 10 DT n 3 1 DA n 3 2 DG n 3 3 DG n 3 4 DG n 3 5 DA n 3 6 SAY n 3 7 DG n 3 8 DG n 3 9 DT n 3 10 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 22' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'GEOBACILLUS STEAROTHERMOPHILUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 12980 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'GERMAN COLLECTION OF MICROORGANISMS (DSM)' # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? 3 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP E1C9K5_BACST 1 ? ? E1C9K5 ? 2 PDB 2XY5 2 ? ? 2XY5 ? 3 PDB 2XY5 3 ? ? 2XY5 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2XY5 A 2 ? 581 ? E1C9K5 1 ? 580 ? 297 876 2 2 2XY5 B 1 ? 10 ? 2XY5 20 ? 29 ? 20 29 3 3 2XY5 C 1 ? 10 ? 2XY5 4 ? 13 ? 4 13 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2XY5 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code E1C9K5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 296 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CU1 non-polymer . 'COPPER (I) ION' ? 'Cu 1' 63.546 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDN non-polymer . ETHANE-1,2-DIAMINE ETHYLENEDIAMINE 'C2 H8 N2' 60.098 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAY 'DNA linking' . '[(2R,3S,5R)-3-hydroxy-5-(3-hydroxy-4-methanoyl-phenyl)oxolan-2-yl]methyl dihydrogen phosphate' "2'-DEOXY-1'-(3-HYDROXY-4-FORMYLPHENYL)RIBOSE-5'-MONOPHOSPHATE" 'C12 H15 O8 P' 318.216 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 Z9N 'D-saccharide, alpha linking' . alpha-D-fructofuranose 'alpha-D-fructose; D-fructose; fructose' 'C6 H12 O6' 180.156 # _exptl.entry_id 2XY5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.3 _exptl_crystal.density_percent_sol 62.7 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2009-12-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.3785 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 1.3785 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2XY5 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 93.47 _reflns.d_resolution_high 2.22 _reflns.number_obs 43840 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.90 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.22 _reflns_shell.d_res_low 2.34 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.43 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.50 _reflns_shell.pdbx_redundancy 4.8 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2XY5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 41587 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 67.68 _refine.ls_d_res_high 2.22 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.19520 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19314 _refine.ls_R_factor_R_free 0.23464 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2189 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.915 _refine.B_iso_mean 21.675 _refine.aniso_B[1][1] 2.20 _refine.aniso_B[2][2] -1.26 _refine.aniso_B[3][3] -0.95 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY.' _refine.pdbx_starting_model 'PDB ENTRY 1U45' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.219 _refine.pdbx_overall_ESU_R_Free 0.188 _refine.overall_SU_ML 0.126 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.938 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4572 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 183 _refine_hist.number_atoms_total 5215 _refine_hist.d_res_high 2.22 _refine_hist.d_res_low 67.68 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 5169 'X-RAY DIFFRACTION' ? r_bond_other_d 0.006 0.020 ? 3371 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.469 2.082 ? 7093 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.904 3.001 ? 8204 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.434 5.000 ? 584 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.037 24.279 ? 222 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.113 15.000 ? 822 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.697 15.000 ? 36 'X-RAY DIFFRACTION' ? r_chiral_restr 0.079 0.200 ? 810 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 5423 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 963 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.685 1.500 ? 2910 'X-RAY DIFFRACTION' ? r_mcbond_other 0.145 1.500 ? 1164 'X-RAY DIFFRACTION' ? r_mcangle_it 1.327 2.000 ? 4676 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.063 3.000 ? 2259 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.316 4.500 ? 2415 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.219 _refine_ls_shell.d_res_low 2.277 _refine_ls_shell.number_reflns_R_work 2985 _refine_ls_shell.R_factor_R_work 0.232 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.293 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 157 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2XY5 _struct.title 'Crystal structure of an artificial salen-copper basepair in complex with fragment DNA polymerase I from Bacillus stearothermophilus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2XY5 _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'TRANSFERASE-DNA COMPLEX, SYNTHETIC BIOLOGY, METAL BASEPAIR, REPLICATION, SALEN COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 7 ? K N N 8 ? L N N 9 ? M N N 9 ? N N N 9 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 13 ? ALA A 18 ? THR A 308 ALA A 313 5 ? 6 HELX_P HELX_P2 2 ARG A 52 ? LEU A 57 ? ARG A 347 LEU A 352 1 ? 6 HELX_P HELX_P3 3 ASP A 59 ? ASP A 68 ? ASP A 354 ASP A 363 1 ? 10 HELX_P HELX_P4 4 ASP A 77 ? TRP A 87 ? ASP A 372 TRP A 382 1 ? 11 HELX_P HELX_P5 5 LEU A 99 ? ASP A 107 ? LEU A 394 ASP A 402 1 ? 9 HELX_P HELX_P6 6 PRO A 108 ? GLY A 111 ? PRO A 403 GLY A 406 5 ? 4 HELX_P HELX_P7 7 ASP A 114 ? MET A 121 ? ASP A 409 MET A 416 1 ? 8 HELX_P HELX_P8 8 PRO A 129 ? GLY A 135 ? PRO A 424 GLY A 430 1 ? 7 HELX_P HELX_P9 9 LYS A 136 ? ARG A 140 ? LYS A 431 ARG A 435 5 ? 5 HELX_P HELX_P10 10 ASP A 144 ? ASN A 173 ? ASP A 439 ASN A 468 1 ? 30 HELX_P HELX_P11 11 GLN A 175 ? LEU A 182 ? GLN A 470 LEU A 477 1 ? 8 HELX_P HELX_P12 12 LEU A 182 ? GLY A 197 ? LEU A 477 GLY A 492 1 ? 16 HELX_P HELX_P13 13 ASP A 201 ? GLY A 228 ? ASP A 496 GLY A 523 1 ? 28 HELX_P HELX_P14 14 SER A 235 ? GLU A 245 ? SER A 530 GLU A 540 1 ? 11 HELX_P HELX_P15 15 SER A 262 ? ALA A 270 ? SER A 557 ALA A 565 1 ? 9 HELX_P HELX_P16 16 PRO A 271 ? HIS A 273 ? PRO A 566 HIS A 568 5 ? 3 HELX_P HELX_P17 17 GLU A 274 ? ILE A 293 ? GLU A 569 ILE A 588 1 ? 20 HELX_P HELX_P18 18 ILE A 293 ? VAL A 300 ? ILE A 588 VAL A 595 1 ? 8 HELX_P HELX_P19 19 LEU A 335 ? LYS A 340 ? LEU A 630 LYS A 635 1 ? 6 HELX_P HELX_P20 20 ILE A 341 ? GLN A 343 ? ILE A 636 GLN A 638 5 ? 3 HELX_P HELX_P21 21 GLN A 361 ? GLU A 372 ? GLN A 656 GLU A 667 1 ? 12 HELX_P HELX_P22 22 ASP A 373 ? ARG A 382 ? ASP A 668 ARG A 677 1 ? 10 HELX_P HELX_P23 23 ASP A 385 ? PHE A 395 ? ASP A 680 PHE A 690 1 ? 11 HELX_P HELX_P24 24 SER A 398 ? VAL A 402 ? SER A 693 VAL A 697 5 ? 5 HELX_P HELX_P25 25 THR A 403 ? TYR A 419 ? THR A 698 TYR A 714 1 ? 17 HELX_P HELX_P26 26 SER A 422 ? ASN A 431 ? SER A 717 ASN A 726 1 ? 10 HELX_P HELX_P27 27 SER A 433 ? PHE A 448 ? SER A 728 PHE A 743 1 ? 16 HELX_P HELX_P28 28 PHE A 448 ? GLY A 466 ? PHE A 743 GLY A 761 1 ? 19 HELX_P HELX_P29 29 PRO A 479 ? SER A 483 ? PRO A 774 SER A 778 5 ? 5 HELX_P HELX_P30 30 ASN A 485 ? GLU A 523 ? ASN A 780 GLU A 818 1 ? 39 HELX_P HELX_P31 31 GLU A 545 ? ALA A 560 ? GLU A 840 ALA A 855 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 4 "O3'" ? ? ? 1_555 B SAY 5 P ? ? B DC 23 B SAY 24 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale2 covale one ? B SAY 5 "O3'" ? ? ? 1_555 B DT 6 P ? ? B SAY 24 B DT 25 1_555 ? ? ? ? ? ? ? 1.591 ? ? covale3 covale both ? B SAY 5 CAG ? ? ? 1_555 K EDN . NAA ? ? B SAY 24 C EDN 1015 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale4 covale both ? C DA 5 "O3'" ? ? ? 1_555 C SAY 6 P ? ? C DA 8 C SAY 9 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale5 covale one ? C SAY 6 "O3'" ? ? ? 1_555 C DG 7 P ? ? C SAY 9 C DG 10 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale6 covale both ? C SAY 6 CAG ? ? ? 1_555 K EDN . NAD ? ? C SAY 9 C EDN 1015 1_555 ? ? ? ? ? ? ? 1.357 ? ? covale7 covale both ? D GLC . C1 ? ? ? 1_555 D Z9N . O2 ? ? D GLC 1 D Z9N 2 1_555 ? ? ? ? ? ? ? 1.407 sing ? metalc1 metalc ? ? B SAY 5 OAR ? ? ? 1_555 J CU1 . CU ? ? B SAY 24 C CU1 1014 1_555 ? ? ? ? ? ? ? 2.012 ? ? metalc2 metalc ? ? C SAY 6 OAR ? ? ? 1_555 J CU1 . CU ? ? C SAY 9 C CU1 1014 1_555 ? ? ? ? ? ? ? 1.817 ? ? metalc3 metalc ? ? J CU1 . CU ? ? ? 1_555 K EDN . NAA ? ? C CU1 1014 C EDN 1015 1_555 ? ? ? ? ? ? ? 1.993 ? ? metalc4 metalc ? ? J CU1 . CU ? ? ? 1_555 K EDN . NAD ? ? C CU1 1014 C EDN 1015 1_555 ? ? ? ? ? ? ? 2.273 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 10 N3 ? ? B DG 20 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 10 O2 ? ? B DG 20 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 10 N4 ? ? B DG 20 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 9 N3 ? ? B DA 21 C DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 9 O4 ? ? B DA 21 C DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 22 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 22 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 22 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 7 N1 ? ? B DC 23 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 7 O6 ? ? B DC 23 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 7 N2 ? ? B DC 23 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 25 C DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 25 C DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 26 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 26 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 26 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 27 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 27 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 27 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 28 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 28 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 28 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 1 N1 ? ? B DT 29 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 1 N6 ? ? B DT 29 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 325 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 620 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 326 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 621 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.54 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 3 ? AC ? 2 ? AD ? 4 ? AE ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? parallel AA 5 6 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel AE 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 7 ? LEU A 8 ? THR A 302 LEU A 303 AA 2 GLY A 47 ? LEU A 51 ? GLY A 342 LEU A 346 AA 3 GLY A 39 ? ASN A 44 ? GLY A 334 ASN A 339 AA 4 LYS A 20 ? GLU A 26 ? LYS A 315 GLU A 321 AA 5 LYS A 72 ? MET A 75 ? LYS A 367 MET A 370 AA 6 VAL A 95 ? ASP A 98 ? VAL A 390 ASP A 393 AB 1 LYS A 306 ? VAL A 307 ? LYS A 601 VAL A 602 AB 2 VAL A 198 ? VAL A 200 ? VAL A 493 VAL A 495 AB 3 PHE A 345 ? VAL A 346 ? PHE A 640 VAL A 641 AC 1 ILE A 310 ? ASN A 312 ? ILE A 605 ASN A 607 AC 2 SER A 322 ? THR A 324 ? SER A 617 THR A 619 AD 1 ARG A 528 ? GLN A 532 ? ARG A 823 GLN A 827 AD 2 GLU A 536 ? PRO A 542 ? GLU A 831 PRO A 837 AD 3 TRP A 352 ? TYR A 359 ? TRP A 647 TYR A 654 AD 4 VAL A 569 ? GLY A 574 ? VAL A 864 GLY A 869 AE 1 TYR A 467 ? THR A 469 ? TYR A 762 THR A 764 AE 2 ARG A 475 ? TYR A 477 ? ARG A 770 TYR A 772 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N THR A 7 ? N THR A 302 O ARG A 48 ? O ARG A 343 AA 2 3 N LEU A 51 ? N LEU A 346 O ILE A 40 ? O ILE A 335 AA 3 4 N VAL A 43 ? N VAL A 338 O ALA A 22 ? O ALA A 317 AA 4 5 N ALA A 21 ? N ALA A 316 O LYS A 72 ? O LYS A 367 AA 5 6 O LYS A 73 ? O LYS A 368 N SER A 96 ? N SER A 391 AB 1 2 N VAL A 307 ? N VAL A 602 O VAL A 198 ? O VAL A 493 AB 2 3 N LYS A 199 ? N LYS A 494 O VAL A 346 ? O VAL A 641 AC 1 2 N ASN A 312 ? N ASN A 607 O SER A 322 ? O SER A 617 AD 1 2 N LEU A 530 ? N LEU A 825 O ILE A 538 ? O ILE A 833 AD 2 3 N ALA A 541 ? N ALA A 836 O LEU A 353 ? O LEU A 648 AD 3 4 N ASP A 358 ? N ASP A 653 O ASP A 570 ? O ASP A 865 AE 1 2 N VAL A 468 ? N VAL A 763 O ARG A 476 ? O ARG A 771 # _database_PDB_matrix.entry_id 2XY5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2XY5 _atom_sites.fract_transf_matrix[1][1] 0.011342 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010699 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009471 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CU N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 296 296 ALA ALA A . n A 1 2 ALA 2 297 297 ALA ALA A . n A 1 3 LYS 3 298 298 LYS LYS A . n A 1 4 MET 4 299 299 MET MET A . n A 1 5 ALA 5 300 300 ALA ALA A . n A 1 6 PHE 6 301 301 PHE PHE A . n A 1 7 THR 7 302 302 THR THR A . n A 1 8 LEU 8 303 303 LEU LEU A . n A 1 9 ALA 9 304 304 ALA ALA A . n A 1 10 ASP 10 305 305 ASP ASP A . n A 1 11 ARG 11 306 306 ARG ARG A . n A 1 12 VAL 12 307 307 VAL VAL A . n A 1 13 THR 13 308 308 THR THR A . n A 1 14 GLU 14 309 309 GLU GLU A . n A 1 15 GLU 15 310 310 GLU GLU A . n A 1 16 MET 16 311 311 MET MET A . n A 1 17 LEU 17 312 312 LEU LEU A . n A 1 18 ALA 18 313 313 ALA ALA A . n A 1 19 ASP 19 314 314 ASP ASP A . n A 1 20 LYS 20 315 315 LYS LYS A . n A 1 21 ALA 21 316 316 ALA ALA A . n A 1 22 ALA 22 317 317 ALA ALA A . n A 1 23 LEU 23 318 318 LEU LEU A . n A 1 24 VAL 24 319 319 VAL VAL A . n A 1 25 VAL 25 320 320 VAL VAL A . n A 1 26 GLU 26 321 321 GLU GLU A . n A 1 27 VAL 27 322 322 VAL VAL A . n A 1 28 VAL 28 323 323 VAL VAL A . n A 1 29 GLU 29 324 324 GLU GLU A . n A 1 30 GLU 30 325 325 GLU GLU A . n A 1 31 ASN 31 326 326 ASN ASN A . n A 1 32 TYR 32 327 327 TYR TYR A . n A 1 33 HIS 33 328 328 HIS HIS A . n A 1 34 ASP 34 329 329 ASP ASP A . n A 1 35 ALA 35 330 330 ALA ALA A . n A 1 36 PRO 36 331 331 PRO PRO A . n A 1 37 ILE 37 332 332 ILE ILE A . n A 1 38 VAL 38 333 333 VAL VAL A . n A 1 39 GLY 39 334 334 GLY GLY A . n A 1 40 ILE 40 335 335 ILE ILE A . n A 1 41 ALA 41 336 336 ALA ALA A . n A 1 42 VAL 42 337 337 VAL VAL A . n A 1 43 VAL 43 338 338 VAL VAL A . n A 1 44 ASN 44 339 339 ASN ASN A . n A 1 45 GLU 45 340 340 GLU GLU A . n A 1 46 HIS 46 341 341 HIS HIS A . n A 1 47 GLY 47 342 342 GLY GLY A . n A 1 48 ARG 48 343 343 ARG ARG A . n A 1 49 PHE 49 344 344 PHE PHE A . n A 1 50 PHE 50 345 345 PHE PHE A . n A 1 51 LEU 51 346 346 LEU LEU A . n A 1 52 ARG 52 347 347 ARG ARG A . n A 1 53 PRO 53 348 348 PRO PRO A . n A 1 54 GLU 54 349 349 GLU GLU A . n A 1 55 THR 55 350 350 THR THR A . n A 1 56 ALA 56 351 351 ALA ALA A . n A 1 57 LEU 57 352 352 LEU LEU A . n A 1 58 ALA 58 353 353 ALA ALA A . n A 1 59 ASP 59 354 354 ASP ASP A . n A 1 60 PRO 60 355 355 PRO PRO A . n A 1 61 GLN 61 356 356 GLN GLN A . n A 1 62 PHE 62 357 357 PHE PHE A . n A 1 63 VAL 63 358 358 VAL VAL A . n A 1 64 ALA 64 359 359 ALA ALA A . n A 1 65 TRP 65 360 360 TRP TRP A . n A 1 66 LEU 66 361 361 LEU LEU A . n A 1 67 GLY 67 362 362 GLY GLY A . n A 1 68 ASP 68 363 363 ASP ASP A . n A 1 69 GLU 69 364 364 GLU GLU A . n A 1 70 THR 70 365 365 THR THR A . n A 1 71 LYS 71 366 366 LYS LYS A . n A 1 72 LYS 72 367 367 LYS LYS A . n A 1 73 LYS 73 368 368 LYS LYS A . n A 1 74 SER 74 369 369 SER SER A . n A 1 75 MET 75 370 370 MET MET A . n A 1 76 PHE 76 371 371 PHE PHE A . n A 1 77 ASP 77 372 372 ASP ASP A . n A 1 78 SER 78 373 373 SER SER A . n A 1 79 LYS 79 374 374 LYS LYS A . n A 1 80 ARG 80 375 375 ARG ARG A . n A 1 81 ALA 81 376 376 ALA ALA A . n A 1 82 ALA 82 377 377 ALA ALA A . n A 1 83 VAL 83 378 378 VAL VAL A . n A 1 84 ALA 84 379 379 ALA ALA A . n A 1 85 LEU 85 380 380 LEU LEU A . n A 1 86 LYS 86 381 381 LYS LYS A . n A 1 87 TRP 87 382 382 TRP TRP A . n A 1 88 LYS 88 383 383 LYS LYS A . n A 1 89 GLY 89 384 384 GLY GLY A . n A 1 90 ILE 90 385 385 ILE ILE A . n A 1 91 GLU 91 386 386 GLU GLU A . n A 1 92 LEU 92 387 387 LEU LEU A . n A 1 93 CYS 93 388 388 CYS CYS A . n A 1 94 GLY 94 389 389 GLY GLY A . n A 1 95 VAL 95 390 390 VAL VAL A . n A 1 96 SER 96 391 391 SER SER A . n A 1 97 PHE 97 392 392 PHE PHE A . n A 1 98 ASP 98 393 393 ASP ASP A . n A 1 99 LEU 99 394 394 LEU LEU A . n A 1 100 LEU 100 395 395 LEU LEU A . n A 1 101 LEU 101 396 396 LEU LEU A . n A 1 102 ALA 102 397 397 ALA ALA A . n A 1 103 ALA 103 398 398 ALA ALA A . n A 1 104 TYR 104 399 399 TYR TYR A . n A 1 105 LEU 105 400 400 LEU LEU A . n A 1 106 LEU 106 401 401 LEU LEU A . n A 1 107 ASP 107 402 402 ASP ASP A . n A 1 108 PRO 108 403 403 PRO PRO A . n A 1 109 ALA 109 404 404 ALA ALA A . n A 1 110 GLN 110 405 405 GLN GLN A . n A 1 111 GLY 111 406 406 GLY GLY A . n A 1 112 VAL 112 407 407 VAL VAL A . n A 1 113 ASP 113 408 408 ASP ASP A . n A 1 114 ASP 114 409 409 ASP ASP A . n A 1 115 VAL 115 410 410 VAL VAL A . n A 1 116 ALA 116 411 411 ALA ALA A . n A 1 117 ALA 117 412 412 ALA ALA A . n A 1 118 ALA 118 413 413 ALA ALA A . n A 1 119 ALA 119 414 414 ALA ALA A . n A 1 120 LYS 120 415 415 LYS LYS A . n A 1 121 MET 121 416 416 MET MET A . n A 1 122 LYS 122 417 417 LYS LYS A . n A 1 123 GLN 123 418 418 GLN GLN A . n A 1 124 TYR 124 419 419 TYR TYR A . n A 1 125 GLU 125 420 420 GLU GLU A . n A 1 126 ALA 126 421 421 ALA ALA A . n A 1 127 VAL 127 422 422 VAL VAL A . n A 1 128 ARG 128 423 423 ARG ARG A . n A 1 129 PRO 129 424 424 PRO PRO A . n A 1 130 ASP 130 425 425 ASP ASP A . n A 1 131 GLU 131 426 426 GLU GLU A . n A 1 132 ALA 132 427 427 ALA ALA A . n A 1 133 VAL 133 428 428 VAL VAL A . n A 1 134 TYR 134 429 429 TYR TYR A . n A 1 135 GLY 135 430 430 GLY GLY A . n A 1 136 LYS 136 431 431 LYS LYS A . n A 1 137 GLY 137 432 432 GLY GLY A . n A 1 138 ALA 138 433 433 ALA ALA A . n A 1 139 LYS 139 434 434 LYS LYS A . n A 1 140 ARG 140 435 435 ARG ARG A . n A 1 141 ALA 141 436 436 ALA ALA A . n A 1 142 VAL 142 437 437 VAL VAL A . n A 1 143 PRO 143 438 438 PRO PRO A . n A 1 144 ASP 144 439 439 ASP ASP A . n A 1 145 GLU 145 440 440 GLU GLU A . n A 1 146 PRO 146 441 441 PRO PRO A . n A 1 147 VAL 147 442 442 VAL VAL A . n A 1 148 LEU 148 443 443 LEU LEU A . n A 1 149 ALA 149 444 444 ALA ALA A . n A 1 150 GLU 150 445 445 GLU GLU A . n A 1 151 HIS 151 446 446 HIS HIS A . n A 1 152 LEU 152 447 447 LEU LEU A . n A 1 153 VAL 153 448 448 VAL VAL A . n A 1 154 ARG 154 449 449 ARG ARG A . n A 1 155 LYS 155 450 450 LYS LYS A . n A 1 156 ALA 156 451 451 ALA ALA A . n A 1 157 ALA 157 452 452 ALA ALA A . n A 1 158 ALA 158 453 453 ALA ALA A . n A 1 159 ILE 159 454 454 ILE ILE A . n A 1 160 TRP 160 455 455 TRP TRP A . n A 1 161 ALA 161 456 456 ALA ALA A . n A 1 162 LEU 162 457 457 LEU LEU A . n A 1 163 GLU 163 458 458 GLU GLU A . n A 1 164 ARG 164 459 459 ARG ARG A . n A 1 165 PRO 165 460 460 PRO PRO A . n A 1 166 PHE 166 461 461 PHE PHE A . n A 1 167 LEU 167 462 462 LEU LEU A . n A 1 168 ASP 168 463 463 ASP ASP A . n A 1 169 GLU 169 464 464 GLU GLU A . n A 1 170 LEU 170 465 465 LEU LEU A . n A 1 171 ARG 171 466 466 ARG ARG A . n A 1 172 ARG 172 467 467 ARG ARG A . n A 1 173 ASN 173 468 468 ASN ASN A . n A 1 174 GLU 174 469 469 GLU GLU A . n A 1 175 GLN 175 470 470 GLN GLN A . n A 1 176 ASP 176 471 471 ASP ASP A . n A 1 177 ARG 177 472 472 ARG ARG A . n A 1 178 LEU 178 473 473 LEU LEU A . n A 1 179 LEU 179 474 474 LEU LEU A . n A 1 180 VAL 180 475 475 VAL VAL A . n A 1 181 GLU 181 476 476 GLU GLU A . n A 1 182 LEU 182 477 477 LEU LEU A . n A 1 183 GLU 183 478 478 GLU GLU A . n A 1 184 GLN 184 479 479 GLN GLN A . n A 1 185 PRO 185 480 480 PRO PRO A . n A 1 186 LEU 186 481 481 LEU LEU A . n A 1 187 SER 187 482 482 SER SER A . n A 1 188 SER 188 483 483 SER SER A . n A 1 189 ILE 189 484 484 ILE ILE A . n A 1 190 LEU 190 485 485 LEU LEU A . n A 1 191 ALA 191 486 486 ALA ALA A . n A 1 192 GLU 192 487 487 GLU GLU A . n A 1 193 MET 193 488 488 MET MET A . n A 1 194 GLU 194 489 489 GLU GLU A . n A 1 195 PHE 195 490 490 PHE PHE A . n A 1 196 ALA 196 491 491 ALA ALA A . n A 1 197 GLY 197 492 492 GLY GLY A . n A 1 198 VAL 198 493 493 VAL VAL A . n A 1 199 LYS 199 494 494 LYS LYS A . n A 1 200 VAL 200 495 495 VAL VAL A . n A 1 201 ASP 201 496 496 ASP ASP A . n A 1 202 THR 202 497 497 THR THR A . n A 1 203 LYS 203 498 498 LYS LYS A . n A 1 204 ARG 204 499 499 ARG ARG A . n A 1 205 LEU 205 500 500 LEU LEU A . n A 1 206 GLU 206 501 501 GLU GLU A . n A 1 207 GLN 207 502 502 GLN GLN A . n A 1 208 MET 208 503 503 MET MET A . n A 1 209 GLY 209 504 504 GLY GLY A . n A 1 210 GLU 210 505 505 GLU GLU A . n A 1 211 GLU 211 506 506 GLU GLU A . n A 1 212 LEU 212 507 507 LEU LEU A . n A 1 213 ALA 213 508 508 ALA ALA A . n A 1 214 GLU 214 509 509 GLU GLU A . n A 1 215 GLN 215 510 510 GLN GLN A . n A 1 216 LEU 216 511 511 LEU LEU A . n A 1 217 ARG 217 512 512 ARG ARG A . n A 1 218 THR 218 513 513 THR THR A . n A 1 219 VAL 219 514 514 VAL VAL A . n A 1 220 GLU 220 515 515 GLU GLU A . n A 1 221 GLN 221 516 516 GLN GLN A . n A 1 222 ARG 222 517 517 ARG ARG A . n A 1 223 ILE 223 518 518 ILE ILE A . n A 1 224 TYR 224 519 519 TYR TYR A . n A 1 225 GLU 225 520 520 GLU GLU A . n A 1 226 LEU 226 521 521 LEU LEU A . n A 1 227 ALA 227 522 522 ALA ALA A . n A 1 228 GLY 228 523 523 GLY GLY A . n A 1 229 GLN 229 524 524 GLN GLN A . n A 1 230 GLU 230 525 525 GLU GLU A . n A 1 231 PHE 231 526 526 PHE PHE A . n A 1 232 ASN 232 527 527 ASN ASN A . n A 1 233 ILE 233 528 528 ILE ILE A . n A 1 234 ASN 234 529 529 ASN ASN A . n A 1 235 SER 235 530 530 SER SER A . n A 1 236 PRO 236 531 531 PRO PRO A . n A 1 237 LYS 237 532 532 LYS LYS A . n A 1 238 GLN 238 533 533 GLN GLN A . n A 1 239 LEU 239 534 534 LEU LEU A . n A 1 240 GLY 240 535 535 GLY GLY A . n A 1 241 VAL 241 536 536 VAL VAL A . n A 1 242 ILE 242 537 537 ILE ILE A . n A 1 243 LEU 243 538 538 LEU LEU A . n A 1 244 PHE 244 539 539 PHE PHE A . n A 1 245 GLU 245 540 540 GLU GLU A . n A 1 246 LYS 246 541 541 LYS LYS A . n A 1 247 LEU 247 542 542 LEU LEU A . n A 1 248 GLN 248 543 543 GLN GLN A . n A 1 249 LEU 249 544 544 LEU LEU A . n A 1 250 PRO 250 545 545 PRO PRO A . n A 1 251 VAL 251 546 546 VAL VAL A . n A 1 252 LEU 252 547 547 LEU LEU A . n A 1 253 LYS 253 548 548 LYS LYS A . n A 1 254 LYS 254 549 549 LYS LYS A . n A 1 255 SER 255 550 550 SER SER A . n A 1 256 LYS 256 551 551 LYS LYS A . n A 1 257 THR 257 552 552 THR THR A . n A 1 258 GLY 258 553 553 GLY GLY A . n A 1 259 TYR 259 554 554 TYR TYR A . n A 1 260 SER 260 555 555 SER SER A . n A 1 261 THR 261 556 556 THR THR A . n A 1 262 SER 262 557 557 SER SER A . n A 1 263 ALA 263 558 558 ALA ALA A . n A 1 264 ASP 264 559 559 ASP ASP A . n A 1 265 VAL 265 560 560 VAL VAL A . n A 1 266 LEU 266 561 561 LEU LEU A . n A 1 267 GLU 267 562 562 GLU GLU A . n A 1 268 LYS 268 563 563 LYS LYS A . n A 1 269 LEU 269 564 564 LEU LEU A . n A 1 270 ALA 270 565 565 ALA ALA A . n A 1 271 PRO 271 566 566 PRO PRO A . n A 1 272 TYR 272 567 567 TYR TYR A . n A 1 273 HIS 273 568 568 HIS HIS A . n A 1 274 GLU 274 569 569 GLU GLU A . n A 1 275 ILE 275 570 570 ILE ILE A . n A 1 276 VAL 276 571 571 VAL VAL A . n A 1 277 GLU 277 572 572 GLU GLU A . n A 1 278 ASN 278 573 573 ASN ASN A . n A 1 279 ILE 279 574 574 ILE ILE A . n A 1 280 LEU 280 575 575 LEU LEU A . n A 1 281 HIS 281 576 576 HIS HIS A . n A 1 282 TYR 282 577 577 TYR TYR A . n A 1 283 ARG 283 578 578 ARG ARG A . n A 1 284 GLN 284 579 579 GLN GLN A . n A 1 285 LEU 285 580 580 LEU LEU A . n A 1 286 GLY 286 581 581 GLY GLY A . n A 1 287 LYS 287 582 582 LYS LYS A . n A 1 288 LEU 288 583 583 LEU LEU A . n A 1 289 GLN 289 584 584 GLN GLN A . n A 1 290 SER 290 585 585 SER SER A . n A 1 291 THR 291 586 586 THR THR A . n A 1 292 TYR 292 587 587 TYR TYR A . n A 1 293 ILE 293 588 588 ILE ILE A . n A 1 294 GLU 294 589 589 GLU GLU A . n A 1 295 GLY 295 590 590 GLY GLY A . n A 1 296 LEU 296 591 591 LEU LEU A . n A 1 297 LEU 297 592 592 LEU LEU A . n A 1 298 LYS 298 593 593 LYS LYS A . n A 1 299 VAL 299 594 594 VAL VAL A . n A 1 300 VAL 300 595 595 VAL VAL A . n A 1 301 ARG 301 596 596 ARG ARG A . n A 1 302 PRO 302 597 597 PRO PRO A . n A 1 303 ASP 303 598 598 ASP ASP A . n A 1 304 THR 304 599 599 THR THR A . n A 1 305 LYS 305 600 600 LYS LYS A . n A 1 306 LYS 306 601 601 LYS LYS A . n A 1 307 VAL 307 602 602 VAL VAL A . n A 1 308 HIS 308 603 603 HIS HIS A . n A 1 309 THR 309 604 604 THR THR A . n A 1 310 ILE 310 605 605 ILE ILE A . n A 1 311 PHE 311 606 606 PHE PHE A . n A 1 312 ASN 312 607 607 ASN ASN A . n A 1 313 GLN 313 608 608 GLN GLN A . n A 1 314 ALA 314 609 609 ALA ALA A . n A 1 315 LEU 315 610 610 LEU LEU A . n A 1 316 THR 316 611 611 THR THR A . n A 1 317 GLN 317 612 612 GLN GLN A . n A 1 318 THR 318 613 613 THR THR A . n A 1 319 GLY 319 614 614 GLY GLY A . n A 1 320 ARG 320 615 615 ARG ARG A . n A 1 321 LEU 321 616 616 LEU LEU A . n A 1 322 SER 322 617 617 SER SER A . n A 1 323 SER 323 618 618 SER SER A . n A 1 324 THR 324 619 619 THR THR A . n A 1 325 GLU 325 620 620 GLU GLU A . n A 1 326 PRO 326 621 621 PRO PRO A . n A 1 327 ASN 327 622 622 ASN ASN A . n A 1 328 LEU 328 623 623 LEU LEU A . n A 1 329 GLN 329 624 624 GLN GLN A . n A 1 330 ASN 330 625 625 ASN ASN A . n A 1 331 ILE 331 626 626 ILE ILE A . n A 1 332 PRO 332 627 627 PRO PRO A . n A 1 333 ILE 333 628 628 ILE ILE A . n A 1 334 ARG 334 629 629 ARG ARG A . n A 1 335 LEU 335 630 630 LEU LEU A . n A 1 336 GLU 336 631 631 GLU GLU A . n A 1 337 GLU 337 632 632 GLU GLU A . n A 1 338 GLY 338 633 633 GLY GLY A . n A 1 339 ARG 339 634 634 ARG ARG A . n A 1 340 LYS 340 635 635 LYS LYS A . n A 1 341 ILE 341 636 636 ILE ILE A . n A 1 342 ARG 342 637 637 ARG ARG A . n A 1 343 GLN 343 638 638 GLN GLN A . n A 1 344 ALA 344 639 639 ALA ALA A . n A 1 345 PHE 345 640 640 PHE PHE A . n A 1 346 VAL 346 641 641 VAL VAL A . n A 1 347 PRO 347 642 642 PRO PRO A . n A 1 348 SER 348 643 643 SER SER A . n A 1 349 GLU 349 644 644 GLU GLU A . n A 1 350 SER 350 645 645 SER SER A . n A 1 351 ASP 351 646 646 ASP ASP A . n A 1 352 TRP 352 647 647 TRP TRP A . n A 1 353 LEU 353 648 648 LEU LEU A . n A 1 354 ILE 354 649 649 ILE ILE A . n A 1 355 PHE 355 650 650 PHE PHE A . n A 1 356 ALA 356 651 651 ALA ALA A . n A 1 357 ALA 357 652 652 ALA ALA A . n A 1 358 ASP 358 653 653 ASP ASP A . n A 1 359 TYR 359 654 654 TYR TYR A . n A 1 360 SER 360 655 655 SER SER A . n A 1 361 GLN 361 656 656 GLN GLN A . n A 1 362 ILE 362 657 657 ILE ILE A . n A 1 363 GLU 363 658 658 GLU GLU A . n A 1 364 LEU 364 659 659 LEU LEU A . n A 1 365 ARG 365 660 660 ARG ARG A . n A 1 366 VAL 366 661 661 VAL VAL A . n A 1 367 LEU 367 662 662 LEU LEU A . n A 1 368 ALA 368 663 663 ALA ALA A . n A 1 369 HIS 369 664 664 HIS HIS A . n A 1 370 ILE 370 665 665 ILE ILE A . n A 1 371 ALA 371 666 666 ALA ALA A . n A 1 372 GLU 372 667 667 GLU GLU A . n A 1 373 ASP 373 668 668 ASP ASP A . n A 1 374 ASP 374 669 669 ASP ASP A . n A 1 375 ASN 375 670 670 ASN ASN A . n A 1 376 LEU 376 671 671 LEU LEU A . n A 1 377 MET 377 672 672 MET MET A . n A 1 378 GLU 378 673 673 GLU GLU A . n A 1 379 ALA 379 674 674 ALA ALA A . n A 1 380 PHE 380 675 675 PHE PHE A . n A 1 381 ARG 381 676 676 ARG ARG A . n A 1 382 ARG 382 677 677 ARG ARG A . n A 1 383 ASP 383 678 678 ASP ASP A . n A 1 384 LEU 384 679 679 LEU LEU A . n A 1 385 ASP 385 680 680 ASP ASP A . n A 1 386 ILE 386 681 681 ILE ILE A . n A 1 387 HIS 387 682 682 HIS HIS A . n A 1 388 THR 388 683 683 THR THR A . n A 1 389 LYS 389 684 684 LYS LYS A . n A 1 390 THR 390 685 685 THR THR A . n A 1 391 ALA 391 686 686 ALA ALA A . n A 1 392 MET 392 687 687 MET MET A . n A 1 393 ASP 393 688 688 ASP ASP A . n A 1 394 ILE 394 689 689 ILE ILE A . n A 1 395 PHE 395 690 690 PHE PHE A . n A 1 396 GLN 396 691 691 GLN GLN A . n A 1 397 VAL 397 692 692 VAL VAL A . n A 1 398 SER 398 693 693 SER SER A . n A 1 399 GLU 399 694 694 GLU GLU A . n A 1 400 ASP 400 695 695 ASP ASP A . n A 1 401 GLU 401 696 696 GLU GLU A . n A 1 402 VAL 402 697 697 VAL VAL A . n A 1 403 THR 403 698 698 THR THR A . n A 1 404 PRO 404 699 699 PRO PRO A . n A 1 405 ASN 405 700 700 ASN ASN A . n A 1 406 MET 406 701 701 MET MET A . n A 1 407 ARG 407 702 702 ARG ARG A . n A 1 408 ARG 408 703 703 ARG ARG A . n A 1 409 GLN 409 704 704 GLN GLN A . n A 1 410 ALA 410 705 705 ALA ALA A . n A 1 411 LYS 411 706 706 LYS LYS A . n A 1 412 ALA 412 707 707 ALA ALA A . n A 1 413 VAL 413 708 708 VAL VAL A . n A 1 414 ASN 414 709 709 ASN ASN A . n A 1 415 PHE 415 710 710 PHE PHE A . n A 1 416 GLY 416 711 711 GLY GLY A . n A 1 417 ILE 417 712 712 ILE ILE A . n A 1 418 VAL 418 713 713 VAL VAL A . n A 1 419 TYR 419 714 714 TYR TYR A . n A 1 420 GLY 420 715 715 GLY GLY A . n A 1 421 ILE 421 716 716 ILE ILE A . n A 1 422 SER 422 717 717 SER SER A . n A 1 423 ASP 423 718 718 ASP ASP A . n A 1 424 TYR 424 719 719 TYR TYR A . n A 1 425 GLY 425 720 720 GLY GLY A . n A 1 426 LEU 426 721 721 LEU LEU A . n A 1 427 ALA 427 722 722 ALA ALA A . n A 1 428 GLN 428 723 723 GLN GLN A . n A 1 429 ASN 429 724 724 ASN ASN A . n A 1 430 LEU 430 725 725 LEU LEU A . n A 1 431 ASN 431 726 726 ASN ASN A . n A 1 432 ILE 432 727 727 ILE ILE A . n A 1 433 SER 433 728 728 SER SER A . n A 1 434 ARG 434 729 729 ARG ARG A . n A 1 435 LYS 435 730 730 LYS LYS A . n A 1 436 GLU 436 731 731 GLU GLU A . n A 1 437 ALA 437 732 732 ALA ALA A . n A 1 438 ALA 438 733 733 ALA ALA A . n A 1 439 GLU 439 734 734 GLU GLU A . n A 1 440 PHE 440 735 735 PHE PHE A . n A 1 441 ILE 441 736 736 ILE ILE A . n A 1 442 GLU 442 737 737 GLU GLU A . n A 1 443 ARG 443 738 738 ARG ARG A . n A 1 444 TYR 444 739 739 TYR TYR A . n A 1 445 PHE 445 740 740 PHE PHE A . n A 1 446 GLU 446 741 741 GLU GLU A . n A 1 447 SER 447 742 742 SER SER A . n A 1 448 PHE 448 743 743 PHE PHE A . n A 1 449 PRO 449 744 744 PRO PRO A . n A 1 450 GLY 450 745 745 GLY GLY A . n A 1 451 VAL 451 746 746 VAL VAL A . n A 1 452 LYS 452 747 747 LYS LYS A . n A 1 453 ARG 453 748 748 ARG ARG A . n A 1 454 TYR 454 749 749 TYR TYR A . n A 1 455 MET 455 750 750 MET MET A . n A 1 456 GLU 456 751 751 GLU GLU A . n A 1 457 ASN 457 752 752 ASN ASN A . n A 1 458 ILE 458 753 753 ILE ILE A . n A 1 459 VAL 459 754 754 VAL VAL A . n A 1 460 GLN 460 755 755 GLN GLN A . n A 1 461 GLU 461 756 756 GLU GLU A . n A 1 462 ALA 462 757 757 ALA ALA A . n A 1 463 LYS 463 758 758 LYS LYS A . n A 1 464 GLN 464 759 759 GLN GLN A . n A 1 465 LYS 465 760 760 LYS LYS A . n A 1 466 GLY 466 761 761 GLY GLY A . n A 1 467 TYR 467 762 762 TYR TYR A . n A 1 468 VAL 468 763 763 VAL VAL A . n A 1 469 THR 469 764 764 THR THR A . n A 1 470 THR 470 765 765 THR THR A . n A 1 471 LEU 471 766 766 LEU LEU A . n A 1 472 LEU 472 767 767 LEU LEU A . n A 1 473 HIS 473 768 768 HIS HIS A . n A 1 474 ARG 474 769 769 ARG ARG A . n A 1 475 ARG 475 770 770 ARG ARG A . n A 1 476 ARG 476 771 771 ARG ARG A . n A 1 477 TYR 477 772 772 TYR TYR A . n A 1 478 LEU 478 773 773 LEU LEU A . n A 1 479 PRO 479 774 774 PRO PRO A . n A 1 480 ASP 480 775 775 ASP ASP A . n A 1 481 ILE 481 776 776 ILE ILE A . n A 1 482 THR 482 777 777 THR THR A . n A 1 483 SER 483 778 778 SER SER A . n A 1 484 ARG 484 779 779 ARG ARG A . n A 1 485 ASN 485 780 780 ASN ASN A . n A 1 486 PHE 486 781 781 PHE PHE A . n A 1 487 ASN 487 782 782 ASN ASN A . n A 1 488 VAL 488 783 783 VAL VAL A . n A 1 489 ARG 489 784 784 ARG ARG A . n A 1 490 SER 490 785 785 SER SER A . n A 1 491 PHE 491 786 786 PHE PHE A . n A 1 492 ALA 492 787 787 ALA ALA A . n A 1 493 GLU 493 788 788 GLU GLU A . n A 1 494 ARG 494 789 789 ARG ARG A . n A 1 495 MET 495 790 790 MET MET A . n A 1 496 ALA 496 791 791 ALA ALA A . n A 1 497 MET 497 792 792 MET MET A . n A 1 498 ASN 498 793 793 ASN ASN A . n A 1 499 THR 499 794 794 THR THR A . n A 1 500 PRO 500 795 795 PRO PRO A . n A 1 501 ILE 501 796 796 ILE ILE A . n A 1 502 GLN 502 797 797 GLN GLN A . n A 1 503 GLY 503 798 798 GLY GLY A . n A 1 504 SER 504 799 799 SER SER A . n A 1 505 ALA 505 800 800 ALA ALA A . n A 1 506 ALA 506 801 801 ALA ALA A . n A 1 507 ASP 507 802 802 ASP ASP A . n A 1 508 ILE 508 803 803 ILE ILE A . n A 1 509 ILE 509 804 804 ILE ILE A . n A 1 510 LYS 510 805 805 LYS LYS A . n A 1 511 LYS 511 806 806 LYS LYS A . n A 1 512 ALA 512 807 807 ALA ALA A . n A 1 513 MET 513 808 808 MET MET A . n A 1 514 ILE 514 809 809 ILE ILE A . n A 1 515 ASP 515 810 810 ASP ASP A . n A 1 516 LEU 516 811 811 LEU LEU A . n A 1 517 ASN 517 812 812 ASN ASN A . n A 1 518 ALA 518 813 813 ALA ALA A . n A 1 519 ARG 519 814 814 ARG ARG A . n A 1 520 LEU 520 815 815 LEU LEU A . n A 1 521 LYS 521 816 816 LYS LYS A . n A 1 522 GLU 522 817 817 GLU GLU A . n A 1 523 GLU 523 818 818 GLU GLU A . n A 1 524 ARG 524 819 819 ARG ARG A . n A 1 525 LEU 525 820 820 LEU LEU A . n A 1 526 GLN 526 821 821 GLN GLN A . n A 1 527 ALA 527 822 822 ALA ALA A . n A 1 528 ARG 528 823 823 ARG ARG A . n A 1 529 LEU 529 824 824 LEU LEU A . n A 1 530 LEU 530 825 825 LEU LEU A . n A 1 531 LEU 531 826 826 LEU LEU A . n A 1 532 GLN 532 827 827 GLN GLN A . n A 1 533 VAL 533 828 828 VAL VAL A . n A 1 534 HIS 534 829 829 HIS HIS A . n A 1 535 ASP 535 830 830 ASP ASP A . n A 1 536 GLU 536 831 831 GLU GLU A . n A 1 537 LEU 537 832 832 LEU LEU A . n A 1 538 ILE 538 833 833 ILE ILE A . n A 1 539 LEU 539 834 834 LEU LEU A . n A 1 540 GLU 540 835 835 GLU GLU A . n A 1 541 ALA 541 836 836 ALA ALA A . n A 1 542 PRO 542 837 837 PRO PRO A . n A 1 543 LYS 543 838 838 LYS LYS A . n A 1 544 GLU 544 839 839 GLU GLU A . n A 1 545 GLU 545 840 840 GLU GLU A . n A 1 546 MET 546 841 841 MET MET A . n A 1 547 GLU 547 842 842 GLU GLU A . n A 1 548 ARG 548 843 843 ARG ARG A . n A 1 549 LEU 549 844 844 LEU LEU A . n A 1 550 CYS 550 845 845 CYS CYS A . n A 1 551 ARG 551 846 846 ARG ARG A . n A 1 552 LEU 552 847 847 LEU LEU A . n A 1 553 VAL 553 848 848 VAL VAL A . n A 1 554 PRO 554 849 849 PRO PRO A . n A 1 555 GLU 555 850 850 GLU GLU A . n A 1 556 VAL 556 851 851 VAL VAL A . n A 1 557 MET 557 852 852 MET MET A . n A 1 558 GLU 558 853 853 GLU GLU A . n A 1 559 GLN 559 854 854 GLN GLN A . n A 1 560 ALA 560 855 855 ALA ALA A . n A 1 561 VAL 561 856 856 VAL VAL A . n A 1 562 THR 562 857 857 THR THR A . n A 1 563 LEU 563 858 858 LEU LEU A . n A 1 564 ARG 564 859 859 ARG ARG A . n A 1 565 VAL 565 860 860 VAL VAL A . n A 1 566 PRO 566 861 861 PRO PRO A . n A 1 567 LEU 567 862 862 LEU LEU A . n A 1 568 LYS 568 863 863 LYS LYS A . n A 1 569 VAL 569 864 864 VAL VAL A . n A 1 570 ASP 570 865 865 ASP ASP A . n A 1 571 TYR 571 866 866 TYR TYR A . n A 1 572 HIS 572 867 867 HIS HIS A . n A 1 573 TYR 573 868 868 TYR TYR A . n A 1 574 GLY 574 869 869 GLY GLY A . n A 1 575 SER 575 870 870 SER SER A . n A 1 576 THR 576 871 871 THR THR A . n A 1 577 TRP 577 872 872 TRP TRP A . n A 1 578 TYR 578 873 873 TYR TYR A . n A 1 579 ASP 579 874 874 ASP ASP A . n A 1 580 ALA 580 875 875 ALA ALA A . n A 1 581 LYS 581 876 876 LYS LYS A . n B 2 1 DG 1 20 20 DG DG B . n B 2 2 DA 2 21 21 DA DA B . n B 2 3 DC 3 22 22 DC DC B . n B 2 4 DC 4 23 23 DC DC B . n B 2 5 SAY 5 24 24 SAY SAY B . n B 2 6 DT 6 25 25 DT DT B . n B 2 7 DC 7 26 26 DC DC B . n B 2 8 DC 8 27 27 DC DC B . n B 2 9 DC 9 28 28 DC DC B . n B 2 10 DT 10 29 29 DT DT B . n C 3 1 DA 1 4 4 DA DA C . n C 3 2 DG 2 5 5 DG DG C . n C 3 3 DG 3 6 6 DG DG C . n C 3 4 DG 4 7 7 DG DG C . n C 3 5 DA 5 8 8 DA DA C . n C 3 6 SAY 6 9 9 SAY SAY C . n C 3 7 DG 7 10 10 DG DG C . n C 3 8 DG 8 11 11 DG DG C . n C 3 9 DT 9 12 12 DT DT C . n C 3 10 DC 10 13 13 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 SO4 1 1877 1877 SO4 SO4 A . F 5 SO4 1 1878 1878 SO4 SO4 A . G 5 SO4 1 1879 1879 SO4 SO4 A . H 5 SO4 1 1880 1880 SO4 SO4 A . I 6 MRD 1 1881 1881 MRD MRD A . J 7 CU1 1 1014 1014 CU1 CU1 C . K 8 EDN 1 1015 1015 EDN EDN C . L 9 HOH 1 2001 2001 HOH HOH A . L 9 HOH 2 2002 2002 HOH HOH A . L 9 HOH 3 2003 2003 HOH HOH A . L 9 HOH 4 2004 2004 HOH HOH A . L 9 HOH 5 2005 2005 HOH HOH A . L 9 HOH 6 2006 2006 HOH HOH A . L 9 HOH 7 2007 2007 HOH HOH A . L 9 HOH 8 2008 2008 HOH HOH A . L 9 HOH 9 2009 2009 HOH HOH A . L 9 HOH 10 2010 2010 HOH HOH A . L 9 HOH 11 2011 2011 HOH HOH A . L 9 HOH 12 2012 2012 HOH HOH A . L 9 HOH 13 2013 2013 HOH HOH A . L 9 HOH 14 2014 2014 HOH HOH A . L 9 HOH 15 2015 2015 HOH HOH A . L 9 HOH 16 2016 2016 HOH HOH A . L 9 HOH 17 2017 2017 HOH HOH A . L 9 HOH 18 2018 2018 HOH HOH A . L 9 HOH 19 2019 2019 HOH HOH A . L 9 HOH 20 2020 2020 HOH HOH A . L 9 HOH 21 2021 2021 HOH HOH A . L 9 HOH 22 2022 2022 HOH HOH A . L 9 HOH 23 2023 2023 HOH HOH A . L 9 HOH 24 2024 2024 HOH HOH A . L 9 HOH 25 2025 2025 HOH HOH A . L 9 HOH 26 2026 2026 HOH HOH A . L 9 HOH 27 2027 2027 HOH HOH A . L 9 HOH 28 2028 2028 HOH HOH A . L 9 HOH 29 2029 2029 HOH HOH A . L 9 HOH 30 2030 2030 HOH HOH A . L 9 HOH 31 2031 2031 HOH HOH A . L 9 HOH 32 2032 2032 HOH HOH A . L 9 HOH 33 2033 2033 HOH HOH A . L 9 HOH 34 2034 2034 HOH HOH A . L 9 HOH 35 2035 2035 HOH HOH A . L 9 HOH 36 2036 2036 HOH HOH A . L 9 HOH 37 2037 2037 HOH HOH A . L 9 HOH 38 2038 2038 HOH HOH A . L 9 HOH 39 2039 2039 HOH HOH A . L 9 HOH 40 2040 2040 HOH HOH A . L 9 HOH 41 2041 2041 HOH HOH A . L 9 HOH 42 2042 2042 HOH HOH A . L 9 HOH 43 2043 2043 HOH HOH A . L 9 HOH 44 2044 2044 HOH HOH A . L 9 HOH 45 2045 2045 HOH HOH A . L 9 HOH 46 2046 2046 HOH HOH A . L 9 HOH 47 2047 2047 HOH HOH A . L 9 HOH 48 2048 2048 HOH HOH A . L 9 HOH 49 2049 2049 HOH HOH A . L 9 HOH 50 2050 2050 HOH HOH A . L 9 HOH 51 2051 2051 HOH HOH A . L 9 HOH 52 2052 2052 HOH HOH A . L 9 HOH 53 2053 2053 HOH HOH A . L 9 HOH 54 2054 2054 HOH HOH A . L 9 HOH 55 2055 2055 HOH HOH A . L 9 HOH 56 2056 2056 HOH HOH A . L 9 HOH 57 2057 2057 HOH HOH A . L 9 HOH 58 2058 2058 HOH HOH A . L 9 HOH 59 2059 2059 HOH HOH A . L 9 HOH 60 2060 2060 HOH HOH A . L 9 HOH 61 2061 2061 HOH HOH A . L 9 HOH 62 2062 2062 HOH HOH A . L 9 HOH 63 2063 2063 HOH HOH A . L 9 HOH 64 2064 2064 HOH HOH A . L 9 HOH 65 2065 2065 HOH HOH A . L 9 HOH 66 2066 2066 HOH HOH A . L 9 HOH 67 2067 2067 HOH HOH A . L 9 HOH 68 2068 2068 HOH HOH A . L 9 HOH 69 2069 2069 HOH HOH A . L 9 HOH 70 2070 2070 HOH HOH A . L 9 HOH 71 2071 2071 HOH HOH A . L 9 HOH 72 2072 2072 HOH HOH A . L 9 HOH 73 2073 2073 HOH HOH A . L 9 HOH 74 2074 2074 HOH HOH A . L 9 HOH 75 2075 2075 HOH HOH A . L 9 HOH 76 2076 2076 HOH HOH A . L 9 HOH 77 2077 2077 HOH HOH A . L 9 HOH 78 2078 2078 HOH HOH A . L 9 HOH 79 2079 2079 HOH HOH A . L 9 HOH 80 2080 2080 HOH HOH A . L 9 HOH 81 2081 2081 HOH HOH A . L 9 HOH 82 2082 2082 HOH HOH A . L 9 HOH 83 2083 2083 HOH HOH A . L 9 HOH 84 2084 2084 HOH HOH A . L 9 HOH 85 2085 2085 HOH HOH A . L 9 HOH 86 2086 2086 HOH HOH A . L 9 HOH 87 2087 2087 HOH HOH A . L 9 HOH 88 2088 2088 HOH HOH A . L 9 HOH 89 2089 2089 HOH HOH A . L 9 HOH 90 2090 2090 HOH HOH A . L 9 HOH 91 2091 2091 HOH HOH A . L 9 HOH 92 2092 2092 HOH HOH A . L 9 HOH 93 2093 2093 HOH HOH A . L 9 HOH 94 2094 2094 HOH HOH A . L 9 HOH 95 2095 2095 HOH HOH A . L 9 HOH 96 2096 2096 HOH HOH A . L 9 HOH 97 2097 2097 HOH HOH A . L 9 HOH 98 2098 2098 HOH HOH A . L 9 HOH 99 2099 2099 HOH HOH A . L 9 HOH 100 2100 2100 HOH HOH A . L 9 HOH 101 2101 2101 HOH HOH A . L 9 HOH 102 2102 2102 HOH HOH A . L 9 HOH 103 2103 2103 HOH HOH A . L 9 HOH 104 2104 2104 HOH HOH A . L 9 HOH 105 2105 2105 HOH HOH A . L 9 HOH 106 2106 2106 HOH HOH A . L 9 HOH 107 2107 2107 HOH HOH A . L 9 HOH 108 2108 2108 HOH HOH A . L 9 HOH 109 2109 2109 HOH HOH A . L 9 HOH 110 2110 2110 HOH HOH A . L 9 HOH 111 2111 2111 HOH HOH A . L 9 HOH 112 2112 2112 HOH HOH A . L 9 HOH 113 2113 2113 HOH HOH A . L 9 HOH 114 2114 2114 HOH HOH A . L 9 HOH 115 2115 2115 HOH HOH A . L 9 HOH 116 2116 2116 HOH HOH A . L 9 HOH 117 2117 2117 HOH HOH A . L 9 HOH 118 2118 2118 HOH HOH A . L 9 HOH 119 2119 2119 HOH HOH A . L 9 HOH 120 2120 2120 HOH HOH A . L 9 HOH 121 2121 2121 HOH HOH A . L 9 HOH 122 2122 2122 HOH HOH A . L 9 HOH 123 2123 2123 HOH HOH A . L 9 HOH 124 2124 2124 HOH HOH A . L 9 HOH 125 2125 2125 HOH HOH A . L 9 HOH 126 2126 2126 HOH HOH A . L 9 HOH 127 2127 2127 HOH HOH A . L 9 HOH 128 2128 2128 HOH HOH A . L 9 HOH 129 2129 2129 HOH HOH A . L 9 HOH 130 2130 2130 HOH HOH A . L 9 HOH 131 2131 2131 HOH HOH A . L 9 HOH 132 2132 2132 HOH HOH A . L 9 HOH 133 2133 2133 HOH HOH A . L 9 HOH 134 2134 2134 HOH HOH A . L 9 HOH 135 2135 2135 HOH HOH A . L 9 HOH 136 2136 2136 HOH HOH A . L 9 HOH 137 2137 2137 HOH HOH A . L 9 HOH 138 2138 2138 HOH HOH A . L 9 HOH 139 2139 2139 HOH HOH A . L 9 HOH 140 2140 2140 HOH HOH A . L 9 HOH 141 2141 2141 HOH HOH A . L 9 HOH 142 2142 2142 HOH HOH A . L 9 HOH 143 2143 2143 HOH HOH A . L 9 HOH 144 2144 2144 HOH HOH A . L 9 HOH 145 2145 2145 HOH HOH A . L 9 HOH 146 2146 2146 HOH HOH A . L 9 HOH 147 2147 2147 HOH HOH A . L 9 HOH 148 2148 2148 HOH HOH A . L 9 HOH 149 2149 2149 HOH HOH A . L 9 HOH 150 2150 2150 HOH HOH A . L 9 HOH 151 2151 2151 HOH HOH A . L 9 HOH 152 2152 2152 HOH HOH A . L 9 HOH 153 2153 2153 HOH HOH A . L 9 HOH 154 2154 2154 HOH HOH A . L 9 HOH 155 2155 2155 HOH HOH A . L 9 HOH 156 2156 2156 HOH HOH A . L 9 HOH 157 2157 2157 HOH HOH A . L 9 HOH 158 2158 2158 HOH HOH A . L 9 HOH 159 2159 2159 HOH HOH A . L 9 HOH 160 2160 2160 HOH HOH A . L 9 HOH 161 2161 2161 HOH HOH A . L 9 HOH 162 2162 2162 HOH HOH A . L 9 HOH 163 2163 2163 HOH HOH A . L 9 HOH 164 2164 2164 HOH HOH A . L 9 HOH 165 2165 2165 HOH HOH A . L 9 HOH 166 2166 2166 HOH HOH A . L 9 HOH 167 2167 2167 HOH HOH A . L 9 HOH 168 2168 2168 HOH HOH A . L 9 HOH 169 2169 2169 HOH HOH A . L 9 HOH 170 2170 2170 HOH HOH A . L 9 HOH 171 2171 2171 HOH HOH A . L 9 HOH 172 2172 2172 HOH HOH A . L 9 HOH 173 2173 2173 HOH HOH A . L 9 HOH 174 2174 2174 HOH HOH A . L 9 HOH 175 2175 2175 HOH HOH A . L 9 HOH 176 2176 2176 HOH HOH A . M 9 HOH 1 2001 2001 HOH HOH B . M 9 HOH 2 2002 2002 HOH HOH B . N 9 HOH 1 2001 2001 HOH HOH C . N 9 HOH 2 2002 2002 HOH HOH C . N 9 HOH 3 2003 2003 HOH HOH C . N 9 HOH 4 2004 2004 HOH HOH C . N 9 HOH 5 2005 2005 HOH HOH C . # _pdbx_molecule_features.prd_id PRD_900032 _pdbx_molecule_features.name 'surcrose isoform' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900032 _pdbx_molecule.asym_id D # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4970 ? 1 MORE -80.0 ? 1 'SSA (A^2)' 27440 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OAR ? B SAY 5 ? B SAY 24 ? 1_555 CU ? J CU1 . ? C CU1 1014 ? 1_555 OAR ? C SAY 6 ? C SAY 9 ? 1_555 89.9 ? 2 OAR ? B SAY 5 ? B SAY 24 ? 1_555 CU ? J CU1 . ? C CU1 1014 ? 1_555 NAA ? K EDN . ? C EDN 1015 ? 1_555 103.9 ? 3 OAR ? C SAY 6 ? C SAY 9 ? 1_555 CU ? J CU1 . ? C CU1 1014 ? 1_555 NAA ? K EDN . ? C EDN 1015 ? 1_555 165.4 ? 4 OAR ? B SAY 5 ? B SAY 24 ? 1_555 CU ? J CU1 . ? C CU1 1014 ? 1_555 NAD ? K EDN . ? C EDN 1015 ? 1_555 162.6 ? 5 OAR ? C SAY 6 ? C SAY 9 ? 1_555 CU ? J CU1 . ? C CU1 1014 ? 1_555 NAD ? K EDN . ? C EDN 1015 ? 1_555 98.4 ? 6 NAA ? K EDN . ? C EDN 1015 ? 1_555 CU ? J CU1 . ? C CU1 1014 ? 1_555 NAD ? K EDN . ? C EDN 1015 ? 1_555 66.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-27 2 'Structure model' 1 1 2011-10-05 3 'Structure model' 1 2 2012-05-30 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' Other 3 3 'Structure model' Other 4 4 'Structure model' Advisory 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Non-polymer description' 9 4 'Structure model' Other 10 4 'Structure model' 'Structure summary' 11 5 'Structure model' 'Data collection' 12 5 'Structure model' 'Database references' 13 5 'Structure model' 'Derived calculations' 14 5 'Structure model' 'Refinement description' 15 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_database_status 8 4 'Structure model' pdbx_entity_branch 9 4 'Structure model' pdbx_entity_branch_descriptor 10 4 'Structure model' pdbx_entity_branch_link 11 4 'Structure model' pdbx_entity_branch_list 12 4 'Structure model' pdbx_entity_nonpoly 13 4 'Structure model' pdbx_molecule_features 14 4 'Structure model' pdbx_nonpoly_scheme 15 4 'Structure model' pdbx_struct_conn_angle 16 4 'Structure model' pdbx_validate_polymer_linkage 17 4 'Structure model' struct_asym 18 4 'Structure model' struct_conn 19 4 'Structure model' struct_site 20 4 'Structure model' struct_site_gen 21 5 'Structure model' chem_comp 22 5 'Structure model' chem_comp_atom 23 5 'Structure model' chem_comp_bond 24 5 'Structure model' database_2 25 5 'Structure model' pdbx_initial_refinement_model 26 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.occupancy' 14 4 'Structure model' '_atom_site.type_symbol' 15 4 'Structure model' '_chem_comp.formula' 16 4 'Structure model' '_chem_comp.formula_weight' 17 4 'Structure model' '_chem_comp.id' 18 4 'Structure model' '_chem_comp.mon_nstd_flag' 19 4 'Structure model' '_chem_comp.name' 20 4 'Structure model' '_chem_comp.pdbx_synonyms' 21 4 'Structure model' '_chem_comp.type' 22 4 'Structure model' '_entity.formula_weight' 23 4 'Structure model' '_entity.pdbx_description' 24 4 'Structure model' '_entity.pdbx_number_of_molecules' 25 4 'Structure model' '_entity.src_method' 26 4 'Structure model' '_entity.type' 27 4 'Structure model' '_pdbx_database_status.status_code_sf' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 34 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 35 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 36 4 'Structure model' '_pdbx_struct_conn_angle.value' 37 4 'Structure model' '_struct_asym.entity_id' 38 5 'Structure model' '_chem_comp.pdbx_synonyms' 39 5 'Structure model' '_database_2.pdbx_DOI' 40 5 'Structure model' '_database_2.pdbx_database_accession' 41 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 2XY5 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;EDN: REACTS WITH SAY AND CU1 TO YIELD A CROSSLINK OF TWO DNA STRANDS. 2 H2O ARE RELEASED. MRD: 2-METHYL-2,4-PENTANEDIOL ALSO KNOWN AS HEXYLENE GLYCOL SAY: 2'-DEOXY-1'-(3-HYDROXY-4-FORMYLPHENYL)RIBOSE-5'-MONOPHOSPHATE ; _pdbx_entry_details.sequence_details ;THE ENTRY ABOVE IS NOT FROM STRAIN DSM22, BUT HAS MAXIMUM IDENTITY. ONLY THR 550 IS SER IN OUR SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 598 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2079 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.68 108.30 2.38 0.30 N 2 1 "O4'" B DT 25 ? ? "C1'" B DT 25 ? ? N1 B DT 25 ? ? 116.07 108.30 7.77 0.30 N 3 1 "O4'" B DC 26 ? ? "C1'" B DC 26 ? ? N1 B DC 26 ? ? 110.84 108.30 2.54 0.30 N 4 1 "O4'" B DC 27 ? ? "C1'" B DC 27 ? ? N1 B DC 27 ? ? 110.72 108.30 2.42 0.30 N 5 1 "O4'" B DC 28 ? ? "C1'" B DC 28 ? ? N1 B DC 28 ? ? 111.35 108.30 3.05 0.30 N 6 1 "O4'" C DG 5 ? ? "C1'" C DG 5 ? ? N9 C DG 5 ? ? 110.37 108.30 2.07 0.30 N 7 1 "O4'" C DG 6 ? ? "C1'" C DG 6 ? ? N9 C DG 6 ? ? 111.68 108.30 3.38 0.30 N 8 1 "O4'" C DA 8 ? ? "C1'" C DA 8 ? ? N9 C DA 8 ? ? 112.53 108.30 4.23 0.30 N 9 1 C5 C DT 12 ? ? C4 C DT 12 ? ? O4 C DT 12 ? ? 120.67 124.90 -4.23 0.70 N 10 1 "O4'" C DC 13 ? ? "C1'" C DC 13 ? ? N1 C DC 13 ? ? 111.08 108.30 2.78 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 421 ? ? -84.97 41.70 2 1 GLU A 540 ? ? -121.53 -63.47 3 1 ILE A 588 ? ? -107.29 -70.75 4 1 LEU A 610 ? ? -121.44 -59.50 5 1 ILE A 628 ? ? -145.15 -31.48 6 1 HIS A 768 ? ? 85.85 19.16 7 1 HIS A 829 ? ? 71.37 -54.82 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 "C3'" B SAY 24 ? ? P B DT 25 ? ? 2.66 2 1 "C3'" C SAY 9 ? ? P C DG 10 ? ? 2.63 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 306 ? CD ? A ARG 11 CD 2 1 Y 1 A ARG 306 ? NE ? A ARG 11 NE 3 1 Y 1 A ARG 306 ? CZ ? A ARG 11 CZ 4 1 Y 1 A ARG 306 ? NH1 ? A ARG 11 NH1 5 1 Y 1 A ARG 306 ? NH2 ? A ARG 11 NH2 6 1 Y 1 A GLU 364 ? CD ? A GLU 69 CD 7 1 Y 1 A GLU 364 ? OE1 ? A GLU 69 OE1 8 1 Y 1 A GLU 364 ? OE2 ? A GLU 69 OE2 9 1 Y 1 A LYS 431 ? CE ? A LYS 136 CE 10 1 Y 1 A LYS 431 ? NZ ? A LYS 136 NZ 11 1 Y 1 A LYS 434 ? CG ? A LYS 139 CG 12 1 Y 1 A LYS 434 ? CD ? A LYS 139 CD 13 1 Y 1 A LYS 434 ? CE ? A LYS 139 CE 14 1 Y 1 A LYS 434 ? NZ ? A LYS 139 NZ 15 1 Y 1 A ARG 459 ? NE ? A ARG 164 NE 16 1 Y 1 A ARG 459 ? CZ ? A ARG 164 CZ 17 1 Y 1 A ARG 459 ? NH1 ? A ARG 164 NH1 18 1 Y 1 A ARG 459 ? NH2 ? A ARG 164 NH2 19 1 Y 1 A LYS 498 ? CG ? A LYS 203 CG 20 1 Y 1 A LYS 498 ? CD ? A LYS 203 CD 21 1 Y 1 A LYS 498 ? CE ? A LYS 203 CE 22 1 Y 1 A LYS 498 ? NZ ? A LYS 203 NZ 23 1 Y 1 A ARG 512 ? CG ? A ARG 217 CG 24 1 Y 1 A ARG 512 ? CD ? A ARG 217 CD 25 1 Y 1 A ARG 512 ? NE ? A ARG 217 NE 26 1 Y 1 A ARG 512 ? CZ ? A ARG 217 CZ 27 1 Y 1 A ARG 512 ? NH1 ? A ARG 217 NH1 28 1 Y 1 A ARG 512 ? NH2 ? A ARG 217 NH2 29 1 Y 1 A GLN 516 ? CG ? A GLN 221 CG 30 1 Y 1 A GLN 516 ? CD ? A GLN 221 CD 31 1 Y 1 A GLN 516 ? OE1 ? A GLN 221 OE1 32 1 Y 1 A GLN 516 ? NE2 ? A GLN 221 NE2 33 1 Y 1 A GLU 520 ? CG ? A GLU 225 CG 34 1 Y 1 A GLU 520 ? CD ? A GLU 225 CD 35 1 Y 1 A GLU 520 ? OE1 ? A GLU 225 OE1 36 1 Y 1 A GLU 520 ? OE2 ? A GLU 225 OE2 37 1 Y 1 A GLU 525 ? CG ? A GLU 230 CG 38 1 Y 1 A GLU 525 ? CD ? A GLU 230 CD 39 1 Y 1 A GLU 525 ? OE1 ? A GLU 230 OE1 40 1 Y 1 A GLU 525 ? OE2 ? A GLU 230 OE2 41 1 Y 1 A LYS 532 ? CG ? A LYS 237 CG 42 1 Y 1 A LYS 532 ? CD ? A LYS 237 CD 43 1 Y 1 A LYS 532 ? CE ? A LYS 237 CE 44 1 Y 1 A LYS 532 ? NZ ? A LYS 237 NZ 45 1 Y 1 A LYS 548 ? CG ? A LYS 253 CG 46 1 Y 1 A LYS 548 ? CD ? A LYS 253 CD 47 1 Y 1 A LYS 548 ? CE ? A LYS 253 CE 48 1 Y 1 A LYS 548 ? NZ ? A LYS 253 NZ 49 1 Y 1 A LYS 549 ? CG ? A LYS 254 CG 50 1 Y 1 A LYS 549 ? CD ? A LYS 254 CD 51 1 Y 1 A LYS 549 ? CE ? A LYS 254 CE 52 1 Y 1 A LYS 549 ? NZ ? A LYS 254 NZ 53 1 Y 1 A LYS 551 ? CG ? A LYS 256 CG 54 1 Y 1 A LYS 551 ? CD ? A LYS 256 CD 55 1 Y 1 A LYS 551 ? CE ? A LYS 256 CE 56 1 Y 1 A LYS 551 ? NZ ? A LYS 256 NZ 57 1 Y 1 A THR 552 ? OG1 ? A THR 257 OG1 58 1 Y 1 A THR 552 ? CG2 ? A THR 257 CG2 59 1 Y 1 A GLN 579 ? CG ? A GLN 284 CG 60 1 Y 1 A GLN 579 ? CD ? A GLN 284 CD 61 1 Y 1 A GLN 579 ? OE1 ? A GLN 284 OE1 62 1 Y 1 A GLN 579 ? NE2 ? A GLN 284 NE2 63 1 Y 1 A LYS 593 ? CG ? A LYS 298 CG 64 1 Y 1 A LYS 593 ? CD ? A LYS 298 CD 65 1 Y 1 A LYS 593 ? CE ? A LYS 298 CE 66 1 Y 1 A LYS 593 ? NZ ? A LYS 298 NZ 67 1 Y 1 A LYS 600 ? CG ? A LYS 305 CG 68 1 Y 1 A LYS 600 ? CD ? A LYS 305 CD 69 1 Y 1 A LYS 600 ? CE ? A LYS 305 CE 70 1 Y 1 A LYS 600 ? NZ ? A LYS 305 NZ 71 1 Y 1 A TYR 719 ? CG ? A TYR 424 CG 72 1 Y 1 A TYR 719 ? CD1 ? A TYR 424 CD1 73 1 Y 1 A TYR 719 ? CD2 ? A TYR 424 CD2 74 1 Y 1 A TYR 719 ? CE1 ? A TYR 424 CE1 75 1 Y 1 A TYR 719 ? CE2 ? A TYR 424 CE2 76 1 Y 1 A TYR 719 ? CZ ? A TYR 424 CZ 77 1 Y 1 A TYR 719 ? OH ? A TYR 424 OH 78 1 Y 1 A ARG 729 ? CG ? A ARG 434 CG 79 1 Y 1 A ARG 729 ? CD ? A ARG 434 CD 80 1 Y 1 A ARG 729 ? NE ? A ARG 434 NE 81 1 Y 1 A ARG 729 ? CZ ? A ARG 434 CZ 82 1 Y 1 A ARG 729 ? NH1 ? A ARG 434 NH1 83 1 Y 1 A ARG 729 ? NH2 ? A ARG 434 NH2 84 1 Y 1 A LYS 730 ? CG ? A LYS 435 CG 85 1 Y 1 A LYS 730 ? CD ? A LYS 435 CD 86 1 Y 1 A LYS 730 ? CE ? A LYS 435 CE 87 1 Y 1 A LYS 730 ? NZ ? A LYS 435 NZ 88 1 Y 1 A GLU 737 ? CD ? A GLU 442 CD 89 1 Y 1 A GLU 737 ? OE1 ? A GLU 442 OE1 90 1 Y 1 A GLU 737 ? OE2 ? A GLU 442 OE2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CU1 CU CU N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 EDN NAA N N N 232 EDN CAB C N N 233 EDN CAC C N N 234 EDN NAD N N N 235 EDN HAA1 H N N 236 EDN HAA2 H N N 237 EDN HAB1 H N N 238 EDN HAB2 H N N 239 EDN HAC1 H N N 240 EDN HAC2 H N N 241 EDN HAD1 H N N 242 EDN HAD2 H N N 243 GLC C1 C N S 244 GLC C2 C N R 245 GLC C3 C N S 246 GLC C4 C N S 247 GLC C5 C N R 248 GLC C6 C N N 249 GLC O1 O N N 250 GLC O2 O N N 251 GLC O3 O N N 252 GLC O4 O N N 253 GLC O5 O N N 254 GLC O6 O N N 255 GLC H1 H N N 256 GLC H2 H N N 257 GLC H3 H N N 258 GLC H4 H N N 259 GLC H5 H N N 260 GLC H61 H N N 261 GLC H62 H N N 262 GLC HO1 H N N 263 GLC HO2 H N N 264 GLC HO3 H N N 265 GLC HO4 H N N 266 GLC HO6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 HIS N N N N 317 HIS CA C N S 318 HIS C C N N 319 HIS O O N N 320 HIS CB C N N 321 HIS CG C Y N 322 HIS ND1 N Y N 323 HIS CD2 C Y N 324 HIS CE1 C Y N 325 HIS NE2 N Y N 326 HIS OXT O N N 327 HIS H H N N 328 HIS H2 H N N 329 HIS HA H N N 330 HIS HB2 H N N 331 HIS HB3 H N N 332 HIS HD1 H N N 333 HIS HD2 H N N 334 HIS HE1 H N N 335 HIS HE2 H N N 336 HIS HXT H N N 337 HOH O O N N 338 HOH H1 H N N 339 HOH H2 H N N 340 ILE N N N N 341 ILE CA C N S 342 ILE C C N N 343 ILE O O N N 344 ILE CB C N S 345 ILE CG1 C N N 346 ILE CG2 C N N 347 ILE CD1 C N N 348 ILE OXT O N N 349 ILE H H N N 350 ILE H2 H N N 351 ILE HA H N N 352 ILE HB H N N 353 ILE HG12 H N N 354 ILE HG13 H N N 355 ILE HG21 H N N 356 ILE HG22 H N N 357 ILE HG23 H N N 358 ILE HD11 H N N 359 ILE HD12 H N N 360 ILE HD13 H N N 361 ILE HXT H N N 362 LEU N N N N 363 LEU CA C N S 364 LEU C C N N 365 LEU O O N N 366 LEU CB C N N 367 LEU CG C N N 368 LEU CD1 C N N 369 LEU CD2 C N N 370 LEU OXT O N N 371 LEU H H N N 372 LEU H2 H N N 373 LEU HA H N N 374 LEU HB2 H N N 375 LEU HB3 H N N 376 LEU HG H N N 377 LEU HD11 H N N 378 LEU HD12 H N N 379 LEU HD13 H N N 380 LEU HD21 H N N 381 LEU HD22 H N N 382 LEU HD23 H N N 383 LEU HXT H N N 384 LYS N N N N 385 LYS CA C N S 386 LYS C C N N 387 LYS O O N N 388 LYS CB C N N 389 LYS CG C N N 390 LYS CD C N N 391 LYS CE C N N 392 LYS NZ N N N 393 LYS OXT O N N 394 LYS H H N N 395 LYS H2 H N N 396 LYS HA H N N 397 LYS HB2 H N N 398 LYS HB3 H N N 399 LYS HG2 H N N 400 LYS HG3 H N N 401 LYS HD2 H N N 402 LYS HD3 H N N 403 LYS HE2 H N N 404 LYS HE3 H N N 405 LYS HZ1 H N N 406 LYS HZ2 H N N 407 LYS HZ3 H N N 408 LYS HXT H N N 409 MET N N N N 410 MET CA C N S 411 MET C C N N 412 MET O O N N 413 MET CB C N N 414 MET CG C N N 415 MET SD S N N 416 MET CE C N N 417 MET OXT O N N 418 MET H H N N 419 MET H2 H N N 420 MET HA H N N 421 MET HB2 H N N 422 MET HB3 H N N 423 MET HG2 H N N 424 MET HG3 H N N 425 MET HE1 H N N 426 MET HE2 H N N 427 MET HE3 H N N 428 MET HXT H N N 429 MRD C1 C N N 430 MRD C2 C N N 431 MRD O2 O N N 432 MRD CM C N N 433 MRD C3 C N N 434 MRD C4 C N R 435 MRD O4 O N N 436 MRD C5 C N N 437 MRD H1C1 H N N 438 MRD H1C2 H N N 439 MRD H1C3 H N N 440 MRD H2 H N N 441 MRD HMC1 H N N 442 MRD HMC2 H N N 443 MRD HMC3 H N N 444 MRD H3C1 H N N 445 MRD H3C2 H N N 446 MRD H4 H N N 447 MRD HA H N N 448 MRD H5C1 H N N 449 MRD H5C2 H N N 450 MRD H5C3 H N N 451 PHE N N N N 452 PHE CA C N S 453 PHE C C N N 454 PHE O O N N 455 PHE CB C N N 456 PHE CG C Y N 457 PHE CD1 C Y N 458 PHE CD2 C Y N 459 PHE CE1 C Y N 460 PHE CE2 C Y N 461 PHE CZ C Y N 462 PHE OXT O N N 463 PHE H H N N 464 PHE H2 H N N 465 PHE HA H N N 466 PHE HB2 H N N 467 PHE HB3 H N N 468 PHE HD1 H N N 469 PHE HD2 H N N 470 PHE HE1 H N N 471 PHE HE2 H N N 472 PHE HZ H N N 473 PHE HXT H N N 474 PRO N N N N 475 PRO CA C N S 476 PRO C C N N 477 PRO O O N N 478 PRO CB C N N 479 PRO CG C N N 480 PRO CD C N N 481 PRO OXT O N N 482 PRO H H N N 483 PRO HA H N N 484 PRO HB2 H N N 485 PRO HB3 H N N 486 PRO HG2 H N N 487 PRO HG3 H N N 488 PRO HD2 H N N 489 PRO HD3 H N N 490 PRO HXT H N N 491 SAY P P N N 492 SAY O1P O N N 493 SAY O2P O N N 494 SAY O3P O N N 495 SAY "O5'" O N N 496 SAY "C5'" C N N 497 SAY "C4'" C N R 498 SAY "O4'" O N N 499 SAY "C3'" C N S 500 SAY "O3'" O N N 501 SAY "C2'" C N N 502 SAY "C1'" C N R 503 SAY CAA C Y N 504 SAY CAB C Y N 505 SAY CAF C Y N 506 SAY CAE C Y N 507 SAY CAD C Y N 508 SAY CAG C N N 509 SAY CAC C Y N 510 SAY OAR O N N 511 SAY OAH O N N 512 SAY H2P H N N 513 SAY H3P H N N 514 SAY "H5'1" H N N 515 SAY "H5'2" H N N 516 SAY "H4'" H N N 517 SAY "H3'" H N N 518 SAY "H1'" H N N 519 SAY HA H N N 520 SAY "H2'1" H N N 521 SAY "H2'2" H N N 522 SAY HAB H N N 523 SAY HAF H N N 524 SAY HAE H N N 525 SAY HAG H N N 526 SAY HAR H N N 527 SER N N N N 528 SER CA C N S 529 SER C C N N 530 SER O O N N 531 SER CB C N N 532 SER OG O N N 533 SER OXT O N N 534 SER H H N N 535 SER H2 H N N 536 SER HA H N N 537 SER HB2 H N N 538 SER HB3 H N N 539 SER HG H N N 540 SER HXT H N N 541 SO4 S S N N 542 SO4 O1 O N N 543 SO4 O2 O N N 544 SO4 O3 O N N 545 SO4 O4 O N N 546 THR N N N N 547 THR CA C N S 548 THR C C N N 549 THR O O N N 550 THR CB C N R 551 THR OG1 O N N 552 THR CG2 C N N 553 THR OXT O N N 554 THR H H N N 555 THR H2 H N N 556 THR HA H N N 557 THR HB H N N 558 THR HG1 H N N 559 THR HG21 H N N 560 THR HG22 H N N 561 THR HG23 H N N 562 THR HXT H N N 563 TRP N N N N 564 TRP CA C N S 565 TRP C C N N 566 TRP O O N N 567 TRP CB C N N 568 TRP CG C Y N 569 TRP CD1 C Y N 570 TRP CD2 C Y N 571 TRP NE1 N Y N 572 TRP CE2 C Y N 573 TRP CE3 C Y N 574 TRP CZ2 C Y N 575 TRP CZ3 C Y N 576 TRP CH2 C Y N 577 TRP OXT O N N 578 TRP H H N N 579 TRP H2 H N N 580 TRP HA H N N 581 TRP HB2 H N N 582 TRP HB3 H N N 583 TRP HD1 H N N 584 TRP HE1 H N N 585 TRP HE3 H N N 586 TRP HZ2 H N N 587 TRP HZ3 H N N 588 TRP HH2 H N N 589 TRP HXT H N N 590 TYR N N N N 591 TYR CA C N S 592 TYR C C N N 593 TYR O O N N 594 TYR CB C N N 595 TYR CG C Y N 596 TYR CD1 C Y N 597 TYR CD2 C Y N 598 TYR CE1 C Y N 599 TYR CE2 C Y N 600 TYR CZ C Y N 601 TYR OH O N N 602 TYR OXT O N N 603 TYR H H N N 604 TYR H2 H N N 605 TYR HA H N N 606 TYR HB2 H N N 607 TYR HB3 H N N 608 TYR HD1 H N N 609 TYR HD2 H N N 610 TYR HE1 H N N 611 TYR HE2 H N N 612 TYR HH H N N 613 TYR HXT H N N 614 VAL N N N N 615 VAL CA C N S 616 VAL C C N N 617 VAL O O N N 618 VAL CB C N N 619 VAL CG1 C N N 620 VAL CG2 C N N 621 VAL OXT O N N 622 VAL H H N N 623 VAL H2 H N N 624 VAL HA H N N 625 VAL HB H N N 626 VAL HG11 H N N 627 VAL HG12 H N N 628 VAL HG13 H N N 629 VAL HG21 H N N 630 VAL HG22 H N N 631 VAL HG23 H N N 632 VAL HXT H N N 633 Z9N O2 O N N 634 Z9N C1 C N N 635 Z9N O1 O N N 636 Z9N C2 C N S 637 Z9N O5 O N N 638 Z9N C3 C N S 639 Z9N O3 O N N 640 Z9N C4 C N S 641 Z9N O4 O N N 642 Z9N C5 C N R 643 Z9N C6 C N N 644 Z9N O6 O N N 645 Z9N HO2 H N N 646 Z9N H11 H N N 647 Z9N H12 H N N 648 Z9N HO1 H N N 649 Z9N H3 H N N 650 Z9N HO3 H N N 651 Z9N H4 H N N 652 Z9N HO4 H N N 653 Z9N H5 H N N 654 Z9N H61 H N N 655 Z9N H62 H N N 656 Z9N HO6 H N N 657 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDN NAA CAB sing N N 232 EDN CAB CAC sing N N 233 EDN CAC NAD sing N N 234 EDN NAA HAA1 sing N N 235 EDN NAA HAA2 sing N N 236 EDN CAB HAB1 sing N N 237 EDN CAB HAB2 sing N N 238 EDN CAC HAC1 sing N N 239 EDN CAC HAC2 sing N N 240 EDN NAD HAD1 sing N N 241 EDN NAD HAD2 sing N N 242 GLC C1 C2 sing N N 243 GLC C1 O1 sing N N 244 GLC C1 O5 sing N N 245 GLC C1 H1 sing N N 246 GLC C2 C3 sing N N 247 GLC C2 O2 sing N N 248 GLC C2 H2 sing N N 249 GLC C3 C4 sing N N 250 GLC C3 O3 sing N N 251 GLC C3 H3 sing N N 252 GLC C4 C5 sing N N 253 GLC C4 O4 sing N N 254 GLC C4 H4 sing N N 255 GLC C5 C6 sing N N 256 GLC C5 O5 sing N N 257 GLC C5 H5 sing N N 258 GLC C6 O6 sing N N 259 GLC C6 H61 sing N N 260 GLC C6 H62 sing N N 261 GLC O1 HO1 sing N N 262 GLC O2 HO2 sing N N 263 GLC O3 HO3 sing N N 264 GLC O4 HO4 sing N N 265 GLC O6 HO6 sing N N 266 GLN N CA sing N N 267 GLN N H sing N N 268 GLN N H2 sing N N 269 GLN CA C sing N N 270 GLN CA CB sing N N 271 GLN CA HA sing N N 272 GLN C O doub N N 273 GLN C OXT sing N N 274 GLN CB CG sing N N 275 GLN CB HB2 sing N N 276 GLN CB HB3 sing N N 277 GLN CG CD sing N N 278 GLN CG HG2 sing N N 279 GLN CG HG3 sing N N 280 GLN CD OE1 doub N N 281 GLN CD NE2 sing N N 282 GLN NE2 HE21 sing N N 283 GLN NE2 HE22 sing N N 284 GLN OXT HXT sing N N 285 GLU N CA sing N N 286 GLU N H sing N N 287 GLU N H2 sing N N 288 GLU CA C sing N N 289 GLU CA CB sing N N 290 GLU CA HA sing N N 291 GLU C O doub N N 292 GLU C OXT sing N N 293 GLU CB CG sing N N 294 GLU CB HB2 sing N N 295 GLU CB HB3 sing N N 296 GLU CG CD sing N N 297 GLU CG HG2 sing N N 298 GLU CG HG3 sing N N 299 GLU CD OE1 doub N N 300 GLU CD OE2 sing N N 301 GLU OE2 HE2 sing N N 302 GLU OXT HXT sing N N 303 GLY N CA sing N N 304 GLY N H sing N N 305 GLY N H2 sing N N 306 GLY CA C sing N N 307 GLY CA HA2 sing N N 308 GLY CA HA3 sing N N 309 GLY C O doub N N 310 GLY C OXT sing N N 311 GLY OXT HXT sing N N 312 HIS N CA sing N N 313 HIS N H sing N N 314 HIS N H2 sing N N 315 HIS CA C sing N N 316 HIS CA CB sing N N 317 HIS CA HA sing N N 318 HIS C O doub N N 319 HIS C OXT sing N N 320 HIS CB CG sing N N 321 HIS CB HB2 sing N N 322 HIS CB HB3 sing N N 323 HIS CG ND1 sing Y N 324 HIS CG CD2 doub Y N 325 HIS ND1 CE1 doub Y N 326 HIS ND1 HD1 sing N N 327 HIS CD2 NE2 sing Y N 328 HIS CD2 HD2 sing N N 329 HIS CE1 NE2 sing Y N 330 HIS CE1 HE1 sing N N 331 HIS NE2 HE2 sing N N 332 HIS OXT HXT sing N N 333 HOH O H1 sing N N 334 HOH O H2 sing N N 335 ILE N CA sing N N 336 ILE N H sing N N 337 ILE N H2 sing N N 338 ILE CA C sing N N 339 ILE CA CB sing N N 340 ILE CA HA sing N N 341 ILE C O doub N N 342 ILE C OXT sing N N 343 ILE CB CG1 sing N N 344 ILE CB CG2 sing N N 345 ILE CB HB sing N N 346 ILE CG1 CD1 sing N N 347 ILE CG1 HG12 sing N N 348 ILE CG1 HG13 sing N N 349 ILE CG2 HG21 sing N N 350 ILE CG2 HG22 sing N N 351 ILE CG2 HG23 sing N N 352 ILE CD1 HD11 sing N N 353 ILE CD1 HD12 sing N N 354 ILE CD1 HD13 sing N N 355 ILE OXT HXT sing N N 356 LEU N CA sing N N 357 LEU N H sing N N 358 LEU N H2 sing N N 359 LEU CA C sing N N 360 LEU CA CB sing N N 361 LEU CA HA sing N N 362 LEU C O doub N N 363 LEU C OXT sing N N 364 LEU CB CG sing N N 365 LEU CB HB2 sing N N 366 LEU CB HB3 sing N N 367 LEU CG CD1 sing N N 368 LEU CG CD2 sing N N 369 LEU CG HG sing N N 370 LEU CD1 HD11 sing N N 371 LEU CD1 HD12 sing N N 372 LEU CD1 HD13 sing N N 373 LEU CD2 HD21 sing N N 374 LEU CD2 HD22 sing N N 375 LEU CD2 HD23 sing N N 376 LEU OXT HXT sing N N 377 LYS N CA sing N N 378 LYS N H sing N N 379 LYS N H2 sing N N 380 LYS CA C sing N N 381 LYS CA CB sing N N 382 LYS CA HA sing N N 383 LYS C O doub N N 384 LYS C OXT sing N N 385 LYS CB CG sing N N 386 LYS CB HB2 sing N N 387 LYS CB HB3 sing N N 388 LYS CG CD sing N N 389 LYS CG HG2 sing N N 390 LYS CG HG3 sing N N 391 LYS CD CE sing N N 392 LYS CD HD2 sing N N 393 LYS CD HD3 sing N N 394 LYS CE NZ sing N N 395 LYS CE HE2 sing N N 396 LYS CE HE3 sing N N 397 LYS NZ HZ1 sing N N 398 LYS NZ HZ2 sing N N 399 LYS NZ HZ3 sing N N 400 LYS OXT HXT sing N N 401 MET N CA sing N N 402 MET N H sing N N 403 MET N H2 sing N N 404 MET CA C sing N N 405 MET CA CB sing N N 406 MET CA HA sing N N 407 MET C O doub N N 408 MET C OXT sing N N 409 MET CB CG sing N N 410 MET CB HB2 sing N N 411 MET CB HB3 sing N N 412 MET CG SD sing N N 413 MET CG HG2 sing N N 414 MET CG HG3 sing N N 415 MET SD CE sing N N 416 MET CE HE1 sing N N 417 MET CE HE2 sing N N 418 MET CE HE3 sing N N 419 MET OXT HXT sing N N 420 MRD C1 C2 sing N N 421 MRD C1 H1C1 sing N N 422 MRD C1 H1C2 sing N N 423 MRD C1 H1C3 sing N N 424 MRD C2 O2 sing N N 425 MRD C2 CM sing N N 426 MRD C2 C3 sing N N 427 MRD O2 H2 sing N N 428 MRD CM HMC1 sing N N 429 MRD CM HMC2 sing N N 430 MRD CM HMC3 sing N N 431 MRD C3 C4 sing N N 432 MRD C3 H3C1 sing N N 433 MRD C3 H3C2 sing N N 434 MRD C4 O4 sing N N 435 MRD C4 C5 sing N N 436 MRD C4 H4 sing N N 437 MRD O4 HA sing N N 438 MRD C5 H5C1 sing N N 439 MRD C5 H5C2 sing N N 440 MRD C5 H5C3 sing N N 441 PHE N CA sing N N 442 PHE N H sing N N 443 PHE N H2 sing N N 444 PHE CA C sing N N 445 PHE CA CB sing N N 446 PHE CA HA sing N N 447 PHE C O doub N N 448 PHE C OXT sing N N 449 PHE CB CG sing N N 450 PHE CB HB2 sing N N 451 PHE CB HB3 sing N N 452 PHE CG CD1 doub Y N 453 PHE CG CD2 sing Y N 454 PHE CD1 CE1 sing Y N 455 PHE CD1 HD1 sing N N 456 PHE CD2 CE2 doub Y N 457 PHE CD2 HD2 sing N N 458 PHE CE1 CZ doub Y N 459 PHE CE1 HE1 sing N N 460 PHE CE2 CZ sing Y N 461 PHE CE2 HE2 sing N N 462 PHE CZ HZ sing N N 463 PHE OXT HXT sing N N 464 PRO N CA sing N N 465 PRO N CD sing N N 466 PRO N H sing N N 467 PRO CA C sing N N 468 PRO CA CB sing N N 469 PRO CA HA sing N N 470 PRO C O doub N N 471 PRO C OXT sing N N 472 PRO CB CG sing N N 473 PRO CB HB2 sing N N 474 PRO CB HB3 sing N N 475 PRO CG CD sing N N 476 PRO CG HG2 sing N N 477 PRO CG HG3 sing N N 478 PRO CD HD2 sing N N 479 PRO CD HD3 sing N N 480 PRO OXT HXT sing N N 481 SAY P O1P doub N N 482 SAY P O2P sing N N 483 SAY P "O5'" sing N N 484 SAY P O3P sing N N 485 SAY "O5'" "C5'" sing N N 486 SAY "C5'" "C4'" sing N N 487 SAY "C4'" "O4'" sing N N 488 SAY "C4'" "C3'" sing N N 489 SAY "O4'" "C1'" sing N N 490 SAY "C3'" "O3'" sing N N 491 SAY "C3'" "C2'" sing N N 492 SAY "C2'" "C1'" sing N N 493 SAY "C1'" CAA sing N N 494 SAY CAA CAB sing Y N 495 SAY CAA CAF doub Y N 496 SAY CAB CAC doub Y N 497 SAY CAF CAE sing Y N 498 SAY CAE CAD doub Y N 499 SAY CAD CAG sing N N 500 SAY CAG OAH doub N N 501 SAY CAD CAC sing Y N 502 SAY CAC OAR sing N N 503 SAY O2P H2P sing N N 504 SAY O3P H3P sing N N 505 SAY "C5'" "H5'1" sing N N 506 SAY "C5'" "H5'2" sing N N 507 SAY "C4'" "H4'" sing N N 508 SAY "C3'" "H3'" sing N N 509 SAY "C1'" "H1'" sing N N 510 SAY "O3'" HA sing N N 511 SAY "C2'" "H2'1" sing N N 512 SAY "C2'" "H2'2" sing N N 513 SAY CAB HAB sing N N 514 SAY CAF HAF sing N N 515 SAY CAE HAE sing N N 516 SAY CAG HAG sing N N 517 SAY OAR HAR sing N N 518 SER N CA sing N N 519 SER N H sing N N 520 SER N H2 sing N N 521 SER CA C sing N N 522 SER CA CB sing N N 523 SER CA HA sing N N 524 SER C O doub N N 525 SER C OXT sing N N 526 SER CB OG sing N N 527 SER CB HB2 sing N N 528 SER CB HB3 sing N N 529 SER OG HG sing N N 530 SER OXT HXT sing N N 531 SO4 S O1 doub N N 532 SO4 S O2 doub N N 533 SO4 S O3 sing N N 534 SO4 S O4 sing N N 535 THR N CA sing N N 536 THR N H sing N N 537 THR N H2 sing N N 538 THR CA C sing N N 539 THR CA CB sing N N 540 THR CA HA sing N N 541 THR C O doub N N 542 THR C OXT sing N N 543 THR CB OG1 sing N N 544 THR CB CG2 sing N N 545 THR CB HB sing N N 546 THR OG1 HG1 sing N N 547 THR CG2 HG21 sing N N 548 THR CG2 HG22 sing N N 549 THR CG2 HG23 sing N N 550 THR OXT HXT sing N N 551 TRP N CA sing N N 552 TRP N H sing N N 553 TRP N H2 sing N N 554 TRP CA C sing N N 555 TRP CA CB sing N N 556 TRP CA HA sing N N 557 TRP C O doub N N 558 TRP C OXT sing N N 559 TRP CB CG sing N N 560 TRP CB HB2 sing N N 561 TRP CB HB3 sing N N 562 TRP CG CD1 doub Y N 563 TRP CG CD2 sing Y N 564 TRP CD1 NE1 sing Y N 565 TRP CD1 HD1 sing N N 566 TRP CD2 CE2 doub Y N 567 TRP CD2 CE3 sing Y N 568 TRP NE1 CE2 sing Y N 569 TRP NE1 HE1 sing N N 570 TRP CE2 CZ2 sing Y N 571 TRP CE3 CZ3 doub Y N 572 TRP CE3 HE3 sing N N 573 TRP CZ2 CH2 doub Y N 574 TRP CZ2 HZ2 sing N N 575 TRP CZ3 CH2 sing Y N 576 TRP CZ3 HZ3 sing N N 577 TRP CH2 HH2 sing N N 578 TRP OXT HXT sing N N 579 TYR N CA sing N N 580 TYR N H sing N N 581 TYR N H2 sing N N 582 TYR CA C sing N N 583 TYR CA CB sing N N 584 TYR CA HA sing N N 585 TYR C O doub N N 586 TYR C OXT sing N N 587 TYR CB CG sing N N 588 TYR CB HB2 sing N N 589 TYR CB HB3 sing N N 590 TYR CG CD1 doub Y N 591 TYR CG CD2 sing Y N 592 TYR CD1 CE1 sing Y N 593 TYR CD1 HD1 sing N N 594 TYR CD2 CE2 doub Y N 595 TYR CD2 HD2 sing N N 596 TYR CE1 CZ doub Y N 597 TYR CE1 HE1 sing N N 598 TYR CE2 CZ sing Y N 599 TYR CE2 HE2 sing N N 600 TYR CZ OH sing N N 601 TYR OH HH sing N N 602 TYR OXT HXT sing N N 603 VAL N CA sing N N 604 VAL N H sing N N 605 VAL N H2 sing N N 606 VAL CA C sing N N 607 VAL CA CB sing N N 608 VAL CA HA sing N N 609 VAL C O doub N N 610 VAL C OXT sing N N 611 VAL CB CG1 sing N N 612 VAL CB CG2 sing N N 613 VAL CB HB sing N N 614 VAL CG1 HG11 sing N N 615 VAL CG1 HG12 sing N N 616 VAL CG1 HG13 sing N N 617 VAL CG2 HG21 sing N N 618 VAL CG2 HG22 sing N N 619 VAL CG2 HG23 sing N N 620 VAL OXT HXT sing N N 621 Z9N O2 C2 sing N N 622 Z9N C1 O1 sing N N 623 Z9N C1 C2 sing N N 624 Z9N C2 O5 sing N N 625 Z9N C2 C3 sing N N 626 Z9N O5 C5 sing N N 627 Z9N C3 O3 sing N N 628 Z9N C3 C4 sing N N 629 Z9N C4 O4 sing N N 630 Z9N C4 C5 sing N N 631 Z9N C5 C6 sing N N 632 Z9N C6 O6 sing N N 633 Z9N C1 H11 sing N N 634 Z9N C1 H12 sing N N 635 Z9N O1 HO1 sing N N 636 Z9N C3 H3 sing N N 637 Z9N O3 HO3 sing N N 638 Z9N C4 H4 sing N N 639 Z9N O4 HO4 sing N N 640 Z9N C5 H5 sing N N 641 Z9N C6 H61 sing N N 642 Z9N C6 H62 sing N N 643 Z9N O6 HO6 sing N N 644 Z9N HO2 O2 sing N N 645 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2XY5 'double helix' 2XY5 'a-form double helix' 2XY5 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 10 1_555 -0.430 -0.254 0.145 5.974 -4.364 -6.379 1 B_DG20:DC13_C B 20 ? C 13 ? 19 1 1 B DA 2 1_555 C DT 9 1_555 0.056 0.000 -0.152 -4.090 -11.123 -0.095 2 B_DA21:DT12_C B 21 ? C 12 ? 20 1 1 B DC 3 1_555 C DG 8 1_555 -0.118 -0.234 -0.374 1.372 -9.755 3.488 3 B_DC22:DG11_C B 22 ? C 11 ? 19 1 1 B DC 4 1_555 C DG 7 1_555 0.411 -0.332 -0.340 0.289 -13.353 1.559 4 B_DC23:DG10_C B 23 ? C 10 ? 19 1 1 B DT 6 1_555 C DA 5 1_555 -0.098 -0.305 -0.421 -1.356 -1.159 0.481 5 B_DT25:DA8_C B 25 ? C 8 ? 20 1 1 B DC 7 1_555 C DG 4 1_555 0.209 -0.180 -0.643 7.116 4.360 -1.125 6 B_DC26:DG7_C B 26 ? C 7 ? 19 1 1 B DC 8 1_555 C DG 3 1_555 0.171 -0.239 -0.152 10.155 -9.330 0.147 7 B_DC27:DG6_C B 27 ? C 6 ? 19 1 1 B DC 9 1_555 C DG 2 1_555 0.223 -0.079 -0.083 10.409 -3.290 2.500 8 B_DC28:DG5_C B 28 ? C 5 ? 19 1 1 B DT 10 1_555 C DA 1 1_555 -0.019 -0.056 -0.479 23.466 -3.231 4.117 9 B_DT29:DA4_C B 29 ? C 4 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 10 1_555 B DA 2 1_555 C DT 9 1_555 -0.144 -0.001 3.679 -1.503 1.658 36.226 -0.263 -0.005 3.678 2.664 2.415 36.293 1 BB_DG20DA21:DT12DC13_CC B 20 ? C 13 ? B 21 ? C 12 ? 1 B DA 2 1_555 C DT 9 1_555 B DC 3 1_555 C DG 8 1_555 -0.022 -0.529 3.131 1.443 2.429 29.915 -1.493 0.323 3.075 4.692 -2.788 30.045 2 BB_DA21DC22:DG11DT12_CC B 21 ? C 12 ? B 22 ? C 11 ? 1 B DC 3 1_555 C DG 8 1_555 B DC 4 1_555 C DG 7 1_555 0.436 0.120 3.199 1.057 6.391 40.246 -0.521 -0.512 3.190 9.215 -1.524 40.742 3 BB_DC22DC23:DG10DG11_CC B 22 ? C 11 ? B 23 ? C 10 ? 1 B DC 4 1_555 C DG 7 1_555 B DT 6 1_555 C DA 5 1_555 0.390 0.224 7.007 4.598 5.768 59.252 -0.396 0.103 7.010 5.810 -4.631 59.668 4 BB_DC23DT25:DA8DG10_CC B 23 ? C 10 ? B 25 ? C 8 ? 1 B DT 6 1_555 C DA 5 1_555 B DC 7 1_555 C DG 4 1_555 0.459 -0.326 3.232 4.142 11.251 27.976 -2.839 -0.060 2.923 22.036 -8.113 30.390 5 BB_DT25DC26:DG7DA8_CC B 25 ? C 8 ? B 26 ? C 7 ? 1 B DC 7 1_555 C DG 4 1_555 B DC 8 1_555 C DG 3 1_555 -0.135 -0.461 3.415 -9.614 8.950 37.608 -1.756 -0.960 3.168 13.393 14.386 39.757 6 BB_DC26DC27:DG6DG7_CC B 26 ? C 7 ? B 27 ? C 6 ? 1 B DC 8 1_555 C DG 3 1_555 B DC 9 1_555 C DG 2 1_555 -0.505 -1.921 3.498 -3.077 10.390 24.042 -6.894 0.317 2.509 23.476 6.952 26.338 7 BB_DC27DC28:DG5DG6_CC B 27 ? C 6 ? B 28 ? C 5 ? 1 B DC 9 1_555 C DG 2 1_555 B DT 10 1_555 C DA 1 1_555 -0.156 -1.296 3.086 1.510 8.305 28.935 -4.003 0.575 2.610 16.191 -2.944 30.116 8 BB_DC28DT29:DA4DG5_CC B 28 ? C 5 ? B 29 ? C 4 ? # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 GLC 1 D GLC 1 A SWE 1882 n D 4 Z9N 2 D Z9N 2 A SWE 1882 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc Z9N 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufa Z9N 'COMMON NAME' GMML 1.0 a-D-fructofuranose Z9N 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Fruf Z9N 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DFrufa2-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/2,2,1/[ha122h-2a_2-5][a2122h-1a_1-5]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 3 4 '[][a-D-Fruf]{[(2+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 Z9N _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 GLC 1 n 4 Z9N 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'SULFATE ION' SO4 6 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 7 'COPPER (I) ION' CU1 8 ETHANE-1,2-DIAMINE EDN 9 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1U45 _pdbx_initial_refinement_model.details 'PDB ENTRY 1U45' #