data_2Y38 # _entry.id 2Y38 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2Y38 WWPDB D_1290046788 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Y38 _pdbx_database_status.recvd_initial_deposition_date 2010-12-19 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hussain, S.A.' 1 'Carafoli, F.' 2 'Hohenester, E.' 3 # _citation.id primary _citation.title 'Determinants of Laminin Polymerisation Revealed by the Crystal Structure of the Alpha5 Chain Amino-Terminal Region' _citation.journal_abbrev 'Embo Rep.' _citation.journal_volume 12 _citation.page_first 276 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1469-221X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21311558 _citation.pdbx_database_id_DOI 10.1038/EMBOR.2011.3 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hussain, S.A.' 1 ? primary 'Carafoli, F.' 2 ? primary 'Hohenester, E.' 3 ? # _cell.entry_id 2Y38 _cell.length_a 116.400 _cell.length_b 116.400 _cell.length_c 112.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Y38 _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'LAMININ SUBUNIT ALPHA-5' 44755.855 1 ? YES 'LN-LEA1-2 DOMAINS, RESIDUES 44-433' ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LAMININ-10 SUBUNIT ALPHA, LAMININ-11 SUBUNIT ALPHA, LAMININ-15 SUBUNIT ALPHA, LAMININ ALPHA5 CHAIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APLAGGDGFSLHPPYFNLAEGARITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPAQTIQGQYCDICTAANSNKA HPVSNAIDGTERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFANSPRPDLWVLERSTDFGHTYQPWQFFASSKRD CLERFGPRTLERITQDDDVICTTEYSRIVPLENGEIVVSLVNGRPGALNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLM GKALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSAN ECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPAAAHHH HHH ; _entity_poly.pdbx_seq_one_letter_code_can ;APLAGGDGFSLHPPYFNLAEGARITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPAQTIQGQYCDICTAANSNKA HPVSNAIDGTERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFANSPRPDLWVLERSTDFGHTYQPWQFFASSKRD CLERFGPRTLERITQDDDVICTTEYSRIVPLENGEIVVSLVNGRPGALNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLM GKALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSAN ECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPAAAHHH HHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 LEU n 1 4 ALA n 1 5 GLY n 1 6 GLY n 1 7 ASP n 1 8 GLY n 1 9 PHE n 1 10 SER n 1 11 LEU n 1 12 HIS n 1 13 PRO n 1 14 PRO n 1 15 TYR n 1 16 PHE n 1 17 ASN n 1 18 LEU n 1 19 ALA n 1 20 GLU n 1 21 GLY n 1 22 ALA n 1 23 ARG n 1 24 ILE n 1 25 THR n 1 26 ALA n 1 27 SER n 1 28 ALA n 1 29 THR n 1 30 CYS n 1 31 GLY n 1 32 GLU n 1 33 GLU n 1 34 ALA n 1 35 PRO n 1 36 THR n 1 37 ARG n 1 38 SER n 1 39 VAL n 1 40 SER n 1 41 ARG n 1 42 PRO n 1 43 THR n 1 44 GLU n 1 45 ASP n 1 46 LEU n 1 47 TYR n 1 48 CYS n 1 49 LYS n 1 50 LEU n 1 51 VAL n 1 52 GLY n 1 53 GLY n 1 54 PRO n 1 55 VAL n 1 56 ALA n 1 57 GLY n 1 58 GLY n 1 59 ASP n 1 60 PRO n 1 61 ALA n 1 62 GLN n 1 63 THR n 1 64 ILE n 1 65 GLN n 1 66 GLY n 1 67 GLN n 1 68 TYR n 1 69 CYS n 1 70 ASP n 1 71 ILE n 1 72 CYS n 1 73 THR n 1 74 ALA n 1 75 ALA n 1 76 ASN n 1 77 SER n 1 78 ASN n 1 79 LYS n 1 80 ALA n 1 81 HIS n 1 82 PRO n 1 83 VAL n 1 84 SER n 1 85 ASN n 1 86 ALA n 1 87 ILE n 1 88 ASP n 1 89 GLY n 1 90 THR n 1 91 GLU n 1 92 ARG n 1 93 TRP n 1 94 TRP n 1 95 GLN n 1 96 SER n 1 97 PRO n 1 98 PRO n 1 99 LEU n 1 100 SER n 1 101 ARG n 1 102 GLY n 1 103 LEU n 1 104 GLU n 1 105 TYR n 1 106 ASN n 1 107 GLU n 1 108 VAL n 1 109 ASN n 1 110 VAL n 1 111 THR n 1 112 LEU n 1 113 ASP n 1 114 LEU n 1 115 GLY n 1 116 GLN n 1 117 VAL n 1 118 PHE n 1 119 HIS n 1 120 VAL n 1 121 ALA n 1 122 TYR n 1 123 VAL n 1 124 LEU n 1 125 ILE n 1 126 LYS n 1 127 PHE n 1 128 ALA n 1 129 ASN n 1 130 SER n 1 131 PRO n 1 132 ARG n 1 133 PRO n 1 134 ASP n 1 135 LEU n 1 136 TRP n 1 137 VAL n 1 138 LEU n 1 139 GLU n 1 140 ARG n 1 141 SER n 1 142 THR n 1 143 ASP n 1 144 PHE n 1 145 GLY n 1 146 HIS n 1 147 THR n 1 148 TYR n 1 149 GLN n 1 150 PRO n 1 151 TRP n 1 152 GLN n 1 153 PHE n 1 154 PHE n 1 155 ALA n 1 156 SER n 1 157 SER n 1 158 LYS n 1 159 ARG n 1 160 ASP n 1 161 CYS n 1 162 LEU n 1 163 GLU n 1 164 ARG n 1 165 PHE n 1 166 GLY n 1 167 PRO n 1 168 ARG n 1 169 THR n 1 170 LEU n 1 171 GLU n 1 172 ARG n 1 173 ILE n 1 174 THR n 1 175 GLN n 1 176 ASP n 1 177 ASP n 1 178 ASP n 1 179 VAL n 1 180 ILE n 1 181 CYS n 1 182 THR n 1 183 THR n 1 184 GLU n 1 185 TYR n 1 186 SER n 1 187 ARG n 1 188 ILE n 1 189 VAL n 1 190 PRO n 1 191 LEU n 1 192 GLU n 1 193 ASN n 1 194 GLY n 1 195 GLU n 1 196 ILE n 1 197 VAL n 1 198 VAL n 1 199 SER n 1 200 LEU n 1 201 VAL n 1 202 ASN n 1 203 GLY n 1 204 ARG n 1 205 PRO n 1 206 GLY n 1 207 ALA n 1 208 LEU n 1 209 ASN n 1 210 PHE n 1 211 SER n 1 212 TYR n 1 213 SER n 1 214 PRO n 1 215 LEU n 1 216 LEU n 1 217 ARG n 1 218 ASP n 1 219 PHE n 1 220 THR n 1 221 LYS n 1 222 ALA n 1 223 THR n 1 224 ASN n 1 225 ILE n 1 226 ARG n 1 227 LEU n 1 228 ARG n 1 229 PHE n 1 230 LEU n 1 231 ARG n 1 232 THR n 1 233 ASN n 1 234 THR n 1 235 LEU n 1 236 LEU n 1 237 GLY n 1 238 HIS n 1 239 LEU n 1 240 MET n 1 241 GLY n 1 242 LYS n 1 243 ALA n 1 244 LEU n 1 245 ARG n 1 246 ASP n 1 247 PRO n 1 248 THR n 1 249 VAL n 1 250 THR n 1 251 ARG n 1 252 ARG n 1 253 TYR n 1 254 TYR n 1 255 TYR n 1 256 SER n 1 257 ILE n 1 258 LYS n 1 259 ASP n 1 260 ILE n 1 261 SER n 1 262 ILE n 1 263 GLY n 1 264 GLY n 1 265 ARG n 1 266 CYS n 1 267 VAL n 1 268 CYS n 1 269 HIS n 1 270 GLY n 1 271 HIS n 1 272 ALA n 1 273 ASP n 1 274 VAL n 1 275 CYS n 1 276 ASP n 1 277 ALA n 1 278 LYS n 1 279 ASP n 1 280 PRO n 1 281 LEU n 1 282 ASP n 1 283 PRO n 1 284 PHE n 1 285 ARG n 1 286 LEU n 1 287 GLN n 1 288 CYS n 1 289 ALA n 1 290 CYS n 1 291 GLN n 1 292 HIS n 1 293 ASN n 1 294 THR n 1 295 CYS n 1 296 GLY n 1 297 GLY n 1 298 SER n 1 299 CYS n 1 300 ASP n 1 301 ARG n 1 302 CYS n 1 303 CYS n 1 304 PRO n 1 305 GLY n 1 306 PHE n 1 307 ASN n 1 308 GLN n 1 309 GLN n 1 310 PRO n 1 311 TRP n 1 312 LYS n 1 313 PRO n 1 314 ALA n 1 315 THR n 1 316 THR n 1 317 ASP n 1 318 SER n 1 319 ALA n 1 320 ASN n 1 321 GLU n 1 322 CYS n 1 323 GLN n 1 324 SER n 1 325 CYS n 1 326 ASN n 1 327 CYS n 1 328 HIS n 1 329 GLY n 1 330 HIS n 1 331 ALA n 1 332 TYR n 1 333 ASP n 1 334 CYS n 1 335 TYR n 1 336 TYR n 1 337 ASP n 1 338 PRO n 1 339 GLU n 1 340 VAL n 1 341 ASP n 1 342 ARG n 1 343 ARG n 1 344 GLU n 1 345 ALA n 1 346 SER n 1 347 GLN n 1 348 ASN n 1 349 GLN n 1 350 ASP n 1 351 ASN n 1 352 VAL n 1 353 TYR n 1 354 GLN n 1 355 GLY n 1 356 GLY n 1 357 GLY n 1 358 VAL n 1 359 CYS n 1 360 LEU n 1 361 ASP n 1 362 CYS n 1 363 GLN n 1 364 HIS n 1 365 HIS n 1 366 THR n 1 367 THR n 1 368 GLY n 1 369 ILE n 1 370 ASN n 1 371 CYS n 1 372 GLU n 1 373 ARG n 1 374 CYS n 1 375 LEU n 1 376 PRO n 1 377 GLY n 1 378 PHE n 1 379 PHE n 1 380 ARG n 1 381 ALA n 1 382 PRO n 1 383 ASP n 1 384 GLN n 1 385 PRO n 1 386 LEU n 1 387 ASP n 1 388 SER n 1 389 PRO n 1 390 HIS n 1 391 VAL n 1 392 CYS n 1 393 ARG n 1 394 PRO n 1 395 ALA n 1 396 ALA n 1 397 ALA n 1 398 HIS n 1 399 HIS n 1 400 HIS n 1 401 HIS n 1 402 HIS n 1 403 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'HOUSE MOUSE' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'MUS MUSCULUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name HUMAN _entity_src_gen.pdbx_host_org_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293-C18 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PCEP-PU _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LAMA5_MOUSE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q61001 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2Y38 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 394 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q61001 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 433 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 433 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2Y38 ALA A 1 ? UNP Q61001 ? ? 'cloning artifact' 40 1 1 2Y38 PRO A 2 ? UNP Q61001 ? ? 'cloning artifact' 41 2 1 2Y38 LEU A 3 ? UNP Q61001 ? ? 'cloning artifact' 42 3 1 2Y38 ALA A 4 ? UNP Q61001 ? ? 'cloning artifact' 43 4 1 2Y38 ALA A 61 ? UNP Q61001 ASN 100 'engineered mutation' 100 5 1 2Y38 GLU A 344 ? UNP Q61001 ASN 383 'engineered mutation' 383 6 1 2Y38 ALA A 395 ? UNP Q61001 ? ? 'expression tag' 434 7 1 2Y38 ALA A 396 ? UNP Q61001 ? ? 'expression tag' 435 8 1 2Y38 ALA A 397 ? UNP Q61001 ? ? 'expression tag' 436 9 1 2Y38 HIS A 398 ? UNP Q61001 ? ? 'expression tag' 437 10 1 2Y38 HIS A 399 ? UNP Q61001 ? ? 'expression tag' 438 11 1 2Y38 HIS A 400 ? UNP Q61001 ? ? 'expression tag' 439 12 1 2Y38 HIS A 401 ? UNP Q61001 ? ? 'expression tag' 440 13 1 2Y38 HIS A 402 ? UNP Q61001 ? ? 'expression tag' 441 14 1 2Y38 HIS A 403 ? UNP Q61001 ? ? 'expression tag' 442 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2Y38 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.91 _exptl_crystal.density_percent_sol 74.93 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_wavelength 0.980 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2Y38 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.00 _reflns.d_resolution_high 2.90 _reflns.number_obs 19173 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.14 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.0 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 3.06 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.68 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.10 _reflns_shell.pdbx_redundancy 11.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2Y38 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 19173 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 10000 _refine.pdbx_data_cutoff_low_absF 0 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.2538 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2538 _refine.ls_R_factor_R_free 0.2925 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 935 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 76.0 _refine.aniso_B[1][1] -14.961 _refine.aniso_B[2][2] -14.961 _refine.aniso_B[3][3] 29.922 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.3 _refine.solvent_model_param_bsol 38.7932 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2640 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 72 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2712 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.8 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM ? 'X-RAY DIFFRACTION' 2 CARBOHYDRATE.PARAM ? 'X-RAY DIFFRACTION' 3 ION.PARAM ? # _struct.entry_id 2Y38 _struct.title 'LAMININ ALPHA5 CHAIN N-TERMINAL FRAGMENT' _struct.pdbx_descriptor 'LAMININ SUBUNIT ALPHA-5' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Y38 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'STRUCTURAL PROTEIN, CELL ADHESION, BASEMENT MEMBRANE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 82 ? ALA A 86 ? PRO A 121 ALA A 125 5 ? 5 HELX_P HELX_P2 AA2 SER A 157 ? PHE A 165 ? SER A 196 PHE A 204 1 ? 9 HELX_P HELX_P3 AA3 ARG A 204 ? LEU A 208 ? ARG A 243 LEU A 247 5 ? 5 HELX_P HELX_P4 AA4 ASN A 209 ? TYR A 212 ? ASN A 248 TYR A 251 5 ? 4 HELX_P HELX_P5 AA5 SER A 213 ? THR A 220 ? SER A 252 THR A 259 1 ? 8 HELX_P HELX_P6 AA6 HIS A 238 ? ARG A 245 ? HIS A 277 ARG A 284 1 ? 8 HELX_P HELX_P7 AA7 VAL A 249 ? TYR A 253 ? VAL A 288 TYR A 292 5 ? 5 HELX_P HELX_P8 AA8 ASP A 337 ? ARG A 343 ? ASP A 376 ARG A 382 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 161 SG ? ? ? 1_555 A CYS 181 SG ? ? A CYS 200 A CYS 220 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf2 disulf ? ? A CYS 266 SG ? ? ? 1_555 A CYS 275 SG ? ? A CYS 305 A CYS 314 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf3 disulf ? ? A CYS 268 SG ? ? ? 1_555 A CYS 288 SG ? ? A CYS 307 A CYS 327 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf4 disulf ? ? A CYS 290 SG ? ? ? 1_555 A CYS 299 SG ? ? A CYS 329 A CYS 338 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf5 disulf ? ? A CYS 295 SG ? ? ? 1_555 A CYS 303 SG ? ? A CYS 334 A CYS 342 1_555 ? ? ? ? ? ? ? 2.061 ? ? disulf6 disulf ? ? A CYS 302 SG ? ? ? 1_555 A CYS 322 SG ? ? A CYS 341 A CYS 361 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf7 disulf ? ? A CYS 325 SG ? ? ? 1_555 A CYS 334 SG ? ? A CYS 364 A CYS 373 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf8 disulf ? ? A CYS 327 SG ? ? ? 1_555 A CYS 359 SG ? ? A CYS 366 A CYS 398 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf9 disulf ? ? A CYS 362 SG ? ? ? 1_555 A CYS 371 SG ? ? A CYS 401 A CYS 410 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf10 disulf ? ? A CYS 374 SG ? ? ? 1_555 A CYS 392 SG ? ? A CYS 413 A CYS 431 1_555 ? ? ? ? ? ? ? 2.040 ? ? covale1 covale one ? A ASN 109 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 148 B NAG 1 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale2 covale one ? A ASN 209 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 248 A NAG 2003 1_555 ? ? ? ? ? ? ? 1.459 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.385 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _database_PDB_matrix.entry_id 2Y38 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2Y38 _atom_sites.fract_transf_matrix[1][1] 0.008591 _atom_sites.fract_transf_matrix[1][2] 0.004960 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009920 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008905 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 40 ? ? ? A . n A 1 2 PRO 2 41 ? ? ? A . n A 1 3 LEU 3 42 ? ? ? A . n A 1 4 ALA 4 43 ? ? ? A . n A 1 5 GLY 5 44 ? ? ? A . n A 1 6 GLY 6 45 ? ? ? A . n A 1 7 ASP 7 46 ? ? ? A . n A 1 8 GLY 8 47 47 GLY GLY A . n A 1 9 PHE 9 48 48 PHE PHE A . n A 1 10 SER 10 49 49 SER SER A . n A 1 11 LEU 11 50 50 LEU LEU A . n A 1 12 HIS 12 51 51 HIS HIS A . n A 1 13 PRO 13 52 52 PRO PRO A . n A 1 14 PRO 14 53 53 PRO PRO A . n A 1 15 TYR 15 54 54 TYR TYR A . n A 1 16 PHE 16 55 55 PHE PHE A . n A 1 17 ASN 17 56 56 ASN ASN A . n A 1 18 LEU 18 57 57 LEU LEU A . n A 1 19 ALA 19 58 58 ALA ALA A . n A 1 20 GLU 20 59 59 GLU GLU A . n A 1 21 GLY 21 60 60 GLY GLY A . n A 1 22 ALA 22 61 61 ALA ALA A . n A 1 23 ARG 23 62 62 ARG ARG A . n A 1 24 ILE 24 63 63 ILE ILE A . n A 1 25 THR 25 64 64 THR THR A . n A 1 26 ALA 26 65 65 ALA ALA A . n A 1 27 SER 27 66 66 SER SER A . n A 1 28 ALA 28 67 67 ALA ALA A . n A 1 29 THR 29 68 68 THR THR A . n A 1 30 CYS 30 69 69 CYS CYS A . n A 1 31 GLY 31 70 ? ? ? A . n A 1 32 GLU 32 71 ? ? ? A . n A 1 33 GLU 33 72 ? ? ? A . n A 1 34 ALA 34 73 ? ? ? A . n A 1 35 PRO 35 74 ? ? ? A . n A 1 36 THR 36 75 ? ? ? A . n A 1 37 ARG 37 76 ? ? ? A . n A 1 38 SER 38 77 ? ? ? A . n A 1 39 VAL 39 78 ? ? ? A . n A 1 40 SER 40 79 ? ? ? A . n A 1 41 ARG 41 80 ? ? ? A . n A 1 42 PRO 42 81 ? ? ? A . n A 1 43 THR 43 82 ? ? ? A . n A 1 44 GLU 44 83 ? ? ? A . n A 1 45 ASP 45 84 ? ? ? A . n A 1 46 LEU 46 85 ? ? ? A . n A 1 47 TYR 47 86 ? ? ? A . n A 1 48 CYS 48 87 ? ? ? A . n A 1 49 LYS 49 88 ? ? ? A . n A 1 50 LEU 50 89 ? ? ? A . n A 1 51 VAL 51 90 ? ? ? A . n A 1 52 GLY 52 91 ? ? ? A . n A 1 53 GLY 53 92 ? ? ? A . n A 1 54 PRO 54 93 ? ? ? A . n A 1 55 VAL 55 94 ? ? ? A . n A 1 56 ALA 56 95 ? ? ? A . n A 1 57 GLY 57 96 ? ? ? A . n A 1 58 GLY 58 97 ? ? ? A . n A 1 59 ASP 59 98 ? ? ? A . n A 1 60 PRO 60 99 ? ? ? A . n A 1 61 ALA 61 100 ? ? ? A . n A 1 62 GLN 62 101 ? ? ? A . n A 1 63 THR 63 102 ? ? ? A . n A 1 64 ILE 64 103 ? ? ? A . n A 1 65 GLN 65 104 ? ? ? A . n A 1 66 GLY 66 105 ? ? ? A . n A 1 67 GLN 67 106 ? ? ? A . n A 1 68 TYR 68 107 ? ? ? A . n A 1 69 CYS 69 108 ? ? ? A . n A 1 70 ASP 70 109 ? ? ? A . n A 1 71 ILE 71 110 ? ? ? A . n A 1 72 CYS 72 111 ? ? ? A . n A 1 73 THR 73 112 ? ? ? A . n A 1 74 ALA 74 113 ? ? ? A . n A 1 75 ALA 75 114 ? ? ? A . n A 1 76 ASN 76 115 ? ? ? A . n A 1 77 SER 77 116 ? ? ? A . n A 1 78 ASN 78 117 ? ? ? A . n A 1 79 LYS 79 118 ? ? ? A . n A 1 80 ALA 80 119 ? ? ? A . n A 1 81 HIS 81 120 120 HIS HIS A . n A 1 82 PRO 82 121 121 PRO PRO A . n A 1 83 VAL 83 122 122 VAL VAL A . n A 1 84 SER 84 123 123 SER SER A . n A 1 85 ASN 85 124 124 ASN ASN A . n A 1 86 ALA 86 125 125 ALA ALA A . n A 1 87 ILE 87 126 126 ILE ILE A . n A 1 88 ASP 88 127 127 ASP ASP A . n A 1 89 GLY 89 128 128 GLY GLY A . n A 1 90 THR 90 129 129 THR THR A . n A 1 91 GLU 91 130 130 GLU GLU A . n A 1 92 ARG 92 131 131 ARG ARG A . n A 1 93 TRP 93 132 132 TRP TRP A . n A 1 94 TRP 94 133 133 TRP TRP A . n A 1 95 GLN 95 134 134 GLN GLN A . n A 1 96 SER 96 135 135 SER SER A . n A 1 97 PRO 97 136 136 PRO PRO A . n A 1 98 PRO 98 137 137 PRO PRO A . n A 1 99 LEU 99 138 138 LEU LEU A . n A 1 100 SER 100 139 139 SER SER A . n A 1 101 ARG 101 140 140 ARG ARG A . n A 1 102 GLY 102 141 141 GLY GLY A . n A 1 103 LEU 103 142 142 LEU LEU A . n A 1 104 GLU 104 143 143 GLU GLU A . n A 1 105 TYR 105 144 144 TYR TYR A . n A 1 106 ASN 106 145 145 ASN ASN A . n A 1 107 GLU 107 146 146 GLU GLU A . n A 1 108 VAL 108 147 147 VAL VAL A . n A 1 109 ASN 109 148 148 ASN ASN A . n A 1 110 VAL 110 149 149 VAL VAL A . n A 1 111 THR 111 150 150 THR THR A . n A 1 112 LEU 112 151 151 LEU LEU A . n A 1 113 ASP 113 152 152 ASP ASP A . n A 1 114 LEU 114 153 153 LEU LEU A . n A 1 115 GLY 115 154 154 GLY GLY A . n A 1 116 GLN 116 155 155 GLN GLN A . n A 1 117 VAL 117 156 156 VAL VAL A . n A 1 118 PHE 118 157 157 PHE PHE A . n A 1 119 HIS 119 158 158 HIS HIS A . n A 1 120 VAL 120 159 159 VAL VAL A . n A 1 121 ALA 121 160 160 ALA ALA A . n A 1 122 TYR 122 161 161 TYR TYR A . n A 1 123 VAL 123 162 162 VAL VAL A . n A 1 124 LEU 124 163 163 LEU LEU A . n A 1 125 ILE 125 164 164 ILE ILE A . n A 1 126 LYS 126 165 165 LYS LYS A . n A 1 127 PHE 127 166 166 PHE PHE A . n A 1 128 ALA 128 167 167 ALA ALA A . n A 1 129 ASN 129 168 168 ASN ASN A . n A 1 130 SER 130 169 169 SER SER A . n A 1 131 PRO 131 170 170 PRO PRO A . n A 1 132 ARG 132 171 171 ARG ARG A . n A 1 133 PRO 133 172 172 PRO PRO A . n A 1 134 ASP 134 173 173 ASP ASP A . n A 1 135 LEU 135 174 174 LEU LEU A . n A 1 136 TRP 136 175 175 TRP TRP A . n A 1 137 VAL 137 176 176 VAL VAL A . n A 1 138 LEU 138 177 177 LEU LEU A . n A 1 139 GLU 139 178 178 GLU GLU A . n A 1 140 ARG 140 179 179 ARG ARG A . n A 1 141 SER 141 180 180 SER SER A . n A 1 142 THR 142 181 181 THR THR A . n A 1 143 ASP 143 182 182 ASP ASP A . n A 1 144 PHE 144 183 183 PHE PHE A . n A 1 145 GLY 145 184 184 GLY GLY A . n A 1 146 HIS 146 185 185 HIS HIS A . n A 1 147 THR 147 186 186 THR THR A . n A 1 148 TYR 148 187 187 TYR TYR A . n A 1 149 GLN 149 188 188 GLN GLN A . n A 1 150 PRO 150 189 189 PRO PRO A . n A 1 151 TRP 151 190 190 TRP TRP A . n A 1 152 GLN 152 191 191 GLN GLN A . n A 1 153 PHE 153 192 192 PHE PHE A . n A 1 154 PHE 154 193 193 PHE PHE A . n A 1 155 ALA 155 194 194 ALA ALA A . n A 1 156 SER 156 195 195 SER SER A . n A 1 157 SER 157 196 196 SER SER A . n A 1 158 LYS 158 197 197 LYS LYS A . n A 1 159 ARG 159 198 198 ARG ARG A . n A 1 160 ASP 160 199 199 ASP ASP A . n A 1 161 CYS 161 200 200 CYS CYS A . n A 1 162 LEU 162 201 201 LEU LEU A . n A 1 163 GLU 163 202 202 GLU GLU A . n A 1 164 ARG 164 203 203 ARG ARG A . n A 1 165 PHE 165 204 204 PHE PHE A . n A 1 166 GLY 166 205 205 GLY GLY A . n A 1 167 PRO 167 206 206 PRO PRO A . n A 1 168 ARG 168 207 207 ARG ARG A . n A 1 169 THR 169 208 208 THR THR A . n A 1 170 LEU 170 209 209 LEU LEU A . n A 1 171 GLU 171 210 210 GLU GLU A . n A 1 172 ARG 172 211 211 ARG ARG A . n A 1 173 ILE 173 212 212 ILE ILE A . n A 1 174 THR 174 213 213 THR THR A . n A 1 175 GLN 175 214 214 GLN GLN A . n A 1 176 ASP 176 215 215 ASP ASP A . n A 1 177 ASP 177 216 216 ASP ASP A . n A 1 178 ASP 178 217 217 ASP ASP A . n A 1 179 VAL 179 218 218 VAL VAL A . n A 1 180 ILE 180 219 219 ILE ILE A . n A 1 181 CYS 181 220 220 CYS CYS A . n A 1 182 THR 182 221 221 THR THR A . n A 1 183 THR 183 222 222 THR THR A . n A 1 184 GLU 184 223 223 GLU GLU A . n A 1 185 TYR 185 224 224 TYR TYR A . n A 1 186 SER 186 225 225 SER SER A . n A 1 187 ARG 187 226 226 ARG ARG A . n A 1 188 ILE 188 227 227 ILE ILE A . n A 1 189 VAL 189 228 228 VAL VAL A . n A 1 190 PRO 190 229 229 PRO PRO A . n A 1 191 LEU 191 230 230 LEU LEU A . n A 1 192 GLU 192 231 231 GLU GLU A . n A 1 193 ASN 193 232 232 ASN ASN A . n A 1 194 GLY 194 233 233 GLY GLY A . n A 1 195 GLU 195 234 234 GLU GLU A . n A 1 196 ILE 196 235 235 ILE ILE A . n A 1 197 VAL 197 236 236 VAL VAL A . n A 1 198 VAL 198 237 237 VAL VAL A . n A 1 199 SER 199 238 238 SER SER A . n A 1 200 LEU 200 239 239 LEU LEU A . n A 1 201 VAL 201 240 240 VAL VAL A . n A 1 202 ASN 202 241 241 ASN ASN A . n A 1 203 GLY 203 242 242 GLY GLY A . n A 1 204 ARG 204 243 243 ARG ARG A . n A 1 205 PRO 205 244 244 PRO PRO A . n A 1 206 GLY 206 245 245 GLY GLY A . n A 1 207 ALA 207 246 246 ALA ALA A . n A 1 208 LEU 208 247 247 LEU LEU A . n A 1 209 ASN 209 248 248 ASN ASN A . n A 1 210 PHE 210 249 249 PHE PHE A . n A 1 211 SER 211 250 250 SER SER A . n A 1 212 TYR 212 251 251 TYR TYR A . n A 1 213 SER 213 252 252 SER SER A . n A 1 214 PRO 214 253 253 PRO PRO A . n A 1 215 LEU 215 254 254 LEU LEU A . n A 1 216 LEU 216 255 255 LEU LEU A . n A 1 217 ARG 217 256 256 ARG ARG A . n A 1 218 ASP 218 257 257 ASP ASP A . n A 1 219 PHE 219 258 258 PHE PHE A . n A 1 220 THR 220 259 259 THR THR A . n A 1 221 LYS 221 260 260 LYS LYS A . n A 1 222 ALA 222 261 261 ALA ALA A . n A 1 223 THR 223 262 262 THR THR A . n A 1 224 ASN 224 263 263 ASN ASN A . n A 1 225 ILE 225 264 264 ILE ILE A . n A 1 226 ARG 226 265 265 ARG ARG A . n A 1 227 LEU 227 266 266 LEU LEU A . n A 1 228 ARG 228 267 267 ARG ARG A . n A 1 229 PHE 229 268 268 PHE PHE A . n A 1 230 LEU 230 269 269 LEU LEU A . n A 1 231 ARG 231 270 270 ARG ARG A . n A 1 232 THR 232 271 271 THR THR A . n A 1 233 ASN 233 272 272 ASN ASN A . n A 1 234 THR 234 273 273 THR THR A . n A 1 235 LEU 235 274 274 LEU LEU A . n A 1 236 LEU 236 275 275 LEU LEU A . n A 1 237 GLY 237 276 276 GLY GLY A . n A 1 238 HIS 238 277 277 HIS HIS A . n A 1 239 LEU 239 278 278 LEU LEU A . n A 1 240 MET 240 279 279 MET MET A . n A 1 241 GLY 241 280 280 GLY GLY A . n A 1 242 LYS 242 281 281 LYS LYS A . n A 1 243 ALA 243 282 282 ALA ALA A . n A 1 244 LEU 244 283 283 LEU LEU A . n A 1 245 ARG 245 284 284 ARG ARG A . n A 1 246 ASP 246 285 285 ASP ASP A . n A 1 247 PRO 247 286 286 PRO PRO A . n A 1 248 THR 248 287 287 THR THR A . n A 1 249 VAL 249 288 288 VAL VAL A . n A 1 250 THR 250 289 289 THR THR A . n A 1 251 ARG 251 290 290 ARG ARG A . n A 1 252 ARG 252 291 291 ARG ARG A . n A 1 253 TYR 253 292 292 TYR TYR A . n A 1 254 TYR 254 293 293 TYR TYR A . n A 1 255 TYR 255 294 294 TYR TYR A . n A 1 256 SER 256 295 295 SER SER A . n A 1 257 ILE 257 296 296 ILE ILE A . n A 1 258 LYS 258 297 297 LYS LYS A . n A 1 259 ASP 259 298 298 ASP ASP A . n A 1 260 ILE 260 299 299 ILE ILE A . n A 1 261 SER 261 300 300 SER SER A . n A 1 262 ILE 262 301 301 ILE ILE A . n A 1 263 GLY 263 302 302 GLY GLY A . n A 1 264 GLY 264 303 303 GLY GLY A . n A 1 265 ARG 265 304 304 ARG ARG A . n A 1 266 CYS 266 305 305 CYS CYS A . n A 1 267 VAL 267 306 306 VAL VAL A . n A 1 268 CYS 268 307 307 CYS CYS A . n A 1 269 HIS 269 308 308 HIS HIS A . n A 1 270 GLY 270 309 309 GLY GLY A . n A 1 271 HIS 271 310 310 HIS HIS A . n A 1 272 ALA 272 311 311 ALA ALA A . n A 1 273 ASP 273 312 312 ASP ASP A . n A 1 274 VAL 274 313 313 VAL VAL A . n A 1 275 CYS 275 314 314 CYS CYS A . n A 1 276 ASP 276 315 315 ASP ASP A . n A 1 277 ALA 277 316 316 ALA ALA A . n A 1 278 LYS 278 317 317 LYS LYS A . n A 1 279 ASP 279 318 318 ASP ASP A . n A 1 280 PRO 280 319 319 PRO PRO A . n A 1 281 LEU 281 320 320 LEU LEU A . n A 1 282 ASP 282 321 321 ASP ASP A . n A 1 283 PRO 283 322 322 PRO PRO A . n A 1 284 PHE 284 323 323 PHE PHE A . n A 1 285 ARG 285 324 324 ARG ARG A . n A 1 286 LEU 286 325 325 LEU LEU A . n A 1 287 GLN 287 326 326 GLN GLN A . n A 1 288 CYS 288 327 327 CYS CYS A . n A 1 289 ALA 289 328 328 ALA ALA A . n A 1 290 CYS 290 329 329 CYS CYS A . n A 1 291 GLN 291 330 330 GLN GLN A . n A 1 292 HIS 292 331 331 HIS HIS A . n A 1 293 ASN 293 332 332 ASN ASN A . n A 1 294 THR 294 333 333 THR THR A . n A 1 295 CYS 295 334 334 CYS CYS A . n A 1 296 GLY 296 335 335 GLY GLY A . n A 1 297 GLY 297 336 336 GLY GLY A . n A 1 298 SER 298 337 337 SER SER A . n A 1 299 CYS 299 338 338 CYS CYS A . n A 1 300 ASP 300 339 339 ASP ASP A . n A 1 301 ARG 301 340 340 ARG ARG A . n A 1 302 CYS 302 341 341 CYS CYS A . n A 1 303 CYS 303 342 342 CYS CYS A . n A 1 304 PRO 304 343 343 PRO PRO A . n A 1 305 GLY 305 344 344 GLY GLY A . n A 1 306 PHE 306 345 345 PHE PHE A . n A 1 307 ASN 307 346 346 ASN ASN A . n A 1 308 GLN 308 347 347 GLN GLN A . n A 1 309 GLN 309 348 348 GLN GLN A . n A 1 310 PRO 310 349 349 PRO PRO A . n A 1 311 TRP 311 350 350 TRP TRP A . n A 1 312 LYS 312 351 351 LYS LYS A . n A 1 313 PRO 313 352 352 PRO PRO A . n A 1 314 ALA 314 353 353 ALA ALA A . n A 1 315 THR 315 354 354 THR THR A . n A 1 316 THR 316 355 355 THR THR A . n A 1 317 ASP 317 356 356 ASP ASP A . n A 1 318 SER 318 357 357 SER SER A . n A 1 319 ALA 319 358 358 ALA ALA A . n A 1 320 ASN 320 359 359 ASN ASN A . n A 1 321 GLU 321 360 360 GLU GLU A . n A 1 322 CYS 322 361 361 CYS CYS A . n A 1 323 GLN 323 362 362 GLN GLN A . n A 1 324 SER 324 363 363 SER SER A . n A 1 325 CYS 325 364 364 CYS CYS A . n A 1 326 ASN 326 365 365 ASN ASN A . n A 1 327 CYS 327 366 366 CYS CYS A . n A 1 328 HIS 328 367 367 HIS HIS A . n A 1 329 GLY 329 368 368 GLY GLY A . n A 1 330 HIS 330 369 369 HIS HIS A . n A 1 331 ALA 331 370 370 ALA ALA A . n A 1 332 TYR 332 371 371 TYR TYR A . n A 1 333 ASP 333 372 372 ASP ASP A . n A 1 334 CYS 334 373 373 CYS CYS A . n A 1 335 TYR 335 374 374 TYR TYR A . n A 1 336 TYR 336 375 375 TYR TYR A . n A 1 337 ASP 337 376 376 ASP ASP A . n A 1 338 PRO 338 377 377 PRO PRO A . n A 1 339 GLU 339 378 378 GLU GLU A . n A 1 340 VAL 340 379 379 VAL VAL A . n A 1 341 ASP 341 380 380 ASP ASP A . n A 1 342 ARG 342 381 381 ARG ARG A . n A 1 343 ARG 343 382 382 ARG ARG A . n A 1 344 GLU 344 383 383 GLU GLU A . n A 1 345 ALA 345 384 384 ALA ALA A . n A 1 346 SER 346 385 385 SER SER A . n A 1 347 GLN 347 386 386 GLN GLN A . n A 1 348 ASN 348 387 387 ASN ASN A . n A 1 349 GLN 349 388 388 GLN GLN A . n A 1 350 ASP 350 389 389 ASP ASP A . n A 1 351 ASN 351 390 390 ASN ASN A . n A 1 352 VAL 352 391 391 VAL VAL A . n A 1 353 TYR 353 392 392 TYR TYR A . n A 1 354 GLN 354 393 393 GLN GLN A . n A 1 355 GLY 355 394 394 GLY GLY A . n A 1 356 GLY 356 395 395 GLY GLY A . n A 1 357 GLY 357 396 396 GLY GLY A . n A 1 358 VAL 358 397 397 VAL VAL A . n A 1 359 CYS 359 398 398 CYS CYS A . n A 1 360 LEU 360 399 399 LEU LEU A . n A 1 361 ASP 361 400 400 ASP ASP A . n A 1 362 CYS 362 401 401 CYS CYS A . n A 1 363 GLN 363 402 402 GLN GLN A . n A 1 364 HIS 364 403 403 HIS HIS A . n A 1 365 HIS 365 404 404 HIS HIS A . n A 1 366 THR 366 405 405 THR THR A . n A 1 367 THR 367 406 406 THR THR A . n A 1 368 GLY 368 407 407 GLY GLY A . n A 1 369 ILE 369 408 408 ILE ILE A . n A 1 370 ASN 370 409 409 ASN ASN A . n A 1 371 CYS 371 410 410 CYS CYS A . n A 1 372 GLU 372 411 411 GLU GLU A . n A 1 373 ARG 373 412 412 ARG ARG A . n A 1 374 CYS 374 413 413 CYS CYS A . n A 1 375 LEU 375 414 414 LEU LEU A . n A 1 376 PRO 376 415 415 PRO PRO A . n A 1 377 GLY 377 416 416 GLY GLY A . n A 1 378 PHE 378 417 417 PHE PHE A . n A 1 379 PHE 379 418 418 PHE PHE A . n A 1 380 ARG 380 419 419 ARG ARG A . n A 1 381 ALA 381 420 420 ALA ALA A . n A 1 382 PRO 382 421 421 PRO PRO A . n A 1 383 ASP 383 422 422 ASP ASP A . n A 1 384 GLN 384 423 423 GLN GLN A . n A 1 385 PRO 385 424 424 PRO PRO A . n A 1 386 LEU 386 425 425 LEU LEU A . n A 1 387 ASP 387 426 426 ASP ASP A . n A 1 388 SER 388 427 427 SER SER A . n A 1 389 PRO 389 428 428 PRO PRO A . n A 1 390 HIS 390 429 429 HIS HIS A . n A 1 391 VAL 391 430 430 VAL VAL A . n A 1 392 CYS 392 431 431 CYS CYS A . n A 1 393 ARG 393 432 432 ARG ARG A . n A 1 394 PRO 394 433 433 PRO PRO A . n A 1 395 ALA 395 434 434 ALA ALA A . n A 1 396 ALA 396 435 435 ALA ALA A . n A 1 397 ALA 397 436 436 ALA ALA A . n A 1 398 HIS 398 437 437 HIS HIS A . n A 1 399 HIS 399 438 438 HIS HIS A . n A 1 400 HIS 400 439 ? ? ? A . n A 1 401 HIS 401 440 ? ? ? A . n A 1 402 HIS 402 441 ? ? ? A . n A 1 403 HIS 403 442 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 2003 3001 NAG NAG A . D 4 PO4 1 2004 4001 PO4 PO4 A . E 4 PO4 1 2005 5001 PO4 PO4 A . F 4 PO4 1 2006 6001 PO4 PO4 A . G 4 PO4 1 2007 7001 PO4 PO4 A . H 4 PO4 1 2008 8001 PO4 PO4 A . I 4 PO4 1 2009 9001 PO4 PO4 A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 109 A ASN 148 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 209 A ASN 248 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-23 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_branch_scheme 5 4 'Structure model' pdbx_chem_comp_identifier 6 4 'Structure model' pdbx_database_status 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' struct_asym 15 4 'Structure model' struct_conn 16 4 'Structure model' struct_site 17 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_asym_id' 2 4 'Structure model' '_atom_site.auth_seq_id' 3 4 'Structure model' '_atom_site.label_asym_id' 4 4 'Structure model' '_atom_site.label_entity_id' 5 4 'Structure model' '_chem_comp.name' 6 4 'Structure model' '_chem_comp.type' 7 4 'Structure model' '_pdbx_database_status.status_code_sf' 8 4 'Structure model' '_pdbx_entity_nonpoly.entity_id' 9 4 'Structure model' '_pdbx_entity_nonpoly.name' 10 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 11 4 'Structure model' '_struct_conn.pdbx_role' 12 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.2 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 autoSHARP phasing . ? 4 # _pdbx_entry_details.entry_id 2Y38 _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, ASN 100 TO ALA ENGINEERED RESIDUE IN CHAIN A, ASN 383 TO GLU ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 59 ? ? -20.23 -67.13 2 1 THR A 68 ? ? -152.67 -41.83 3 1 SER A 123 ? ? -36.53 -39.71 4 1 SER A 139 ? ? -34.90 -94.59 5 1 LEU A 142 ? ? -83.23 -73.05 6 1 TYR A 144 ? ? -80.18 38.54 7 1 GLN A 155 ? ? -90.64 -153.61 8 1 TYR A 161 ? ? -174.35 143.66 9 1 ALA A 167 ? ? -102.11 -111.08 10 1 SER A 169 ? ? -178.00 145.30 11 1 HIS A 185 ? ? -126.05 -119.11 12 1 THR A 186 ? ? -40.31 78.90 13 1 CYS A 200 ? ? -48.81 -70.26 14 1 PHE A 204 ? ? -108.62 -63.77 15 1 THR A 208 ? ? -69.47 38.07 16 1 LEU A 209 ? ? -142.72 -27.60 17 1 ASP A 215 ? ? -30.06 -31.22 18 1 THR A 222 ? ? -108.91 -62.99 19 1 GLU A 223 ? ? -3.10 -64.41 20 1 TYR A 224 ? ? -76.96 39.31 21 1 SER A 225 ? ? -145.62 16.55 22 1 ILE A 227 ? ? -33.87 -35.93 23 1 VAL A 228 ? ? -15.62 -77.95 24 1 GLU A 231 ? ? -115.87 -117.26 25 1 ASN A 232 ? ? -68.11 76.36 26 1 ARG A 243 ? ? -15.00 136.20 27 1 ASN A 248 ? ? -116.19 67.54 28 1 ASN A 272 ? ? -92.21 59.88 29 1 THR A 273 ? ? -63.28 87.17 30 1 LEU A 274 ? ? -114.52 -167.50 31 1 LEU A 275 ? ? 89.84 -94.08 32 1 ARG A 284 ? ? 82.96 49.39 33 1 PRO A 286 ? ? -63.03 29.91 34 1 ARG A 291 ? ? -147.69 23.21 35 1 TYR A 293 ? ? -165.50 -166.81 36 1 ASP A 298 ? ? 179.70 120.68 37 1 ASP A 315 ? ? -120.90 -169.14 38 1 PRO A 322 ? ? -46.46 -15.48 39 1 GLN A 330 ? ? -128.27 -168.92 40 1 SER A 337 ? ? -172.66 -11.32 41 1 PHE A 345 ? ? -113.56 75.04 42 1 HIS A 367 ? ? 34.98 45.15 43 1 ASN A 390 ? ? 83.80 29.43 44 1 GLN A 393 ? ? -117.92 56.07 45 1 HIS A 403 ? ? 75.62 31.28 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 62 ? CG ? A ARG 23 CG 2 1 Y 1 A ARG 62 ? CD ? A ARG 23 CD 3 1 Y 1 A ARG 62 ? NE ? A ARG 23 NE 4 1 Y 1 A ARG 62 ? CZ ? A ARG 23 CZ 5 1 Y 1 A ARG 62 ? NH1 ? A ARG 23 NH1 6 1 Y 1 A ARG 62 ? NH2 ? A ARG 23 NH2 7 1 Y 1 A ARG 140 ? CG ? A ARG 101 CG 8 1 Y 1 A ARG 140 ? CD ? A ARG 101 CD 9 1 Y 1 A ARG 140 ? NE ? A ARG 101 NE 10 1 Y 1 A ARG 140 ? CZ ? A ARG 101 CZ 11 1 Y 1 A ARG 140 ? NH1 ? A ARG 101 NH1 12 1 Y 1 A ARG 140 ? NH2 ? A ARG 101 NH2 13 1 Y 1 A ARG 198 ? CG ? A ARG 159 CG 14 1 Y 1 A ARG 198 ? CD ? A ARG 159 CD 15 1 Y 1 A ARG 198 ? NE ? A ARG 159 NE 16 1 Y 1 A ARG 198 ? CZ ? A ARG 159 CZ 17 1 Y 1 A ARG 198 ? NH1 ? A ARG 159 NH1 18 1 Y 1 A ARG 198 ? NH2 ? A ARG 159 NH2 19 1 Y 1 A ARG 207 ? CG ? A ARG 168 CG 20 1 Y 1 A ARG 207 ? CD ? A ARG 168 CD 21 1 Y 1 A ARG 207 ? NE ? A ARG 168 NE 22 1 Y 1 A ARG 207 ? CZ ? A ARG 168 CZ 23 1 Y 1 A ARG 207 ? NH1 ? A ARG 168 NH1 24 1 Y 1 A ARG 207 ? NH2 ? A ARG 168 NH2 25 1 Y 1 A LYS 281 ? CG ? A LYS 242 CG 26 1 Y 1 A LYS 281 ? CD ? A LYS 242 CD 27 1 Y 1 A LYS 281 ? CE ? A LYS 242 CE 28 1 Y 1 A LYS 281 ? NZ ? A LYS 242 NZ 29 1 Y 1 A ARG 290 ? CG ? A ARG 251 CG 30 1 Y 1 A ARG 290 ? CD ? A ARG 251 CD 31 1 Y 1 A ARG 290 ? NE ? A ARG 251 NE 32 1 Y 1 A ARG 290 ? CZ ? A ARG 251 CZ 33 1 Y 1 A ARG 290 ? NH1 ? A ARG 251 NH1 34 1 Y 1 A ARG 290 ? NH2 ? A ARG 251 NH2 35 1 Y 1 A LYS 317 ? CG ? A LYS 278 CG 36 1 Y 1 A LYS 317 ? CD ? A LYS 278 CD 37 1 Y 1 A LYS 317 ? CE ? A LYS 278 CE 38 1 Y 1 A LYS 317 ? NZ ? A LYS 278 NZ 39 1 Y 1 A ARG 381 ? CG ? A ARG 342 CG 40 1 Y 1 A ARG 381 ? CD ? A ARG 342 CD 41 1 Y 1 A ARG 381 ? NE ? A ARG 342 NE 42 1 Y 1 A ARG 381 ? CZ ? A ARG 342 CZ 43 1 Y 1 A ARG 381 ? NH1 ? A ARG 342 NH1 44 1 Y 1 A ARG 381 ? NH2 ? A ARG 342 NH2 45 1 Y 1 A ARG 432 ? CG ? A ARG 393 CG 46 1 Y 1 A ARG 432 ? CD ? A ARG 393 CD 47 1 Y 1 A ARG 432 ? NE ? A ARG 393 NE 48 1 Y 1 A ARG 432 ? CZ ? A ARG 393 CZ 49 1 Y 1 A ARG 432 ? NH1 ? A ARG 393 NH1 50 1 Y 1 A ARG 432 ? NH2 ? A ARG 393 NH2 51 1 Y 1 A HIS 438 ? CA ? A HIS 399 CA 52 1 Y 1 A HIS 438 ? C ? A HIS 399 C 53 1 Y 1 A HIS 438 ? O ? A HIS 399 O 54 1 Y 1 A HIS 438 ? CB ? A HIS 399 CB 55 1 Y 1 A HIS 438 ? CG ? A HIS 399 CG 56 1 Y 1 A HIS 438 ? ND1 ? A HIS 399 ND1 57 1 Y 1 A HIS 438 ? CD2 ? A HIS 399 CD2 58 1 Y 1 A HIS 438 ? CE1 ? A HIS 399 CE1 59 1 Y 1 A HIS 438 ? NE2 ? A HIS 399 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 40 ? A ALA 1 2 1 Y 1 A PRO 41 ? A PRO 2 3 1 Y 1 A LEU 42 ? A LEU 3 4 1 Y 1 A ALA 43 ? A ALA 4 5 1 Y 1 A GLY 44 ? A GLY 5 6 1 Y 1 A GLY 45 ? A GLY 6 7 1 Y 1 A ASP 46 ? A ASP 7 8 1 Y 1 A GLY 70 ? A GLY 31 9 1 Y 1 A GLU 71 ? A GLU 32 10 1 Y 1 A GLU 72 ? A GLU 33 11 1 Y 1 A ALA 73 ? A ALA 34 12 1 Y 1 A PRO 74 ? A PRO 35 13 1 Y 1 A THR 75 ? A THR 36 14 1 Y 1 A ARG 76 ? A ARG 37 15 1 Y 1 A SER 77 ? A SER 38 16 1 Y 1 A VAL 78 ? A VAL 39 17 1 Y 1 A SER 79 ? A SER 40 18 1 Y 1 A ARG 80 ? A ARG 41 19 1 Y 1 A PRO 81 ? A PRO 42 20 1 Y 1 A THR 82 ? A THR 43 21 1 Y 1 A GLU 83 ? A GLU 44 22 1 Y 1 A ASP 84 ? A ASP 45 23 1 Y 1 A LEU 85 ? A LEU 46 24 1 Y 1 A TYR 86 ? A TYR 47 25 1 Y 1 A CYS 87 ? A CYS 48 26 1 Y 1 A LYS 88 ? A LYS 49 27 1 Y 1 A LEU 89 ? A LEU 50 28 1 Y 1 A VAL 90 ? A VAL 51 29 1 Y 1 A GLY 91 ? A GLY 52 30 1 Y 1 A GLY 92 ? A GLY 53 31 1 Y 1 A PRO 93 ? A PRO 54 32 1 Y 1 A VAL 94 ? A VAL 55 33 1 Y 1 A ALA 95 ? A ALA 56 34 1 Y 1 A GLY 96 ? A GLY 57 35 1 Y 1 A GLY 97 ? A GLY 58 36 1 Y 1 A ASP 98 ? A ASP 59 37 1 Y 1 A PRO 99 ? A PRO 60 38 1 Y 1 A ALA 100 ? A ALA 61 39 1 Y 1 A GLN 101 ? A GLN 62 40 1 Y 1 A THR 102 ? A THR 63 41 1 Y 1 A ILE 103 ? A ILE 64 42 1 Y 1 A GLN 104 ? A GLN 65 43 1 Y 1 A GLY 105 ? A GLY 66 44 1 Y 1 A GLN 106 ? A GLN 67 45 1 Y 1 A TYR 107 ? A TYR 68 46 1 Y 1 A CYS 108 ? A CYS 69 47 1 Y 1 A ASP 109 ? A ASP 70 48 1 Y 1 A ILE 110 ? A ILE 71 49 1 Y 1 A CYS 111 ? A CYS 72 50 1 Y 1 A THR 112 ? A THR 73 51 1 Y 1 A ALA 113 ? A ALA 74 52 1 Y 1 A ALA 114 ? A ALA 75 53 1 Y 1 A ASN 115 ? A ASN 76 54 1 Y 1 A SER 116 ? A SER 77 55 1 Y 1 A ASN 117 ? A ASN 78 56 1 Y 1 A LYS 118 ? A LYS 79 57 1 Y 1 A ALA 119 ? A ALA 80 58 1 Y 1 A HIS 439 ? A HIS 400 59 1 Y 1 A HIS 440 ? A HIS 401 60 1 Y 1 A HIS 441 ? A HIS 402 61 1 Y 1 A HIS 442 ? A HIS 403 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 2001 n B 2 NAG 2 B NAG 2 A NAG 2002 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 'PHOSPHATE ION' PO4 #