HEADER OXIDOREDUCTASE 11-JAN-11 2Y53 TITLE CRYSTAL STRUCTURE OF E257Q MUTANT OF THE BOX PATHWAY TITLE 2 ENCODED ALDH FROM BURKHOLDERIA XENOVORANS LB400 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDEHYDE DEHYDROGENASE (BOX PATHWAY); COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALDEHYDE DEHYDROGENASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA XENOVORANS LB400; SOURCE 3 ORGANISM_TAXID: 266265; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE, NADP, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.BAINS,R.LEON,K.G.TEMKE,M.J.BOULANGER REVDAT 2 07-OCT-15 2Y53 1 SOURCE REMARK VERSN HETSYN REVDAT 2 2 LINK REVDAT 1 01-JUN-11 2Y53 0 JRNL AUTH J.BAINS,R.LEON,K.G.TEMKE,M.J.BOULANGER JRNL TITL ELUCIDATING THE REACTION MECHANISM OF THE BENZOATE JRNL TITL 2 OXIDATION PATHWAY ENCODED ALDEHYDE DEHYDROGENASE FROM JRNL TITL 3 BURKHOLDERIA XENOVORANS LB400. JRNL REF PROTEIN SCI. V. 20 1048 2011 JRNL REFN ISSN 0961-8368 JRNL PMID 21495107 JRNL DOI 10.1002/PRO.639 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 95.62 REMARK 3 NUMBER OF REFLECTIONS : 178404 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.15768 REMARK 3 R VALUE (WORKING SET) : 0.15621 REMARK 3 FREE R VALUE : 0.18545 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 9501 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.400 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.436 REMARK 3 REFLECTION IN BIN (WORKING SET) : 12832 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.209 REMARK 3 BIN FREE R VALUE SET COUNT : 696 REMARK 3 BIN FREE R VALUE : 0.261 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7789 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 120 REMARK 3 SOLVENT ATOMS : 1535 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.109 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01 REMARK 3 B22 (A**2) : -0.02 REMARK 3 B33 (A**2) : 0.00 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : -0.01 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.059 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.035 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.864 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8073 ; 0.030 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11013 ; 2.615 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1059 ; 5.945 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 321 ;33.318 ;23.022 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1208 ;13.373 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 66 ;20.238 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1294 ; 0.177 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6104 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5244 ; 1.361 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8350 ; 2.203 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2829 ; 3.774 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2661 ; 5.790 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WERE REFINED INDIVIDUALLY. REMARK 4 REMARK 4 2Y53 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-FEB-11. REMARK 100 THE PDBE ID CODE IS EBI-46972. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : CCP4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 187905 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.40 REMARK 200 RESOLUTION RANGE LOW (A) : 23.44 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 4.0 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.70 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 257 TO GLN REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLU 257 TO GLN REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 THR A 417 REMARK 465 ASN A 418 REMARK 465 ALA A 419 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 THR B 417 REMARK 465 ASN B 418 REMARK 465 ALA B 419 REMARK 465 HIS B 527 REMARK 465 TRP B 528 REMARK 465 PRO B 529 REMARK 465 ALA B 530 REMARK 465 ALA B 531 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE1 HIS A 0 O HOH A 2004 1.99 REMARK 500 OD1 ASP A 71 O HOH A 2205 2.18 REMARK 500 CB SER A 129 O HOH A 2321 1.43 REMARK 500 OG SER A 129 O HOH A 2321 1.54 REMARK 500 OD1 ASP A 200 O HOH A 2419 2.19 REMARK 500 CD1 LEU A 241 O HOH A 2470 2.05 REMARK 500 CB VAL A 248 O HOH A 2476 1.67 REMARK 500 CG2 VAL A 248 O HOH A 2476 2.13 REMARK 500 CG GLN A 249 O HOH A 2480 2.17 REMARK 500 N ASP A 259 C4N NAP A 1534 1.52 REMARK 500 OD2 ASP A 259 O HOH A 2491 2.14 REMARK 500 CG GLU A 310 O HOH A 2525 2.13 REMARK 500 CB ARG A 341 O HOH A 2569 1.61 REMARK 500 CG ARG A 341 O HOH A 2569 2.13 REMARK 500 CD GLU A 345 O HOH A 2577 1.69 REMARK 500 OE2 GLU A 345 O HOH A 2577 0.60 REMARK 500 OE2 GLU A 356 O HOH A 2588 2.07 REMARK 500 CZ PHE A 402 O2D NAP A 1534 1.84 REMARK 500 CB ASP A 416 O HOH A 2686 2.06 REMARK 500 N LEU A 420 O HOH A 2690 1.95 REMARK 500 NH1 ARG A 430 O HOH A 2695 1.93 REMARK 500 OE2 GLU A 495 NH1A ARG B 508 2.12 REMARK 500 SD MET B 1 O HOH B 2027 1.78 REMARK 500 NZ LYS B 6 O HOH B 2024 2.15 REMARK 500 OE2 GLU B 51 O HOH B 2135 2.13 REMARK 500 NH1 ARG B 149 O HOH B 2333 1.76 REMARK 500 O GLY B 233 N7N NAP B 1527 2.08 REMARK 500 CB VAL B 248 O HOH A 2467 1.70 REMARK 500 CD ARG B 286 O HOH B 2462 2.14 REMARK 500 OE2B GLU B 357 OG1 THR B 394 1.76 REMARK 500 N LEU B 420 O HOH B 2626 2.10 REMARK 500 NE ARG B 450 O HOH B 2652 2.10 REMARK 500 CG A ARG B 508 O HOH B 2709 1.98 REMARK 500 NH2 ARG B 509 O HOH B 2716 1.96 REMARK 500 C5D NAP A 1534 O HOH A 2795 2.02 REMARK 500 O3B NAP B 1527 O HOH B 2730 1.85 REMARK 500 C6N NAP B 1527 O HOH B 2724 2.11 REMARK 500 O HOH A 2012 O HOH A 2014 1.91 REMARK 500 O HOH A 2067 O HOH A 2073 2.15 REMARK 500 O HOH A 2092 O HOH A 2296 2.08 REMARK 500 O HOH A 2107 O HOH A 2109 1.98 REMARK 500 O HOH A 2205 O HOH A 2212 1.96 REMARK 500 O HOH A 2254 O HOH A 2381 1.84 REMARK 500 O HOH A 2315 O HOH A 2316 2.14 REMARK 500 O HOH A 2336 O HOH A 2625 2.07 REMARK 500 O HOH A 2393 O HOH A 2772 2.16 REMARK 500 O HOH A 2429 O HOH A 2435 1.95 REMARK 500 O HOH A 2530 O HOH A 2531 1.97 REMARK 500 O HOH A 2539 O HOH A 2543 2.07 REMARK 500 O HOH A 2565 O HOH A 2566 2.16 REMARK 500 REMARK 500 THIS ENTRY HAS 79 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2003 O HOH A 2109 2666 2.11 REMARK 500 O HOH B 2189 O HOH A 2239 2666 2.18 REMARK 500 O HOH B 2192 O HOH A 2238 2666 2.05 REMARK 500 O HOH B 2431 O HOH B 2665 2455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 118 CB SER A 118 OG 0.079 REMARK 500 SER A 129 CB SER A 129 OG -0.222 REMARK 500 PHE A 226 CD1 PHE A 226 CE1 0.167 REMARK 500 VAL A 248 CB VAL A 248 CG2 -0.184 REMARK 500 SER A 260 CB SER A 260 OG -0.104 REMARK 500 ARG A 341 CB ARG A 341 CG 0.217 REMARK 500 ARG A 341 CD ARG A 341 NE 0.107 REMARK 500 ARG A 341 CZ ARG A 341 NH1 0.105 REMARK 500 ARG A 341 CZ ARG A 341 NH2 0.154 REMARK 500 GLU A 342 CD GLU A 342 OE1 0.077 REMARK 500 GLU A 345 CD GLU A 345 OE1 -0.107 REMARK 500 ASN A 375 CB ASN A 375 CG 0.210 REMARK 500 TYR A 411 CE2 TYR A 411 CZ 0.085 REMARK 500 TYR A 411 CG TYR A 411 CD1 0.081 REMARK 500 ARG A 412 CZ ARG A 412 NH2 -0.137 REMARK 500 ALA A 446 CA ALA A 446 CB -0.146 REMARK 500 ARG A 508 CZ ARG A 508 NH2 -0.084 REMARK 500 SER B 36 CB SER B 36 OG 0.087 REMARK 500 GLU B 51 CB GLU B 51 CG -0.167 REMARK 500 GLU B 51 CG GLU B 51 CD -0.101 REMARK 500 GLU B 131 CD GLU B 131 OE2 -0.067 REMARK 500 VAL B 386 CB VAL B 386 CG2 -0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 65 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 65 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 68 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG A 126 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP A 127 CB - CG - OD1 ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG A 149 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ASP A 221 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 PHE A 226 CB - CG - CD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 PHE A 226 CB - CG - CD2 ANGL. DEV. = -4.8 DEGREES REMARK 500 LEU A 241 CA - CB - CG ANGL. DEV. = 23.5 DEGREES REMARK 500 ASP A 259 CB - CG - OD2 ANGL. DEV. = 8.5 DEGREES REMARK 500 ASP A 259 N - CA - CB ANGL. DEV. = 11.4 DEGREES REMARK 500 SER A 260 N - CA - CB ANGL. DEV. = -12.6 DEGREES REMARK 500 ASP A 278 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 278 CB - CG - OD2 ANGL. DEV. = -7.9 DEGREES REMARK 500 ARG A 301 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 329 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 341 CB - CG - CD ANGL. DEV. = 18.7 DEGREES REMARK 500 ARG A 341 NE - CZ - NH1 ANGL. DEV. = -15.7 DEGREES REMARK 500 ARG A 341 NE - CZ - NH2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 341 NH1 - CZ - NH2 ANGL. DEV. = 9.6 DEGREES REMARK 500 GLU A 345 CG - CD - OE1 ANGL. DEV. = 15.8 DEGREES REMARK 500 GLU A 345 CG - CD - OE2 ANGL. DEV. = -12.9 DEGREES REMARK 500 ARG A 412 CD - NE - CZ ANGL. DEV. = 10.8 DEGREES REMARK 500 ARG A 412 NE - CZ - NH1 ANGL. DEV. = 15.0 DEGREES REMARK 500 ARG A 412 NE - CZ - NH2 ANGL. DEV. = -15.5 DEGREES REMARK 500 LEU A 448 CB - CG - CD2 ANGL. DEV. = 12.7 DEGREES REMARK 500 ASP A 457 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 490 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 508 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 HIS B 0 N - CA - C ANGL. DEV. = -21.0 DEGREES REMARK 500 ARG B 58 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 71 CB - CG - OD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ASP B 221 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP B 227 CB - CG - OD2 ANGL. DEV. = -9.4 DEGREES REMARK 500 SER B 260 N - CA - CB ANGL. DEV. = -9.5 DEGREES REMARK 500 ARG B 300 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG B 412 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG B 412 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG B 431 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 450 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP B 457 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP B 457 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG B 501 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 TYR B 506 CB - CG - CD2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 508 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 121 58.48 -95.54 REMARK 500 GLN A 294 47.14 -88.64 REMARK 500 ASP A 363 119.55 -162.89 REMARK 500 ALA A 378 38.88 -93.84 REMARK 500 LEU A 497 -138.37 56.18 REMARK 500 LEU B 32 -61.34 -102.18 REMARK 500 ALA B 258 -159.71 -124.87 REMARK 500 GLN B 294 50.22 -93.52 REMARK 500 SER B 364 30.00 -93.76 REMARK 500 LEU B 497 -139.35 52.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASP A 259 16.3 L L OUTSIDE RANGE REMARK 500 THR A 415 20.3 L L OUTSIDE RANGE REMARK 500 LEU A 522 24.7 L L OUTSIDE RANGE REMARK 500 THR A 523 22.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1532 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A1534 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B1527 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1528 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1529 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1533 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Y5D RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF C296A MUTANT OF THE BOX PATHWAY REMARK 900 ENCODED ALDH FROM BURKHOLDERIA XENOVORANS LB400 REMARK 900 RELATED ID: 2Y52 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E496A MUTANT OF THE BOX PATHWAY REMARK 900 ENCODED ALDH FROM BURKHOLDERIA XENOVORANS LB400 REMARK 900 RELATED ID: 2VRO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ALDEHYDE DEHYDROGENASE FROM REMARK 900 BURKHOLDERIA XENOVORANS LB400 REMARK 900 RELATED ID: 2Y51 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E167A MUTANT OF THE BOX PATHWAY REMARK 900 ENCODED ALDH FROM BURKHOLDERIA XENOVORANS LB400 DBREF 2Y53 A 1 531 UNP Q13WK4 Q13WK4_BURXL 1 531 DBREF 2Y53 B 1 531 UNP Q13WK4 Q13WK4_BURXL 1 531 SEQADV 2Y53 GLY A -2 UNP Q13WK4 EXPRESSION TAG SEQADV 2Y53 SER A -1 UNP Q13WK4 EXPRESSION TAG SEQADV 2Y53 HIS A 0 UNP Q13WK4 EXPRESSION TAG SEQADV 2Y53 GLN A 257 UNP Q13WK4 GLU 257 ENGINEERED MUTATION SEQADV 2Y53 GLY B -2 UNP Q13WK4 EXPRESSION TAG SEQADV 2Y53 SER B -1 UNP Q13WK4 EXPRESSION TAG SEQADV 2Y53 HIS B 0 UNP Q13WK4 EXPRESSION TAG SEQADV 2Y53 GLN B 257 UNP Q13WK4 GLU 257 ENGINEERED MUTATION SEQRES 1 A 534 GLY SER HIS MET THR GLU LEU LEU LYS ASN HIS VAL ALA SEQRES 2 A 534 GLY GLN TRP ILE ALA GLY THR GLY ALA GLY ILE THR LEU SEQRES 3 A 534 THR ASP PRO VAL THR GLY VAL ALA LEU VAL ARG VAL SER SEQRES 4 A 534 SER GLU GLY LEU ASP LEU ALA ARG ALA PHE SER PHE ALA SEQRES 5 A 534 ARG GLU ASP GLY GLY ALA ALA LEU ARG ALA LEU THR TYR SEQRES 6 A 534 ALA GLN ARG ALA ALA ARG LEU ALA ASP ILE VAL LYS LEU SEQRES 7 A 534 LEU GLN ALA LYS ARG GLY ASP TYR TYR ALA ILE ALA THR SEQRES 8 A 534 ALA ASN SER GLY THR THR ARG ASN ASP SER ALA VAL ASP SEQRES 9 A 534 ILE ASP GLY GLY ILE PHE THR LEU SER TYR TYR ALA LYS SEQRES 10 A 534 LEU GLY ALA SER LEU GLY GLU VAL HIS ALA LEU ARG ASP SEQRES 11 A 534 GLY SER ALA GLU SER LEU SER LYS ASP ARG SER PHE SER SEQRES 12 A 534 ALA GLN HIS VAL LEU SER PRO THR ARG GLY VAL ALA LEU SEQRES 13 A 534 PHE ILE ASN ALA PHE ASN PHE PRO SER TRP GLY LEU TRP SEQRES 14 A 534 GLU LYS ALA ALA PRO ALA LEU LEU SER GLY VAL PRO VAL SEQRES 15 A 534 ILE VAL LYS PRO ALA THR ALA THR ALA TRP LEU THR GLN SEQRES 16 A 534 ARG MET VAL ALA ASP VAL VAL ASP ALA GLY ILE LEU PRO SEQRES 17 A 534 PRO GLY ALA LEU SER ILE ILE CYS GLY SER SER ALA GLY SEQRES 18 A 534 LEU LEU ASP GLN ILE ARG SER PHE ASP VAL VAL SER PHE SEQRES 19 A 534 THR GLY SER ALA ASP THR ALA ALA THR LEU ARG ALA HIS SEQRES 20 A 534 PRO ALA PHE VAL GLN ARG GLY ALA ARG LEU ASN VAL GLN SEQRES 21 A 534 ALA ASP SER LEU ASN SER ALA ILE LEU CYS ALA ASP ALA SEQRES 22 A 534 THR PRO ASP THR PRO ALA PHE ASP LEU PHE ILE LYS GLU SEQRES 23 A 534 VAL VAL ARG GLU MET THR VAL LYS SER GLY GLN LYS CYS SEQRES 24 A 534 THR ALA ILE ARG ARG ALA PHE VAL PRO GLU ALA ALA LEU SEQRES 25 A 534 GLU PRO VAL LEU GLU ALA LEU LYS ALA LYS LEU ALA LYS SEQRES 26 A 534 ILE THR VAL GLY ASN PRO ARG ASN ASP ALA VAL ARG MET SEQRES 27 A 534 GLY SER LEU VAL SER ARG GLU GLN TYR GLU ASN VAL LEU SEQRES 28 A 534 ALA GLY ILE ALA ALA LEU ARG GLU GLU ALA VAL LEU ALA SEQRES 29 A 534 TYR ASP SER SER ALA VAL PRO LEU ILE ASP ALA ASP ALA SEQRES 30 A 534 ASN ILE ALA ALA CYS VAL ALA PRO HIS LEU PHE VAL VAL SEQRES 31 A 534 ASN ASP PRO ASP ASN ALA THR LEU LEU HIS ASP VAL GLU SEQRES 32 A 534 VAL PHE GLY PRO VAL ALA SER VAL ALA PRO TYR ARG VAL SEQRES 33 A 534 THR THR ASP THR ASN ALA LEU PRO GLU ALA HIS ALA VAL SEQRES 34 A 534 ALA LEU ALA ARG ARG GLY GLN GLY SER LEU VAL ALA SER SEQRES 35 A 534 ILE TYR SER ASN ASP ASP ALA HIS LEU GLY ARG LEU ALA SEQRES 36 A 534 LEU GLU LEU ALA ASP SER HIS GLY ARG VAL HIS ALA ILE SEQRES 37 A 534 SER PRO SER VAL GLN HIS SER GLN THR GLY HIS GLY ASN SEQRES 38 A 534 VAL MET PRO MET SER LEU HIS GLY GLY PRO GLY ARG ALA SEQRES 39 A 534 GLY GLY GLY GLU GLU LEU GLY GLY LEU ARG ALA LEU ALA SEQRES 40 A 534 PHE TYR HIS ARG ARG SER ALA ILE GLN ALA ALA SER ALA SEQRES 41 A 534 ALA ILE GLY THR LEU THR GLN ALA THR HIS TRP PRO ALA SEQRES 42 A 534 ALA SEQRES 1 B 534 GLY SER HIS MET THR GLU LEU LEU LYS ASN HIS VAL ALA SEQRES 2 B 534 GLY GLN TRP ILE ALA GLY THR GLY ALA GLY ILE THR LEU SEQRES 3 B 534 THR ASP PRO VAL THR GLY VAL ALA LEU VAL ARG VAL SER SEQRES 4 B 534 SER GLU GLY LEU ASP LEU ALA ARG ALA PHE SER PHE ALA SEQRES 5 B 534 ARG GLU ASP GLY GLY ALA ALA LEU ARG ALA LEU THR TYR SEQRES 6 B 534 ALA GLN ARG ALA ALA ARG LEU ALA ASP ILE VAL LYS LEU SEQRES 7 B 534 LEU GLN ALA LYS ARG GLY ASP TYR TYR ALA ILE ALA THR SEQRES 8 B 534 ALA ASN SER GLY THR THR ARG ASN ASP SER ALA VAL ASP SEQRES 9 B 534 ILE ASP GLY GLY ILE PHE THR LEU SER TYR TYR ALA LYS SEQRES 10 B 534 LEU GLY ALA SER LEU GLY GLU VAL HIS ALA LEU ARG ASP SEQRES 11 B 534 GLY SER ALA GLU SER LEU SER LYS ASP ARG SER PHE SER SEQRES 12 B 534 ALA GLN HIS VAL LEU SER PRO THR ARG GLY VAL ALA LEU SEQRES 13 B 534 PHE ILE ASN ALA PHE ASN PHE PRO SER TRP GLY LEU TRP SEQRES 14 B 534 GLU LYS ALA ALA PRO ALA LEU LEU SER GLY VAL PRO VAL SEQRES 15 B 534 ILE VAL LYS PRO ALA THR ALA THR ALA TRP LEU THR GLN SEQRES 16 B 534 ARG MET VAL ALA ASP VAL VAL ASP ALA GLY ILE LEU PRO SEQRES 17 B 534 PRO GLY ALA LEU SER ILE ILE CYS GLY SER SER ALA GLY SEQRES 18 B 534 LEU LEU ASP GLN ILE ARG SER PHE ASP VAL VAL SER PHE SEQRES 19 B 534 THR GLY SER ALA ASP THR ALA ALA THR LEU ARG ALA HIS SEQRES 20 B 534 PRO ALA PHE VAL GLN ARG GLY ALA ARG LEU ASN VAL GLN SEQRES 21 B 534 ALA ASP SER LEU ASN SER ALA ILE LEU CYS ALA ASP ALA SEQRES 22 B 534 THR PRO ASP THR PRO ALA PHE ASP LEU PHE ILE LYS GLU SEQRES 23 B 534 VAL VAL ARG GLU MET THR VAL LYS SER GLY GLN LYS CYS SEQRES 24 B 534 THR ALA ILE ARG ARG ALA PHE VAL PRO GLU ALA ALA LEU SEQRES 25 B 534 GLU PRO VAL LEU GLU ALA LEU LYS ALA LYS LEU ALA LYS SEQRES 26 B 534 ILE THR VAL GLY ASN PRO ARG ASN ASP ALA VAL ARG MET SEQRES 27 B 534 GLY SER LEU VAL SER ARG GLU GLN TYR GLU ASN VAL LEU SEQRES 28 B 534 ALA GLY ILE ALA ALA LEU ARG GLU GLU ALA VAL LEU ALA SEQRES 29 B 534 TYR ASP SER SER ALA VAL PRO LEU ILE ASP ALA ASP ALA SEQRES 30 B 534 ASN ILE ALA ALA CYS VAL ALA PRO HIS LEU PHE VAL VAL SEQRES 31 B 534 ASN ASP PRO ASP ASN ALA THR LEU LEU HIS ASP VAL GLU SEQRES 32 B 534 VAL PHE GLY PRO VAL ALA SER VAL ALA PRO TYR ARG VAL SEQRES 33 B 534 THR THR ASP THR ASN ALA LEU PRO GLU ALA HIS ALA VAL SEQRES 34 B 534 ALA LEU ALA ARG ARG GLY GLN GLY SER LEU VAL ALA SER SEQRES 35 B 534 ILE TYR SER ASN ASP ASP ALA HIS LEU GLY ARG LEU ALA SEQRES 36 B 534 LEU GLU LEU ALA ASP SER HIS GLY ARG VAL HIS ALA ILE SEQRES 37 B 534 SER PRO SER VAL GLN HIS SER GLN THR GLY HIS GLY ASN SEQRES 38 B 534 VAL MET PRO MET SER LEU HIS GLY GLY PRO GLY ARG ALA SEQRES 39 B 534 GLY GLY GLY GLU GLU LEU GLY GLY LEU ARG ALA LEU ALA SEQRES 40 B 534 PHE TYR HIS ARG ARG SER ALA ILE GLN ALA ALA SER ALA SEQRES 41 B 534 ALA ILE GLY THR LEU THR GLN ALA THR HIS TRP PRO ALA SEQRES 42 B 534 ALA HET GOL A1532 6 HET NAP A1534 48 HET NAP B1527 48 HET GOL B1528 6 HET GOL B1529 6 HET GOL A1533 6 HETNAM GOL GLYCEROL HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NAP PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 4 NAP 2(C21 H28 N7 O17 P3) FORMUL 5 HOH *1535(H2 O) HELIX 1 1 ASP A 41 LEU A 60 1 20 HELIX 2 2 THR A 61 LYS A 79 1 19 HELIX 3 3 LYS A 79 GLY A 92 1 14 HELIX 4 4 THR A 94 SER A 118 1 25 HELIX 5 5 SER A 162 SER A 175 1 14 HELIX 6 6 ALA A 184 ALA A 186 5 3 HELIX 7 7 THR A 187 GLY A 202 1 16 HELIX 8 8 LEU A 219 ILE A 223 5 5 HELIX 9 9 SER A 234 ALA A 243 1 10 HELIX 10 10 HIS A 244 GLN A 249 1 6 HELIX 11 11 THR A 274 VAL A 290 1 17 HELIX 12 12 LYS A 291 GLN A 294 5 4 HELIX 13 13 ALA A 308 ALA A 321 1 14 HELIX 14 14 SER A 340 GLU A 356 1 17 HELIX 15 15 ASP A 389 ALA A 393 5 5 HELIX 16 16 GLU A 422 ARG A 431 1 10 HELIX 17 17 ASP A 444 ALA A 456 1 13 HELIX 18 18 SER A 466 GLN A 470 5 5 HELIX 19 19 PRO A 488 GLY A 492 5 5 HELIX 20 20 GLY A 499 PHE A 505 5 7 HELIX 21 21 SER A 516 GLN A 524 1 9 HELIX 22 22 ASP B 41 GLU B 51 1 11 HELIX 23 23 GLU B 51 LEU B 60 1 10 HELIX 24 24 THR B 61 LYS B 79 1 19 HELIX 25 25 LYS B 79 GLY B 92 1 14 HELIX 26 26 THR B 94 SER B 118 1 25 HELIX 27 27 SER B 162 SER B 175 1 14 HELIX 28 28 ALA B 184 ALA B 186 5 3 HELIX 29 29 THR B 187 GLY B 202 1 16 HELIX 30 30 LEU B 219 ILE B 223 5 5 HELIX 31 31 SER B 234 ALA B 243 1 10 HELIX 32 32 HIS B 244 GLN B 249 1 6 HELIX 33 33 THR B 274 VAL B 290 1 17 HELIX 34 34 LYS B 291 GLN B 294 5 4 HELIX 35 35 ALA B 308 ALA B 321 1 14 HELIX 36 36 SER B 340 GLU B 356 1 17 HELIX 37 37 ASP B 389 ALA B 393 5 5 HELIX 38 38 THR B 394 ASP B 398 5 5 HELIX 39 39 GLU B 422 ARG B 431 1 10 HELIX 40 40 ASP B 444 ALA B 456 1 13 HELIX 41 41 SER B 466 GLN B 470 5 5 HELIX 42 42 PRO B 488 GLY B 492 5 5 HELIX 43 43 GLY B 499 PHE B 505 5 7 HELIX 44 44 SER B 516 ALA B 525 1 10 SHEET 1 AA 3 GLU A 3 LEU A 4 0 SHEET 2 AA 3 ALA A 31 VAL A 35 1 O LEU A 32 N GLU A 3 SHEET 3 AA 3 ILE A 21 THR A 24 -1 O ILE A 21 N VAL A 35 SHEET 1 AB 2 ASN A 7 VAL A 9 0 SHEET 2 AB 2 GLN A 12 ILE A 14 -1 O GLN A 12 N VAL A 9 SHEET 1 AC11 THR A 526 HIS A 527 0 SHEET 2 AC11 ALA A 124 SER A 132 1 O ALA A 124 N HIS A 527 SHEET 3 AC11 PHE A 139 PRO A 147 -1 O ALA A 141 N GLU A 131 SHEET 4 AC11 HIS A 507 ALA A 515 -1 O ARG A 508 N SER A 146 SHEET 5 AC11 HIS B 459 ILE B 465 1 O GLY B 460 N ALA A 511 SHEET 6 AC11 SER B 435 TYR B 441 1 O SER B 435 N GLY B 460 SHEET 7 AC11 ASN B 262 LEU B 266 1 O SER B 263 N SER B 439 SHEET 8 AC11 ILE B 299 PRO B 305 1 N ARG B 300 O ASN B 262 SHEET 9 AC11 VAL B 405 TYR B 411 1 O SER B 407 N ALA B 302 SHEET 10 AC11 HIS B 383 VAL B 386 1 O HIS B 383 N ALA B 406 SHEET 11 AC11 VAL B 359 ASP B 363 -1 O VAL B 359 N VAL B 386 SHEET 1 AD 5 LEU A 209 ILE A 211 0 SHEET 2 AD 5 VAL A 179 LYS A 182 1 O VAL A 179 N SER A 210 SHEET 3 AD 5 ALA A 152 ILE A 155 1 O ALA A 152 N ILE A 180 SHEET 4 AD 5 VAL A 228 THR A 232 1 O VAL A 228 N LEU A 153 SHEET 5 AD 5 ARG A 253 GLN A 257 1 O ARG A 253 N VAL A 229 SHEET 1 AE10 VAL A 359 ASP A 363 0 SHEET 2 AE10 HIS A 383 VAL A 386 -1 O LEU A 384 N ALA A 361 SHEET 3 AE10 VAL A 405 TYR A 411 1 O ALA A 406 N PHE A 385 SHEET 4 AE10 ILE A 299 PRO A 305 1 O ARG A 300 N SER A 407 SHEET 5 AE10 ASN A 262 LEU A 266 1 O ASN A 262 N ARG A 300 SHEET 6 AE10 SER A 435 TYR A 441 1 O VAL A 437 N SER A 263 SHEET 7 AE10 HIS A 459 ILE A 465 1 N GLY A 460 O SER A 435 SHEET 8 AE10 HIS B 507 ALA B 515 1 O ALA B 511 N VAL A 462 SHEET 9 AE10 PHE B 139 PRO B 147 -1 O SER B 140 N ALA B 514 SHEET 10 AE10 LEU B 125 SER B 132 -1 O LEU B 125 N LEU B 145 SHEET 1 AF 2 LEU A 484 HIS A 485 0 SHEET 2 AF 2 GLU A 496 LEU A 497 -1 O GLU A 496 N HIS A 485 SHEET 1 BA 3 GLU B 3 LEU B 4 0 SHEET 2 BA 3 ALA B 31 VAL B 35 1 O LEU B 32 N GLU B 3 SHEET 3 BA 3 ILE B 21 THR B 24 -1 O ILE B 21 N VAL B 35 SHEET 1 BB 2 ASN B 7 VAL B 9 0 SHEET 2 BB 2 GLN B 12 ILE B 14 -1 O GLN B 12 N VAL B 9 SHEET 1 BC 5 LEU B 209 ILE B 211 0 SHEET 2 BC 5 VAL B 179 LYS B 182 1 O VAL B 179 N SER B 210 SHEET 3 BC 5 ALA B 152 ILE B 155 1 O ALA B 152 N ILE B 180 SHEET 4 BC 5 VAL B 228 THR B 232 1 O VAL B 228 N LEU B 153 SHEET 5 BC 5 ARG B 253 GLN B 257 1 O ARG B 253 N VAL B 229 SHEET 1 BD 2 LEU B 484 HIS B 485 0 SHEET 2 BD 2 GLU B 496 LEU B 497 -1 O GLU B 496 N HIS B 485 CISPEP 1 HIS A 0 MET A 1 0 -9.44 CISPEP 2 HIS B 0 MET B 1 0 -15.24 SITE 1 AC1 9 ARG A 242 LEU A 254 VAL A 256 GLY A 492 SITE 2 AC1 9 GLY A 493 GLY A 494 HOH A2790 HOH A2791 SITE 3 AC1 9 HOH B2429 SITE 1 AC2 24 ASN A 156 ALA A 157 PHE A 158 ASN A 159 SITE 2 AC2 24 LYS A 182 ALA A 184 THR A 185 SER A 216 SITE 3 AC2 24 PHE A 231 THR A 232 GLY A 233 SER A 234 SITE 4 AC2 24 ALA A 235 THR A 237 ALA A 258 ASP A 259 SITE 5 AC2 24 CYS A 296 GLU A 400 PHE A 402 HOH A2397 SITE 6 AC2 24 HOH A2398 HOH A2795 HOH A2796 HOH A2797 SITE 1 AC3 28 ILE B 155 ALA B 157 PHE B 158 LYS B 182 SITE 2 AC3 28 GLY B 214 SER B 216 LEU B 220 PHE B 231 SITE 3 AC3 28 GLY B 233 SER B 234 THR B 237 GLN B 257 SITE 4 AC3 28 ALA B 258 ASP B 259 CYS B 296 GLU B 400 SITE 5 AC3 28 PHE B 402 HOH B2385 HOH B2724 HOH B2726 SITE 6 AC3 28 HOH B2727 HOH B2728 HOH B2729 HOH B2730 SITE 7 AC3 28 HOH B2731 HOH B2732 HOH B2733 HOH B2734 SITE 1 AC4 10 VAL B 100 PHE B 160 TRP B 163 LYS B 295 SITE 2 AC4 10 THR B 297 GLY B 477 ASN B 478 VAL B 479 SITE 3 AC4 10 HOH B2467 HOH B2735 SITE 1 AC5 9 ARG B 242 LEU B 254 VAL B 256 GLY B 492 SITE 2 AC5 9 GLY B 493 GLY B 494 HOH B2736 HOH B2737 SITE 3 AC5 9 HOH B2738 SITE 1 AC6 10 VAL A 100 PHE A 160 TRP A 163 LYS A 295 SITE 2 AC6 10 THR A 297 GLY A 477 ASN A 478 VAL A 479 SITE 3 AC6 10 HOH A2792 HOH A2793 CRYST1 58.240 67.810 77.510 111.22 90.45 113.51 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017170 0.007469 0.003389 0.00000 SCALE2 0.000000 0.016082 0.006980 0.00000 SCALE3 0.000000 0.000000 0.014065 0.00000