HEADER METAL BINDING PROTEIN 13-JAN-11 2Y5I TITLE S100Z FROM ZEBRAFISH IN COMPLEX WITH CALCIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: S100 CALCIUM BINDING PROTEIN Z; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: S100Z; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET22B KEYWDS METAL-BINDING PROTEIN, EF-HAND, CALCIUM REGULATION, OLIGOMERISATION, KEYWDS 2 NEURONAL DEVELOPMENT, SPINE2, STRUCTURAL PROTEOMICS IN EUROPE 2, KEYWDS 3 METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR O.V.MOROZ,I.B.BRONSTEIN,K.S.WILSON REVDAT 3 20-DEC-23 2Y5I 1 REMARK LINK REVDAT 2 24-AUG-11 2Y5I 1 JRNL REVDAT 1 27-JUL-11 2Y5I 0 JRNL AUTH O.V.MOROZ,I.B.BRONSTEIN,K.S.WILSON JRNL TITL THE CRYSTAL STRUCTURE OF ZEBRAFISH S100Z: IMPLICATIONS FOR JRNL TITL 2 CALCIUM-PROMOTED S100 PROTEIN OLIGOMERISATION. JRNL REF J.MOL.BIOL. V. 411 1072 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21756915 JRNL DOI 10.1016/J.JMB.2011.06.048 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0086 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 36265 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1909 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2298 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.1830 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4548 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 509 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : 1.50000 REMARK 3 B33 (A**2) : -1.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.207 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.111 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.656 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4790 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3176 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6468 ; 1.583 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7837 ; 0.980 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 620 ; 5.553 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 241 ;34.024 ;27.178 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 884 ;15.782 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ; 8.418 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 720 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5473 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 878 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 105 REMARK 3 ORIGIN FOR THE GROUP (A): 37.3085 26.3166 9.6343 REMARK 3 T TENSOR REMARK 3 T11: 0.0236 T22: 0.0740 REMARK 3 T33: 0.0159 T12: 0.0185 REMARK 3 T13: 0.0056 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 3.3780 L22: 1.0655 REMARK 3 L33: 1.9696 L12: -0.8027 REMARK 3 L13: -0.9791 L23: 0.1520 REMARK 3 S TENSOR REMARK 3 S11: -0.0573 S12: -0.4465 S13: 0.0364 REMARK 3 S21: 0.1092 S22: 0.1312 S23: -0.0042 REMARK 3 S31: 0.0085 S32: 0.0766 S33: -0.0740 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 105 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4946 25.9468 -9.6326 REMARK 3 T TENSOR REMARK 3 T11: 0.0051 T22: 0.0355 REMARK 3 T33: 0.0122 T12: -0.0029 REMARK 3 T13: -0.0077 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 3.3501 L22: 1.3191 REMARK 3 L33: 2.0632 L12: -0.0054 REMARK 3 L13: -0.9307 L23: 0.2687 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: 0.3118 S13: 0.0688 REMARK 3 S21: -0.0810 S22: 0.0108 S23: 0.1193 REMARK 3 S31: -0.0013 S32: -0.1905 S33: 0.0063 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 105 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7005 14.0986 -28.6308 REMARK 3 T TENSOR REMARK 3 T11: 0.1316 T22: 0.0796 REMARK 3 T33: 0.0481 T12: 0.0390 REMARK 3 T13: -0.0192 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 1.5025 L22: 5.7203 REMARK 3 L33: 0.8901 L12: 2.0471 REMARK 3 L13: -1.0707 L23: -2.0318 REMARK 3 S TENSOR REMARK 3 S11: -0.1298 S12: 0.2270 S13: -0.0573 REMARK 3 S21: -0.6573 S22: 0.1401 S23: 0.1485 REMARK 3 S31: 0.2053 S32: -0.1059 S33: -0.0103 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 105 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5123 11.9263 -10.5141 REMARK 3 T TENSOR REMARK 3 T11: 0.1183 T22: 0.1228 REMARK 3 T33: 0.0515 T12: 0.0039 REMARK 3 T13: -0.0168 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 3.4467 L22: 3.9487 REMARK 3 L33: 0.9782 L12: 2.8000 REMARK 3 L13: -1.5191 L23: -1.9498 REMARK 3 S TENSOR REMARK 3 S11: 0.2533 S12: -0.5406 S13: 0.0641 REMARK 3 S21: 0.5116 S22: -0.2506 S23: 0.0186 REMARK 3 S31: -0.2356 S32: 0.1662 S33: -0.0028 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 105 REMARK 3 ORIGIN FOR THE GROUP (A): 16.0934 -14.1853 -29.7734 REMARK 3 T TENSOR REMARK 3 T11: 0.0284 T22: 0.0077 REMARK 3 T33: 0.0266 T12: 0.0059 REMARK 3 T13: 0.0059 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.7254 L22: 2.5733 REMARK 3 L33: 1.6952 L12: -0.8390 REMARK 3 L13: 0.6840 L23: -0.6298 REMARK 3 S TENSOR REMARK 3 S11: -0.0709 S12: -0.1054 S13: 0.1268 REMARK 3 S21: 0.2092 S22: 0.0457 S23: 0.1003 REMARK 3 S31: -0.1527 S32: -0.0438 S33: 0.0252 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 105 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7556 -11.9921 -48.5417 REMARK 3 T TENSOR REMARK 3 T11: 0.0774 T22: 0.0661 REMARK 3 T33: 0.0384 T12: 0.0602 REMARK 3 T13: 0.0302 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 2.1336 L22: 2.4401 REMARK 3 L33: 1.6460 L12: -1.4475 REMARK 3 L13: 0.5442 L23: -0.7199 REMARK 3 S TENSOR REMARK 3 S11: 0.2427 S12: 0.2967 S13: 0.0109 REMARK 3 S21: -0.3119 S22: -0.2052 S23: 0.0354 REMARK 3 S31: -0.0124 S32: -0.0012 S33: -0.0375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2Y5I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1290046989. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38644 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 66.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 85.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3CGA REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE; 10% PEG 1.5K; REMARK 280 0.2M CACL2, 20% ISOPROPANOL., PH 5.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 37.80550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 66.12500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.80550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 66.12500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D2023 LIES ON A SPECIAL POSITION. REMARK 375 HOH E2034 LIES ON A SPECIAL POSITION. REMARK 375 HOH F2021 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 LYS B 99 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 465 MET E 1 REMARK 465 LYS E 99 REMARK 465 MET F 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 99 CD CE NZ REMARK 470 GLU B 36 CD OE1 OE2 REMARK 470 LYS B 50 CE NZ REMARK 470 LYS B 66 CD CE NZ REMARK 470 GLU B 92 CD OE1 OE2 REMARK 470 LYS C 26 CG CD CE NZ REMARK 470 LYS C 35 CD CE NZ REMARK 470 THR C 43 OG1 CG2 REMARK 470 LYS C 50 CG CD CE NZ REMARK 470 LEU C 54 CB CG CD1 CD2 REMARK 470 GLU C 92 CD OE1 OE2 REMARK 470 LYS C 96 CD CE NZ REMARK 470 LYS C 99 CG CD CE NZ REMARK 470 LYS D 26 CD CE NZ REMARK 470 THR D 43 CB OG1 CG2 REMARK 470 LYS D 50 CB CG CD CE NZ REMARK 470 LEU D 54 CG CD1 CD2 REMARK 470 LYS D 66 CD CE NZ REMARK 470 LYS D 99 CD CE NZ REMARK 470 LYS E 26 CE NZ REMARK 470 GLU E 36 CD OE1 OE2 REMARK 470 LYS E 50 CE NZ REMARK 470 MET E 53 CG SD CE REMARK 470 GLN E 94 CD OE1 NE2 REMARK 470 SER E 98 CB OG REMARK 470 MET F 53 CG SD CE REMARK 470 LYS F 96 CD CE NZ REMARK 470 LYS F 99 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 88 O HOH A 2087 1.82 REMARK 500 OD1 ASP F 88 O HOH F 2067 1.86 REMARK 500 OD1 ASN C 73 O HOH C 2065 1.96 REMARK 500 NE2 GLN D 49 O HOH D 2044 1.99 REMARK 500 OD1 ASN B 73 O HOH B 2083 2.00 REMARK 500 NE2 GLN C 49 O HOH C 2046 2.04 REMARK 500 OD1 ASN A 73 O HOH A 2079 2.08 REMARK 500 OE2 GLU C 6 O HOH C 2004 2.09 REMARK 500 OD1 ASP B 88 O HOH B 2090 2.12 REMARK 500 OD1 ASN D 73 O HOH D 2061 2.13 REMARK 500 O HOH E 2079 O HOH E 2082 2.13 REMARK 500 OE1 GLU C 36 O HOH C 2037 2.15 REMARK 500 OD1 ASP C 88 O HOH C 2073 2.16 REMARK 500 OD1 ASN B 73 O HOH B 2082 2.16 REMARK 500 OD1 ASP D 88 O HOH D 2067 2.18 REMARK 500 O HOH B 2042 O HOH B 2095 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH F 2010 O HOH F 2010 2555 1.55 REMARK 500 O HOH B 2033 O HOH E 2021 2655 1.75 REMARK 500 O HOH B 2027 O HOH E 2032 2655 2.13 REMARK 500 CG GLU E 36 O HOH B 2039 2655 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 97 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 97 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG D 97 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2041 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH E2013 DISTANCE = 6.36 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 20 O REMARK 620 2 GLU A 23 O 108.0 REMARK 620 3 ASP A 25 O 78.4 88.0 REMARK 620 4 LYS A 28 O 87.9 158.4 80.8 REMARK 620 5 GLU A 33 OE1 92.3 113.6 158.4 79.4 REMARK 620 6 GLU A 33 OE2 72.8 77.2 141.3 122.6 49.2 REMARK 620 7 HOH A2076 O 169.9 79.4 95.3 83.3 90.9 116.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 63 OD1 REMARK 620 2 ASN A 65 OD1 80.6 REMARK 620 3 ASP A 67 OD1 80.4 82.8 REMARK 620 4 GLU A 69 O 80.5 155.5 78.8 REMARK 620 5 GLU A 74 OE1 125.0 125.3 142.0 78.7 REMARK 620 6 GLU A 74 OE2 99.0 76.7 159.3 121.7 54.0 REMARK 620 7 HOH A2072 O 157.7 92.3 77.7 99.4 76.3 99.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 20 O REMARK 620 2 GLU B 23 O 108.1 REMARK 620 3 ASP B 25 O 79.8 89.3 REMARK 620 4 LYS B 28 O 88.7 157.8 79.5 REMARK 620 5 GLU B 33 OE1 93.4 111.9 158.8 80.4 REMARK 620 6 GLU B 33 OE2 72.1 76.0 141.8 124.1 50.4 REMARK 620 7 HOH B2077 O 172.1 79.0 97.2 83.5 86.9 113.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 63 OD1 REMARK 620 2 ASN B 65 OD1 82.5 REMARK 620 3 ASP B 67 OD1 82.6 83.1 REMARK 620 4 GLU B 69 O 80.0 158.3 81.9 REMARK 620 5 GLU B 74 OE1 119.8 120.5 147.6 79.7 REMARK 620 6 GLU B 74 OE2 94.9 74.1 157.2 120.1 51.4 REMARK 620 7 HOH B2073 O 159.3 87.7 78.2 104.5 80.9 100.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 20 O REMARK 620 2 GLU C 23 O 108.4 REMARK 620 3 ASP C 25 O 79.0 88.3 REMARK 620 4 LYS C 28 O 87.5 159.3 81.7 REMARK 620 5 GLU C 33 OE1 95.9 108.9 162.7 81.6 REMARK 620 6 GLU C 33 OE2 76.7 74.4 143.6 123.4 47.7 REMARK 620 7 HOH C2060 O 172.6 77.9 97.7 85.5 85.3 109.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 63 OD1 REMARK 620 2 ASN C 65 OD1 79.3 REMARK 620 3 ASP C 67 OD1 81.5 83.1 REMARK 620 4 GLU C 69 O 83.8 159.2 82.3 REMARK 620 5 GLU C 74 OE1 121.0 122.6 146.7 76.8 REMARK 620 6 GLU C 74 OE2 96.0 74.4 157.4 119.9 52.2 REMARK 620 7 HOH C2055 O 157.9 88.1 79.0 103.6 81.1 98.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 20 O REMARK 620 2 GLU D 23 O 107.5 REMARK 620 3 ASP D 25 O 81.0 89.5 REMARK 620 4 LYS D 28 O 88.8 159.3 80.4 REMARK 620 5 GLU D 33 OE1 97.4 107.8 162.1 81.8 REMARK 620 6 GLU D 33 OE2 73.3 75.6 144.4 122.4 48.8 REMARK 620 7 HOH D2058 O 170.7 80.6 94.8 82.3 84.1 113.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 63 OD1 REMARK 620 2 ASN D 65 OD1 77.0 REMARK 620 3 ASP D 67 OD1 79.9 81.3 REMARK 620 4 GLU D 69 O 82.8 155.9 82.5 REMARK 620 5 GLU D 74 OE2 93.2 77.2 158.4 117.2 REMARK 620 6 GLU D 74 OE1 121.9 124.4 147.6 77.5 52.3 REMARK 620 7 HOH D2053 O 157.9 91.5 79.8 103.0 102.7 80.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER E 20 O REMARK 620 2 GLU E 23 O 108.7 REMARK 620 3 ASP E 25 O 80.4 89.0 REMARK 620 4 LYS E 28 O 87.6 159.6 81.5 REMARK 620 5 GLU E 33 OE2 72.4 76.5 142.6 121.4 REMARK 620 6 GLU E 33 OE1 93.1 110.7 160.3 79.6 48.6 REMARK 620 7 HOH E2071 O 172.6 77.6 96.0 85.4 113.6 88.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 63 OD1 REMARK 620 2 ASN E 65 OD1 77.6 REMARK 620 3 ASP E 67 OD1 82.6 83.2 REMARK 620 4 GLU E 69 O 83.0 155.8 80.0 REMARK 620 5 GLU E 74 OE1 118.7 123.5 147.4 78.7 REMARK 620 6 GLU E 74 OE2 95.5 73.9 156.9 122.8 52.1 REMARK 620 7 HOH E2065 O 159.0 90.0 79.2 103.8 82.2 97.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA F 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER F 20 O REMARK 620 2 GLU F 23 O 107.4 REMARK 620 3 ASP F 25 O 77.8 87.6 REMARK 620 4 LYS F 28 O 88.2 158.7 81.4 REMARK 620 5 GLU F 33 OE2 72.5 76.3 139.8 123.4 REMARK 620 6 GLU F 33 OE1 94.4 109.8 162.4 82.7 48.1 REMARK 620 7 HOH F2056 O 171.6 78.8 97.0 84.4 115.0 88.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA F 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 63 OD1 REMARK 620 2 ASN F 65 OD1 75.9 REMARK 620 3 ASP F 67 OD1 82.4 84.0 REMARK 620 4 GLU F 69 O 83.4 154.7 78.8 REMARK 620 5 GLU F 74 OE1 118.0 123.4 147.8 79.3 REMARK 620 6 GLU F 74 OE2 91.6 74.7 158.8 120.9 51.9 REMARK 620 7 HOH F2053 O 158.9 94.9 77.7 99.4 82.9 104.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA F 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA F 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 1100 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA C 1100 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA D 1100 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA E 1099 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA F 1100 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA F 1101 DBREF 2Y5I A 1 99 UNP Q503K9 Q503K9_DANRE 1 99 DBREF 2Y5I B 1 99 UNP Q503K9 Q503K9_DANRE 1 99 DBREF 2Y5I C 1 99 UNP Q503K9 Q503K9_DANRE 1 99 DBREF 2Y5I D 1 99 UNP Q503K9 Q503K9_DANRE 1 99 DBREF 2Y5I E 1 99 UNP Q503K9 Q503K9_DANRE 1 99 DBREF 2Y5I F 1 99 UNP Q503K9 Q503K9_DANRE 1 99 SEQRES 1 A 99 MET PRO SER LYS LEU GLU GLY ALA MET ASP ALA LEU ILE SEQRES 2 A 99 THR VAL PHE HIS ASN TYR SER GLY SER GLU GLY ASP LYS SEQRES 3 A 99 TYR LYS LEU SER LYS GLY GLU LEU LYS GLU LEU LEU ASN SEQRES 4 A 99 ALA GLU LEU THR ASP PHE LEU MET SER GLN LYS ASP PRO SEQRES 5 A 99 MET LEU VAL GLU LYS ILE MET ASN ASP LEU ASP SER ASN SEQRES 6 A 99 LYS ASP ASN GLU VAL ASP PHE ASN GLU PHE VAL VAL LEU SEQRES 7 A 99 VAL ALA ALA LEU THR VAL ALA CYS ASN ASP PHE PHE GLN SEQRES 8 A 99 GLU GLN GLN LYS LYS ARG SER LYS SEQRES 1 B 99 MET PRO SER LYS LEU GLU GLY ALA MET ASP ALA LEU ILE SEQRES 2 B 99 THR VAL PHE HIS ASN TYR SER GLY SER GLU GLY ASP LYS SEQRES 3 B 99 TYR LYS LEU SER LYS GLY GLU LEU LYS GLU LEU LEU ASN SEQRES 4 B 99 ALA GLU LEU THR ASP PHE LEU MET SER GLN LYS ASP PRO SEQRES 5 B 99 MET LEU VAL GLU LYS ILE MET ASN ASP LEU ASP SER ASN SEQRES 6 B 99 LYS ASP ASN GLU VAL ASP PHE ASN GLU PHE VAL VAL LEU SEQRES 7 B 99 VAL ALA ALA LEU THR VAL ALA CYS ASN ASP PHE PHE GLN SEQRES 8 B 99 GLU GLN GLN LYS LYS ARG SER LYS SEQRES 1 C 99 MET PRO SER LYS LEU GLU GLY ALA MET ASP ALA LEU ILE SEQRES 2 C 99 THR VAL PHE HIS ASN TYR SER GLY SER GLU GLY ASP LYS SEQRES 3 C 99 TYR LYS LEU SER LYS GLY GLU LEU LYS GLU LEU LEU ASN SEQRES 4 C 99 ALA GLU LEU THR ASP PHE LEU MET SER GLN LYS ASP PRO SEQRES 5 C 99 MET LEU VAL GLU LYS ILE MET ASN ASP LEU ASP SER ASN SEQRES 6 C 99 LYS ASP ASN GLU VAL ASP PHE ASN GLU PHE VAL VAL LEU SEQRES 7 C 99 VAL ALA ALA LEU THR VAL ALA CYS ASN ASP PHE PHE GLN SEQRES 8 C 99 GLU GLN GLN LYS LYS ARG SER LYS SEQRES 1 D 99 MET PRO SER LYS LEU GLU GLY ALA MET ASP ALA LEU ILE SEQRES 2 D 99 THR VAL PHE HIS ASN TYR SER GLY SER GLU GLY ASP LYS SEQRES 3 D 99 TYR LYS LEU SER LYS GLY GLU LEU LYS GLU LEU LEU ASN SEQRES 4 D 99 ALA GLU LEU THR ASP PHE LEU MET SER GLN LYS ASP PRO SEQRES 5 D 99 MET LEU VAL GLU LYS ILE MET ASN ASP LEU ASP SER ASN SEQRES 6 D 99 LYS ASP ASN GLU VAL ASP PHE ASN GLU PHE VAL VAL LEU SEQRES 7 D 99 VAL ALA ALA LEU THR VAL ALA CYS ASN ASP PHE PHE GLN SEQRES 8 D 99 GLU GLN GLN LYS LYS ARG SER LYS SEQRES 1 E 99 MET PRO SER LYS LEU GLU GLY ALA MET ASP ALA LEU ILE SEQRES 2 E 99 THR VAL PHE HIS ASN TYR SER GLY SER GLU GLY ASP LYS SEQRES 3 E 99 TYR LYS LEU SER LYS GLY GLU LEU LYS GLU LEU LEU ASN SEQRES 4 E 99 ALA GLU LEU THR ASP PHE LEU MET SER GLN LYS ASP PRO SEQRES 5 E 99 MET LEU VAL GLU LYS ILE MET ASN ASP LEU ASP SER ASN SEQRES 6 E 99 LYS ASP ASN GLU VAL ASP PHE ASN GLU PHE VAL VAL LEU SEQRES 7 E 99 VAL ALA ALA LEU THR VAL ALA CYS ASN ASP PHE PHE GLN SEQRES 8 E 99 GLU GLN GLN LYS LYS ARG SER LYS SEQRES 1 F 99 MET PRO SER LYS LEU GLU GLY ALA MET ASP ALA LEU ILE SEQRES 2 F 99 THR VAL PHE HIS ASN TYR SER GLY SER GLU GLY ASP LYS SEQRES 3 F 99 TYR LYS LEU SER LYS GLY GLU LEU LYS GLU LEU LEU ASN SEQRES 4 F 99 ALA GLU LEU THR ASP PHE LEU MET SER GLN LYS ASP PRO SEQRES 5 F 99 MET LEU VAL GLU LYS ILE MET ASN ASP LEU ASP SER ASN SEQRES 6 F 99 LYS ASP ASN GLU VAL ASP PHE ASN GLU PHE VAL VAL LEU SEQRES 7 F 99 VAL ALA ALA LEU THR VAL ALA CYS ASN ASP PHE PHE GLN SEQRES 8 F 99 GLU GLN GLN LYS LYS ARG SER LYS HET CA A 101 1 HET CA A 102 1 HET IPA A1100 4 HET CA B 101 1 HET CA B 102 1 HET CA C 101 1 HET CA C 102 1 HET IPA C1100 4 HET CA D 101 1 HET CA D 102 1 HET IPA D1100 4 HET CA E 101 1 HET CA E 102 1 HET IPA E1099 4 HET CA F 101 1 HET CA F 102 1 HET IPA F1100 4 HET IPA F1101 4 HETNAM CA CALCIUM ION HETNAM IPA ISOPROPYL ALCOHOL HETSYN IPA 2-PROPANOL FORMUL 7 CA 12(CA 2+) FORMUL 9 IPA 6(C3 H8 O) FORMUL 25 HOH *509(H2 O) HELIX 1 1 SER A 3 GLY A 21 1 19 HELIX 2 2 SER A 30 LEU A 42 1 13 HELIX 3 3 THR A 43 MET A 47 5 5 HELIX 4 4 ASP A 51 ASP A 63 1 13 HELIX 5 5 PHE A 72 SER A 98 1 27 HELIX 6 6 SER B 3 GLY B 21 1 19 HELIX 7 7 SER B 30 LEU B 42 1 13 HELIX 8 8 THR B 43 MET B 47 5 5 HELIX 9 9 ASP B 51 ASP B 63 1 13 HELIX 10 10 PHE B 72 SER B 98 1 27 HELIX 11 11 SER C 3 GLY C 21 1 19 HELIX 12 12 SER C 30 LEU C 42 1 13 HELIX 13 13 THR C 43 MET C 47 5 5 HELIX 14 14 ASP C 51 ASP C 63 1 13 HELIX 15 15 PHE C 72 LYS C 99 1 28 HELIX 16 16 SER D 3 GLY D 21 1 19 HELIX 17 17 SER D 30 LEU D 42 1 13 HELIX 18 18 THR D 43 MET D 47 5 5 HELIX 19 19 ASP D 51 ASP D 63 1 13 HELIX 20 20 PHE D 72 LYS D 99 1 28 HELIX 21 21 SER E 3 GLY E 21 1 19 HELIX 22 22 SER E 30 LEU E 42 1 13 HELIX 23 23 THR E 43 MET E 47 5 5 HELIX 24 24 ASP E 51 ASP E 63 1 13 HELIX 25 25 PHE E 72 SER E 98 1 27 HELIX 26 26 SER F 3 GLY F 21 1 19 HELIX 27 27 SER F 30 LEU F 42 1 13 HELIX 28 28 THR F 43 MET F 47 5 5 HELIX 29 29 ASP F 51 ASP F 63 1 13 HELIX 30 30 PHE F 72 LYS F 99 1 28 SHEET 1 AA 2 LYS A 28 LEU A 29 0 SHEET 2 AA 2 VAL A 70 ASP A 71 -1 O VAL A 70 N LEU A 29 SHEET 1 BA 2 LYS B 28 LEU B 29 0 SHEET 2 BA 2 VAL B 70 ASP B 71 -1 O VAL B 70 N LEU B 29 SHEET 1 CA 2 LYS C 28 LEU C 29 0 SHEET 2 CA 2 VAL C 70 ASP C 71 -1 O VAL C 70 N LEU C 29 SHEET 1 DA 2 LYS D 28 LEU D 29 0 SHEET 2 DA 2 VAL D 70 ASP D 71 -1 O VAL D 70 N LEU D 29 SHEET 1 EA 2 LYS E 28 LEU E 29 0 SHEET 2 EA 2 VAL E 70 ASP E 71 -1 O VAL E 70 N LEU E 29 SHEET 1 FA 2 LYS F 28 LEU F 29 0 SHEET 2 FA 2 VAL F 70 ASP F 71 -1 O VAL F 70 N LEU F 29 LINK O SER A 20 CA CA A 101 1555 1555 2.31 LINK O GLU A 23 CA CA A 101 1555 1555 2.33 LINK O ASP A 25 CA CA A 101 1555 1555 2.44 LINK O LYS A 28 CA CA A 101 1555 1555 2.36 LINK OE1 GLU A 33 CA CA A 101 1555 1555 2.33 LINK OE2 GLU A 33 CA CA A 101 1555 1555 2.82 LINK OD1 ASP A 63 CA CA A 102 1555 1555 2.28 LINK OD1 ASN A 65 CA CA A 102 1555 1555 2.37 LINK OD1 ASP A 67 CA CA A 102 1555 1555 2.44 LINK O GLU A 69 CA CA A 102 1555 1555 2.35 LINK OE1 GLU A 74 CA CA A 102 1555 1555 2.35 LINK OE2 GLU A 74 CA CA A 102 1555 1555 2.48 LINK CA CA A 101 O HOH A2076 1555 1555 2.37 LINK CA CA A 102 O HOH A2072 1555 1555 2.39 LINK O SER B 20 CA CA B 101 1555 1555 2.39 LINK O GLU B 23 CA CA B 101 1555 1555 2.38 LINK O ASP B 25 CA CA B 101 1555 1555 2.45 LINK O LYS B 28 CA CA B 101 1555 1555 2.31 LINK OE1 GLU B 33 CA CA B 101 1555 1555 2.31 LINK OE2 GLU B 33 CA CA B 101 1555 1555 2.78 LINK OD1 ASP B 63 CA CA B 102 1555 1555 2.26 LINK OD1 ASN B 65 CA CA B 102 1555 1555 2.32 LINK OD1 ASP B 67 CA CA B 102 1555 1555 2.33 LINK O GLU B 69 CA CA B 102 1555 1555 2.39 LINK OE1 GLU B 74 CA CA B 102 1555 1555 2.43 LINK OE2 GLU B 74 CA CA B 102 1555 1555 2.62 LINK CA CA B 101 O HOH B2077 1555 1555 2.34 LINK CA CA B 102 O HOH B2073 1555 1555 2.50 LINK O SER C 20 CA CA C 101 1555 1555 2.35 LINK O GLU C 23 CA CA C 101 1555 1555 2.41 LINK O ASP C 25 CA CA C 101 1555 1555 2.35 LINK O LYS C 28 CA CA C 101 1555 1555 2.35 LINK OE1 GLU C 33 CA CA C 101 1555 1555 2.37 LINK OE2 GLU C 33 CA CA C 101 1555 1555 2.87 LINK OD1 ASP C 63 CA CA C 102 1555 1555 2.20 LINK OD1 ASN C 65 CA CA C 102 1555 1555 2.30 LINK OD1 ASP C 67 CA CA C 102 1555 1555 2.36 LINK O GLU C 69 CA CA C 102 1555 1555 2.30 LINK OE1 GLU C 74 CA CA C 102 1555 1555 2.48 LINK OE2 GLU C 74 CA CA C 102 1555 1555 2.61 LINK CA CA C 101 O HOH C2060 1555 1555 2.40 LINK CA CA C 102 O HOH C2055 1555 1555 2.42 LINK O SER D 20 CA CA D 101 1555 1555 2.37 LINK O GLU D 23 CA CA D 101 1555 1555 2.31 LINK O ASP D 25 CA CA D 101 1555 1555 2.39 LINK O LYS D 28 CA CA D 101 1555 1555 2.31 LINK OE1 GLU D 33 CA CA D 101 1555 1555 2.31 LINK OE2 GLU D 33 CA CA D 101 1555 1555 2.85 LINK OD1 ASP D 63 CA CA D 102 1555 1555 2.31 LINK OD1 ASN D 65 CA CA D 102 1555 1555 2.36 LINK OD1 ASP D 67 CA CA D 102 1555 1555 2.38 LINK O GLU D 69 CA CA D 102 1555 1555 2.43 LINK OE2 GLU D 74 CA CA D 102 1555 1555 2.59 LINK OE1 GLU D 74 CA CA D 102 1555 1555 2.47 LINK CA CA D 101 O HOH D2058 1555 1555 2.36 LINK CA CA D 102 O HOH D2053 1555 1555 2.34 LINK O SER E 20 CA CA E 101 1555 1555 2.29 LINK O GLU E 23 CA CA E 101 1555 1555 2.45 LINK O ASP E 25 CA CA E 101 1555 1555 2.45 LINK O LYS E 28 CA CA E 101 1555 1555 2.36 LINK OE2 GLU E 33 CA CA E 101 1555 1555 2.81 LINK OE1 GLU E 33 CA CA E 101 1555 1555 2.36 LINK OD1 ASP E 63 CA CA E 102 1555 1555 2.36 LINK OD1 ASN E 65 CA CA E 102 1555 1555 2.34 LINK OD1 ASP E 67 CA CA E 102 1555 1555 2.33 LINK O GLU E 69 CA CA E 102 1555 1555 2.35 LINK OE1 GLU E 74 CA CA E 102 1555 1555 2.43 LINK OE2 GLU E 74 CA CA E 102 1555 1555 2.62 LINK CA CA E 101 O HOH E2071 1555 1555 2.30 LINK CA CA E 102 O HOH E2065 1555 1555 2.42 LINK O SER F 20 CA CA F 101 1555 1555 2.39 LINK O GLU F 23 CA CA F 101 1555 1555 2.42 LINK O ASP F 25 CA CA F 101 1555 1555 2.45 LINK O LYS F 28 CA CA F 101 1555 1555 2.22 LINK OE2 GLU F 33 CA CA F 101 1555 1555 2.81 LINK OE1 GLU F 33 CA CA F 101 1555 1555 2.35 LINK OD1 ASP F 63 CA CA F 102 1555 1555 2.31 LINK OD1 ASN F 65 CA CA F 102 1555 1555 2.32 LINK OD1 ASP F 67 CA CA F 102 1555 1555 2.37 LINK O GLU F 69 CA CA F 102 1555 1555 2.36 LINK OE1 GLU F 74 CA CA F 102 1555 1555 2.34 LINK OE2 GLU F 74 CA CA F 102 1555 1555 2.60 LINK CA CA F 101 O HOH F2056 1555 1555 2.40 LINK CA CA F 102 O HOH F2053 1555 1555 2.33 SITE 1 AC1 6 SER A 20 GLU A 23 ASP A 25 LYS A 28 SITE 2 AC1 6 GLU A 33 HOH A2076 SITE 1 AC2 6 ASP A 63 ASN A 65 ASP A 67 GLU A 69 SITE 2 AC2 6 GLU A 74 HOH A2072 SITE 1 AC3 6 SER B 20 GLU B 23 ASP B 25 LYS B 28 SITE 2 AC3 6 GLU B 33 HOH B2077 SITE 1 AC4 6 ASP B 63 ASN B 65 ASP B 67 GLU B 69 SITE 2 AC4 6 GLU B 74 HOH B2073 SITE 1 AC5 6 SER C 20 GLU C 23 ASP C 25 LYS C 28 SITE 2 AC5 6 GLU C 33 HOH C2060 SITE 1 AC6 6 ASP C 63 ASN C 65 ASP C 67 GLU C 69 SITE 2 AC6 6 GLU C 74 HOH C2055 SITE 1 AC7 6 SER D 20 GLU D 23 ASP D 25 LYS D 28 SITE 2 AC7 6 GLU D 33 HOH D2058 SITE 1 AC8 6 ASP D 63 ASN D 65 ASP D 67 GLU D 69 SITE 2 AC8 6 GLU D 74 HOH D2053 SITE 1 AC9 6 SER E 20 GLU E 23 ASP E 25 LYS E 28 SITE 2 AC9 6 GLU E 33 HOH E2071 SITE 1 BC1 6 ASP E 63 ASN E 65 ASP E 67 GLU E 69 SITE 2 BC1 6 GLU E 74 HOH E2065 SITE 1 BC2 6 SER F 20 GLU F 23 ASP F 25 LYS F 28 SITE 2 BC2 6 GLU F 33 HOH F2056 SITE 1 BC3 6 ASP F 63 ASN F 65 ASP F 67 GLU F 69 SITE 2 BC3 6 GLU F 74 HOH F2053 SITE 1 BC4 2 ARG A 97 HOH A2090 SITE 1 BC5 3 ARG C 97 HOH C2077 ILE E 58 SITE 1 BC6 2 PHE B 90 CYS D 86 SITE 1 BC7 4 CYS C 86 HOH C2018 PHE E 89 PHE E 90 SITE 1 BC8 5 CYS A 86 PHE A 89 CYS F 86 PHE F 89 SITE 2 BC8 5 PHE F 90 SITE 1 BC9 3 ILE A 58 ARG F 97 HOH F2068 CRYST1 75.611 132.250 58.209 90.00 90.00 90.00 P 21 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013226 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007561 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017179 0.00000