data_2Y6G # _entry.id 2Y6G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2Y6G PDBE EBI-47060 WWPDB D_1290047060 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2Y64 unspecified 'XYLOPENTAOSE BINDING MUTATED (X-2 L110F) CBM4-2 CARBOHYDRATE BINDING MODULE FROM A THERMOSTABLE RHODOTHERMUS MARINUS XYLANASE' PDB 2Y6H unspecified 'X-2 L110F CBM4-2 CARBOHYDRATE BINDING MODULE FROM A THERMOSTABLE RHODOTHERMUS MARINUS XYLANASE' PDB 2Y6J unspecified 'X-2 ENGINEERED MUTATED CBM4-2 CARBOHYDRATE BINDING MODULE FROM A THERMOSTABLE RHODOTHERMUS MARINUS XYLANASE' PDB 2Y6K unspecified 'XYLOTETRAOSE BOUND TO X-2 ENGINEERED MUTATED CBM4-2 CARBOHYDRATE BINDING MODULE FROM A THERMOSTABLE RHODOTHERMUS MARINUS XYLANASE' PDB 2Y6L unspecified 'XYLOPENTAOSE BINDING X-2 ENGINEERED MUTATED CBM4-2 CARBOHYDRATE BINDING MODULE FROM A THERMOSTABLE RHODOTHERMUS MARINUS XYLANASE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Y6G _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-01-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'von Schantz, L.' 1 ? 'Hakansson, M.' 2 ? 'Logan, D.T.' 3 ? 'Walse, B.' 4 ? 'Osterlin, J.' 5 ? 'Nordberg-Karlsson, E.' 6 ? 'Ohlin, M.' 7 ? # _citation.id primary _citation.title 'Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules.' _citation.journal_abbrev Glycobiology _citation.journal_volume 22 _citation.page_first 948 _citation.page_last 961 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1460-2423 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22434778 _citation.pdbx_database_id_DOI 10.1093/glycob/cws063 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'von Schantz, L.' 1 ? primary 'Hakansson, M.' 2 ? primary 'Logan, D.T.' 3 ? primary 'Walse, B.' 4 ? primary 'Osterlin, J.' 5 ? primary 'Nordberg-Karlsson, E.' 6 ? primary 'Ohlin, M.' 7 ? # _cell.entry_id 2Y6G _cell.length_a 48.560 _cell.length_b 49.720 _cell.length_c 62.520 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Y6G _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man XYLANASE 17939.734 1 3.2.1.8 YES ? ? 2 branched man 'beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose' 504.438 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 water nat water 18.015 204 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 CBM4-2 2 beta-cellotriose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLVANINGGFESTPAGVVTDLAEGVEGWDLNVGSSVTNPPVFEVLETSDAPEGNKVLAVTVNGVGNNPFNIQATALPVNV RPGVTYTYTIRARAEQDGAVVSFTVGNQSFDEYGRLHHQQITTEWQPFTFEFTVSDQETVIRAPIHFGYAANVGNTIYID GLAIVDL ; _entity_poly.pdbx_seq_one_letter_code_can ;MLVANINGGFESTPAGVVTDLAEGVEGWDLNVGSSVTNPPVFEVLETSDAPEGNKVLAVTVNGVGNNPFNIQATALPVNV RPGVTYTYTIRARAEQDGAVVSFTVGNQSFDEYGRLHHQQITTEWQPFTFEFTVSDQETVIRAPIHFGYAANVGNTIYID GLAIVDL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 VAL n 1 4 ALA n 1 5 ASN n 1 6 ILE n 1 7 ASN n 1 8 GLY n 1 9 GLY n 1 10 PHE n 1 11 GLU n 1 12 SER n 1 13 THR n 1 14 PRO n 1 15 ALA n 1 16 GLY n 1 17 VAL n 1 18 VAL n 1 19 THR n 1 20 ASP n 1 21 LEU n 1 22 ALA n 1 23 GLU n 1 24 GLY n 1 25 VAL n 1 26 GLU n 1 27 GLY n 1 28 TRP n 1 29 ASP n 1 30 LEU n 1 31 ASN n 1 32 VAL n 1 33 GLY n 1 34 SER n 1 35 SER n 1 36 VAL n 1 37 THR n 1 38 ASN n 1 39 PRO n 1 40 PRO n 1 41 VAL n 1 42 PHE n 1 43 GLU n 1 44 VAL n 1 45 LEU n 1 46 GLU n 1 47 THR n 1 48 SER n 1 49 ASP n 1 50 ALA n 1 51 PRO n 1 52 GLU n 1 53 GLY n 1 54 ASN n 1 55 LYS n 1 56 VAL n 1 57 LEU n 1 58 ALA n 1 59 VAL n 1 60 THR n 1 61 VAL n 1 62 ASN n 1 63 GLY n 1 64 VAL n 1 65 GLY n 1 66 ASN n 1 67 ASN n 1 68 PRO n 1 69 PHE n 1 70 ASN n 1 71 ILE n 1 72 GLN n 1 73 ALA n 1 74 THR n 1 75 ALA n 1 76 LEU n 1 77 PRO n 1 78 VAL n 1 79 ASN n 1 80 VAL n 1 81 ARG n 1 82 PRO n 1 83 GLY n 1 84 VAL n 1 85 THR n 1 86 TYR n 1 87 THR n 1 88 TYR n 1 89 THR n 1 90 ILE n 1 91 ARG n 1 92 ALA n 1 93 ARG n 1 94 ALA n 1 95 GLU n 1 96 GLN n 1 97 ASP n 1 98 GLY n 1 99 ALA n 1 100 VAL n 1 101 VAL n 1 102 SER n 1 103 PHE n 1 104 THR n 1 105 VAL n 1 106 GLY n 1 107 ASN n 1 108 GLN n 1 109 SER n 1 110 PHE n 1 111 ASP n 1 112 GLU n 1 113 TYR n 1 114 GLY n 1 115 ARG n 1 116 LEU n 1 117 HIS n 1 118 HIS n 1 119 GLN n 1 120 GLN n 1 121 ILE n 1 122 THR n 1 123 THR n 1 124 GLU n 1 125 TRP n 1 126 GLN n 1 127 PRO n 1 128 PHE n 1 129 THR n 1 130 PHE n 1 131 GLU n 1 132 PHE n 1 133 THR n 1 134 VAL n 1 135 SER n 1 136 ASP n 1 137 GLN n 1 138 GLU n 1 139 THR n 1 140 VAL n 1 141 ILE n 1 142 ARG n 1 143 ALA n 1 144 PRO n 1 145 ILE n 1 146 HIS n 1 147 PHE n 1 148 GLY n 1 149 TYR n 1 150 ALA n 1 151 ALA n 1 152 ASN n 1 153 VAL n 1 154 GLY n 1 155 ASN n 1 156 THR n 1 157 ILE n 1 158 TYR n 1 159 ILE n 1 160 ASP n 1 161 GLY n 1 162 LEU n 1 163 ALA n 1 164 ILE n 1 165 VAL n 1 166 ASP n 1 167 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'RHODOTHERMUS MARINUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 29549 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 83333 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain K-12 _entity_src_gen.pdbx_host_org_variant 'T7 EXPRESS' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET22B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6V8M0_RHOMR _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q6V8M0 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2Y6G _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6V8M0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 165 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 166 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2Y6G MET A 1 ? UNP Q6V8M0 ? ? 'expression tag' 1 1 1 2Y6G PHE A 69 ? UNP Q6V8M0 TRP 68 'engineered mutation' 69 2 1 2Y6G ASN A 70 ? UNP Q6V8M0 ASP 69 'engineered mutation' 70 3 1 2Y6G GLN A 72 ? UNP Q6V8M0 GLU 71 'engineered mutation' 72 4 1 2Y6G LEU A 76 ? UNP Q6V8M0 PHE 75 'engineered mutation' 76 5 1 2Y6G ARG A 91 ? UNP Q6V8M0 TRP 90 'engineered mutation' 91 6 1 2Y6G ASP A 111 ? UNP Q6V8M0 GLN 110 'engineered mutation' 111 7 1 2Y6G HIS A 118 ? UNP Q6V8M0 GLU 117 'engineered mutation' 118 8 1 2Y6G LEU A 167 ? UNP Q6V8M0 ? ? 'cloning artifact' 167 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose ? 'C6 H12 O6' 180.156 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2Y6G _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 42 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M MIB BUFFER PH 6.0, 20 % PEG 1500' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARRESEARCH SX-165' _diffrn_detector.pdbx_collection_date 2010-05-05 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GERMANIUM CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.04 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I911-2' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I911-2 _diffrn_source.pdbx_wavelength 1.04 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2Y6G _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 1.30 _reflns.number_obs 36185 _reflns.number_all ? _reflns.percent_possible_obs 95.4 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.0 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.33 _reflns_shell.percent_possible_all 91.9 _reflns_shell.Rmerge_I_obs 0.47 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.20 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2Y6G _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 34388 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 90.7 _refine.ls_R_factor_obs 0.132 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.183 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 1797 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2Y6H' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1268 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 204 _refine_hist.number_atoms_total 1508 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.03 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes ? ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr ? ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 2Y6G _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.132 _pdbx_refine.free_R_factor_no_cutoff 0.183 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 1797 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 26493 # _struct.entry_id 2Y6G _struct.title 'Cellopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase' _struct.pdbx_descriptor 'XYLANASE (E.C.3.2.1.8)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Y6G _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 67 ? PHE A 69 ? ASN A 67 PHE A 69 5 ? 3 HELX_P HELX_P2 2 TYR A 149 ? VAL A 153 ? TYR A 149 VAL A 153 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B BGC . O4 ? ? ? 1_555 B BGC . C1 ? ? B BGC 1 B BGC 2 1_555 ? ? ? ? ? ? ? 1.399 ? ? covale2 covale both ? B BGC . O4 ? ? ? 1_555 B BGC . C1 ? ? B BGC 2 B BGC 3 1_555 ? ? ? ? ? ? ? 1.446 ? ? metalc1 metalc ? ? A GLY 9 O ? ? ? 1_555 C CA . CA ? ? A GLY 9 A CA 1169 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc2 metalc ? ? A GLU 11 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 11 A CA 1169 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc3 metalc ? ? A ALA 22 O ? ? ? 1_555 D CA . CA ? ? A ALA 22 A CA 1170 1_555 ? ? ? ? ? ? ? 2.417 ? ? metalc4 metalc ? ? A TRP 28 O ? ? ? 1_555 D CA . CA ? ? A TRP 28 A CA 1170 1_555 ? ? ? ? ? ? ? 2.693 ? ? metalc5 metalc ? ? A GLU 52 O ? ? ? 1_555 C CA . CA ? ? A GLU 52 A CA 1169 1_555 ? ? ? ? ? ? ? 2.289 ? ? metalc6 metalc ? ? A GLU 52 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 52 A CA 1169 1_555 ? ? ? ? ? ? ? 2.270 ? ? metalc7 metalc ? ? A LYS 55 O ? ? ? 1_555 C CA . CA ? ? A LYS 55 A CA 1169 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc8 metalc ? ? A ASP 160 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 160 A CA 1169 1_555 ? ? ? ? ? ? ? 2.421 ? ? metalc9 metalc ? ? A ASP 160 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 160 A CA 1169 1_555 ? ? ? ? ? ? ? 2.644 ? ? metalc10 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 1170 A HOH 2039 1_555 ? ? ? ? ? ? ? 2.400 ? ? metalc11 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 1170 A HOH 2046 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc12 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 1170 A HOH 2050 1_555 ? ? ? ? ? ? ? 2.283 ? ? metalc13 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 1170 A HOH 2102 1_555 ? ? ? ? ? ? ? 2.640 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 76 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 76 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 77 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 77 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.40 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 16 ? VAL A 17 ? GLY A 16 VAL A 17 AA 2 VAL A 41 ? GLU A 46 ? VAL A 41 GLU A 46 AA 3 LYS A 55 ? VAL A 61 ? LYS A 55 VAL A 61 AA 4 ASN A 155 ? ASP A 166 ? ASN A 155 ASP A 166 AA 5 THR A 85 ? ALA A 94 ? THR A 85 ALA A 94 AA 6 GLN A 126 ? THR A 133 ? GLN A 126 THR A 133 AB 1 TRP A 28 ? VAL A 32 ? TRP A 28 VAL A 32 AB 2 ILE A 71 ? ASN A 79 ? ILE A 71 ASN A 79 AB 3 VAL A 140 ? HIS A 146 ? VAL A 140 HIS A 146 AB 4 ALA A 99 ? GLY A 106 ? ALA A 99 GLY A 106 AB 5 GLU A 112 ? ILE A 121 ? GLU A 112 ILE A 121 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLY A 16 ? N GLY A 16 O VAL A 44 ? O VAL A 44 AA 2 3 N LEU A 45 ? N LEU A 45 O VAL A 56 ? O VAL A 56 AA 3 4 N VAL A 61 ? N VAL A 61 O ASN A 155 ? O ASN A 155 AA 4 5 N VAL A 165 ? N VAL A 165 O THR A 87 ? O THR A 87 AA 5 6 N ALA A 92 ? N ALA A 92 O GLN A 126 ? O GLN A 126 AB 1 2 N ASN A 31 ? N ASN A 31 O GLN A 72 ? O GLN A 72 AB 2 3 N VAL A 78 ? N VAL A 78 O ILE A 141 ? O ILE A 141 AB 3 4 N HIS A 146 ? N HIS A 146 O SER A 102 ? O SER A 102 AB 4 5 O VAL A 105 ? O VAL A 105 N TYR A 113 ? N TYR A 113 # _database_PDB_matrix.entry_id 2Y6G _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2Y6G _atom_sites.fract_transf_matrix[1][1] 0.020593 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020113 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015995 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 HIS 118 118 118 HIS HIS A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 TRP 125 125 125 TRP TRP A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 GLN 137 137 137 GLN GLN A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 HIS 146 146 146 HIS HIS A . n A 1 147 PHE 147 147 147 PHE PHE A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 TYR 149 149 149 TYR TYR A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 ILE 164 164 164 ILE ILE A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 LEU 167 167 167 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 1169 1169 CA CA A . D 3 CA 1 1170 1170 CA CA A . E 4 HOH 1 2001 2001 HOH HOH A . E 4 HOH 2 2002 2002 HOH HOH A . E 4 HOH 3 2003 2003 HOH HOH A . E 4 HOH 4 2004 2004 HOH HOH A . E 4 HOH 5 2005 2005 HOH HOH A . E 4 HOH 6 2006 2006 HOH HOH A . E 4 HOH 7 2007 2007 HOH HOH A . E 4 HOH 8 2008 2008 HOH HOH A . E 4 HOH 9 2009 2009 HOH HOH A . E 4 HOH 10 2010 2010 HOH HOH A . E 4 HOH 11 2011 2011 HOH HOH A . E 4 HOH 12 2012 2012 HOH HOH A . E 4 HOH 13 2013 2013 HOH HOH A . E 4 HOH 14 2014 2014 HOH HOH A . E 4 HOH 15 2015 2015 HOH HOH A . E 4 HOH 16 2016 2016 HOH HOH A . E 4 HOH 17 2017 2017 HOH HOH A . E 4 HOH 18 2018 2018 HOH HOH A . E 4 HOH 19 2019 2019 HOH HOH A . E 4 HOH 20 2020 2020 HOH HOH A . E 4 HOH 21 2021 2021 HOH HOH A . E 4 HOH 22 2022 2022 HOH HOH A . E 4 HOH 23 2023 2023 HOH HOH A . E 4 HOH 24 2024 2024 HOH HOH A . E 4 HOH 25 2025 2025 HOH HOH A . E 4 HOH 26 2026 2026 HOH HOH A . E 4 HOH 27 2027 2027 HOH HOH A . E 4 HOH 28 2028 2028 HOH HOH A . E 4 HOH 29 2029 2029 HOH HOH A . E 4 HOH 30 2030 2030 HOH HOH A . E 4 HOH 31 2031 2031 HOH HOH A . E 4 HOH 32 2032 2032 HOH HOH A . E 4 HOH 33 2033 2033 HOH HOH A . E 4 HOH 34 2034 2034 HOH HOH A . E 4 HOH 35 2035 2035 HOH HOH A . E 4 HOH 36 2036 2036 HOH HOH A . E 4 HOH 37 2037 2037 HOH HOH A . E 4 HOH 38 2038 2038 HOH HOH A . E 4 HOH 39 2039 2039 HOH HOH A . E 4 HOH 40 2040 2040 HOH HOH A . E 4 HOH 41 2041 2041 HOH HOH A . E 4 HOH 42 2042 2042 HOH HOH A . E 4 HOH 43 2043 2043 HOH HOH A . E 4 HOH 44 2044 2044 HOH HOH A . E 4 HOH 45 2045 2045 HOH HOH A . E 4 HOH 46 2046 2046 HOH HOH A . E 4 HOH 47 2047 2047 HOH HOH A . E 4 HOH 48 2048 2048 HOH HOH A . E 4 HOH 49 2049 2049 HOH HOH A . E 4 HOH 50 2050 2050 HOH HOH A . E 4 HOH 51 2051 2051 HOH HOH A . E 4 HOH 52 2052 2052 HOH HOH A . E 4 HOH 53 2053 2053 HOH HOH A . E 4 HOH 54 2054 2054 HOH HOH A . E 4 HOH 55 2055 2055 HOH HOH A . E 4 HOH 56 2056 2056 HOH HOH A . E 4 HOH 57 2057 2057 HOH HOH A . E 4 HOH 58 2058 2058 HOH HOH A . E 4 HOH 59 2059 2059 HOH HOH A . E 4 HOH 60 2060 2060 HOH HOH A . E 4 HOH 61 2061 2061 HOH HOH A . E 4 HOH 62 2062 2062 HOH HOH A . E 4 HOH 63 2063 2063 HOH HOH A . E 4 HOH 64 2064 2064 HOH HOH A . E 4 HOH 65 2065 2065 HOH HOH A . E 4 HOH 66 2066 2066 HOH HOH A . E 4 HOH 67 2067 2067 HOH HOH A . E 4 HOH 68 2068 2068 HOH HOH A . E 4 HOH 69 2069 2069 HOH HOH A . E 4 HOH 70 2070 2070 HOH HOH A . E 4 HOH 71 2071 2071 HOH HOH A . E 4 HOH 72 2072 2072 HOH HOH A . E 4 HOH 73 2073 2073 HOH HOH A . E 4 HOH 74 2074 2074 HOH HOH A . E 4 HOH 75 2075 2075 HOH HOH A . E 4 HOH 76 2076 2076 HOH HOH A . E 4 HOH 77 2077 2077 HOH HOH A . E 4 HOH 78 2078 2078 HOH HOH A . E 4 HOH 79 2079 2079 HOH HOH A . E 4 HOH 80 2080 2080 HOH HOH A . E 4 HOH 81 2081 2081 HOH HOH A . E 4 HOH 82 2082 2082 HOH HOH A . E 4 HOH 83 2083 2083 HOH HOH A . E 4 HOH 84 2084 2084 HOH HOH A . E 4 HOH 85 2085 2085 HOH HOH A . E 4 HOH 86 2086 2086 HOH HOH A . E 4 HOH 87 2087 2087 HOH HOH A . E 4 HOH 88 2088 2088 HOH HOH A . E 4 HOH 89 2089 2089 HOH HOH A . E 4 HOH 90 2090 2090 HOH HOH A . E 4 HOH 91 2091 2091 HOH HOH A . E 4 HOH 92 2092 2092 HOH HOH A . E 4 HOH 93 2093 2093 HOH HOH A . E 4 HOH 94 2094 2094 HOH HOH A . E 4 HOH 95 2095 2095 HOH HOH A . E 4 HOH 96 2096 2096 HOH HOH A . E 4 HOH 97 2097 2097 HOH HOH A . E 4 HOH 98 2098 2098 HOH HOH A . E 4 HOH 99 2099 2099 HOH HOH A . E 4 HOH 100 2100 2100 HOH HOH A . E 4 HOH 101 2101 2101 HOH HOH A . E 4 HOH 102 2102 2102 HOH HOH A . E 4 HOH 103 2103 2103 HOH HOH A . E 4 HOH 104 2104 2104 HOH HOH A . E 4 HOH 105 2105 2105 HOH HOH A . E 4 HOH 106 2106 2106 HOH HOH A . E 4 HOH 107 2107 2107 HOH HOH A . E 4 HOH 108 2108 2108 HOH HOH A . E 4 HOH 109 2109 2109 HOH HOH A . E 4 HOH 110 2110 2110 HOH HOH A . E 4 HOH 111 2111 2111 HOH HOH A . E 4 HOH 112 2112 2112 HOH HOH A . E 4 HOH 113 2113 2113 HOH HOH A . E 4 HOH 114 2114 2114 HOH HOH A . E 4 HOH 115 2115 2115 HOH HOH A . E 4 HOH 116 2116 2116 HOH HOH A . E 4 HOH 117 2117 2117 HOH HOH A . E 4 HOH 118 2118 2118 HOH HOH A . E 4 HOH 119 2119 2119 HOH HOH A . E 4 HOH 120 2120 2120 HOH HOH A . E 4 HOH 121 2121 2121 HOH HOH A . E 4 HOH 122 2122 2122 HOH HOH A . E 4 HOH 123 2123 2123 HOH HOH A . E 4 HOH 124 2124 2124 HOH HOH A . E 4 HOH 125 2125 2125 HOH HOH A . E 4 HOH 126 2126 2126 HOH HOH A . E 4 HOH 127 2127 2127 HOH HOH A . E 4 HOH 128 2128 2128 HOH HOH A . E 4 HOH 129 2129 2129 HOH HOH A . E 4 HOH 130 2130 2130 HOH HOH A . E 4 HOH 131 2131 2131 HOH HOH A . E 4 HOH 132 2132 2132 HOH HOH A . E 4 HOH 133 2133 2133 HOH HOH A . E 4 HOH 134 2134 2134 HOH HOH A . E 4 HOH 135 2135 2135 HOH HOH A . E 4 HOH 136 2136 2136 HOH HOH A . E 4 HOH 137 2137 2137 HOH HOH A . E 4 HOH 138 2138 2138 HOH HOH A . E 4 HOH 139 2139 2139 HOH HOH A . E 4 HOH 140 2140 2140 HOH HOH A . E 4 HOH 141 2141 2141 HOH HOH A . E 4 HOH 142 2142 2142 HOH HOH A . E 4 HOH 143 2143 2143 HOH HOH A . E 4 HOH 144 2144 2144 HOH HOH A . E 4 HOH 145 2145 2145 HOH HOH A . E 4 HOH 146 2146 2146 HOH HOH A . E 4 HOH 147 2147 2147 HOH HOH A . E 4 HOH 148 2148 2148 HOH HOH A . E 4 HOH 149 2149 2149 HOH HOH A . E 4 HOH 150 2150 2150 HOH HOH A . E 4 HOH 151 2151 2151 HOH HOH A . E 4 HOH 152 2152 2152 HOH HOH A . E 4 HOH 153 2153 2153 HOH HOH A . E 4 HOH 154 2154 2154 HOH HOH A . E 4 HOH 155 2155 2155 HOH HOH A . E 4 HOH 156 2156 2156 HOH HOH A . E 4 HOH 157 2157 2157 HOH HOH A . E 4 HOH 158 2158 2158 HOH HOH A . E 4 HOH 159 2159 2159 HOH HOH A . E 4 HOH 160 2160 2160 HOH HOH A . E 4 HOH 161 2161 2161 HOH HOH A . E 4 HOH 162 2162 2162 HOH HOH A . E 4 HOH 163 2163 2163 HOH HOH A . E 4 HOH 164 2164 2164 HOH HOH A . E 4 HOH 165 2165 2165 HOH HOH A . E 4 HOH 166 2166 2166 HOH HOH A . E 4 HOH 167 2167 2167 HOH HOH A . E 4 HOH 168 2168 2168 HOH HOH A . E 4 HOH 169 2169 2169 HOH HOH A . E 4 HOH 170 2170 2170 HOH HOH A . E 4 HOH 171 2171 2171 HOH HOH A . E 4 HOH 172 2172 2172 HOH HOH A . E 4 HOH 173 2173 2173 HOH HOH A . E 4 HOH 174 2174 2174 HOH HOH A . E 4 HOH 175 2175 2175 HOH HOH A . E 4 HOH 176 2176 2176 HOH HOH A . E 4 HOH 177 2177 2177 HOH HOH A . E 4 HOH 178 2178 2178 HOH HOH A . E 4 HOH 179 2179 2179 HOH HOH A . E 4 HOH 180 2180 2180 HOH HOH A . E 4 HOH 181 2181 2181 HOH HOH A . E 4 HOH 182 2182 2182 HOH HOH A . E 4 HOH 183 2183 2183 HOH HOH A . E 4 HOH 184 2184 2184 HOH HOH A . E 4 HOH 185 2185 2185 HOH HOH A . E 4 HOH 186 2186 2186 HOH HOH A . E 4 HOH 187 2187 2187 HOH HOH A . E 4 HOH 188 2188 2188 HOH HOH A . E 4 HOH 189 2189 2189 HOH HOH A . E 4 HOH 190 2190 2190 HOH HOH A . E 4 HOH 191 2191 2191 HOH HOH A . E 4 HOH 192 2192 2192 HOH HOH A . E 4 HOH 193 2193 2193 HOH HOH A . E 4 HOH 194 2194 2194 HOH HOH A . E 4 HOH 195 2196 2196 HOH HOH A . E 4 HOH 196 2197 2197 HOH HOH A . E 4 HOH 197 2198 2198 HOH HOH A . E 4 HOH 198 2200 2200 HOH HOH A . E 4 HOH 199 2201 2201 HOH HOH A . E 4 HOH 200 2202 2202 HOH HOH A . E 4 HOH 201 2203 2203 HOH HOH A . E 4 HOH 202 2204 2204 HOH HOH A . E 4 HOH 203 2205 2205 HOH HOH A . E 4 HOH 204 2206 2206 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900021 _pdbx_molecule_features.name beta-cellotriose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Metabolism _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900021 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLY 9 ? A GLY 9 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OE2 ? A GLU 11 ? A GLU 11 ? 1_555 80.1 ? 2 O ? A GLY 9 ? A GLY 9 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 O ? A GLU 52 ? A GLU 52 ? 1_555 159.2 ? 3 OE2 ? A GLU 11 ? A GLU 11 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 O ? A GLU 52 ? A GLU 52 ? 1_555 81.0 ? 4 O ? A GLY 9 ? A GLY 9 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OE1 ? A GLU 52 ? A GLU 52 ? 1_555 91.4 ? 5 OE2 ? A GLU 11 ? A GLU 11 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OE1 ? A GLU 52 ? A GLU 52 ? 1_555 90.1 ? 6 O ? A GLU 52 ? A GLU 52 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OE1 ? A GLU 52 ? A GLU 52 ? 1_555 80.1 ? 7 O ? A GLY 9 ? A GLY 9 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 O ? A LYS 55 ? A LYS 55 ? 1_555 86.3 ? 8 OE2 ? A GLU 11 ? A GLU 11 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 O ? A LYS 55 ? A LYS 55 ? 1_555 86.1 ? 9 O ? A GLU 52 ? A GLU 52 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 O ? A LYS 55 ? A LYS 55 ? 1_555 101.0 ? 10 OE1 ? A GLU 52 ? A GLU 52 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 O ? A LYS 55 ? A LYS 55 ? 1_555 175.9 ? 11 O ? A GLY 9 ? A GLY 9 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD1 ? A ASP 160 ? A ASP 160 ? 1_555 79.3 ? 12 OE2 ? A GLU 11 ? A GLU 11 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD1 ? A ASP 160 ? A ASP 160 ? 1_555 159.3 ? 13 O ? A GLU 52 ? A GLU 52 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD1 ? A ASP 160 ? A ASP 160 ? 1_555 119.6 ? 14 OE1 ? A GLU 52 ? A GLU 52 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD1 ? A ASP 160 ? A ASP 160 ? 1_555 92.1 ? 15 O ? A LYS 55 ? A LYS 55 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD1 ? A ASP 160 ? A ASP 160 ? 1_555 90.8 ? 16 O ? A GLY 9 ? A GLY 9 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD2 ? A ASP 160 ? A ASP 160 ? 1_555 127.2 ? 17 OE2 ? A GLU 11 ? A GLU 11 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD2 ? A ASP 160 ? A ASP 160 ? 1_555 146.4 ? 18 O ? A GLU 52 ? A GLU 52 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD2 ? A ASP 160 ? A ASP 160 ? 1_555 73.5 ? 19 OE1 ? A GLU 52 ? A GLU 52 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD2 ? A ASP 160 ? A ASP 160 ? 1_555 106.3 ? 20 O ? A LYS 55 ? A LYS 55 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD2 ? A ASP 160 ? A ASP 160 ? 1_555 77.8 ? 21 OD1 ? A ASP 160 ? A ASP 160 ? 1_555 CA ? C CA . ? A CA 1169 ? 1_555 OD2 ? A ASP 160 ? A ASP 160 ? 1_555 51.4 ? 22 O ? A ALA 22 ? A ALA 22 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? A TRP 28 ? A TRP 28 ? 1_555 86.0 ? 23 O ? A ALA 22 ? A ALA 22 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2039 ? 1_555 80.6 ? 24 O ? A TRP 28 ? A TRP 28 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2039 ? 1_555 150.4 ? 25 O ? A ALA 22 ? A ALA 22 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2046 ? 1_555 93.8 ? 26 O ? A TRP 28 ? A TRP 28 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2046 ? 1_555 72.1 ? 27 O ? E HOH . ? A HOH 2039 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2046 ? 1_555 82.4 ? 28 O ? A ALA 22 ? A ALA 22 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2050 ? 1_555 72.6 ? 29 O ? A TRP 28 ? A TRP 28 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2050 ? 1_555 106.1 ? 30 O ? E HOH . ? A HOH 2039 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2050 ? 1_555 95.0 ? 31 O ? E HOH . ? A HOH 2046 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2050 ? 1_555 166.3 ? 32 O ? A ALA 22 ? A ALA 22 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2102 ? 1_555 175.4 ? 33 O ? A TRP 28 ? A TRP 28 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2102 ? 1_555 96.6 ? 34 O ? E HOH . ? A HOH 2039 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2102 ? 1_555 95.4 ? 35 O ? E HOH . ? A HOH 2046 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2102 ? 1_555 83.5 ? 36 O ? E HOH . ? A HOH 2050 ? 1_555 CA ? D CA . ? A CA 1170 ? 1_555 O ? E HOH . ? A HOH 2102 ? 1_555 110.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-07 2 'Structure model' 1 1 2012-08-01 3 'Structure model' 1 2 2018-01-17 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' Other 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 3 'Structure model' diffrn_source 5 4 'Structure model' atom_site 6 4 'Structure model' atom_site_anisotrop 7 4 'Structure model' chem_comp 8 4 'Structure model' entity 9 4 'Structure model' entity_name_com 10 4 'Structure model' pdbx_branch_scheme 11 4 'Structure model' pdbx_chem_comp_identifier 12 4 'Structure model' pdbx_database_status 13 4 'Structure model' pdbx_entity_branch 14 4 'Structure model' pdbx_entity_branch_descriptor 15 4 'Structure model' pdbx_entity_branch_link 16 4 'Structure model' pdbx_entity_branch_list 17 4 'Structure model' pdbx_entity_nonpoly 18 4 'Structure model' pdbx_molecule_features 19 4 'Structure model' pdbx_nonpoly_scheme 20 4 'Structure model' pdbx_struct_assembly_gen 21 4 'Structure model' pdbx_struct_conn_angle 22 4 'Structure model' struct_asym 23 4 'Structure model' struct_conn 24 4 'Structure model' struct_conn_type 25 4 'Structure model' struct_site 26 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.name' 2 3 'Structure model' '_citation.journal_id_ISSN' 3 3 'Structure model' '_citation.page_last' 4 3 'Structure model' '_citation.pdbx_database_id_DOI' 5 3 'Structure model' '_citation.title' 6 3 'Structure model' '_citation_author.name' 7 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 8 4 'Structure model' '_atom_site.B_iso_or_equiv' 9 4 'Structure model' '_atom_site.Cartn_x' 10 4 'Structure model' '_atom_site.Cartn_y' 11 4 'Structure model' '_atom_site.Cartn_z' 12 4 'Structure model' '_atom_site.auth_asym_id' 13 4 'Structure model' '_atom_site.auth_atom_id' 14 4 'Structure model' '_atom_site.auth_comp_id' 15 4 'Structure model' '_atom_site.auth_seq_id' 16 4 'Structure model' '_atom_site.label_asym_id' 17 4 'Structure model' '_atom_site.label_atom_id' 18 4 'Structure model' '_atom_site.label_comp_id' 19 4 'Structure model' '_atom_site.label_entity_id' 20 4 'Structure model' '_atom_site.occupancy' 21 4 'Structure model' '_atom_site.type_symbol' 22 4 'Structure model' '_atom_site_anisotrop.U[1][1]' 23 4 'Structure model' '_atom_site_anisotrop.U[1][2]' 24 4 'Structure model' '_atom_site_anisotrop.U[1][3]' 25 4 'Structure model' '_atom_site_anisotrop.U[2][2]' 26 4 'Structure model' '_atom_site_anisotrop.U[2][3]' 27 4 'Structure model' '_atom_site_anisotrop.U[3][3]' 28 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 29 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 30 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 31 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 32 4 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 33 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 34 4 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 35 4 'Structure model' '_atom_site_anisotrop.type_symbol' 36 4 'Structure model' '_chem_comp.name' 37 4 'Structure model' '_chem_comp.type' 38 4 'Structure model' '_entity.formula_weight' 39 4 'Structure model' '_entity.pdbx_description' 40 4 'Structure model' '_entity.pdbx_number_of_molecules' 41 4 'Structure model' '_entity.src_method' 42 4 'Structure model' '_entity.type' 43 4 'Structure model' '_pdbx_database_status.status_code_sf' 44 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 45 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 46 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 47 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 48 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 49 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 50 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 51 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 52 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 53 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 54 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 55 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 56 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 57 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 58 4 'Structure model' '_pdbx_struct_conn_angle.value' 59 4 'Structure model' '_struct_conn.conn_type_id' 60 4 'Structure model' '_struct_conn.id' 61 4 'Structure model' '_struct_conn.pdbx_dist_value' 62 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 63 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 64 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 65 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 66 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 67 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 68 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 69 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 70 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 71 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 72 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 73 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 74 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 75 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 76 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 77 4 'Structure model' '_struct_conn_type.id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language SHELXL-97 refinement . ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? XSCALE 'data scaling' . ? 3 ? ? ? ? REFMAC phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 2Y6G _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, TRP 68 TO PHE ENGINEERED RESIDUE IN CHAIN A, ASP 69 TO ASN ENGINEERED RESIDUE IN CHAIN A, GLU 71 TO GLN ENGINEERED RESIDUE IN CHAIN A, PHE 75 TO LEU ENGINEERED RESIDUE IN CHAIN A, TRP 90 TO ARG ENGINEERED RESIDUE IN CHAIN A, GLN 110 TO ASP ENGINEERED RESIDUE IN CHAIN A, GLU 117 TO HIS ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;SEQUENCE ABOVE STARTS AT INIATING MET1 AND ENDS WITH L DUE TO CLONING ARTIFACT. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OE1 A GLU 43 ? B CD A GLU 43 ? B OE2 A GLU 43 ? B 130.91 123.30 7.61 1.20 N 2 1 NE A ARG 81 ? A CZ A ARG 81 ? A NH1 A ARG 81 ? A 124.66 120.30 4.36 0.50 N 3 1 CB A TYR 88 ? ? CG A TYR 88 ? ? CD2 A TYR 88 ? ? 116.68 121.00 -4.32 0.60 N 4 1 CB A TYR 88 ? ? CG A TYR 88 ? ? CD1 A TYR 88 ? ? 127.45 121.00 6.45 0.60 N 5 1 CG A TYR 88 ? ? CD1 A TYR 88 ? ? CE1 A TYR 88 ? ? 127.27 121.30 5.97 0.80 N 6 1 CD1 A TYR 88 ? ? CE1 A TYR 88 ? ? CZ A TYR 88 ? ? 114.12 119.80 -5.68 0.90 N 7 1 CD A ARG 93 ? B NE A ARG 93 ? B CZ A ARG 93 ? B 149.83 123.60 26.23 1.40 N 8 1 NH1 A ARG 93 ? B CZ A ARG 93 ? B NH2 A ARG 93 ? B 111.87 119.40 -7.53 1.10 N 9 1 NE A ARG 93 ? A CZ A ARG 93 ? A NH1 A ARG 93 ? A 123.53 120.30 3.23 0.50 N 10 1 NE A ARG 93 ? B CZ A ARG 93 ? B NH1 A ARG 93 ? B 130.03 120.30 9.73 0.50 N 11 1 NE A ARG 115 ? ? CZ A ARG 115 ? ? NH1 A ARG 115 ? ? 131.86 120.30 11.56 0.50 N 12 1 NE A ARG 115 ? ? CZ A ARG 115 ? ? NH2 A ARG 115 ? ? 115.16 120.30 -5.14 0.50 N 13 1 CB A HIS 117 ? ? CG A HIS 117 ? ? CD2 A HIS 117 ? ? 143.30 131.40 11.90 1.20 N 14 1 CB A HIS 117 ? ? CG A HIS 117 ? ? ND1 A HIS 117 ? ? 113.60 121.40 -7.80 1.30 N 15 1 O A HIS 117 ? ? C A HIS 117 ? ? N A HIS 118 ? B 111.93 122.70 -10.77 1.60 Y 16 1 C A HIS 117 ? ? N A HIS 118 ? A CA A HIS 118 ? A 138.28 121.70 16.58 2.50 Y 17 1 NE A ARG 142 ? B CZ A ARG 142 ? B NH1 A ARG 142 ? B 124.66 120.30 4.36 0.50 N 18 1 NE A ARG 142 ? A CZ A ARG 142 ? A NH2 A ARG 142 ? A 116.30 120.30 -4.00 0.50 N 19 1 NE A ARG 142 ? B CZ A ARG 142 ? B NH2 A ARG 142 ? B 116.17 120.30 -4.13 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 118 ? A 32.04 65.59 2 1 HIS A 118 ? B 75.86 43.93 3 1 ASP A 136 ? ? -126.09 -158.33 4 1 ILE A 141 ? ? -118.45 -165.21 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 BGC 1 B BGC 1 A BGC 1171 n B 2 BGC 2 B BGC 2 A BGC 1172 n B 2 BGC 3 B BGC 3 A BGC 1173 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpb1-4DGlcpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,3,2/[a2122h-1b_1-5]/1-1-1/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Glcp]{[(4+1)][b-D-Glcp]{[(4+1)][b-D-Glcp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 BGC C1 O1 1 BGC O4 HO4 sing ? 2 2 3 BGC C1 O1 2 BGC O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 BGC 1 n 2 BGC 2 n 2 BGC 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH #