HEADER ARGININE-BINDING PROTEIN 31-JAN-11 2Y7I TITLE STRUCTURAL BASIS FOR HIGH ARGININE SPECIFICITY IN SALMONELLA TITLE 2 TYPHIMURIUM PERIPLASMIC BINDING PROTEIN STM4351. COMPND MOL_ID: 1; COMPND 2 MOLECULE: STM4351; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 18-246; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA; SOURCE 3 ORGANISM_TAXID: 90371; SOURCE 4 STRAIN: SEROVAR TYPHIMURIUM; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-AI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS ARGININE-BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.L.STAMP,P.OWEN,K.EL OMARI,M.LOCKYER,H.K.LAMB,I.G.CHARLES, AUTHOR 2 A.R.HAWKINS,D.K.STAMMERS REVDAT 4 20-DEC-23 2Y7I 1 REMARK LINK REVDAT 3 22-JUN-11 2Y7I 1 JRNL REVDAT 2 25-MAY-11 2Y7I 1 TITLE JRNL REVDAT 1 11-MAY-11 2Y7I 0 JRNL AUTH A.L.STAMP,P.OWEN,K.EL OMARI,M.LOCKYER,H.K.LAMB,I.G.CHARLES, JRNL AUTH 2 A.R.HAWKINS,D.K.STAMMERS JRNL TITL CRYSTALLOGRAPHIC AND MICROCALORIMETRIC ANALYSES REVEAL THE JRNL TITL 2 STRUCTURAL BASIS FOR HIGH ARGININE SPECIFICITY IN THE JRNL TITL 3 SALMONELLA ENTERICA SEROVAR TYPHIMURIUM PERIPLASMIC BINDING JRNL TITL 4 PROTEIN STM4351. JRNL REF PROTEINS V. 79 2352 2011 JRNL REFN ISSN 0887-3585 JRNL PMID 21560168 JRNL DOI 10.1002/PROT.23060 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1856 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2592 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 131 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3558 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.17000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : -1.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.170 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.109 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.634 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3725 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5039 ; 1.084 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 462 ; 5.645 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;34.454 ;24.892 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 624 ;14.157 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;18.907 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 537 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2894 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2295 ; 0.414 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3675 ; 0.795 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1430 ; 1.338 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1363 ; 2.194 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 245 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8145 0.1955 33.7093 REMARK 3 T TENSOR REMARK 3 T11: 0.0402 T22: 0.0168 REMARK 3 T33: 0.0537 T12: -0.0068 REMARK 3 T13: -0.0185 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.0925 L22: 0.9872 REMARK 3 L33: 1.7575 L12: 0.0083 REMARK 3 L13: -1.2936 L23: 0.1008 REMARK 3 S TENSOR REMARK 3 S11: -0.0721 S12: 0.0692 S13: -0.0399 REMARK 3 S21: -0.0412 S22: 0.0594 S23: 0.0234 REMARK 3 S31: 0.0434 S32: 0.0616 S33: 0.0126 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 245 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9626 25.5860 9.7989 REMARK 3 T TENSOR REMARK 3 T11: 0.1177 T22: 0.1596 REMARK 3 T33: 0.0988 T12: -0.0421 REMARK 3 T13: 0.0221 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.2206 L22: 1.5354 REMARK 3 L33: 4.7917 L12: -0.4438 REMARK 3 L13: 0.8158 L23: -0.5513 REMARK 3 S TENSOR REMARK 3 S11: 0.1204 S12: 0.2285 S13: 0.0367 REMARK 3 S21: -0.1142 S22: -0.1622 S23: -0.0570 REMARK 3 S31: -0.2489 S32: 0.5804 S33: 0.0417 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2Y7I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1290047197. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 273 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35156 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 47.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.86000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1LAH REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 8000, 100MM SODIUM CACODYLATE, REMARK 280 200MM ZINC ACETATE., PH 7.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.16550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -161.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 246 REMARK 465 ALA B 18 REMARK 465 SER B 19 REMARK 465 VAL B 20 REMARK 465 SER B 21 REMARK 465 GLN B 246 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 106 OH TYR A 236 2.15 REMARK 500 O TYR A 106 OH TYR A 236 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP B 126 ZN ZN A 1248 2555 1.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 33 59.37 -140.28 REMARK 500 ALA A 88 45.98 -164.90 REMARK 500 ASP A 200 115.64 -35.39 REMARK 500 ALA B 88 43.43 -163.94 REMARK 500 LEU B 110 -164.37 -107.60 REMARK 500 SER B 199 14.51 -143.90 REMARK 500 ASN B 216 56.92 -112.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1247 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 26 ND1 REMARK 620 2 ASP A 84 OD2 101.8 REMARK 620 3 HOH A2150 O 95.4 106.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1248 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 40 OD2 REMARK 620 2 ASP A 42 OD1 107.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1246 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 72 OD2 REMARK 620 2 ASP A 157 OD2 121.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2247 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 26 ND1 REMARK 620 2 ASP B 84 OD2 94.6 REMARK 620 3 HOH B2070 O 93.6 95.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2246 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 72 OD2 REMARK 620 2 ASP B 157 OD1 111.3 REMARK 620 3 HOH B2069 O 141.7 99.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2250 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2064 O REMARK 620 2 HOH B2065 O 177.7 REMARK 620 3 HOH B2066 O 97.8 80.3 REMARK 620 4 HOH B2067 O 86.9 94.8 100.7 REMARK 620 5 HOH B2068 O 83.9 97.2 153.1 106.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARG A 1245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1248 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARG B 1245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2247 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 2248 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 2249 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2250 REMARK 999 REMARK 999 SEQUENCE REMARK 999 PROTEIN IS MATURE FORM WITH SIGNAL PEPTIDE REMOVED. DBREF 2Y7I A 18 246 UNP Q8ZKA9 Q8ZKA9_SALTY 18 246 DBREF 2Y7I B 18 246 UNP Q8ZKA9 Q8ZKA9_SALTY 18 246 SEQRES 1 A 229 ALA SER VAL SER ALA ARG THR LEU HIS PHE GLY THR SER SEQRES 2 A 229 ALA THR TYR ALA PRO TYR GLU PHE VAL ASP ALA ASP ASN SEQRES 3 A 229 LYS ILE VAL GLY PHE ASP ILE ASP VAL ALA ASN ALA VAL SEQRES 4 A 229 CYS LYS GLU MET GLN ALA GLU CYS SER PHE THR ASN GLN SEQRES 5 A 229 SER PHE ASP SER LEU ILE PRO SER LEU ARG PHE LYS LYS SEQRES 6 A 229 PHE ASP ALA VAL ILE ALA GLY MET ASP MET THR PRO LYS SEQRES 7 A 229 ARG GLU GLN GLN VAL SER PHE SER GLN PRO TYR TYR GLU SEQRES 8 A 229 GLY LEU SER ALA VAL VAL VAL THR ARG LYS GLY ALA TYR SEQRES 9 A 229 HIS THR PHE ALA ASP LEU LYS GLY LYS LYS VAL GLY LEU SEQRES 10 A 229 GLU ASN GLY THR THR HIS GLN ARG TYR LEU GLN ASP LYS SEQRES 11 A 229 GLN GLN ALA ILE THR PRO VAL ALA TYR ASP SER TYR LEU SEQRES 12 A 229 ASN ALA PHE THR ASP LEU LYS ASN ASN ARG LEU GLU GLY SEQRES 13 A 229 VAL PHE GLY ASP VAL ALA ALA ILE GLY LYS TRP LEU LYS SEQRES 14 A 229 ASN ASN PRO ASP TYR ALA ILE MET ASP GLU ARG ALA SER SEQRES 15 A 229 ASP PRO ASP TYR TYR GLY LYS GLY LEU GLY ILE ALA VAL SEQRES 16 A 229 ARG LYS ASP ASN ASP ALA LEU LEU GLN GLU ILE ASN ALA SEQRES 17 A 229 ALA LEU ASP LYS VAL LYS ALA SER PRO GLU TYR ALA GLN SEQRES 18 A 229 MET GLN GLU LYS TRP PHE THR GLN SEQRES 1 B 229 ALA SER VAL SER ALA ARG THR LEU HIS PHE GLY THR SER SEQRES 2 B 229 ALA THR TYR ALA PRO TYR GLU PHE VAL ASP ALA ASP ASN SEQRES 3 B 229 LYS ILE VAL GLY PHE ASP ILE ASP VAL ALA ASN ALA VAL SEQRES 4 B 229 CYS LYS GLU MET GLN ALA GLU CYS SER PHE THR ASN GLN SEQRES 5 B 229 SER PHE ASP SER LEU ILE PRO SER LEU ARG PHE LYS LYS SEQRES 6 B 229 PHE ASP ALA VAL ILE ALA GLY MET ASP MET THR PRO LYS SEQRES 7 B 229 ARG GLU GLN GLN VAL SER PHE SER GLN PRO TYR TYR GLU SEQRES 8 B 229 GLY LEU SER ALA VAL VAL VAL THR ARG LYS GLY ALA TYR SEQRES 9 B 229 HIS THR PHE ALA ASP LEU LYS GLY LYS LYS VAL GLY LEU SEQRES 10 B 229 GLU ASN GLY THR THR HIS GLN ARG TYR LEU GLN ASP LYS SEQRES 11 B 229 GLN GLN ALA ILE THR PRO VAL ALA TYR ASP SER TYR LEU SEQRES 12 B 229 ASN ALA PHE THR ASP LEU LYS ASN ASN ARG LEU GLU GLY SEQRES 13 B 229 VAL PHE GLY ASP VAL ALA ALA ILE GLY LYS TRP LEU LYS SEQRES 14 B 229 ASN ASN PRO ASP TYR ALA ILE MET ASP GLU ARG ALA SER SEQRES 15 B 229 ASP PRO ASP TYR TYR GLY LYS GLY LEU GLY ILE ALA VAL SEQRES 16 B 229 ARG LYS ASP ASN ASP ALA LEU LEU GLN GLU ILE ASN ALA SEQRES 17 B 229 ALA LEU ASP LYS VAL LYS ALA SER PRO GLU TYR ALA GLN SEQRES 18 B 229 MET GLN GLU LYS TRP PHE THR GLN HET ARG A1245 12 HET ZN A1246 1 HET ZN A1247 1 HET ZN A1248 1 HET ACT A1249 4 HET GOL A1250 6 HET ARG B1245 12 HET ZN B2246 1 HET ZN B2247 1 HET ACT B2248 4 HET GOL B2249 6 HET ZN B2250 1 HETNAM ARG ARGININE HETNAM ZN ZINC ION HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ARG 2(C6 H15 N4 O2 1+) FORMUL 4 ZN 6(ZN 2+) FORMUL 7 ACT 2(C2 H3 O2 1-) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 15 HOH *224(H2 O) HELIX 1 1 GLY A 47 MET A 60 1 14 HELIX 2 2 SER A 70 ASP A 72 5 3 HELIX 3 3 SER A 73 PHE A 80 1 8 HELIX 4 4 THR A 93 GLN A 98 1 6 HELIX 5 5 PHE A 124 LYS A 128 5 5 HELIX 6 6 THR A 138 GLN A 148 1 11 HELIX 7 7 SER A 158 ASN A 168 1 11 HELIX 8 8 VAL A 178 LYS A 186 1 9 HELIX 9 9 ASN A 216 ALA A 232 1 17 HELIX 10 10 SER A 233 THR A 245 1 13 HELIX 11 11 GLY B 47 MET B 60 1 14 HELIX 12 12 SER B 70 ASP B 72 5 3 HELIX 13 13 SER B 73 PHE B 80 1 8 HELIX 14 14 THR B 93 GLN B 98 1 6 HELIX 15 15 THR B 123 LYS B 128 5 6 HELIX 16 16 THR B 138 GLN B 148 1 11 HELIX 17 17 SER B 158 ASN B 168 1 11 HELIX 18 18 VAL B 178 LYS B 186 1 9 HELIX 19 19 ASN B 216 ALA B 232 1 17 HELIX 20 20 SER B 233 THR B 245 1 13 SHEET 1 AA 3 GLU A 63 ASN A 68 0 SHEET 2 AA 3 THR A 24 THR A 29 1 O LEU A 25 N SER A 65 SHEET 3 AA 3 ALA A 85 VAL A 86 1 O ALA A 85 N GLY A 28 SHEET 1 AB 2 PHE A 38 VAL A 39 0 SHEET 2 AB 2 ILE A 45 VAL A 46 -1 O VAL A 46 N PHE A 38 SHEET 1 AC 2 SER A 101 PHE A 102 0 SHEET 2 AC 2 ALA A 211 VAL A 212 -1 O VAL A 212 N SER A 101 SHEET 1 AD 5 THR A 152 TYR A 156 0 SHEET 2 AD 5 LYS A 131 GLU A 135 1 O VAL A 132 N VAL A 154 SHEET 3 AD 5 GLY A 173 ASP A 177 1 O GLY A 173 N GLY A 133 SHEET 4 AD 5 ALA A 112 ARG A 117 -1 O VAL A 113 N GLY A 176 SHEET 5 AD 5 TYR A 191 ILE A 193 -1 O ALA A 192 N THR A 116 SHEET 1 BA 3 GLU B 63 ASN B 68 0 SHEET 2 BA 3 THR B 24 THR B 29 1 O LEU B 25 N SER B 65 SHEET 3 BA 3 ALA B 85 VAL B 86 1 O ALA B 85 N GLY B 28 SHEET 1 BB 2 PHE B 38 VAL B 39 0 SHEET 2 BB 2 ILE B 45 VAL B 46 -1 O VAL B 46 N PHE B 38 SHEET 1 BC 2 SER B 101 PHE B 102 0 SHEET 2 BC 2 ALA B 211 VAL B 212 -1 O VAL B 212 N SER B 101 SHEET 1 BD 5 THR B 152 TYR B 156 0 SHEET 2 BD 5 LYS B 131 GLU B 135 1 O VAL B 132 N VAL B 154 SHEET 3 BD 5 GLY B 173 ASP B 177 1 O GLY B 173 N GLY B 133 SHEET 4 BD 5 ALA B 112 ARG B 117 -1 O VAL B 113 N GLY B 176 SHEET 5 BD 5 TYR B 191 ILE B 193 -1 O ALA B 192 N THR B 116 LINK ND1 HIS A 26 ZN ZN A1247 1555 1555 2.07 LINK OD2 ASP A 40 ZN ZN A1248 1555 1555 2.12 LINK OD1 ASP A 42 ZN ZN A1248 1555 1555 1.92 LINK OD2 ASP A 72 ZN ZN A1246 1555 1555 2.06 LINK OD2 ASP A 84 ZN ZN A1247 1555 1555 2.06 LINK OD2 ASP A 157 ZN ZN A1246 1555 1555 1.85 LINK ZN ZN A1247 O HOH A2150 1555 1555 2.16 LINK ND1 HIS B 26 ZN ZN B2247 1555 1555 2.09 LINK OD2 ASP B 72 ZN ZN B2246 1555 1555 2.04 LINK OD2 ASP B 84 ZN ZN B2247 1555 1555 2.18 LINK OD1 ASP B 157 ZN ZN B2246 1555 1555 2.13 LINK O HOH B2064 ZN ZN B2250 1555 1555 2.42 LINK O HOH B2065 ZN ZN B2250 1555 1555 2.43 LINK O HOH B2066 ZN ZN B2250 1555 1555 2.55 LINK O HOH B2067 ZN ZN B2250 1555 1555 2.09 LINK O HOH B2068 ZN ZN B2250 1555 1555 2.32 LINK O HOH B2069 ZN ZN B2246 1555 1555 2.24 LINK O HOH B2070 ZN ZN B2247 1555 1555 2.46 CISPEP 1 ALA A 34 PRO A 35 0 3.90 CISPEP 2 ALA B 34 PRO B 35 0 3.58 SITE 1 AC1 14 SER A 30 THR A 32 TYR A 33 GLU A 37 SITE 2 AC1 14 PHE A 71 ALA A 88 GLY A 89 ASP A 91 SITE 3 AC1 14 ARG A 96 GLU A 135 THR A 138 THR A 139 SITE 4 AC1 14 HIS A 140 ASP A 177 SITE 1 AC2 2 ASP A 72 ASP A 157 SITE 1 AC3 3 HIS A 26 ASP A 84 HOH A2150 SITE 1 AC4 2 ASP A 40 ASP A 42 SITE 1 AC5 7 THR A 93 LYS A 95 THR A 138 ARG A 142 SITE 2 AC5 7 HOH A2071 HOH A2151 HOH A2152 SITE 1 AC6 8 GLY A 119 TYR A 121 HIS A 122 ALA A 192 SITE 2 AC6 8 MET A 194 ASP A 195 HOH A2108 HOH A2153 SITE 1 AC7 15 SER B 30 THR B 32 TYR B 33 GLU B 37 SITE 2 AC7 15 PHE B 71 ALA B 88 GLY B 89 ASP B 91 SITE 3 AC7 15 ARG B 96 GLU B 135 THR B 138 THR B 139 SITE 4 AC7 15 HIS B 140 ASP B 177 HOH B2036 SITE 1 AC8 3 ASP B 72 ASP B 157 HOH B2069 SITE 1 AC9 3 HIS B 26 ASP B 84 HOH B2070 SITE 1 BC1 4 THR B 93 ARG B 96 THR B 138 ARG B 142 SITE 1 BC2 6 GLY B 119 TYR B 121 HIS B 122 MET B 194 SITE 2 BC2 6 ASP B 195 HOH B2071 SITE 1 BC3 5 HOH B2064 HOH B2065 HOH B2066 HOH B2067 SITE 2 BC3 5 HOH B2068 CRYST1 48.317 56.331 88.370 90.00 100.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020697 0.000000 0.003713 0.00000 SCALE2 0.000000 0.017752 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011497 0.00000