HEADER HYDROLASE 07-FEB-11 2Y8K TITLE STRUCTURE OF CTGH5-CBM6, AN ARABINOXYLAN-SPECIFIC XYLANASE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOHYDRATE BINDING FAMILY 6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GH5 AND CBM6 MODULES, RESIDUES 37-516; COMPND 5 SYNONYM: ARABINOXYLANASE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 1515; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET21A KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.J.FIRBANK,M.A.CORREIA,K.MAZUMDER,J.L.BRAS,Y.ZHU,R.J.LEWIS,W.S.YORK, AUTHOR 2 C.M.FONTES,H.J.GILBERT REVDAT 3 29-JUN-11 2Y8K 1 AUTHOR JRNL REVDAT 2 30-MAR-11 2Y8K 1 AUTHOR JRNL REMARK REVDAT 1 16-FEB-11 2Y8K 0 JRNL AUTH M.A.CORREIA,K.MAZUMDER,J.L.BRAS,S.J.FIRBANK,Y.ZHU,R.J.LEWIS, JRNL AUTH 2 W.S.YORK,C.M.FONTES,H.J.GILBERT JRNL TITL STRUCTURE AND FUNCTION OF AN ARABINOXYLAN-SPECIFIC XYLANASE. JRNL REF J.BIOL.CHEM. V. 286 22510 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21378160 JRNL DOI 10.1074/JBC.M110.217315 REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 99.95 REMARK 3 NUMBER OF REFLECTIONS : 90100 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.14685 REMARK 3 R VALUE (WORKING SET) : 0.14581 REMARK 3 FREE R VALUE : 0.16627 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 4744 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.470 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.508 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6552 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.252 REMARK 3 BIN FREE R VALUE SET COUNT : 357 REMARK 3 BIN FREE R VALUE : 0.279 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3797 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 625 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.099 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26 REMARK 3 B22 (A**2) : 0.52 REMARK 3 B33 (A**2) : -0.77 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.055 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.034 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.903 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3959 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2648 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5412 ; 1.448 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6399 ; 0.916 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 504 ; 6.075 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 191 ;34.225 ;23.717 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 559 ;10.591 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;14.715 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 558 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4554 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 868 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2416 ; 0.832 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1006 ; 0.239 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3882 ; 1.411 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1543 ; 2.055 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1520 ; 3.203 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2Y8K COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-FEB-11. REMARK 100 THE PDBE ID CODE IS EBI-47296. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.5; 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1; 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : DIAMOND; ESRF REMARK 200 BEAMLINE : I04; ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980; 0.9765 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL; DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS; MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD (QUANTUM 315R) REMARK 200 DETECTOR MANUFACTURER : ADSC; ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94925 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.47 REMARK 200 RESOLUTION RANGE LOW (A) : 36.74 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.90 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.6 REMARK 200 R MERGE FOR SHELL (I) : 0.64 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCDE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: SOLVED BY SAD WITH ASSOCIATED DATASET AND REFINED REMARK 200 TO THE HIGHER RESOLUTION OF THIS DATASET. SELENOMETHIONINE REMARK 200 PROTEIN HAD 2 ENGINEERED METHIONINES IN THE SEQUENCE. REMARK 200 NATIVE DATA IS FROM NATIVE SEQUENCE. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.6 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3000, 150 MM SODIUM REMARK 280 CITRATE, PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.56000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.98500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.77500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.98500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.56000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.77500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 34 REMARK 465 ALA A 284 REMARK 465 TRP A 285 REMARK 465 GLU A 518 REMARK 465 HIS A 519 REMARK 465 HIS A 520 REMARK 465 HIS A 521 REMARK 465 HIS A 522 REMARK 465 HIS A 523 REMARK 465 HIS A 524 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 160 CD CE NZ REMARK 470 GLU A 361 CD OE1 OE2 REMARK 470 ARG A 438 CD NE CZ NH1 NH2 REMARK 470 LEU A 517 CA C O CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 318 CA VAL A 318 CB -0.129 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 69 14.08 -146.09 REMARK 500 PRO A 101 31.61 -99.23 REMARK 500 GLU A 171 71.35 24.90 REMARK 500 TRP A 175 11.92 -141.54 REMARK 500 PHE A 212 -52.07 75.06 REMARK 500 ASN A 247 37.71 -157.82 REMARK 500 PHE A 310 53.42 -90.17 REMARK 500 SER A 319 -106.87 -109.61 REMARK 500 PHE A 328 -71.85 -156.48 REMARK 500 TYR A 402 -59.64 73.01 REMARK 500 ILE A 452 -168.85 -112.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1526 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2535 O REMARK 620 2 ASP A 392 OD1 72.9 REMARK 620 3 ASP A 409 OD2 87.7 93.7 REMARK 620 4 TRP A 424 O 86.3 158.0 92.7 REMARK 620 5 HOH A2506 O 159.2 127.8 88.3 73.5 REMARK 620 6 ASP A 392 OD2 113.8 48.0 71.8 153.2 84.1 REMARK 620 7 GLU A 429 OE1 85.7 86.5 173.1 84.7 97.0 113.0 REMARK 620 8 GLU A 429 OE2 127.9 77.7 136.7 111.1 66.3 71.2 50.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1527 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 396 O REMARK 620 2 GLY A 407 O 106.4 REMARK 620 3 ASP A 392 OD2 160.2 91.9 REMARK 620 4 ASP A 394 O 87.9 96.2 82.6 REMARK 620 5 ASP A 409 OD1 83.9 99.0 100.9 164.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1528 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 509 OD1 REMARK 620 2 GLU A 377 OE1 93.8 REMARK 620 3 GLU A 379 OE1 157.5 101.8 REMARK 620 4 GLU A 379 OE2 154.7 84.8 44.7 REMARK 620 5 HOH A2492 O 102.1 75.2 97.5 53.1 REMARK 620 6 TYR A 420 O 82.7 158.1 88.4 89.2 84.3 REMARK 620 7 ASN A 509 O 75.9 85.6 89.2 129.0 160.6 114.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1529 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 139 OD1 REMARK 620 2 HOH A2193 O 93.0 REMARK 620 3 HOH A2626 O 107.5 89.8 REMARK 620 4 GLY A 136 O 87.1 171.9 97.9 REMARK 620 5 HOH A2195 O 75.9 78.8 168.3 93.4 REMARK 620 6 HOH A2046 O 157.0 81.5 95.0 95.2 81.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1530 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2553 O REMARK 620 2 HOH A2581 O 102.4 REMARK 620 3 LEU A 472 O 78.0 94.3 REMARK 620 4 HOH A2275 O 175.4 76.3 97.7 REMARK 620 5 HOH A2580 O 91.7 164.1 96.0 90.3 REMARK 620 6 HOH A2557 O 87.3 85.9 165.0 96.9 87.2 REMARK 620 N 1 2 3 4 5 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1518 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1519 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1520 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1521 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1522 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1523 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1524 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1525 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1526 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1527 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1528 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1529 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1530 REMARK 999 REMARK 999 SEQUENCE REMARK 999 ONLY GH5 AND CBM6 MODULES WERE CLONED FOR CRYSTALLISATION DBREF 2Y8K A 37 516 UNP A3DHG6 A3DHG6_CLOTH 37 516 SEQADV 2Y8K MET A 34 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K ALA A 35 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K SER A 36 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K LEU A 517 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K GLU A 518 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K HIS A 519 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K HIS A 520 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K HIS A 521 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K HIS A 522 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K HIS A 523 UNP A3DHG6 EXPRESSION TAG SEQADV 2Y8K HIS A 524 UNP A3DHG6 EXPRESSION TAG SEQRES 1 A 491 MET ALA SER SER PRO GLN ARG GLY ARG PRO ARG LEU ASN SEQRES 2 A 491 ALA ALA ARG THR THR PHE VAL GLY ASP ASN GLY GLN PRO SEQRES 3 A 491 LEU ARG GLY PRO TYR THR SER THR GLU TRP THR ALA ALA SEQRES 4 A 491 ALA PRO TYR ASP GLN ILE ALA ARG VAL LYS GLU LEU GLY SEQRES 5 A 491 PHE ASN ALA VAL HIS LEU TYR ALA GLU CYS PHE ASP PRO SEQRES 6 A 491 ARG TYR PRO ALA PRO GLY SER LYS ALA PRO GLY TYR ALA SEQRES 7 A 491 VAL ASN GLU ILE ASP LYS ILE VAL GLU ARG THR ARG GLU SEQRES 8 A 491 LEU GLY LEU TYR LEU VAL ILE THR ILE GLY ASN GLY ALA SEQRES 9 A 491 ASN ASN GLY ASN HIS ASN ALA GLN TRP ALA ARG ASP PHE SEQRES 10 A 491 TRP LYS PHE TYR ALA PRO ARG TYR ALA LYS GLU THR HIS SEQRES 11 A 491 VAL LEU TYR GLU ILE HIS ASN GLU PRO VAL ALA TRP GLY SEQRES 12 A 491 PRO PRO TYR SER SER SER THR ALA ASN PRO PRO GLY ALA SEQRES 13 A 491 VAL ASP MET GLU ILE ASP VAL TYR ARG ILE ILE ARG THR SEQRES 14 A 491 TYR ALA PRO GLU THR PRO VAL LEU LEU PHE SER TYR ALA SEQRES 15 A 491 VAL PHE GLY GLY LYS GLY GLY ALA ALA GLU ALA LEU LYS SEQRES 16 A 491 ASP ILE ARG ALA PHE ASN LYS ALA VAL PHE GLY ASN GLU SEQRES 17 A 491 ASN ALA VAL TRP THR ASN GLU ALA VAL ALA PHE HIS GLY SEQRES 18 A 491 TYR ALA GLY TRP GLN GLU THR THR ILE ALA VAL GLU GLU SEQRES 19 A 491 LEU LEU LYS ALA GLY TYR PRO CYS PHE MET THR GLU TYR SEQRES 20 A 491 ALA GLY GLY ALA TRP GLY SER GLY MET GLY GLY LEU ASP SEQRES 21 A 491 VAL GLU LEU THR TYR GLU LEU GLU ARG LEU GLY VAL SER SEQRES 22 A 491 TRP LEU THR PHE GLN TYR ILE PRO PRO THR GLY VAL SER SEQRES 23 A 491 ASP ASP VAL THR LYS PRO GLU TYR PHE SER ALA LEU VAL SEQRES 24 A 491 GLU ASN SER GLY LEU SER TRP THR PRO ASP TYR GLY ASN SEQRES 25 A 491 TRP PRO ALA ALA ARG GLY VAL TYR GLY ASN GLY GLY LEU SEQRES 26 A 491 ALA ARG GLU THR ALA THR TRP ILE ASN ASN PHE LEU THR SEQRES 27 A 491 GLY THR THR ARG ILE GLU ALA GLU ASP PHE ASP TRP GLY SEQRES 28 A 491 GLY ASN GLY VAL SER TYR TYR ASP THR ASP SER VAL ASN SEQRES 29 A 491 VAL GLY GLY GLN TYR ARG PRO ASP GLU GLY VAL ASP ILE SEQRES 30 A 491 GLU LYS THR SER ASP THR GLY GLY GLY TYR ASN VAL GLY SEQRES 31 A 491 TRP ILE SER GLU GLY GLU TRP LEU GLU TYR THR ILE ARG SEQRES 32 A 491 VAL ARG ASN PRO GLY TYR TYR ASN LEU SER LEU ARG VAL SEQRES 33 A 491 ALA GLY ILE SER GLY SER ARG VAL GLN VAL SER PHE GLY SEQRES 34 A 491 ASN GLN ASP LYS THR GLY VAL TRP GLU LEU PRO ALA THR SEQRES 35 A 491 GLY GLY PHE GLN THR TRP THR THR ALA THR ARG GLN VAL SEQRES 36 A 491 PHE LEU GLY ALA GLY LEU GLN LYS LEU ARG ILE ASN ALA SEQRES 37 A 491 LEU SER GLY GLY PHE ASN LEU ASN TRP ILE GLU LEU SER SEQRES 38 A 491 PRO ILE LEU GLU HIS HIS HIS HIS HIS HIS HET GOL A1518 6 HET GOL A1519 6 HET GOL A1520 6 HET GOL A1521 6 HET GOL A1522 6 HET GOL A1523 6 HET GOL A1524 6 HET GOL A1525 6 HET CA A1526 1 HET NA A1527 1 HET NA A1528 1 HET NA A1529 1 HET NA A1530 1 HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN FORMUL 2 GOL 8(C3 H8 O3) FORMUL 3 CA CA 2+ FORMUL 4 NA 4(NA 1+) FORMUL 5 HOH *625(H2 O) HELIX 1 1 PRO A 74 ALA A 79 1 6 HELIX 2 2 ARG A 80 GLY A 85 5 6 HELIX 3 3 ALA A 111 GLY A 126 1 16 HELIX 4 4 ASN A 143 ALA A 159 1 17 HELIX 5 5 GLY A 188 ALA A 204 1 17 HELIX 6 6 GLY A 218 GLY A 239 1 22 HELIX 7 7 GLY A 257 ALA A 271 1 15 HELIX 8 8 ASP A 293 GLY A 304 1 12 HELIX 9 9 LYS A 324 TYR A 327 5 4 HELIX 10 10 PHE A 328 GLY A 336 1 9 HELIX 11 11 GLY A 354 LEU A 358 5 5 HELIX 12 12 GLU A 379 PHE A 381 5 3 SHEET 1 AA 2 ARG A 44 LEU A 45 0 SHEET 2 AA 2 PHE A 52 VAL A 53 -1 O VAL A 53 N ARG A 44 SHEET 1 AB19 ARG A 61 SER A 66 0 SHEET 2 AB19 SER A 306 TYR A 312 1 O TRP A 307 N GLY A 62 SHEET 3 AB19 ASP A 320 ASP A 321 1 O ASP A 320 N TYR A 312 SHEET 4 AB19 ALA A 88 CYS A 95 0 SHEET 5 AB19 TYR A 128 GLY A 134 0 SHEET 6 AB19 VAL A 164 GLU A 167 0 SHEET 7 AB19 VAL A 209 TYR A 214 0 SHEET 8 AB19 GLU A 248 HIS A 253 0 SHEET 9 AB19 CYS A 275 GLU A 279 0 SHEET 10 AB19 SER A 306 TYR A 312 1 O PHE A 310 N ASP A 320 SHEET 1 AC 2 ARG A 360 GLU A 361 0 SHEET 2 AC 2 TRP A 430 VAL A 437 1 O THR A 434 N ARG A 360 SHEET 1 AD 2 TYR A 390 TYR A 391 0 SHEET 2 AD 2 TRP A 430 VAL A 437 -1 O TRP A 430 N TYR A 391 SHEET 1 AE 2 GLN A 464 ASP A 465 0 SHEET 2 AE 2 ARG A 456 PHE A 461 -1 O PHE A 461 N GLN A 464 SHEET 1 AF 2 TRP A 470 GLU A 471 0 SHEET 2 AF 2 ARG A 456 PHE A 461 -1 O VAL A 457 N TRP A 470 SHEET 1 AG 2 TRP A 365 ILE A 366 0 SHEET 2 AG 2 PHE A 369 LEU A 370 -1 O PHE A 369 N ILE A 366 SHEET 1 AH 4 ARG A 375 GLU A 377 0 SHEET 2 AH 4 PHE A 506 PRO A 515 -1 O ILE A 511 N ILE A 376 SHEET 3 AH 4 GLY A 441 GLY A 451 -1 O ASN A 444 N SER A 514 SHEET 4 AH 4 TRP A 481 LEU A 490 -1 O THR A 482 N VAL A 449 SHEET 1 AI 2 ILE A 410 LYS A 412 0 SHEET 2 AI 2 TYR A 420 VAL A 422 -1 O ASN A 421 N GLU A 411 LINK CA CA A1526 O HOH A2535 1555 1555 2.50 LINK CA CA A1526 OD1 ASP A 392 1555 1555 2.40 LINK CA CA A1526 OD2 ASP A 409 1555 1555 2.27 LINK CA CA A1526 O TRP A 424 1555 1555 2.39 LINK CA CA A1526 O HOH A2506 1555 1555 2.58 LINK CA CA A1526 OD2 ASP A 392 1555 1555 2.88 LINK CA CA A1526 OE1 GLU A 429 1555 1555 2.57 LINK CA CA A1526 OE2 GLU A 429 1555 1555 2.59 LINK NA NA A1527 O VAL A 396 1555 1555 2.31 LINK NA NA A1527 O GLY A 407 1555 1555 2.23 LINK NA NA A1527 OD2 ASP A 392 1555 1555 2.42 LINK NA NA A1527 O ASP A 394 1555 1555 2.37 LINK NA NA A1527 OD1 ASP A 409 1555 1555 2.35 LINK NA NA A1528 O ASN A 509 1555 1555 2.43 LINK NA NA A1528 OE1 GLU A 377 1555 1555 2.41 LINK NA NA A1528 OE1 GLU A 379 1555 1555 2.40 LINK NA NA A1528 OE2 GLU A 379 1555 1555 3.15 LINK NA NA A1528 O HOH A2492 1555 1555 2.63 LINK NA NA A1528 O TYR A 420 1555 1555 2.32 LINK NA NA A1528 OD1 ASN A 509 1555 1555 2.38 LINK NA NA A1529 O HOH A2193 1555 1555 2.29 LINK NA NA A1529 O HOH A2626 1555 1555 2.43 LINK NA NA A1529 O GLY A 136 1555 1555 2.26 LINK NA NA A1529 O HOH A2195 1555 1555 2.84 LINK NA NA A1529 O HOH A2046 1555 4555 2.45 LINK NA NA A1529 OD1 ASN A 139 1555 1555 2.20 LINK NA NA A1530 O HOH A2581 1555 1555 2.77 LINK NA NA A1530 O LEU A 472 1555 1555 2.31 LINK NA NA A1530 O HOH A2275 1555 3554 2.35 LINK NA NA A1530 O HOH A2580 1555 1555 2.36 LINK NA NA A1530 O HOH A2557 1555 1555 2.32 LINK NA NA A1530 O HOH A2553 1555 1555 2.37 CISPEP 1 TYR A 100 PRO A 101 0 7.06 CISPEP 2 ALA A 174 TRP A 175 0 10.99 CISPEP 3 PRO A 177 PRO A 178 0 1.20 CISPEP 4 ASN A 185 PRO A 186 0 1.16 CISPEP 5 PRO A 314 PRO A 315 0 17.36 CISPEP 6 TRP A 346 PRO A 347 0 -3.75 SITE 1 AC1 8 ASP A 76 GLU A 411 GLY A 423 TRP A 424 SITE 2 AC1 8 ASN A 507 HOH A2608 HOH A2617 HOH A2619 SITE 1 AC2 8 TYR A 75 GLU A 120 ARG A 121 GLU A 124 SITE 2 AC2 8 SER A 426 GLU A 427 GLY A 504 HOH A2620 SITE 1 AC3 4 GLY A 384 GLY A 385 ASN A 386 HOH A2497 SITE 1 AC4 3 GLU A 83 GLU A 333 TRP A 346 SITE 1 AC5 6 GLY A 462 GLY A 491 ALA A 492 GLN A 495 SITE 2 AC5 6 HOH A2621 HOH A2622 SITE 1 AC6 2 ARG A 80 HOH A2625 SITE 1 AC7 10 GLU A 68 ASN A 135 GLY A 136 ASN A 139 SITE 2 AC7 10 ASN A 170 PHE A 310 VAL A 318 HOH A2045 SITE 3 AC7 10 HOH A2071 HOH A2370 SITE 1 AC8 5 TRP A 69 HOH A2069 HOH A2157 HOH A2627 SITE 2 AC8 5 HOH A2630 SITE 1 AC9 6 ASP A 392 ASP A 409 TRP A 424 GLU A 429 SITE 2 AC9 6 HOH A2506 HOH A2535 SITE 1 BC1 5 ASP A 392 ASP A 394 VAL A 396 GLY A 407 SITE 2 BC1 5 ASP A 409 SITE 1 BC2 5 GLU A 377 GLU A 379 TYR A 420 ASN A 509 SITE 2 BC2 5 HOH A2492 SITE 1 BC3 6 GLY A 136 ASN A 139 HOH A2046 HOH A2193 SITE 2 BC3 6 HOH A2195 HOH A2626 SITE 1 BC4 6 LEU A 472 HOH A2275 HOH A2553 HOH A2557 SITE 2 BC4 6 HOH A2580 HOH A2581 CRYST1 69.120 75.550 105.970 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014468 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013236 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009437 0.00000