data_2Y92 # _entry.id 2Y92 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Y92 pdb_00002y92 10.2210/pdb2y92/pdb PDBE EBI-47358 ? ? WWPDB D_1290047358 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-14 2 'Structure model' 1 1 2011-10-19 3 'Structure model' 1 2 2023-12-20 4 'Structure model' 1 3 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 3 'Structure model' 'Refinement description' 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site 8 4 'Structure model' pdbx_entry_details 9 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Y92 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-02-11 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Valkov, E.' 1 'Stamp, A.' 2 'Martin, J.L.' 3 'Kobe, B.' 4 # _citation.id primary _citation.title ;Crystal Structure of Toll-Like Receptor Adaptor Mal/Tirap Reveals the Molecular Basis for Signal Transduction and Disease Protection. ; _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 108 _citation.page_first 14879 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21873236 _citation.pdbx_database_id_DOI 10.1073/PNAS.1104780108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Valkov, E.' 1 ? primary 'Stamp, A.' 2 ? primary 'Dimaio, F.' 3 ? primary 'Baker, D.' 4 ? primary 'Verstak, B.' 5 ? primary 'Roversi, P.' 6 ? primary 'Kellie, S.' 7 ? primary 'Sweet, M.J.' 8 ? primary 'Mansell, A.' 9 ? primary 'Gay, N.J.' 10 ? primary 'Martin, J.L.' 11 ? primary 'Kobe, B.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TOLL/INTERLEUKIN-1 RECEPTOR DOMAIN-CONTAINING ADAPTER PROTEIN,' 15913.106 1 ? ? 'TIR DOMAIN, RESIDUES 79-221' 'C91 AND C157 MODIFIED BY DITHIOTHREITOL (DTT)' 2 non-polymer syn 2,3-DIHYDROXY-1,4-DITHIOBUTANE 154.251 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TIR DOMAIN-CONTAINING ADAPTER PROTEIN, ADAPTOR PROTEIN WYATT, MYD88 ADAPTER-LIKE PROTEIN, MAL' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPSSRWSKDYDVCVCHSEEDLVAAQDLVSYLEGSTASLRCFLQLRDATPGGAIVSELCQALSSSHCRVLLITPGFLQDPW CKYQMLQALTEAPGAEGCTIPLLSGLSRAAYPPELRFMYYVDGRGPDGGFRQVKEAVMRYLQTLS ; _entity_poly.pdbx_seq_one_letter_code_can ;GPSSRWSKDYDVCVCHSEEDLVAAQDLVSYLEGSTASLRCFLQLRDATPGGAIVSELCQALSSSHCRVLLITPGFLQDPW CKYQMLQALTEAPGAEGCTIPLLSGLSRAAYPPELRFMYYVDGRGPDGGFRQVKEAVMRYLQTLS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 2,3-DIHYDROXY-1,4-DITHIOBUTANE _pdbx_entity_nonpoly.comp_id DTT # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 SER n 1 4 SER n 1 5 ARG n 1 6 TRP n 1 7 SER n 1 8 LYS n 1 9 ASP n 1 10 TYR n 1 11 ASP n 1 12 VAL n 1 13 CYS n 1 14 VAL n 1 15 CYS n 1 16 HIS n 1 17 SER n 1 18 GLU n 1 19 GLU n 1 20 ASP n 1 21 LEU n 1 22 VAL n 1 23 ALA n 1 24 ALA n 1 25 GLN n 1 26 ASP n 1 27 LEU n 1 28 VAL n 1 29 SER n 1 30 TYR n 1 31 LEU n 1 32 GLU n 1 33 GLY n 1 34 SER n 1 35 THR n 1 36 ALA n 1 37 SER n 1 38 LEU n 1 39 ARG n 1 40 CYS n 1 41 PHE n 1 42 LEU n 1 43 GLN n 1 44 LEU n 1 45 ARG n 1 46 ASP n 1 47 ALA n 1 48 THR n 1 49 PRO n 1 50 GLY n 1 51 GLY n 1 52 ALA n 1 53 ILE n 1 54 VAL n 1 55 SER n 1 56 GLU n 1 57 LEU n 1 58 CYS n 1 59 GLN n 1 60 ALA n 1 61 LEU n 1 62 SER n 1 63 SER n 1 64 SER n 1 65 HIS n 1 66 CYS n 1 67 ARG n 1 68 VAL n 1 69 LEU n 1 70 LEU n 1 71 ILE n 1 72 THR n 1 73 PRO n 1 74 GLY n 1 75 PHE n 1 76 LEU n 1 77 GLN n 1 78 ASP n 1 79 PRO n 1 80 TRP n 1 81 CYS n 1 82 LYS n 1 83 TYR n 1 84 GLN n 1 85 MET n 1 86 LEU n 1 87 GLN n 1 88 ALA n 1 89 LEU n 1 90 THR n 1 91 GLU n 1 92 ALA n 1 93 PRO n 1 94 GLY n 1 95 ALA n 1 96 GLU n 1 97 GLY n 1 98 CYS n 1 99 THR n 1 100 ILE n 1 101 PRO n 1 102 LEU n 1 103 LEU n 1 104 SER n 1 105 GLY n 1 106 LEU n 1 107 SER n 1 108 ARG n 1 109 ALA n 1 110 ALA n 1 111 TYR n 1 112 PRO n 1 113 PRO n 1 114 GLU n 1 115 LEU n 1 116 ARG n 1 117 PHE n 1 118 MET n 1 119 TYR n 1 120 TYR n 1 121 VAL n 1 122 ASP n 1 123 GLY n 1 124 ARG n 1 125 GLY n 1 126 PRO n 1 127 ASP n 1 128 GLY n 1 129 GLY n 1 130 PHE n 1 131 ARG n 1 132 GLN n 1 133 VAL n 1 134 LYS n 1 135 GLU n 1 136 ALA n 1 137 VAL n 1 138 MET n 1 139 ARG n 1 140 TYR n 1 141 LEU n 1 142 GLN n 1 143 THR n 1 144 LEU n 1 145 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DTT non-polymer . 2,3-DIHYDROXY-1,4-DITHIOBUTANE 1,4-DITHIOTHREITOL 'C4 H10 O2 S2' 154.251 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 77 ? ? ? A . n A 1 2 PRO 2 78 ? ? ? A . n A 1 3 SER 3 79 79 SER SER A . n A 1 4 SER 4 80 80 SER SER A . n A 1 5 ARG 5 81 81 ARG ARG A . n A 1 6 TRP 6 82 82 TRP TRP A . n A 1 7 SER 7 83 83 SER SER A . n A 1 8 LYS 8 84 84 LYS LYS A . n A 1 9 ASP 9 85 85 ASP ASP A . n A 1 10 TYR 10 86 86 TYR TYR A . n A 1 11 ASP 11 87 87 ASP ASP A . n A 1 12 VAL 12 88 88 VAL VAL A . n A 1 13 CYS 13 89 89 CYS CYS A . n A 1 14 VAL 14 90 90 VAL VAL A . n A 1 15 CYS 15 91 91 CYS CYS A . n A 1 16 HIS 16 92 92 HIS HIS A . n A 1 17 SER 17 93 93 SER SER A . n A 1 18 GLU 18 94 94 GLU GLU A . n A 1 19 GLU 19 95 95 GLU GLU A . n A 1 20 ASP 20 96 96 ASP ASP A . n A 1 21 LEU 21 97 97 LEU LEU A . n A 1 22 VAL 22 98 98 VAL VAL A . n A 1 23 ALA 23 99 99 ALA ALA A . n A 1 24 ALA 24 100 100 ALA ALA A . n A 1 25 GLN 25 101 101 GLN GLN A . n A 1 26 ASP 26 102 102 ASP ASP A . n A 1 27 LEU 27 103 103 LEU LEU A . n A 1 28 VAL 28 104 104 VAL VAL A . n A 1 29 SER 29 105 105 SER SER A . n A 1 30 TYR 30 106 106 TYR TYR A . n A 1 31 LEU 31 107 107 LEU LEU A . n A 1 32 GLU 32 108 108 GLU GLU A . n A 1 33 GLY 33 109 109 GLY GLY A . n A 1 34 SER 34 110 110 SER SER A . n A 1 35 THR 35 111 111 THR THR A . n A 1 36 ALA 36 112 ? ? ? A . n A 1 37 SER 37 113 ? ? ? A . n A 1 38 LEU 38 114 ? ? ? A . n A 1 39 ARG 39 115 ? ? ? A . n A 1 40 CYS 40 116 ? ? ? A . n A 1 41 PHE 41 117 ? ? ? A . n A 1 42 LEU 42 118 ? ? ? A . n A 1 43 GLN 43 119 ? ? ? A . n A 1 44 LEU 44 120 ? ? ? A . n A 1 45 ARG 45 121 ? ? ? A . n A 1 46 ASP 46 122 ? ? ? A . n A 1 47 ALA 47 123 ? ? ? A . n A 1 48 THR 48 124 124 THR THR A . n A 1 49 PRO 49 125 125 PRO PRO A . n A 1 50 GLY 50 126 126 GLY GLY A . n A 1 51 GLY 51 127 127 GLY GLY A . n A 1 52 ALA 52 128 128 ALA ALA A . n A 1 53 ILE 53 129 129 ILE ILE A . n A 1 54 VAL 54 130 130 VAL VAL A . n A 1 55 SER 55 131 131 SER SER A . n A 1 56 GLU 56 132 132 GLU GLU A . n A 1 57 LEU 57 133 133 LEU LEU A . n A 1 58 CYS 58 134 134 CYS CYS A . n A 1 59 GLN 59 135 135 GLN GLN A . n A 1 60 ALA 60 136 136 ALA ALA A . n A 1 61 LEU 61 137 137 LEU LEU A . n A 1 62 SER 62 138 138 SER SER A . n A 1 63 SER 63 139 139 SER SER A . n A 1 64 SER 64 140 140 SER SER A . n A 1 65 HIS 65 141 141 HIS HIS A . n A 1 66 CYS 66 142 142 CYS CYS A . n A 1 67 ARG 67 143 143 ARG ARG A . n A 1 68 VAL 68 144 144 VAL VAL A . n A 1 69 LEU 69 145 145 LEU LEU A . n A 1 70 LEU 70 146 146 LEU LEU A . n A 1 71 ILE 71 147 147 ILE ILE A . n A 1 72 THR 72 148 148 THR THR A . n A 1 73 PRO 73 149 149 PRO PRO A . n A 1 74 GLY 74 150 150 GLY GLY A . n A 1 75 PHE 75 151 151 PHE PHE A . n A 1 76 LEU 76 152 152 LEU LEU A . n A 1 77 GLN 77 153 153 GLN GLN A . n A 1 78 ASP 78 154 154 ASP ASP A . n A 1 79 PRO 79 155 155 PRO PRO A . n A 1 80 TRP 80 156 156 TRP TRP A . n A 1 81 CYS 81 157 157 CYS CYS A . n A 1 82 LYS 82 158 158 LYS LYS A . n A 1 83 TYR 83 159 159 TYR TYR A . n A 1 84 GLN 84 160 160 GLN GLN A . n A 1 85 MET 85 161 161 MET MET A . n A 1 86 LEU 86 162 162 LEU LEU A . n A 1 87 GLN 87 163 163 GLN GLN A . n A 1 88 ALA 88 164 164 ALA ALA A . n A 1 89 LEU 89 165 165 LEU LEU A . n A 1 90 THR 90 166 166 THR THR A . n A 1 91 GLU 91 167 167 GLU GLU A . n A 1 92 ALA 92 168 ? ? ? A . n A 1 93 PRO 93 169 ? ? ? A . n A 1 94 GLY 94 170 ? ? ? A . n A 1 95 ALA 95 171 ? ? ? A . n A 1 96 GLU 96 172 172 GLU GLU A . n A 1 97 GLY 97 173 173 GLY GLY A . n A 1 98 CYS 98 174 174 CYS CYS A . n A 1 99 THR 99 175 175 THR THR A . n A 1 100 ILE 100 176 176 ILE ILE A . n A 1 101 PRO 101 177 177 PRO PRO A . n A 1 102 LEU 102 178 178 LEU LEU A . n A 1 103 LEU 103 179 179 LEU LEU A . n A 1 104 SER 104 180 180 SER SER A . n A 1 105 GLY 105 181 181 GLY GLY A . n A 1 106 LEU 106 182 182 LEU LEU A . n A 1 107 SER 107 183 183 SER SER A . n A 1 108 ARG 108 184 184 ARG ARG A . n A 1 109 ALA 109 185 185 ALA ALA A . n A 1 110 ALA 110 186 186 ALA ALA A . n A 1 111 TYR 111 187 187 TYR TYR A . n A 1 112 PRO 112 188 188 PRO PRO A . n A 1 113 PRO 113 189 189 PRO PRO A . n A 1 114 GLU 114 190 190 GLU GLU A . n A 1 115 LEU 115 191 191 LEU LEU A . n A 1 116 ARG 116 192 192 ARG ARG A . n A 1 117 PHE 117 193 193 PHE PHE A . n A 1 118 MET 118 194 194 MET MET A . n A 1 119 TYR 119 195 195 TYR TYR A . n A 1 120 TYR 120 196 196 TYR TYR A . n A 1 121 VAL 121 197 197 VAL VAL A . n A 1 122 ASP 122 198 198 ASP ASP A . n A 1 123 GLY 123 199 199 GLY GLY A . n A 1 124 ARG 124 200 200 ARG ARG A . n A 1 125 GLY 125 201 201 GLY GLY A . n A 1 126 PRO 126 202 202 PRO PRO A . n A 1 127 ASP 127 203 203 ASP ASP A . n A 1 128 GLY 128 204 204 GLY GLY A . n A 1 129 GLY 129 205 205 GLY GLY A . n A 1 130 PHE 130 206 206 PHE PHE A . n A 1 131 ARG 131 207 207 ARG ARG A . n A 1 132 GLN 132 208 208 GLN GLN A . n A 1 133 VAL 133 209 209 VAL VAL A . n A 1 134 LYS 134 210 210 LYS LYS A . n A 1 135 GLU 135 211 211 GLU GLU A . n A 1 136 ALA 136 212 212 ALA ALA A . n A 1 137 VAL 137 213 213 VAL VAL A . n A 1 138 MET 138 214 214 MET MET A . n A 1 139 ARG 139 215 215 ARG ARG A . n A 1 140 TYR 140 216 216 TYR TYR A . n A 1 141 LEU 141 217 217 LEU LEU A . n A 1 142 GLN 142 218 218 GLN GLN A . n A 1 143 THR 143 219 219 THR THR A . n A 1 144 LEU 144 220 220 LEU LEU A . n A 1 145 SER 145 221 221 SER SER A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id DTT _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 300 _pdbx_nonpoly_scheme.auth_seq_num 300 _pdbx_nonpoly_scheme.pdb_mon_id DTT _pdbx_nonpoly_scheme.auth_mon_id DTT _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 111 ? CB ? A THR 35 CB 2 1 Y 1 A THR 111 ? OG1 ? A THR 35 OG1 3 1 Y 1 A THR 111 ? CG2 ? A THR 35 CG2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BUSTER refinement 2.8.0 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHENIX phasing . ? 4 # _cell.entry_id 2Y92 _cell.length_a 88.146 _cell.length_b 88.146 _cell.length_c 78.793 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Y92 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 2Y92 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.81 _exptl_crystal.density_percent_sol 77 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ADSC _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0722 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_wavelength 1.0722 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2Y92 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 3.00 _reflns.number_obs 6390 _reflns.number_all ? _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.50 _reflns.B_iso_Wilson_estimate 112.82 _reflns.pdbx_redundancy 13.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.01 _reflns_shell.d_res_low 3.37 _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.00 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2Y92 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6390 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.88 _refine.ls_d_res_high 3.01 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2310 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2300 _refine.ls_R_factor_R_free 0.2506 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.79 _refine.ls_number_reflns_R_free 306 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.9201 _refine.correlation_coeff_Fo_to_Fc_free 0.8969 _refine.B_iso_mean 94.99 _refine.aniso_B[1][1] 0.9298 _refine.aniso_B[2][2] 0.9298 _refine.aniso_B[3][3] -1.8596 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'IDEAL-DIST CONTACT TERM CONTACT SETUP. ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY' _refine.pdbx_starting_model 'PDB ENTRY 2Z5V' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2Y92 _refine_analyze.Luzzati_coordinate_error_obs 0.753 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 981 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 989 _refine_hist.d_res_high 3.01 _refine_hist.d_res_low 48.88 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.007 ? 2.00 1012 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 0.89 ? 2.00 1371 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 345 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 22 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 145 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 1005 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 1.56 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 19.86 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 126 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 1050 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.d_res_high 3.01 _refine_ls_shell.d_res_low 3.37 _refine_ls_shell.number_reflns_R_work 1661 _refine_ls_shell.R_factor_R_work 0.2712 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2857 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 4.60 _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_all 1741 _refine_ls_shell.R_factor_all 0.2718 # _database_PDB_matrix.entry_id 2Y92 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2Y92 _struct.title 'Crystal structure of MAL adaptor protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Y92 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'IMMUNE SYSTEM, TOLL-LIKE RECEPTOR SIGNALING, INNATE IMMUNITY' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TIRAP_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P58753 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2Y92 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 145 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P58753 _struct_ref_seq.db_align_beg 79 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 221 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 79 _struct_ref_seq.pdbx_auth_seq_align_end 221 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2Y92 GLY A 1 ? UNP P58753 ? ? 'expression tag' 77 1 1 2Y92 PRO A 2 ? UNP P58753 ? ? 'expression tag' 78 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2190 ? 1 MORE -24.1 ? 1 'SSA (A^2)' 13840 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -39.3965000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 21 ? GLU A 32 ? LEU A 97 GLU A 108 1 ? 12 HELX_P HELX_P2 2 PRO A 73 ? GLN A 77 ? PRO A 149 GLN A 153 1 ? 5 HELX_P HELX_P3 3 PRO A 79 ? LEU A 89 ? PRO A 155 LEU A 165 1 ? 11 HELX_P HELX_P4 4 PHE A 130 ? THR A 143 ? PHE A 206 THR A 219 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 13 SG ? ? ? 1_555 A CYS 58 SG ? ? A CYS 89 A CYS 134 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 66 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 142 A CYS 174 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale none ? A CYS 15 SG ? ? ? 1_555 B DTT . S4 ? ? A CYS 91 A DTT 300 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale2 covale none ? A CYS 81 SG ? ? ? 1_555 B DTT . S1 ? ? A CYS 157 A DTT 300 1_555 ? ? ? ? ? ? ? 1.802 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 DTT B . ? CYS A 81 ? DTT A 300 ? 1_555 CYS A 157 ? 1_555 S1 SG CYS 1 DTT None Crosslinker 2 DTT B . ? CYS A 15 ? DTT A 300 ? 1_555 CYS A 91 ? 1_555 S4 SG CYS 2 DTT None Crosslinker 3 CYS A 13 ? CYS A 58 ? CYS A 89 ? 1_555 CYS A 134 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 66 ? CYS A 98 ? CYS A 142 ? 1_555 CYS A 174 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details 1 ? 1 ? 2 ? 1 ? 3 ? 1 ? 4 ? 1 ? 5 ? 1 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1 1 TYR A 10 ? CYS A 15 ? TYR A 86 CYS A 91 2 1 SER A 55 ? LEU A 57 ? SER A 131 LEU A 133 3 1 SER A 64 ? ILE A 71 ? SER A 140 ILE A 147 4 1 THR A 99 ? LEU A 103 ? THR A 175 LEU A 179 5 1 VAL A 121 ? ASP A 122 ? VAL A 197 ASP A 198 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id DTT _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE DTT A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS A 15 ? CYS A 91 . ? 1_555 ? 2 AC1 5 HIS A 16 ? HIS A 92 . ? 1_555 ? 3 AC1 5 ARG A 67 ? ARG A 143 . ? 1_555 ? 4 AC1 5 CYS A 81 ? CYS A 157 . ? 1_555 ? 5 AC1 5 GLN A 84 ? GLN A 160 . ? 1_555 ? # _pdbx_entry_details.entry_id 2Y92 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 96 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -96.61 _pdbx_validate_torsion.psi 46.05 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -14.0309 35.7406 -5.5216 -0.0674 -0.1590 -0.1965 0.0077 -0.0255 -0.0495 11.8850 10.1244 8.1053 -3.8677 0.4111 3.2650 -0.0241 -0.1832 0.1223 0.1277 0.0854 0.0859 -0.2805 -0.1634 -0.0613 'X-RAY DIFFRACTION' 2 ? refined -10.4433 21.9789 -11.2419 -0.0522 -0.2105 -0.0398 0.0007 0.0457 0.0982 0.0000 0.1795 0.3409 -0.2911 2.1763 1.9497 -0.0158 -0.0887 -0.2872 0.0051 -0.0317 -0.1581 0.1772 0.0701 0.0474 'X-RAY DIFFRACTION' 3 ? refined -18.2357 24.2582 -14.3409 0.0627 -0.1015 0.0124 -0.2405 0.0993 0.0199 4.5447 4.7934 1.9491 5.8116 -2.5469 5.3316 -0.0395 0.0856 0.0552 -0.1347 -0.0171 0.2516 -0.0455 -0.1448 0.0566 'X-RAY DIFFRACTION' 4 ? refined -7.8898 31.4151 -18.6201 -0.0341 -0.1231 0.0853 -0.1442 0.1384 0.0684 6.2769 0.0657 7.4493 -1.1967 -0.6560 2.8822 -0.0526 0.0676 0.1264 -0.0260 0.3032 0.0500 -0.3581 0.0513 -0.2506 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(A79 - A142 )' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(A143 - A153 )' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(A154 - A179 )' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(A180 - A220 )' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; 700 ; SHEET DETERMINATION METHOD: AUTHOR PROVIDED. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 77 ? A GLY 1 2 1 Y 1 A PRO 78 ? A PRO 2 3 1 Y 1 A ALA 112 ? A ALA 36 4 1 Y 1 A SER 113 ? A SER 37 5 1 Y 1 A LEU 114 ? A LEU 38 6 1 Y 1 A ARG 115 ? A ARG 39 7 1 Y 1 A CYS 116 ? A CYS 40 8 1 Y 1 A PHE 117 ? A PHE 41 9 1 Y 1 A LEU 118 ? A LEU 42 10 1 Y 1 A GLN 119 ? A GLN 43 11 1 Y 1 A LEU 120 ? A LEU 44 12 1 Y 1 A ARG 121 ? A ARG 45 13 1 Y 1 A ASP 122 ? A ASP 46 14 1 Y 1 A ALA 123 ? A ALA 47 15 1 Y 1 A ALA 168 ? A ALA 92 16 1 Y 1 A PRO 169 ? A PRO 93 17 1 Y 1 A GLY 170 ? A GLY 94 18 1 Y 1 A ALA 171 ? A ALA 95 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 CYS N N N N 57 CYS CA C N R 58 CYS C C N N 59 CYS O O N N 60 CYS CB C N N 61 CYS SG S N N 62 CYS OXT O N N 63 CYS H H N N 64 CYS H2 H N N 65 CYS HA H N N 66 CYS HB2 H N N 67 CYS HB3 H N N 68 CYS HG H N N 69 CYS HXT H N N 70 DTT S1 S N N 71 DTT C1 C N N 72 DTT C2 C N R 73 DTT O2 O N N 74 DTT C3 C N R 75 DTT O3 O N N 76 DTT C4 C N N 77 DTT S4 S N N 78 DTT HS1 H N N 79 DTT H11 H N N 80 DTT H12 H N N 81 DTT H2 H N N 82 DTT HO2 H N N 83 DTT H3 H N N 84 DTT HO3 H N N 85 DTT H41 H N N 86 DTT H42 H N N 87 DTT HS2 H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 ILE N N N N 159 ILE CA C N S 160 ILE C C N N 161 ILE O O N N 162 ILE CB C N S 163 ILE CG1 C N N 164 ILE CG2 C N N 165 ILE CD1 C N N 166 ILE OXT O N N 167 ILE H H N N 168 ILE H2 H N N 169 ILE HA H N N 170 ILE HB H N N 171 ILE HG12 H N N 172 ILE HG13 H N N 173 ILE HG21 H N N 174 ILE HG22 H N N 175 ILE HG23 H N N 176 ILE HD11 H N N 177 ILE HD12 H N N 178 ILE HD13 H N N 179 ILE HXT H N N 180 LEU N N N N 181 LEU CA C N S 182 LEU C C N N 183 LEU O O N N 184 LEU CB C N N 185 LEU CG C N N 186 LEU CD1 C N N 187 LEU CD2 C N N 188 LEU OXT O N N 189 LEU H H N N 190 LEU H2 H N N 191 LEU HA H N N 192 LEU HB2 H N N 193 LEU HB3 H N N 194 LEU HG H N N 195 LEU HD11 H N N 196 LEU HD12 H N N 197 LEU HD13 H N N 198 LEU HD21 H N N 199 LEU HD22 H N N 200 LEU HD23 H N N 201 LEU HXT H N N 202 LYS N N N N 203 LYS CA C N S 204 LYS C C N N 205 LYS O O N N 206 LYS CB C N N 207 LYS CG C N N 208 LYS CD C N N 209 LYS CE C N N 210 LYS NZ N N N 211 LYS OXT O N N 212 LYS H H N N 213 LYS H2 H N N 214 LYS HA H N N 215 LYS HB2 H N N 216 LYS HB3 H N N 217 LYS HG2 H N N 218 LYS HG3 H N N 219 LYS HD2 H N N 220 LYS HD3 H N N 221 LYS HE2 H N N 222 LYS HE3 H N N 223 LYS HZ1 H N N 224 LYS HZ2 H N N 225 LYS HZ3 H N N 226 LYS HXT H N N 227 MET N N N N 228 MET CA C N S 229 MET C C N N 230 MET O O N N 231 MET CB C N N 232 MET CG C N N 233 MET SD S N N 234 MET CE C N N 235 MET OXT O N N 236 MET H H N N 237 MET H2 H N N 238 MET HA H N N 239 MET HB2 H N N 240 MET HB3 H N N 241 MET HG2 H N N 242 MET HG3 H N N 243 MET HE1 H N N 244 MET HE2 H N N 245 MET HE3 H N N 246 MET HXT H N N 247 PHE N N N N 248 PHE CA C N S 249 PHE C C N N 250 PHE O O N N 251 PHE CB C N N 252 PHE CG C Y N 253 PHE CD1 C Y N 254 PHE CD2 C Y N 255 PHE CE1 C Y N 256 PHE CE2 C Y N 257 PHE CZ C Y N 258 PHE OXT O N N 259 PHE H H N N 260 PHE H2 H N N 261 PHE HA H N N 262 PHE HB2 H N N 263 PHE HB3 H N N 264 PHE HD1 H N N 265 PHE HD2 H N N 266 PHE HE1 H N N 267 PHE HE2 H N N 268 PHE HZ H N N 269 PHE HXT H N N 270 PRO N N N N 271 PRO CA C N S 272 PRO C C N N 273 PRO O O N N 274 PRO CB C N N 275 PRO CG C N N 276 PRO CD C N N 277 PRO OXT O N N 278 PRO H H N N 279 PRO HA H N N 280 PRO HB2 H N N 281 PRO HB3 H N N 282 PRO HG2 H N N 283 PRO HG3 H N N 284 PRO HD2 H N N 285 PRO HD3 H N N 286 PRO HXT H N N 287 SER N N N N 288 SER CA C N S 289 SER C C N N 290 SER O O N N 291 SER CB C N N 292 SER OG O N N 293 SER OXT O N N 294 SER H H N N 295 SER H2 H N N 296 SER HA H N N 297 SER HB2 H N N 298 SER HB3 H N N 299 SER HG H N N 300 SER HXT H N N 301 THR N N N N 302 THR CA C N S 303 THR C C N N 304 THR O O N N 305 THR CB C N R 306 THR OG1 O N N 307 THR CG2 C N N 308 THR OXT O N N 309 THR H H N N 310 THR H2 H N N 311 THR HA H N N 312 THR HB H N N 313 THR HG1 H N N 314 THR HG21 H N N 315 THR HG22 H N N 316 THR HG23 H N N 317 THR HXT H N N 318 TRP N N N N 319 TRP CA C N S 320 TRP C C N N 321 TRP O O N N 322 TRP CB C N N 323 TRP CG C Y N 324 TRP CD1 C Y N 325 TRP CD2 C Y N 326 TRP NE1 N Y N 327 TRP CE2 C Y N 328 TRP CE3 C Y N 329 TRP CZ2 C Y N 330 TRP CZ3 C Y N 331 TRP CH2 C Y N 332 TRP OXT O N N 333 TRP H H N N 334 TRP H2 H N N 335 TRP HA H N N 336 TRP HB2 H N N 337 TRP HB3 H N N 338 TRP HD1 H N N 339 TRP HE1 H N N 340 TRP HE3 H N N 341 TRP HZ2 H N N 342 TRP HZ3 H N N 343 TRP HH2 H N N 344 TRP HXT H N N 345 TYR N N N N 346 TYR CA C N S 347 TYR C C N N 348 TYR O O N N 349 TYR CB C N N 350 TYR CG C Y N 351 TYR CD1 C Y N 352 TYR CD2 C Y N 353 TYR CE1 C Y N 354 TYR CE2 C Y N 355 TYR CZ C Y N 356 TYR OH O N N 357 TYR OXT O N N 358 TYR H H N N 359 TYR H2 H N N 360 TYR HA H N N 361 TYR HB2 H N N 362 TYR HB3 H N N 363 TYR HD1 H N N 364 TYR HD2 H N N 365 TYR HE1 H N N 366 TYR HE2 H N N 367 TYR HH H N N 368 TYR HXT H N N 369 VAL N N N N 370 VAL CA C N S 371 VAL C C N N 372 VAL O O N N 373 VAL CB C N N 374 VAL CG1 C N N 375 VAL CG2 C N N 376 VAL OXT O N N 377 VAL H H N N 378 VAL H2 H N N 379 VAL HA H N N 380 VAL HB H N N 381 VAL HG11 H N N 382 VAL HG12 H N N 383 VAL HG13 H N N 384 VAL HG21 H N N 385 VAL HG22 H N N 386 VAL HG23 H N N 387 VAL HXT H N N 388 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 CYS N CA sing N N 54 CYS N H sing N N 55 CYS N H2 sing N N 56 CYS CA C sing N N 57 CYS CA CB sing N N 58 CYS CA HA sing N N 59 CYS C O doub N N 60 CYS C OXT sing N N 61 CYS CB SG sing N N 62 CYS CB HB2 sing N N 63 CYS CB HB3 sing N N 64 CYS SG HG sing N N 65 CYS OXT HXT sing N N 66 DTT S1 C1 sing N N 67 DTT S1 HS1 sing N N 68 DTT C1 C2 sing N N 69 DTT C1 H11 sing N N 70 DTT C1 H12 sing N N 71 DTT C2 O2 sing N N 72 DTT C2 C3 sing N N 73 DTT C2 H2 sing N N 74 DTT O2 HO2 sing N N 75 DTT C3 O3 sing N N 76 DTT C3 C4 sing N N 77 DTT C3 H3 sing N N 78 DTT O3 HO3 sing N N 79 DTT C4 S4 sing N N 80 DTT C4 H41 sing N N 81 DTT C4 H42 sing N N 82 DTT S4 HS2 sing N N 83 GLN N CA sing N N 84 GLN N H sing N N 85 GLN N H2 sing N N 86 GLN CA C sing N N 87 GLN CA CB sing N N 88 GLN CA HA sing N N 89 GLN C O doub N N 90 GLN C OXT sing N N 91 GLN CB CG sing N N 92 GLN CB HB2 sing N N 93 GLN CB HB3 sing N N 94 GLN CG CD sing N N 95 GLN CG HG2 sing N N 96 GLN CG HG3 sing N N 97 GLN CD OE1 doub N N 98 GLN CD NE2 sing N N 99 GLN NE2 HE21 sing N N 100 GLN NE2 HE22 sing N N 101 GLN OXT HXT sing N N 102 GLU N CA sing N N 103 GLU N H sing N N 104 GLU N H2 sing N N 105 GLU CA C sing N N 106 GLU CA CB sing N N 107 GLU CA HA sing N N 108 GLU C O doub N N 109 GLU C OXT sing N N 110 GLU CB CG sing N N 111 GLU CB HB2 sing N N 112 GLU CB HB3 sing N N 113 GLU CG CD sing N N 114 GLU CG HG2 sing N N 115 GLU CG HG3 sing N N 116 GLU CD OE1 doub N N 117 GLU CD OE2 sing N N 118 GLU OE2 HE2 sing N N 119 GLU OXT HXT sing N N 120 GLY N CA sing N N 121 GLY N H sing N N 122 GLY N H2 sing N N 123 GLY CA C sing N N 124 GLY CA HA2 sing N N 125 GLY CA HA3 sing N N 126 GLY C O doub N N 127 GLY C OXT sing N N 128 GLY OXT HXT sing N N 129 HIS N CA sing N N 130 HIS N H sing N N 131 HIS N H2 sing N N 132 HIS CA C sing N N 133 HIS CA CB sing N N 134 HIS CA HA sing N N 135 HIS C O doub N N 136 HIS C OXT sing N N 137 HIS CB CG sing N N 138 HIS CB HB2 sing N N 139 HIS CB HB3 sing N N 140 HIS CG ND1 sing Y N 141 HIS CG CD2 doub Y N 142 HIS ND1 CE1 doub Y N 143 HIS ND1 HD1 sing N N 144 HIS CD2 NE2 sing Y N 145 HIS CD2 HD2 sing N N 146 HIS CE1 NE2 sing Y N 147 HIS CE1 HE1 sing N N 148 HIS NE2 HE2 sing N N 149 HIS OXT HXT sing N N 150 ILE N CA sing N N 151 ILE N H sing N N 152 ILE N H2 sing N N 153 ILE CA C sing N N 154 ILE CA CB sing N N 155 ILE CA HA sing N N 156 ILE C O doub N N 157 ILE C OXT sing N N 158 ILE CB CG1 sing N N 159 ILE CB CG2 sing N N 160 ILE CB HB sing N N 161 ILE CG1 CD1 sing N N 162 ILE CG1 HG12 sing N N 163 ILE CG1 HG13 sing N N 164 ILE CG2 HG21 sing N N 165 ILE CG2 HG22 sing N N 166 ILE CG2 HG23 sing N N 167 ILE CD1 HD11 sing N N 168 ILE CD1 HD12 sing N N 169 ILE CD1 HD13 sing N N 170 ILE OXT HXT sing N N 171 LEU N CA sing N N 172 LEU N H sing N N 173 LEU N H2 sing N N 174 LEU CA C sing N N 175 LEU CA CB sing N N 176 LEU CA HA sing N N 177 LEU C O doub N N 178 LEU C OXT sing N N 179 LEU CB CG sing N N 180 LEU CB HB2 sing N N 181 LEU CB HB3 sing N N 182 LEU CG CD1 sing N N 183 LEU CG CD2 sing N N 184 LEU CG HG sing N N 185 LEU CD1 HD11 sing N N 186 LEU CD1 HD12 sing N N 187 LEU CD1 HD13 sing N N 188 LEU CD2 HD21 sing N N 189 LEU CD2 HD22 sing N N 190 LEU CD2 HD23 sing N N 191 LEU OXT HXT sing N N 192 LYS N CA sing N N 193 LYS N H sing N N 194 LYS N H2 sing N N 195 LYS CA C sing N N 196 LYS CA CB sing N N 197 LYS CA HA sing N N 198 LYS C O doub N N 199 LYS C OXT sing N N 200 LYS CB CG sing N N 201 LYS CB HB2 sing N N 202 LYS CB HB3 sing N N 203 LYS CG CD sing N N 204 LYS CG HG2 sing N N 205 LYS CG HG3 sing N N 206 LYS CD CE sing N N 207 LYS CD HD2 sing N N 208 LYS CD HD3 sing N N 209 LYS CE NZ sing N N 210 LYS CE HE2 sing N N 211 LYS CE HE3 sing N N 212 LYS NZ HZ1 sing N N 213 LYS NZ HZ2 sing N N 214 LYS NZ HZ3 sing N N 215 LYS OXT HXT sing N N 216 MET N CA sing N N 217 MET N H sing N N 218 MET N H2 sing N N 219 MET CA C sing N N 220 MET CA CB sing N N 221 MET CA HA sing N N 222 MET C O doub N N 223 MET C OXT sing N N 224 MET CB CG sing N N 225 MET CB HB2 sing N N 226 MET CB HB3 sing N N 227 MET CG SD sing N N 228 MET CG HG2 sing N N 229 MET CG HG3 sing N N 230 MET SD CE sing N N 231 MET CE HE1 sing N N 232 MET CE HE2 sing N N 233 MET CE HE3 sing N N 234 MET OXT HXT sing N N 235 PHE N CA sing N N 236 PHE N H sing N N 237 PHE N H2 sing N N 238 PHE CA C sing N N 239 PHE CA CB sing N N 240 PHE CA HA sing N N 241 PHE C O doub N N 242 PHE C OXT sing N N 243 PHE CB CG sing N N 244 PHE CB HB2 sing N N 245 PHE CB HB3 sing N N 246 PHE CG CD1 doub Y N 247 PHE CG CD2 sing Y N 248 PHE CD1 CE1 sing Y N 249 PHE CD1 HD1 sing N N 250 PHE CD2 CE2 doub Y N 251 PHE CD2 HD2 sing N N 252 PHE CE1 CZ doub Y N 253 PHE CE1 HE1 sing N N 254 PHE CE2 CZ sing Y N 255 PHE CE2 HE2 sing N N 256 PHE CZ HZ sing N N 257 PHE OXT HXT sing N N 258 PRO N CA sing N N 259 PRO N CD sing N N 260 PRO N H sing N N 261 PRO CA C sing N N 262 PRO CA CB sing N N 263 PRO CA HA sing N N 264 PRO C O doub N N 265 PRO C OXT sing N N 266 PRO CB CG sing N N 267 PRO CB HB2 sing N N 268 PRO CB HB3 sing N N 269 PRO CG CD sing N N 270 PRO CG HG2 sing N N 271 PRO CG HG3 sing N N 272 PRO CD HD2 sing N N 273 PRO CD HD3 sing N N 274 PRO OXT HXT sing N N 275 SER N CA sing N N 276 SER N H sing N N 277 SER N H2 sing N N 278 SER CA C sing N N 279 SER CA CB sing N N 280 SER CA HA sing N N 281 SER C O doub N N 282 SER C OXT sing N N 283 SER CB OG sing N N 284 SER CB HB2 sing N N 285 SER CB HB3 sing N N 286 SER OG HG sing N N 287 SER OXT HXT sing N N 288 THR N CA sing N N 289 THR N H sing N N 290 THR N H2 sing N N 291 THR CA C sing N N 292 THR CA CB sing N N 293 THR CA HA sing N N 294 THR C O doub N N 295 THR C OXT sing N N 296 THR CB OG1 sing N N 297 THR CB CG2 sing N N 298 THR CB HB sing N N 299 THR OG1 HG1 sing N N 300 THR CG2 HG21 sing N N 301 THR CG2 HG22 sing N N 302 THR CG2 HG23 sing N N 303 THR OXT HXT sing N N 304 TRP N CA sing N N 305 TRP N H sing N N 306 TRP N H2 sing N N 307 TRP CA C sing N N 308 TRP CA CB sing N N 309 TRP CA HA sing N N 310 TRP C O doub N N 311 TRP C OXT sing N N 312 TRP CB CG sing N N 313 TRP CB HB2 sing N N 314 TRP CB HB3 sing N N 315 TRP CG CD1 doub Y N 316 TRP CG CD2 sing Y N 317 TRP CD1 NE1 sing Y N 318 TRP CD1 HD1 sing N N 319 TRP CD2 CE2 doub Y N 320 TRP CD2 CE3 sing Y N 321 TRP NE1 CE2 sing Y N 322 TRP NE1 HE1 sing N N 323 TRP CE2 CZ2 sing Y N 324 TRP CE3 CZ3 doub Y N 325 TRP CE3 HE3 sing N N 326 TRP CZ2 CH2 doub Y N 327 TRP CZ2 HZ2 sing N N 328 TRP CZ3 CH2 sing Y N 329 TRP CZ3 HZ3 sing N N 330 TRP CH2 HH2 sing N N 331 TRP OXT HXT sing N N 332 TYR N CA sing N N 333 TYR N H sing N N 334 TYR N H2 sing N N 335 TYR CA C sing N N 336 TYR CA CB sing N N 337 TYR CA HA sing N N 338 TYR C O doub N N 339 TYR C OXT sing N N 340 TYR CB CG sing N N 341 TYR CB HB2 sing N N 342 TYR CB HB3 sing N N 343 TYR CG CD1 doub Y N 344 TYR CG CD2 sing Y N 345 TYR CD1 CE1 sing Y N 346 TYR CD1 HD1 sing N N 347 TYR CD2 CE2 doub Y N 348 TYR CD2 HD2 sing N N 349 TYR CE1 CZ doub Y N 350 TYR CE1 HE1 sing N N 351 TYR CE2 CZ sing Y N 352 TYR CE2 HE2 sing N N 353 TYR CZ OH sing N N 354 TYR OH HH sing N N 355 TYR OXT HXT sing N N 356 VAL N CA sing N N 357 VAL N H sing N N 358 VAL N H2 sing N N 359 VAL CA C sing N N 360 VAL CA CB sing N N 361 VAL CA HA sing N N 362 VAL C O doub N N 363 VAL C OXT sing N N 364 VAL CB CG1 sing N N 365 VAL CB CG2 sing N N 366 VAL CB HB sing N N 367 VAL CG1 HG11 sing N N 368 VAL CG1 HG12 sing N N 369 VAL CG1 HG13 sing N N 370 VAL CG2 HG21 sing N N 371 VAL CG2 HG22 sing N N 372 VAL CG2 HG23 sing N N 373 VAL OXT HXT sing N N 374 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2Z5V _pdbx_initial_refinement_model.details 'PDB ENTRY 2Z5V' # _atom_sites.entry_id 2Y92 _atom_sites.fract_transf_matrix[1][1] 0.011345 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011345 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012691 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_