HEADER TRANSPORT PROTEIN 11-MAR-11 2YC2 TITLE INTRAFLAGELLAR TRANSPORT COMPLEX 25-27 FROM CHLAMYDOMONAS COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTRAFLAGELLAR TRANSPORT PROTEIN 25; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 1-135; COMPND 5 SYNONYM: IFT25; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SMALL RAB-RELATED GTPASE; COMPND 9 CHAIN: C, D; COMPND 10 SYNONYM: IFT27; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_COMMON: GREEN ALGAE; SOURCE 4 ORGANISM_TAXID: 3055; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 10 ORGANISM_COMMON: GREEN ALGAE; SOURCE 11 ORGANISM_TAXID: 3055; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRANSPORT PROTEIN, CILIUM, IFT COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.BHOGARAJU,M.TASCHNER,E.LORENTZEN REVDAT 4 20-DEC-23 2YC2 1 REMARK LINK REVDAT 3 01-JUN-11 2YC2 1 JRNL REVDAT 2 11-MAY-11 2YC2 1 JRNL REVDAT 1 23-MAR-11 2YC2 0 JRNL AUTH S.BHOGARAJU,M.TASCHNER,M.MORAWETZ,C.BASQUIN,E.LORENTZEN JRNL TITL CRYSTAL STRUCTURE OF THE INTRAFLAGELLAR TRANSPORT COMPLEX JRNL TITL 2 25/27. JRNL REF EMBO J. V. 30 1907 2011 JRNL REFN ISSN 0261-4189 JRNL PMID 21505417 JRNL DOI 10.1038/EMBOJ.2011.110 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 16991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 849 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1183 - 4.7020 0.99 2805 147 0.2063 0.2445 REMARK 3 2 4.7020 - 3.7325 1.00 2767 146 0.1646 0.2147 REMARK 3 3 3.7325 - 3.2608 0.99 2762 145 0.1883 0.2833 REMARK 3 4 3.2608 - 2.9627 1.00 2737 144 0.2184 0.2736 REMARK 3 5 2.9627 - 2.7504 1.00 2719 143 0.2476 0.3521 REMARK 3 6 2.7504 - 2.5883 0.85 2352 124 0.2845 0.3511 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 43.31 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.80800 REMARK 3 B22 (A**2) : -5.14720 REMARK 3 B33 (A**2) : -2.66080 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.45690 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4381 REMARK 3 ANGLE : 1.335 5959 REMARK 3 CHIRALITY : 0.087 705 REMARK 3 PLANARITY : 0.005 764 REMARK 3 DIHEDRAL : 16.688 1521 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YC2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1290047617. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.973 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16992 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.590 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.56000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 1TVG, 2O52, 1Y2K, 2AED, 1N6H REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 50MM MES PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.11000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 GLY A 95 REMARK 465 ASP A 96 REMARK 465 ASP A 135 REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 GLY B 95 REMARK 465 ASP B 96 REMARK 465 ASP B 135 REMARK 465 GLY C -3 REMARK 465 ALA C -2 REMARK 465 ALA C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 LYS C 3 REMARK 465 LYS C 4 REMARK 465 GLU C 5 REMARK 465 VAL C 6 REMARK 465 GLY C 23 REMARK 465 GLU C 24 REMARK 465 ALA C 25 REMARK 465 THR C 26 REMARK 465 VAL C 27 REMARK 465 GLY C 28 REMARK 465 LYS C 29 REMARK 465 SER C 30 REMARK 465 ALA C 31 REMARK 465 LEU C 32 REMARK 465 ILE C 33 REMARK 465 SER C 34 REMARK 465 MET C 35 REMARK 465 PHE C 36 REMARK 465 THR C 37 REMARK 465 SER C 38 REMARK 465 LYS C 39 REMARK 465 GLY C 40 REMARK 465 SER C 41 REMARK 465 LYS C 42 REMARK 465 PHE C 43 REMARK 465 LEU C 44 REMARK 465 LYS C 45 REMARK 465 ASP C 46 REMARK 465 TYR C 47 REMARK 465 ALA C 48 REMARK 465 MET C 49 REMARK 465 THR C 50 REMARK 465 SER C 51 REMARK 465 GLY C 52 REMARK 465 VAL C 53 REMARK 465 GLU C 54 REMARK 465 VAL C 55 REMARK 465 VAL C 56 REMARK 465 ASP C 139 REMARK 465 LEU C 140 REMARK 465 PRO C 141 REMARK 465 PRO C 142 REMARK 465 GLN C 143 REMARK 465 ARG C 144 REMARK 465 HIS C 145 REMARK 465 ALA C 168 REMARK 465 ASN C 169 REMARK 465 PRO C 170 REMARK 465 PRO C 171 REMARK 465 GLY C 172 REMARK 465 LYS C 173 REMARK 465 ASP C 174 REMARK 465 TYR C 204 REMARK 465 GLY D -3 REMARK 465 ALA D -2 REMARK 465 ALA D -1 REMARK 465 SER D 0 REMARK 465 MET D 1 REMARK 465 VAL D 2 REMARK 465 LYS D 3 REMARK 465 LYS D 4 REMARK 465 GLU D 5 REMARK 465 VAL D 6 REMARK 465 LYS D 7 REMARK 465 GLY D 23 REMARK 465 GLU D 24 REMARK 465 ALA D 25 REMARK 465 THR D 26 REMARK 465 VAL D 27 REMARK 465 GLY D 28 REMARK 465 LYS D 29 REMARK 465 SER D 30 REMARK 465 ALA D 31 REMARK 465 LEU D 32 REMARK 465 ILE D 33 REMARK 465 SER D 34 REMARK 465 MET D 35 REMARK 465 PHE D 36 REMARK 465 THR D 37 REMARK 465 SER D 38 REMARK 465 LYS D 39 REMARK 465 GLY D 40 REMARK 465 SER D 41 REMARK 465 LYS D 42 REMARK 465 PHE D 43 REMARK 465 LEU D 44 REMARK 465 LYS D 45 REMARK 465 ASP D 46 REMARK 465 TYR D 47 REMARK 465 ALA D 48 REMARK 465 MET D 49 REMARK 465 THR D 50 REMARK 465 SER D 51 REMARK 465 GLY D 52 REMARK 465 VAL D 53 REMARK 465 GLU D 54 REMARK 465 VAL D 55 REMARK 465 VAL D 56 REMARK 465 ASP D 139 REMARK 465 LEU D 140 REMARK 465 PRO D 141 REMARK 465 PRO D 142 REMARK 465 GLN D 143 REMARK 465 ARG D 144 REMARK 465 HIS D 145 REMARK 465 ASN D 169 REMARK 465 PRO D 170 REMARK 465 PRO D 171 REMARK 465 GLY D 172 REMARK 465 LYS D 173 REMARK 465 ASP D 174 REMARK 465 ASN D 203 REMARK 465 TYR D 204 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 32 CG CD CE NZ REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 ARG A 56 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 79 CG CD CE NZ REMARK 470 GLN A 82 CG CD OE1 NE2 REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 ARG A 94 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 97 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 108 CG CD NE CZ NH1 NH2 REMARK 470 MET B 1 CG SD CE REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 MET B 15 CG SD CE REMARK 470 GLU B 52 CG CD OE1 OE2 REMARK 470 ARG B 56 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 79 CG CD CE NZ REMARK 470 GLN B 82 CG CD OE1 NE2 REMARK 470 ARG B 94 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 97 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 98 CG CD1 CD2 REMARK 470 ARG B 108 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 7 CG CD CE NZ REMARK 470 ILE C 9 CG1 CG2 CD1 REMARK 470 LYS C 83 CG CD CE NZ REMARK 470 ASN C 91 CG OD1 ND2 REMARK 470 ARG C 125 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 126 CG CD OE1 OE2 REMARK 470 ARG C 130 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 137 CG CD CE NZ REMARK 470 THR C 138 OG1 CG2 REMARK 470 ARG C 188 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 202 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 203 CG OD1 ND2 REMARK 470 PRO D 8 CG CD REMARK 470 ILE D 9 CG1 CG2 CD1 REMARK 470 ARG D 125 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 126 CG CD OE1 OE2 REMARK 470 ARG D 130 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 137 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG B 6 O LEU B 29 2.07 REMARK 500 O ARG A 6 O LEU A 29 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 7 -52.96 119.58 REMARK 500 MET A 15 47.79 -146.82 REMARK 500 MET A 42 153.33 69.07 REMARK 500 VAL A 86 -59.93 -125.70 REMARK 500 ALA A 92 151.78 -47.22 REMARK 500 GLU B 7 -51.30 116.69 REMARK 500 MET B 15 45.14 -146.72 REMARK 500 MET B 42 153.49 69.75 REMARK 500 VAL B 86 -58.19 -125.77 REMARK 500 ALA B 92 150.13 -46.17 REMARK 500 ASP C 64 62.70 -102.75 REMARK 500 TYR C 89 -2.13 81.33 REMARK 500 ASP D 64 62.89 -103.10 REMARK 500 TYR D 89 -2.27 79.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 27 O REMARK 620 2 ASP A 30 OD1 70.6 REMARK 620 3 LYS A 32 O 136.2 69.1 REMARK 620 4 THR A 35 O 106.2 136.5 91.7 REMARK 620 5 THR A 35 OG1 85.2 65.6 63.0 70.9 REMARK 620 6 ASN A 127 O 100.1 143.6 122.6 79.9 150.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 27 O REMARK 620 2 ASP B 30 OD1 69.7 REMARK 620 3 LYS B 32 O 136.5 66.9 REMARK 620 4 THR B 35 O 110.9 140.9 99.9 REMARK 620 5 THR B 35 OG1 88.4 67.0 71.1 73.9 REMARK 620 6 ASN B 127 O 101.3 138.6 113.8 80.6 154.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YC4 RELATED DB: PDB REMARK 900 INTRAFLAGELLAR TRANSPORT COMPLEX 25-27 FROM CHLAMYDOMONAS DBREF 2YC2 A 1 135 UNP B8LIX8 B8LIX8_CHLRE 1 135 DBREF 2YC2 B 1 135 UNP B8LIX8 B8LIX8_CHLRE 1 135 DBREF 2YC2 C 1 204 UNP A8HN58 A8HN58_CHLRE 1 204 DBREF 2YC2 D 1 204 UNP A8HN58 A8HN58_CHLRE 1 204 SEQADV 2YC2 GLY A -3 UNP B8LIX8 EXPRESSION TAG SEQADV 2YC2 ALA A -2 UNP B8LIX8 EXPRESSION TAG SEQADV 2YC2 ALA A -1 UNP B8LIX8 EXPRESSION TAG SEQADV 2YC2 SER A 0 UNP B8LIX8 EXPRESSION TAG SEQADV 2YC2 GLY B -3 UNP B8LIX8 EXPRESSION TAG SEQADV 2YC2 ALA B -2 UNP B8LIX8 EXPRESSION TAG SEQADV 2YC2 ALA B -1 UNP B8LIX8 EXPRESSION TAG SEQADV 2YC2 SER B 0 UNP B8LIX8 EXPRESSION TAG SEQADV 2YC2 GLY C -3 UNP A8HN58 EXPRESSION TAG SEQADV 2YC2 ALA C -2 UNP A8HN58 EXPRESSION TAG SEQADV 2YC2 ALA C -1 UNP A8HN58 EXPRESSION TAG SEQADV 2YC2 SER C 0 UNP A8HN58 EXPRESSION TAG SEQADV 2YC2 GLY D -3 UNP A8HN58 EXPRESSION TAG SEQADV 2YC2 ALA D -2 UNP A8HN58 EXPRESSION TAG SEQADV 2YC2 ALA D -1 UNP A8HN58 EXPRESSION TAG SEQADV 2YC2 SER D 0 UNP A8HN58 EXPRESSION TAG SEQRES 1 A 139 GLY ALA ALA SER MET LYS ASP TYR ALA ARG GLU GLU ASN SEQRES 2 A 139 GLY GLY LEU VAL VAL MET ALA SER CYS SER ASP GLU ARG SEQRES 3 A 139 PHE PRO PRO GLU ASN MET LEU ASP GLY LYS ASP ASN THR SEQRES 4 A 139 PHE TRP VAL THR THR GLY MET PHE PRO GLN GLU PHE VAL SEQRES 5 A 139 LEU ARG LEU GLU SER CYS ILE ARG VAL SER LYS ILE THR SEQRES 6 A 139 THR LEU SER LEU ASN VAL ARG LYS LEU ALA VAL GLU LYS SEQRES 7 A 139 CYS ASP GLN ASP LYS PRO ASP GLN PHE GLU LYS VAL PHE SEQRES 8 A 139 GLU VAL GLU LEU ALA ASN ARG GLY ASP ARG LEU GLN THR SEQRES 9 A 139 GLU VAL HIS GLN VAL ASN ILE ARG ALA LYS TYR LEU LYS SEQRES 10 A 139 PHE ILE LEU LEU GLN GLY HIS GLY GLU PHE ALA THR VAL SEQRES 11 A 139 ASN ARG VAL SER VAL VAL GLY GLY ASP SEQRES 1 B 139 GLY ALA ALA SER MET LYS ASP TYR ALA ARG GLU GLU ASN SEQRES 2 B 139 GLY GLY LEU VAL VAL MET ALA SER CYS SER ASP GLU ARG SEQRES 3 B 139 PHE PRO PRO GLU ASN MET LEU ASP GLY LYS ASP ASN THR SEQRES 4 B 139 PHE TRP VAL THR THR GLY MET PHE PRO GLN GLU PHE VAL SEQRES 5 B 139 LEU ARG LEU GLU SER CYS ILE ARG VAL SER LYS ILE THR SEQRES 6 B 139 THR LEU SER LEU ASN VAL ARG LYS LEU ALA VAL GLU LYS SEQRES 7 B 139 CYS ASP GLN ASP LYS PRO ASP GLN PHE GLU LYS VAL PHE SEQRES 8 B 139 GLU VAL GLU LEU ALA ASN ARG GLY ASP ARG LEU GLN THR SEQRES 9 B 139 GLU VAL HIS GLN VAL ASN ILE ARG ALA LYS TYR LEU LYS SEQRES 10 B 139 PHE ILE LEU LEU GLN GLY HIS GLY GLU PHE ALA THR VAL SEQRES 11 B 139 ASN ARG VAL SER VAL VAL GLY GLY ASP SEQRES 1 C 208 GLY ALA ALA SER MET VAL LYS LYS GLU VAL LYS PRO ILE SEQRES 2 C 208 ASP ILE THR ALA THR LEU ARG CYS LYS VAL ALA VAL VAL SEQRES 3 C 208 GLY GLU ALA THR VAL GLY LYS SER ALA LEU ILE SER MET SEQRES 4 C 208 PHE THR SER LYS GLY SER LYS PHE LEU LYS ASP TYR ALA SEQRES 5 C 208 MET THR SER GLY VAL GLU VAL VAL VAL ALA PRO VAL THR SEQRES 6 C 208 ILE PRO ASP THR THR VAL SER VAL GLU LEU PHE LEU LEU SEQRES 7 C 208 ASP THR ALA GLY SER ASP LEU TYR LYS GLU GLN ILE SER SEQRES 8 C 208 GLN TYR TRP ASN GLY VAL TYR TYR ALA ILE LEU VAL PHE SEQRES 9 C 208 ASP VAL SER SER MET GLU SER PHE GLU SER CYS LYS ALA SEQRES 10 C 208 TRP PHE GLU LEU LEU LYS SER ALA ARG PRO ASP ARG GLU SEQRES 11 C 208 ARG PRO LEU ARG ALA VAL LEU VAL ALA ASN LYS THR ASP SEQRES 12 C 208 LEU PRO PRO GLN ARG HIS GLN VAL ARG LEU ASP MET ALA SEQRES 13 C 208 GLN ASP TRP ALA THR THR ASN THR LEU ASP PHE PHE ASP SEQRES 14 C 208 VAL SER ALA ASN PRO PRO GLY LYS ASP ALA ASP ALA PRO SEQRES 15 C 208 PHE LEU SER ILE ALA THR THR PHE TYR ARG ASN TYR GLU SEQRES 16 C 208 ASP LYS VAL ALA ALA PHE GLN ASP ALA CYS ARG ASN TYR SEQRES 1 D 208 GLY ALA ALA SER MET VAL LYS LYS GLU VAL LYS PRO ILE SEQRES 2 D 208 ASP ILE THR ALA THR LEU ARG CYS LYS VAL ALA VAL VAL SEQRES 3 D 208 GLY GLU ALA THR VAL GLY LYS SER ALA LEU ILE SER MET SEQRES 4 D 208 PHE THR SER LYS GLY SER LYS PHE LEU LYS ASP TYR ALA SEQRES 5 D 208 MET THR SER GLY VAL GLU VAL VAL VAL ALA PRO VAL THR SEQRES 6 D 208 ILE PRO ASP THR THR VAL SER VAL GLU LEU PHE LEU LEU SEQRES 7 D 208 ASP THR ALA GLY SER ASP LEU TYR LYS GLU GLN ILE SER SEQRES 8 D 208 GLN TYR TRP ASN GLY VAL TYR TYR ALA ILE LEU VAL PHE SEQRES 9 D 208 ASP VAL SER SER MET GLU SER PHE GLU SER CYS LYS ALA SEQRES 10 D 208 TRP PHE GLU LEU LEU LYS SER ALA ARG PRO ASP ARG GLU SEQRES 11 D 208 ARG PRO LEU ARG ALA VAL LEU VAL ALA ASN LYS THR ASP SEQRES 12 D 208 LEU PRO PRO GLN ARG HIS GLN VAL ARG LEU ASP MET ALA SEQRES 13 D 208 GLN ASP TRP ALA THR THR ASN THR LEU ASP PHE PHE ASP SEQRES 14 D 208 VAL SER ALA ASN PRO PRO GLY LYS ASP ALA ASP ALA PRO SEQRES 15 D 208 PHE LEU SER ILE ALA THR THR PHE TYR ARG ASN TYR GLU SEQRES 16 D 208 ASP LYS VAL ALA ALA PHE GLN ASP ALA CYS ARG ASN TYR HET CA A 201 1 HET CA B 201 1 HETNAM CA CALCIUM ION FORMUL 5 CA 2(CA 2+) FORMUL 7 HOH *33(H2 O) HELIX 1 1 PRO A 24 ASP A 30 5 7 HELIX 2 2 PRO B 24 ASP B 30 5 7 HELIX 3 3 LYS C 7 ILE C 11 5 5 HELIX 4 4 SER C 79 SER C 87 1 9 HELIX 5 5 SER C 104 ARG C 122 1 19 HELIX 6 6 ARG C 148 ASN C 159 1 12 HELIX 7 7 ASP C 176 CYS C 201 1 26 HELIX 8 8 SER D 79 SER D 87 1 9 HELIX 9 9 SER D 104 ARG D 122 1 19 HELIX 10 10 ARG D 148 THR D 160 1 13 HELIX 11 11 ASP D 176 CYS D 201 1 26 SHEET 1 AA 2 LYS A 2 ASP A 3 0 SHEET 2 AA 2 THR A 125 GLY A 134 -1 O GLY A 133 N LYS A 2 SHEET 1 AB 2 LEU A 12 VAL A 13 0 SHEET 2 AB 2 GLN A 45 LEU A 65 -1 O ARG A 50 N LEU A 12 SHEET 1 AC 2 TRP A 37 VAL A 38 0 SHEET 2 AC 2 THR A 125 GLY A 134 1 O VAL A 126 N TRP A 37 SHEET 1 AD 6 GLU A 84 GLU A 90 0 SHEET 2 AD 6 VAL A 67 CYS A 75 -1 O LEU A 70 N VAL A 89 SHEET 3 AD 6 GLN A 99 GLY A 119 -1 N LYS A 110 O CYS A 75 SHEET 4 AD 6 GLN A 45 LEU A 65 -1 O GLN A 45 N LEU A 116 SHEET 5 AD 6 THR A 125 GLY A 134 -1 O THR A 125 N LEU A 65 SHEET 6 AD 6 TRP A 37 VAL A 38 1 O TRP A 37 N VAL A 126 SHEET 1 AE 5 GLU A 84 GLU A 90 0 SHEET 2 AE 5 VAL A 67 CYS A 75 -1 O LEU A 70 N VAL A 89 SHEET 3 AE 5 GLN A 99 GLY A 119 -1 N LYS A 110 O CYS A 75 SHEET 4 AE 5 GLN A 45 LEU A 65 -1 O GLN A 45 N LEU A 116 SHEET 5 AE 5 LEU A 12 VAL A 13 -1 O LEU A 12 N ARG A 50 SHEET 1 BA 2 LYS B 2 ASP B 3 0 SHEET 2 BA 2 THR B 125 GLY B 134 -1 O GLY B 133 N LYS B 2 SHEET 1 BB 2 LEU B 12 VAL B 13 0 SHEET 2 BB 2 GLN B 45 LEU B 65 -1 O ARG B 50 N LEU B 12 SHEET 1 BC 2 TRP B 37 VAL B 38 0 SHEET 2 BC 2 THR B 125 GLY B 134 1 O VAL B 126 N TRP B 37 SHEET 1 BD 6 GLU B 84 GLU B 90 0 SHEET 2 BD 6 VAL B 67 CYS B 75 -1 O LEU B 70 N VAL B 89 SHEET 3 BD 6 GLN B 99 GLY B 119 -1 N LYS B 110 O CYS B 75 SHEET 4 BD 6 GLN B 45 LEU B 65 -1 O GLN B 45 N LEU B 116 SHEET 5 BD 6 THR B 125 GLY B 134 -1 O THR B 125 N LEU B 65 SHEET 6 BD 6 TRP B 37 VAL B 38 1 O TRP B 37 N VAL B 126 SHEET 1 BE 5 GLU B 84 GLU B 90 0 SHEET 2 BE 5 VAL B 67 CYS B 75 -1 O LEU B 70 N VAL B 89 SHEET 3 BE 5 GLN B 99 GLY B 119 -1 N LYS B 110 O CYS B 75 SHEET 4 BE 5 GLN B 45 LEU B 65 -1 O GLN B 45 N LEU B 116 SHEET 5 BE 5 LEU B 12 VAL B 13 -1 O LEU B 12 N ARG B 50 SHEET 1 CA 6 ALA C 58 THR C 61 0 SHEET 2 CA 6 VAL C 67 ASP C 75 -1 O VAL C 69 N VAL C 60 SHEET 3 CA 6 ALA C 13 VAL C 21 1 O ALA C 13 N SER C 68 SHEET 4 CA 6 TYR C 95 ASP C 101 1 O TYR C 95 N ALA C 20 SHEET 5 CA 6 ARG C 130 ASN C 136 1 O ARG C 130 N ALA C 96 SHEET 6 CA 6 ASP C 162 ASP C 165 1 O ASP C 162 N LEU C 133 SHEET 1 DA 6 ALA D 58 THR D 61 0 SHEET 2 DA 6 VAL D 67 ASP D 75 -1 O VAL D 69 N VAL D 60 SHEET 3 DA 6 ALA D 13 VAL D 21 1 O ALA D 13 N SER D 68 SHEET 4 DA 6 TYR D 95 ASP D 101 1 O TYR D 95 N ALA D 20 SHEET 5 DA 6 ARG D 130 ASN D 136 1 O ARG D 130 N ALA D 96 SHEET 6 DA 6 ASP D 162 ASP D 165 1 O ASP D 162 N LEU D 133 LINK O ASN A 27 CA CA A 201 1555 1555 2.51 LINK OD1 ASP A 30 CA CA A 201 1555 1555 3.01 LINK O LYS A 32 CA CA A 201 1555 1555 2.57 LINK O THR A 35 CA CA A 201 1555 1555 2.71 LINK OG1 THR A 35 CA CA A 201 1555 1555 2.87 LINK O ASN A 127 CA CA A 201 1555 1555 2.47 LINK O ASN B 27 CA CA B 201 1555 1555 2.48 LINK OD1 ASP B 30 CA CA B 201 1555 1555 3.07 LINK O LYS B 32 CA CA B 201 1555 1555 2.39 LINK O THR B 35 CA CA B 201 1555 1555 2.59 LINK OG1 THR B 35 CA CA B 201 1555 1555 2.73 LINK O ASN B 127 CA CA B 201 1555 1555 2.49 CISPEP 1 PHE A 43 PRO A 44 0 -4.89 CISPEP 2 PHE B 43 PRO B 44 0 -4.65 CISPEP 3 PRO C 63 ASP C 64 0 -5.52 CISPEP 4 GLY C 78 SER C 79 0 -2.86 CISPEP 5 ARG C 202 ASN C 203 0 -1.87 CISPEP 6 PRO D 8 ILE D 9 0 26.42 CISPEP 7 PRO D 63 ASP D 64 0 -5.06 CISPEP 8 GLY D 78 SER D 79 0 -3.15 CISPEP 9 SER D 167 ALA D 168 0 0.66 SITE 1 AC1 5 ASN A 27 ASP A 30 LYS A 32 THR A 35 SITE 2 AC1 5 ASN A 127 SITE 1 AC2 5 ASN B 27 ASP B 30 LYS B 32 THR B 35 SITE 2 AC2 5 ASN B 127 CRYST1 44.050 96.220 66.970 90.00 89.97 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022701 0.000000 -0.000012 0.00000 SCALE2 0.000000 0.010393 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014932 0.00000 MTRIX1 1 1.000000 -0.000257 0.000543 -0.00503 1 MTRIX2 1 0.000257 -1.000000 -0.000775 -1.86547 1 MTRIX3 1 0.000543 -0.000775 1.000000 -33.46420 1 MTRIX1 2 0.999999 -0.000361 -0.001447 0.06639 1 MTRIX2 2 -0.000359 -0.999999 0.001262 46.20320 1 MTRIX3 2 -0.001447 -0.001262 -0.999998 33.53950 1