data_2YDR # _entry.id 2YDR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YDR pdb_00002ydr 10.2210/pdb2ydr/pdb PDBE EBI-47797 ? ? WWPDB D_1290047797 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1DT7 unspecified 'SOLUTION STRUCTURE OF THE C-TERMINAL NEGATIVE REGULATORY DOMAIN OF P53 IN A COMPLEX WITH CA2+-BOUND S100B(BB)' PDB 2J1X unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-Y220C-N239Y- N268D' PDB 1PES unspecified 'TUMOR ANTIGEN P53 (TETRAMERIZATION DOMAIN) (P53TET) (NMR , MINIMIZED AVERAGE STRUCTURE)' PDB 1A1U unspecified 'SOLUTION STRUCTURE DETERMINATION OF A P53 MUTANT DIMERIZATION DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE' PDB 2WGX unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-Y236F-N239Y- T253I-N268D' PDB 2BIO unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-R249S- N268D' PDB 2J11 unspecified 'P53 TETRAMERIZATION DOMAIN MUTANT Y327S T329G Q331G' PDB 1PET unspecified 'TUMOR ANTIGEN P53 (TETRAMERIZATION DOMAIN) (P53TET) (NMR , 19 STRUCTURES)' PDB 2X0Y unspecified 'SCREENING-BASED DISCOVERY OF DRUG-LIKE O-GLCNACASE INHIBITOR SCAFFOLDS' PDB 1JSP unspecified 'NMR STRUCTURE OF CBP BROMODOMAIN IN COMPLEX WITH P53 PEPTIDE' PDB 1MA3 unspecified 'STRUCTURE OF A SIR2 ENZYME BOUND TO AN ACETYLATED P53PEPTIDE' PDB 2J62 unspecified 'STRUCTURE OF A BACTERIAL O-GLCNACASE IN COMPLEX WITH GLCNACSTATIN' PDB 2XWR unspecified 'CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF HUMAN P53 WITH EXTENDED N TERMINUS' PDB 2H1L unspecified 'THE STRUCTURE OF THE ONCOPROTEIN SV40 LARGE T ANTIGEN ANDP53 TUMOR SUPPRESSOR COMPLEX' PDB 2X0U unspecified 'STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO A 2-AMINO SUBSTITUTED BENZOTHIAZOLE SCAFFOLD' PDB 1YCQ unspecified 'XENOPUS LAEVIS MDM2 BOUND TO THE TRANSACTIVATION DOMAIN OF HUMAN P53' PDB 1GZH unspecified 'CRYSTAL STRUCTURE OF THE BRCT DOMAINS OF HUMAN 53BP1 BOUND TO THE P53 TUMOR SUPRESSOR' PDB 2BIM unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-N268D- R273H' PDB 2ADY unspecified 'STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS( COMPLEX IV)' PDB 1SAE unspecified 'HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAC STRUCTURES)' PDB 2CBI unspecified 'STRUCTURE OF THE CLOSTRIDIUM PERFRINGENS NAGJ FAMILY 84 GLYCOSIDE HYDROLASE, A HOMOLOGUE OF HUMAN O-GLCNACASE' PDB 2BIQ unspecified 'HUMAN P53 CORE DOMAIN MUTANT T123A-M133L-H168R-V203A- N239Y-R249S-N268D' PDB 2YBG unspecified 'STRUCTURE OF LYS120-ACETYLATED P53 CORE DOMAIN' PDB 1UOL unspecified 'CRYSTAL STRUCTURE OF THE HUMAN P53 CORE DOMAIN MUTANT M133L/V203A/N239Y/N268D AT 1.9 A RESOLUTION.' PDB 2FOJ unspecified 'THE CRYSTAL STRUCURE OF THE N-TERMINAL DOMAIN OF HAUSP/USP7COMPLEXED WITH P53 PEPTIDE 364-367' PDB 2B3G unspecified 'P53N (FRAGMENT 33-60) BOUND TO RPA70N' PDB 2YDQ unspecified 'CPOGA D298N IN COMPLEX WITH HOGA-DERIVED O-GLCNAC PEPTIDE' PDB 2BIN unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-H168R-V203A-N239Y- N268D' PDB 1OLH unspecified 'P53 (OLIGOMERIZATION DOMAIN) (NMR, 35 STRUCTURES)' PDB 1TSR unspecified 'P53 CORE DOMAIN IN COMPLEX WITH DEOXYRIBONUCLEIC ACID' PDB 2J21 unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-N268D- R282W' PDB 2GS0 unspecified 'NMR STRUCTURE OF THE COMPLEX BETWEEN THE PH DOMAIN OF THETFB1 SUBUNIT FROM TFIIH AND THE ACTIVATION DOMAIN OF P53' PDB 2J0Z unspecified 'P53 TETRAMERIZATION DOMAIN WILD TYPE' PDB 1C26 unspecified 'CRYSTAL STRUCTURE OF P53 TETRAMERIZATION DOMAIN' PDB 2X0V unspecified 'STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO 4-(TRIFLUOROMETHYL)BENZENE-1,2-DIAMINE' PDB 1SAL unspecified 'HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAD STRUCTURES)' PDB 1KZY unspecified 'CRYSTAL STRUCTURE OF THE 53BP1 BRCT REGION COMPLEXED TOTUMOR SUPPRESSOR P53' PDB 1XQH unspecified 'CRYSTAL STRUCTURE OF A TERNARY COMPLEX OF THEMETHYLTRANSFERASE SET9 (ALSO KNOWN AS SET7/9) WITH A P53PEPTIDE AND SAH' PDB 2FEJ unspecified 'SOLUTION STRUCTURE OF HUMAN P53 DNA BINDING DOMAIN.' PDB 2AHI unspecified 'STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS( COMPLEX III)' PDB 3SAK unspecified 'HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAC STRUCTURES)' PDB 1SAF unspecified 'HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAD STRUCTURES)' PDB 2FOO unspecified 'THE CRYSTAL STRUCURE OF THE N-TERMINAL DOMAIN OF HAUSP/USP7COMPLEXED WITH P53 PEPTIDE 359-362' PDB 1OLG unspecified 'P53 (OLIGOMERIZATION DOMAIN) (NMR, MINIMIZED AVERAGE STRUCTURE)' PDB 2BIP unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-H168R-V203A-N239Y- R249S-N268D' PDB 2J1Y unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-G245S- N268D' PDB 2X0W unspecified 'STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO 5,6-DIMETHOXY-2-METHYLBENZOTHIAZOLE' PDB 2V5C unspecified 'FAMILY 84 GLYCOSIDE HYDROLASE FROM CLOSTRIDIUM PERFRINGENS , 2.1 ANGSTROM STRUCTURE' PDB 2VUK unspecified 'STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO THE STABILIZING SMALL-MOLECULE DRUG PHIKAN083' PDB 1AIE unspecified 'P53 TETRAMERIZATION DOMAIN CRYSTAL STRUCTURE' PDB 1SAJ unspecified 'HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAD STRUCTURES)' PDB 1TUP unspecified 'TUMOR SUPPRESSOR P53 COMPLEXED WITH DEOXYRIBONUCLEIC ACID' PDB 1HS5 unspecified 'NMR SOLUTION STRUCTURE OF DESIGNED P53 DIMER' PDB 2ATA unspecified 'STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS( COMPLEX II)' PDB 2VUR unspecified 'CHEMICAL DISSECTION OF THE LINK BETWEEN STREPTOZOTOCIN, O-GLCNAC AND PANCREATIC CELL DEATH' PDB 1SAH unspecified 'HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAD STRUCTURES)' PDB 2XPK unspecified 'CELL-PENETRANT, NANOMOLAR O-GLCNACASE INHIBITORS SELECTIVE AGAINST LYSOSOMAL HEXOSAMINIDASES' PDB 1YCR unspecified 'MDM2 BOUND TO THE TRANSACTIVATION DOMAIN OF P53' PDB 2J10 unspecified 'P53 TETRAMERIZATION DOMAIN MUTANT T329F Q331K' PDB 1SAK unspecified 'HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAC STRUCTURES)' PDB 2WB5 unspecified 'GLCNACSTATINS ARE NANOMOLAR INHIBITORS OF HUMAN O- GLCNACASE INDUCING CELLULAR HYPER-O-GLCNACYLATION' PDB 2JH2 unspecified 'X-RAY CRYSTAL STRUCTURE OF A COHESIN-LIKE MODULE FROM CLOSTRIDIUM PERFRINGENS' PDB 2J1Z unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-N268D- F270L' PDB 2AC0 unspecified 'STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS( COMPLEX I)' PDB 2CBJ unspecified ;STRUCTURE OF THE CLOSTRIDIUM PERFRINGENS NAGJ FAMILY 84 GLYCOSIDE HYDROLASE, A HOMOLOGUE OF HUMAN O-GLCNACASE IN COMPLEX WITH PUGNAC ; PDB 1YCS unspecified 'P53-53BP2 COMPLEX' PDB 2J20 unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-N268D- R273C' PDB 1H26 unspecified 'CDK2/CYCLINA IN COMPLEX WITH AN 11-RESIDUE RECRUITMENT PEPTIDE FROM P53' PDB 2J1W unspecified 'HUMAN P53 CORE DOMAIN MUTANT M133L-V143A-V203A-N239Y- N268D' PDB 2V5D unspecified 'STRUCTURE OF A FAMILY 84 GLYCOSIDE HYDROLASE AND A FAMILY 32 CARBOHYDRATE-BINDING MODULE IN TANDEM FROM CLOSTRIDIUM PERFRINGENS.' PDB 2YDS unspecified 'CPOGA D298N IN COMPLEX WITH TAB1-DERIVED O-GLCNAC PEPTIDE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YDR _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-03-24 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schimpl, M.' 1 'Borodkin, V.S.' 2 'Gray, L.J.' 3 'van Aalten, D.M.F.' 4 # _citation.id primary _citation.title 'Synergy of Peptide and Sugar in O-Glcnacase Substrate Recognition.' _citation.journal_abbrev Chem.Biol. _citation.journal_volume 19 _citation.page_first 173 _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM CBOLE2 _citation.country UK _citation.journal_id_ISSN 1074-5521 _citation.journal_id_CSD 2050 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22365600 _citation.pdbx_database_id_DOI 10.1016/J.CHEMBIOL.2012.01.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schimpl, M.' 1 ? primary 'Borodkin, V.S.' 2 ? primary 'Gray, L.J.' 3 ? primary 'Van Aalten, D.M.F.' 4 ? # _cell.entry_id 2YDR _cell.length_a 117.950 _cell.length_b 117.950 _cell.length_c 148.121 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YDR _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'O-GLCNACASE NAGJ' 66130.008 1 3.2.1.52 YES 'RESIDUES 31-618' ? 2 polymer syn 'CELLULAR TUMOR ANTIGEN P53' 1196.308 1 ? ? 'RESIDUES 144-154' 'O-GLCNAC GLYCOSYLATION ON S149' 3 non-polymer syn 'CADMIUM ION' 112.411 18 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 water nat water 18.015 103 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'BETA-N-ACETYLHEXOSAMINIDASE, BETA-HEXOSAMINIDASE, GH84, HEXOSAMINIDASE B, N-ACETYL-BETA-GLUCOSAMINIDASE, O-GLCNACASE, CPNAGJ' 2 'ANTIGEN NY-CO-13, PHOSPHOPROTEIN P53, TUMOR SUPPRESSOR P53' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSVGPKTGEENQVLVPNLNPTPENLEVVGDGFKITSSINLVGEEEADENAVNALREFLTANNIEINSENDPNSTTLIIGE VDDDIPELDEALNGTTAENLKEEGYALVSNDGKIAIEGKDGDGTFYGVQTFKQLVKESNIPEVNITDYPTVSARGIVEGF YGTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAENKVDFVFGISPGIDIRFDGD AGEEDFNHLITKAESLYDMGVRSFAIYWDNIQDKSAAKHAQVLNRFNEEFVKAKGDVKPLITVPTEYDTGAMVSNGQPRA YTRIFAETVDPSIEVMWTGPGVVTNEIPLSDAQLISGIYDRNMAVWWNYPVTDYFKGKLALGPMHGLDKGLNQYVDFFTV NPMEHAELSKISIHTAADYSWNMDNYDYDKAWNRAIDMLYGDLAEDMKVFANHSTRMDNKTWAKSGREDAPELRAKMDEL WNKLSSKEDASALIEELYGEFARMEEACNNLKANLPEVALEECSRQLDELITLAQGDKASLDMIVAQLNEDTEAYESAKE IAQNKLNTALSSFAVISEKVAQSFIQEALS ; ;GSVGPKTGEENQVLVPNLNPTPENLEVVGDGFKITSSINLVGEEEADENAVNALREFLTANNIEINSENDPNSTTLIIGE VDDDIPELDEALNGTTAENLKEEGYALVSNDGKIAIEGKDGDGTFYGVQTFKQLVKESNIPEVNITDYPTVSARGIVEGF YGTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAENKVDFVFGISPGIDIRFDGD AGEEDFNHLITKAESLYDMGVRSFAIYWDNIQDKSAAKHAQVLNRFNEEFVKAKGDVKPLITVPTEYDTGAMVSNGQPRA YTRIFAETVDPSIEVMWTGPGVVTNEIPLSDAQLISGIYDRNMAVWWNYPVTDYFKGKLALGPMHGLDKGLNQYVDFFTV NPMEHAELSKISIHTAADYSWNMDNYDYDKAWNRAIDMLYGDLAEDMKVFANHSTRMDNKTWAKSGREDAPELRAKMDEL WNKLSSKEDASALIEELYGEFARMEEACNNLKANLPEVALEECSRQLDELITLAQGDKASLDMIVAQLNEDTEAYESAKE IAQNKLNTALSSFAVISEKVAQSFIQEALS ; A ? 2 'polypeptide(L)' no no QLWVDSTPPPG QLWVDSTPPPG P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 VAL n 1 4 GLY n 1 5 PRO n 1 6 LYS n 1 7 THR n 1 8 GLY n 1 9 GLU n 1 10 GLU n 1 11 ASN n 1 12 GLN n 1 13 VAL n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ASN n 1 18 LEU n 1 19 ASN n 1 20 PRO n 1 21 THR n 1 22 PRO n 1 23 GLU n 1 24 ASN n 1 25 LEU n 1 26 GLU n 1 27 VAL n 1 28 VAL n 1 29 GLY n 1 30 ASP n 1 31 GLY n 1 32 PHE n 1 33 LYS n 1 34 ILE n 1 35 THR n 1 36 SER n 1 37 SER n 1 38 ILE n 1 39 ASN n 1 40 LEU n 1 41 VAL n 1 42 GLY n 1 43 GLU n 1 44 GLU n 1 45 GLU n 1 46 ALA n 1 47 ASP n 1 48 GLU n 1 49 ASN n 1 50 ALA n 1 51 VAL n 1 52 ASN n 1 53 ALA n 1 54 LEU n 1 55 ARG n 1 56 GLU n 1 57 PHE n 1 58 LEU n 1 59 THR n 1 60 ALA n 1 61 ASN n 1 62 ASN n 1 63 ILE n 1 64 GLU n 1 65 ILE n 1 66 ASN n 1 67 SER n 1 68 GLU n 1 69 ASN n 1 70 ASP n 1 71 PRO n 1 72 ASN n 1 73 SER n 1 74 THR n 1 75 THR n 1 76 LEU n 1 77 ILE n 1 78 ILE n 1 79 GLY n 1 80 GLU n 1 81 VAL n 1 82 ASP n 1 83 ASP n 1 84 ASP n 1 85 ILE n 1 86 PRO n 1 87 GLU n 1 88 LEU n 1 89 ASP n 1 90 GLU n 1 91 ALA n 1 92 LEU n 1 93 ASN n 1 94 GLY n 1 95 THR n 1 96 THR n 1 97 ALA n 1 98 GLU n 1 99 ASN n 1 100 LEU n 1 101 LYS n 1 102 GLU n 1 103 GLU n 1 104 GLY n 1 105 TYR n 1 106 ALA n 1 107 LEU n 1 108 VAL n 1 109 SER n 1 110 ASN n 1 111 ASP n 1 112 GLY n 1 113 LYS n 1 114 ILE n 1 115 ALA n 1 116 ILE n 1 117 GLU n 1 118 GLY n 1 119 LYS n 1 120 ASP n 1 121 GLY n 1 122 ASP n 1 123 GLY n 1 124 THR n 1 125 PHE n 1 126 TYR n 1 127 GLY n 1 128 VAL n 1 129 GLN n 1 130 THR n 1 131 PHE n 1 132 LYS n 1 133 GLN n 1 134 LEU n 1 135 VAL n 1 136 LYS n 1 137 GLU n 1 138 SER n 1 139 ASN n 1 140 ILE n 1 141 PRO n 1 142 GLU n 1 143 VAL n 1 144 ASN n 1 145 ILE n 1 146 THR n 1 147 ASP n 1 148 TYR n 1 149 PRO n 1 150 THR n 1 151 VAL n 1 152 SER n 1 153 ALA n 1 154 ARG n 1 155 GLY n 1 156 ILE n 1 157 VAL n 1 158 GLU n 1 159 GLY n 1 160 PHE n 1 161 TYR n 1 162 GLY n 1 163 THR n 1 164 PRO n 1 165 TRP n 1 166 THR n 1 167 HIS n 1 168 GLN n 1 169 ASP n 1 170 ARG n 1 171 LEU n 1 172 ASP n 1 173 GLN n 1 174 ILE n 1 175 LYS n 1 176 PHE n 1 177 TYR n 1 178 GLY n 1 179 GLU n 1 180 ASN n 1 181 LYS n 1 182 LEU n 1 183 ASN n 1 184 THR n 1 185 TYR n 1 186 ILE n 1 187 TYR n 1 188 ALA n 1 189 PRO n 1 190 LYS n 1 191 ASP n 1 192 ASP n 1 193 PRO n 1 194 TYR n 1 195 HIS n 1 196 ARG n 1 197 GLU n 1 198 LYS n 1 199 TRP n 1 200 ARG n 1 201 GLU n 1 202 PRO n 1 203 TYR n 1 204 PRO n 1 205 GLU n 1 206 SER n 1 207 GLU n 1 208 MET n 1 209 GLN n 1 210 ARG n 1 211 MET n 1 212 GLN n 1 213 GLU n 1 214 LEU n 1 215 ILE n 1 216 ASN n 1 217 ALA n 1 218 SER n 1 219 ALA n 1 220 GLU n 1 221 ASN n 1 222 LYS n 1 223 VAL n 1 224 ASP n 1 225 PHE n 1 226 VAL n 1 227 PHE n 1 228 GLY n 1 229 ILE n 1 230 SER n 1 231 PRO n 1 232 GLY n 1 233 ILE n 1 234 ASP n 1 235 ILE n 1 236 ARG n 1 237 PHE n 1 238 ASP n 1 239 GLY n 1 240 ASP n 1 241 ALA n 1 242 GLY n 1 243 GLU n 1 244 GLU n 1 245 ASP n 1 246 PHE n 1 247 ASN n 1 248 HIS n 1 249 LEU n 1 250 ILE n 1 251 THR n 1 252 LYS n 1 253 ALA n 1 254 GLU n 1 255 SER n 1 256 LEU n 1 257 TYR n 1 258 ASP n 1 259 MET n 1 260 GLY n 1 261 VAL n 1 262 ARG n 1 263 SER n 1 264 PHE n 1 265 ALA n 1 266 ILE n 1 267 TYR n 1 268 TRP n 1 269 ASP n 1 270 ASN n 1 271 ILE n 1 272 GLN n 1 273 ASP n 1 274 LYS n 1 275 SER n 1 276 ALA n 1 277 ALA n 1 278 LYS n 1 279 HIS n 1 280 ALA n 1 281 GLN n 1 282 VAL n 1 283 LEU n 1 284 ASN n 1 285 ARG n 1 286 PHE n 1 287 ASN n 1 288 GLU n 1 289 GLU n 1 290 PHE n 1 291 VAL n 1 292 LYS n 1 293 ALA n 1 294 LYS n 1 295 GLY n 1 296 ASP n 1 297 VAL n 1 298 LYS n 1 299 PRO n 1 300 LEU n 1 301 ILE n 1 302 THR n 1 303 VAL n 1 304 PRO n 1 305 THR n 1 306 GLU n 1 307 TYR n 1 308 ASP n 1 309 THR n 1 310 GLY n 1 311 ALA n 1 312 MET n 1 313 VAL n 1 314 SER n 1 315 ASN n 1 316 GLY n 1 317 GLN n 1 318 PRO n 1 319 ARG n 1 320 ALA n 1 321 TYR n 1 322 THR n 1 323 ARG n 1 324 ILE n 1 325 PHE n 1 326 ALA n 1 327 GLU n 1 328 THR n 1 329 VAL n 1 330 ASP n 1 331 PRO n 1 332 SER n 1 333 ILE n 1 334 GLU n 1 335 VAL n 1 336 MET n 1 337 TRP n 1 338 THR n 1 339 GLY n 1 340 PRO n 1 341 GLY n 1 342 VAL n 1 343 VAL n 1 344 THR n 1 345 ASN n 1 346 GLU n 1 347 ILE n 1 348 PRO n 1 349 LEU n 1 350 SER n 1 351 ASP n 1 352 ALA n 1 353 GLN n 1 354 LEU n 1 355 ILE n 1 356 SER n 1 357 GLY n 1 358 ILE n 1 359 TYR n 1 360 ASP n 1 361 ARG n 1 362 ASN n 1 363 MET n 1 364 ALA n 1 365 VAL n 1 366 TRP n 1 367 TRP n 1 368 ASN n 1 369 TYR n 1 370 PRO n 1 371 VAL n 1 372 THR n 1 373 ASP n 1 374 TYR n 1 375 PHE n 1 376 LYS n 1 377 GLY n 1 378 LYS n 1 379 LEU n 1 380 ALA n 1 381 LEU n 1 382 GLY n 1 383 PRO n 1 384 MET n 1 385 HIS n 1 386 GLY n 1 387 LEU n 1 388 ASP n 1 389 LYS n 1 390 GLY n 1 391 LEU n 1 392 ASN n 1 393 GLN n 1 394 TYR n 1 395 VAL n 1 396 ASP n 1 397 PHE n 1 398 PHE n 1 399 THR n 1 400 VAL n 1 401 ASN n 1 402 PRO n 1 403 MET n 1 404 GLU n 1 405 HIS n 1 406 ALA n 1 407 GLU n 1 408 LEU n 1 409 SER n 1 410 LYS n 1 411 ILE n 1 412 SER n 1 413 ILE n 1 414 HIS n 1 415 THR n 1 416 ALA n 1 417 ALA n 1 418 ASP n 1 419 TYR n 1 420 SER n 1 421 TRP n 1 422 ASN n 1 423 MET n 1 424 ASP n 1 425 ASN n 1 426 TYR n 1 427 ASP n 1 428 TYR n 1 429 ASP n 1 430 LYS n 1 431 ALA n 1 432 TRP n 1 433 ASN n 1 434 ARG n 1 435 ALA n 1 436 ILE n 1 437 ASP n 1 438 MET n 1 439 LEU n 1 440 TYR n 1 441 GLY n 1 442 ASP n 1 443 LEU n 1 444 ALA n 1 445 GLU n 1 446 ASP n 1 447 MET n 1 448 LYS n 1 449 VAL n 1 450 PHE n 1 451 ALA n 1 452 ASN n 1 453 HIS n 1 454 SER n 1 455 THR n 1 456 ARG n 1 457 MET n 1 458 ASP n 1 459 ASN n 1 460 LYS n 1 461 THR n 1 462 TRP n 1 463 ALA n 1 464 LYS n 1 465 SER n 1 466 GLY n 1 467 ARG n 1 468 GLU n 1 469 ASP n 1 470 ALA n 1 471 PRO n 1 472 GLU n 1 473 LEU n 1 474 ARG n 1 475 ALA n 1 476 LYS n 1 477 MET n 1 478 ASP n 1 479 GLU n 1 480 LEU n 1 481 TRP n 1 482 ASN n 1 483 LYS n 1 484 LEU n 1 485 SER n 1 486 SER n 1 487 LYS n 1 488 GLU n 1 489 ASP n 1 490 ALA n 1 491 SER n 1 492 ALA n 1 493 LEU n 1 494 ILE n 1 495 GLU n 1 496 GLU n 1 497 LEU n 1 498 TYR n 1 499 GLY n 1 500 GLU n 1 501 PHE n 1 502 ALA n 1 503 ARG n 1 504 MET n 1 505 GLU n 1 506 GLU n 1 507 ALA n 1 508 CYS n 1 509 ASN n 1 510 ASN n 1 511 LEU n 1 512 LYS n 1 513 ALA n 1 514 ASN n 1 515 LEU n 1 516 PRO n 1 517 GLU n 1 518 VAL n 1 519 ALA n 1 520 LEU n 1 521 GLU n 1 522 GLU n 1 523 CYS n 1 524 SER n 1 525 ARG n 1 526 GLN n 1 527 LEU n 1 528 ASP n 1 529 GLU n 1 530 LEU n 1 531 ILE n 1 532 THR n 1 533 LEU n 1 534 ALA n 1 535 GLN n 1 536 GLY n 1 537 ASP n 1 538 LYS n 1 539 ALA n 1 540 SER n 1 541 LEU n 1 542 ASP n 1 543 MET n 1 544 ILE n 1 545 VAL n 1 546 ALA n 1 547 GLN n 1 548 LEU n 1 549 ASN n 1 550 GLU n 1 551 ASP n 1 552 THR n 1 553 GLU n 1 554 ALA n 1 555 TYR n 1 556 GLU n 1 557 SER n 1 558 ALA n 1 559 LYS n 1 560 GLU n 1 561 ILE n 1 562 ALA n 1 563 GLN n 1 564 ASN n 1 565 LYS n 1 566 LEU n 1 567 ASN n 1 568 THR n 1 569 ALA n 1 570 LEU n 1 571 SER n 1 572 SER n 1 573 PHE n 1 574 ALA n 1 575 VAL n 1 576 ILE n 1 577 SER n 1 578 GLU n 1 579 LYS n 1 580 VAL n 1 581 ALA n 1 582 GLN n 1 583 SER n 1 584 PHE n 1 585 ILE n 1 586 GLN n 1 587 GLU n 1 588 ALA n 1 589 LEU n 1 590 SER n 2 1 GLN n 2 2 LEU n 2 3 TRP n 2 4 VAL n 2 5 ASP n 2 6 SER n 2 7 THR n 2 8 PRO n 2 9 PRO n 2 10 PRO n 2 11 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'CLOSTRIDIUM PERFRINGENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1502 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant PLYSS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HOMO SAPIENS' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP OGA_CLOP1 1 ? ? Q0TR53 ? 2 UNP P53_HUMAN 2 ? ? P04637 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2YDR A 3 ? 590 ? Q0TR53 31 ? 618 ? 31 618 2 2 2YDR P 1 ? 11 ? P04637 144 ? 154 ? 144 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YDR GLY A 1 ? UNP Q0TR53 ? ? 'expression tag' 29 1 1 2YDR SER A 2 ? UNP Q0TR53 ? ? 'expression tag' 30 2 1 2YDR ASN A 270 ? UNP Q0TR53 ASP 298 'engineered mutation' 298 3 1 2YDR ASP A 360 ? UNP Q0TR53 ASN 388 conflict 388 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YDR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.5 _exptl_crystal.density_percent_sol 72 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.6 M NAAC, 0.175 M CDSO4, 0.1 M HEPES PH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2010-08-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength 0.976 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YDR _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.00 _reflns.d_resolution_high 2.75 _reflns.number_obs 28111 _reflns.number_all ? _reflns.percent_possible_obs 92.5 _reflns.pdbx_Rmerge_I_obs 0.15 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.75 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 94.2 _reflns_shell.Rmerge_I_obs 0.58 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.30 _reflns_shell.pdbx_redundancy 2.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YDR _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27528 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.00 _refine.ls_d_res_high 2.75 _refine.ls_percent_reflns_obs 92.71 _refine.ls_R_factor_obs 0.18579 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18507 _refine.ls_R_factor_R_free 0.21881 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 2.1 _refine.ls_number_reflns_R_free 583 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.931 _refine.correlation_coeff_Fo_to_Fc_free 0.908 _refine.B_iso_mean 28.560 _refine.aniso_B[1][1] 1.47 _refine.aniso_B[2][2] 1.47 _refine.aniso_B[3][3] -2.20 _refine.aniso_B[1][2] 0.73 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2J62' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.397 _refine.pdbx_overall_ESU_R_Free 0.259 _refine.overall_SU_ML 0.184 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.629 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4638 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 4773 _refine_hist.d_res_high 2.75 _refine_hist.d_res_low 25.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 4751 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.425 1.954 ? 6455 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.122 5.000 ? 585 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.878 25.943 ? 244 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.106 15.000 ? 795 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.683 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.095 0.200 ? 704 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 3680 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.563 1.500 ? 2925 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.169 2.000 ? 4716 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.871 3.000 ? 1826 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.356 4.500 ? 1739 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free 16.071 3.000 ? 18 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.750 _refine_ls_shell.d_res_low 2.821 _refine_ls_shell.number_reflns_R_work 2035 _refine_ls_shell.R_factor_R_work 0.284 _refine_ls_shell.percent_reflns_obs 94.36 _refine_ls_shell.R_factor_R_free 0.320 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2YDR _struct.title 'CpOGA D298N in complex with p53-derived O-GlcNAc peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YDR _struct_keywords.pdbx_keywords HYDROLASE/PEPTIDE _struct_keywords.text 'HYDROLASE-PEPTIDE COMPLEX, CELL CYCLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 4 ? V N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 47 ? ASN A 61 ? ASP A 75 ASN A 89 1 ? 15 HELX_P HELX_P2 2 ILE A 85 ? ASN A 93 ? ILE A 113 ASN A 121 1 ? 9 HELX_P HELX_P3 3 ASP A 120 ? VAL A 135 ? ASP A 148 VAL A 163 1 ? 16 HELX_P HELX_P4 4 THR A 166 ? ASN A 180 ? THR A 194 ASN A 208 1 ? 15 HELX_P HELX_P5 5 PRO A 204 ? ASN A 221 ? PRO A 232 ASN A 249 1 ? 18 HELX_P HELX_P6 6 ASP A 238 ? ASP A 258 ? ASP A 266 ASP A 286 1 ? 21 HELX_P HELX_P7 7 SER A 275 ? PHE A 290 ? SER A 303 PHE A 318 1 ? 16 HELX_P HELX_P8 8 PHE A 290 ? GLY A 295 ? PHE A 318 GLY A 323 1 ? 6 HELX_P HELX_P9 9 ASP A 308 ? MET A 312 ? ASP A 336 MET A 340 1 ? 5 HELX_P HELX_P10 10 ARG A 319 ? VAL A 329 ? ARG A 347 VAL A 357 1 ? 11 HELX_P HELX_P11 11 PRO A 348 ? ASP A 360 ? PRO A 376 ASP A 388 1 ? 13 HELX_P HELX_P12 12 GLY A 390 ? GLN A 393 ? GLY A 418 GLN A 421 5 ? 4 HELX_P HELX_P13 13 HIS A 405 ? ASN A 422 ? HIS A 433 ASN A 450 1 ? 18 HELX_P HELX_P14 14 ASP A 427 ? GLY A 441 ? ASP A 455 GLY A 469 1 ? 15 HELX_P HELX_P15 15 LEU A 443 ? ASN A 452 ? LEU A 471 ASN A 480 1 ? 10 HELX_P HELX_P16 16 ALA A 470 ? SER A 486 ? ALA A 498 SER A 514 1 ? 17 HELX_P HELX_P17 17 ALA A 490 ? LEU A 515 ? ALA A 518 LEU A 543 1 ? 26 HELX_P HELX_P18 18 PRO A 516 ? ASN A 549 ? PRO A 544 ASN A 577 1 ? 34 HELX_P HELX_P19 19 ASP A 551 ? SER A 572 ? ASP A 579 SER A 600 1 ? 22 HELX_P HELX_P20 20 VAL A 580 ? LEU A 589 ? VAL A 608 LEU A 617 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B SER 6 OG ? ? ? 1_555 U NAG . C1 ? ? P SER 149 P NAG 1153 1_555 ? ? ? ? ? ? ? 1.427 ? O-Glycosylation metalc1 metalc ? ? A GLU 23 OE1 ? ? ? 1_555 O CD . CD ? ? A GLU 51 A CD 1632 1_555 ? ? ? ? ? ? ? 2.595 ? ? metalc2 metalc ? ? A GLU 23 OE2 ? ? ? 1_555 O CD . CD ? ? A GLU 51 A CD 1632 1_555 ? ? ? ? ? ? ? 1.916 ? ? metalc3 metalc ? ? A GLU 26 OE1 ? ? ? 5_554 R CD . CD ? ? A GLU 54 A CD 1635 1_555 ? ? ? ? ? ? ? 2.912 ? ? metalc4 metalc ? ? A ASP 30 OD2 ? ? ? 1_555 Q CD . CD ? ? A ASP 58 A CD 1634 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc5 metalc ? ? A ASP 30 OD1 ? ? ? 1_555 Q CD . CD ? ? A ASP 58 A CD 1634 1_555 ? ? ? ? ? ? ? 2.848 ? ? metalc6 metalc ? ? A LEU 40 O ? ? ? 1_555 C CD . CD ? ? A LEU 68 A CD 1620 1_555 ? ? ? ? ? ? ? 2.378 ? ? metalc7 metalc ? ? A GLU 43 OE1 ? ? ? 1_555 C CD . CD ? ? A GLU 71 A CD 1620 1_555 ? ? ? ? ? ? ? 2.466 ? ? metalc8 metalc ? ? A GLU 43 OE2 ? ? ? 1_555 C CD . CD ? ? A GLU 71 A CD 1620 1_555 ? ? ? ? ? ? ? 3.011 ? ? metalc9 metalc ? ? A GLU 45 O ? ? ? 1_555 D CD . CD ? ? A GLU 73 A CD 1621 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc10 metalc ? ? A GLU 80 OE1 ? ? ? 1_555 D CD . CD ? ? A GLU 108 A CD 1621 1_555 ? ? ? ? ? ? ? 2.101 ? ? metalc11 metalc ? ? A ASP 83 OD1 ? ? ? 1_555 D CD . CD ? ? A ASP 111 A CD 1621 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc12 metalc ? ? A ASP 83 OD2 ? ? ? 1_555 D CD . CD ? ? A ASP 111 A CD 1621 1_555 ? ? ? ? ? ? ? 2.792 ? ? metalc13 metalc ? ? A ASP 84 OD2 ? ? ? 1_555 E CD . CD ? ? A ASP 112 A CD 1622 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc14 metalc ? ? A ASP 89 OD1 ? ? ? 1_555 F CD . CD ? ? A ASP 117 A CD 1623 1_555 ? ? ? ? ? ? ? 2.289 ? ? metalc15 metalc ? ? A ASP 89 OD2 ? ? ? 1_555 F CD . CD ? ? A ASP 117 A CD 1623 1_555 ? ? ? ? ? ? ? 2.918 ? ? metalc16 metalc ? ? A ASP 111 OD2 ? ? ? 1_555 G CD . CD ? ? A ASP 139 A CD 1624 1_555 ? ? ? ? ? ? ? 2.598 ? ? metalc17 metalc ? ? A ASP 111 OD1 ? ? ? 1_555 G CD . CD ? ? A ASP 139 A CD 1624 1_555 ? ? ? ? ? ? ? 2.661 ? ? metalc18 metalc ? ? A GLU 117 OE1 ? ? ? 1_555 F CD . CD ? ? A GLU 145 A CD 1623 1_555 ? ? ? ? ? ? ? 3.192 ? ? metalc19 metalc ? ? A GLU 117 OE2 ? ? ? 1_555 F CD . CD ? ? A GLU 145 A CD 1623 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc20 metalc ? ? A GLU 142 OE1 ? ? ? 1_555 I CD . CD ? ? A GLU 170 A CD 1626 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc21 metalc ? ? A GLU 142 OE2 ? ? ? 1_555 I CD . CD ? ? A GLU 170 A CD 1626 1_555 ? ? ? ? ? ? ? 2.606 ? ? metalc22 metalc ? ? A ASP 224 OD1 ? ? ? 1_555 H CD . CD ? ? A ASP 252 A CD 1625 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc23 metalc ? ? A ASP 238 OD2 ? ? ? 1_555 R CD . CD ? ? A ASP 266 A CD 1635 1_555 ? ? ? ? ? ? ? 2.678 ? ? metalc24 metalc ? ? A ASP 240 OD1 ? ? ? 6_555 G CD . CD ? ? A ASP 268 A CD 1624 1_555 ? ? ? ? ? ? ? 3.148 ? ? metalc25 metalc ? ? A ASP 240 OD2 ? ? ? 6_555 G CD . CD ? ? A ASP 268 A CD 1624 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc26 metalc ? ? A GLU 244 OE2 ? ? ? 1_555 J CD . CD ? ? A GLU 272 A CD 1627 1_555 ? ? ? ? ? ? ? 2.528 ? ? metalc27 metalc ? ? A GLU 244 OE2 ? ? ? 6_555 Q CD . CD ? ? A GLU 272 A CD 1634 1_555 ? ? ? ? ? ? ? 2.575 ? ? metalc28 metalc ? ? A GLU 244 OE1 ? ? ? 6_555 Q CD . CD ? ? A GLU 272 A CD 1634 1_555 ? ? ? ? ? ? ? 1.991 ? ? metalc29 metalc ? ? A HIS 248 NE2 ? ? ? 1_555 J CD . CD ? ? A HIS 276 A CD 1627 1_555 ? ? ? ? ? ? ? 2.611 ? ? metalc30 metalc ? ? A GLU 254 OE2 ? ? ? 1_555 K CD . CD ? ? A GLU 282 A CD 1628 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc31 metalc ? ? A ASP 258 OD2 ? ? ? 1_555 K CD . CD ? ? A ASP 286 A CD 1628 1_555 ? ? ? ? ? ? ? 2.582 ? ? metalc32 metalc ? ? A ASP 258 OD1 ? ? ? 1_555 K CD . CD ? ? A ASP 286 A CD 1628 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc33 metalc ? ? A LYS 278 NZ ? ? ? 1_555 R CD . CD ? ? A LYS 306 A CD 1635 1_555 ? ? ? ? ? ? ? 2.776 ? ? metalc34 metalc ? ? A GLU 334 OE1 ? ? ? 1_555 L CD . CD ? ? A GLU 362 A CD 1629 1_555 ? ? ? ? ? ? ? 2.577 ? ? metalc35 metalc ? ? A GLU 334 OE2 ? ? ? 1_555 L CD . CD ? ? A GLU 362 A CD 1629 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc36 metalc ? ? A LYS 376 O ? ? ? 1_555 N CD . CD ? ? A LYS 404 A CD 1631 1_555 ? ? ? ? ? ? ? 2.648 ? ? metalc37 metalc ? ? A HIS 385 NE2 ? ? ? 1_555 M CD . CD ? ? A HIS 413 A CD 1630 1_555 ? ? ? ? ? ? ? 2.322 ? ? metalc38 metalc ? ? A ASP 396 OD1 ? ? ? 1_555 L CD . CD ? ? A ASP 424 A CD 1629 1_555 ? ? ? ? ? ? ? 2.752 ? ? metalc39 metalc ? ? A ASP 396 OD2 ? ? ? 1_555 L CD . CD ? ? A ASP 424 A CD 1629 1_555 ? ? ? ? ? ? ? 2.133 ? ? metalc40 metalc ? ? A HIS 405 NE2 ? ? ? 1_555 N CD . CD ? ? A HIS 433 A CD 1631 1_555 ? ? ? ? ? ? ? 2.659 ? ? metalc41 metalc ? ? A ASN 422 OD1 ? ? ? 1_555 O CD . CD ? ? A ASN 450 A CD 1632 1_555 ? ? ? ? ? ? ? 2.526 ? ? metalc42 metalc ? ? A ASP 424 OD1 ? ? ? 1_555 O CD . CD ? ? A ASP 452 A CD 1632 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc43 metalc ? ? A ASP 446 OD2 ? ? ? 1_555 S CD . CD ? ? A ASP 474 A CD 1636 1_555 ? ? ? ? ? ? ? 2.358 ? ? metalc44 metalc ? ? A ASP 446 OD1 ? ? ? 1_555 S CD . CD ? ? A ASP 474 A CD 1636 1_555 ? ? ? ? ? ? ? 2.653 ? ? metalc45 metalc ? ? A GLU 506 OE1 ? ? ? 1_555 S CD . CD ? ? A GLU 534 A CD 1636 1_555 ? ? ? ? ? ? ? 2.619 ? ? metalc46 metalc ? ? A GLU 506 OE2 ? ? ? 1_555 S CD . CD ? ? A GLU 534 A CD 1636 1_555 ? ? ? ? ? ? ? 3.245 ? ? metalc47 metalc ? ? A GLU 517 OE1 ? ? ? 2_545 F CD . CD ? ? A GLU 545 A CD 1623 1_555 ? ? ? ? ? ? ? 1.865 ? ? metalc48 metalc ? ? A GLU 517 OE2 ? ? ? 2_545 F CD . CD ? ? A GLU 545 A CD 1623 1_555 ? ? ? ? ? ? ? 2.839 ? ? metalc49 metalc ? ? A GLU 517 OE2 ? ? ? 2_545 T CD . CD ? ? A GLU 545 A CD 1637 1_555 ? ? ? ? ? ? ? 2.676 ? ? metalc50 metalc ? ? A GLU 521 OE2 ? ? ? 2_545 T CD . CD ? ? A GLU 549 A CD 1637 1_555 ? ? ? ? ? ? ? 2.456 ? ? metalc51 metalc ? ? A GLU 521 OE1 ? ? ? 2_545 T CD . CD ? ? A GLU 549 A CD 1637 1_555 ? ? ? ? ? ? ? 2.561 ? ? metalc52 metalc ? ? A GLU 522 OE2 ? ? ? 2_545 E CD . CD ? ? A GLU 550 A CD 1622 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc53 metalc ? ? A GLU 553 OE1 ? ? ? 1_555 P CD . CD ? ? A GLU 581 A CD 1633 1_555 ? ? ? ? ? ? ? 2.680 ? ? metalc54 metalc ? ? A GLU 560 OE1 ? ? ? 2_545 K CD . CD ? ? A GLU 588 A CD 1628 1_555 ? ? ? ? ? ? ? 2.596 ? ? metalc55 metalc ? ? A GLU 560 OE2 ? ? ? 2_545 K CD . CD ? ? A GLU 588 A CD 1628 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc56 metalc ? ? C CD . CD ? ? ? 1_555 V HOH . O ? ? A CD 1620 A HOH 2008 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc57 metalc ? ? I CD . CD ? ? ? 1_555 V HOH . O ? ? A CD 1626 A HOH 2005 1_555 ? ? ? ? ? ? ? 2.934 ? ? metalc58 metalc ? ? J CD . CD ? ? ? 1_555 V HOH . O ? ? A CD 1627 A HOH 2046 1_555 ? ? ? ? ? ? ? 1.869 ? ? metalc59 metalc ? ? J CD . CD ? ? ? 1_555 V HOH . O ? ? A CD 1627 A HOH 2047 1_555 ? ? ? ? ? ? ? 2.062 ? ? metalc60 metalc ? ? L CD . CD ? ? ? 1_555 V HOH . O ? ? A CD 1629 A HOH 2062 1_555 ? ? ? ? ? ? ? 3.137 ? ? metalc61 metalc ? ? N CD . CD ? ? ? 1_555 V HOH . O ? ? A CD 1631 A HOH 2096 1_555 ? ? ? ? ? ? ? 2.956 ? ? metalc62 metalc ? ? Q CD . CD ? ? ? 1_555 V HOH . O ? ? A CD 1634 A HOH 2006 1_555 ? ? ? ? ? ? ? 2.165 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 19 A . ? ASN 47 A PRO 20 A ? PRO 48 A 1 -4.24 2 TYR 369 A . ? TYR 397 A PRO 370 A ? PRO 398 A 1 12.09 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 7 ? AB ? 2 ? AC ? 9 ? AD ? 2 ? AE ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? parallel AA 5 6 ? parallel AA 6 7 ? parallel AB 1 2 ? anti-parallel AC 1 2 ? parallel AC 2 3 ? parallel AC 3 4 ? parallel AC 4 5 ? parallel AC 5 6 ? parallel AC 6 7 ? parallel AC 7 8 ? parallel AC 8 9 ? parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ASN A 24 ? VAL A 27 ? ASN A 52 VAL A 55 AA 2 VAL A 143 ? ASP A 147 ? VAL A 171 ASP A 175 AA 3 TYR A 105 ? ASN A 110 ? TYR A 133 ASN A 138 AA 4 LYS A 113 ? GLY A 118 ? LYS A 141 GLY A 146 AA 5 THR A 75 ? GLU A 80 ? THR A 103 GLU A 108 AA 6 SER A 37 ? VAL A 41 ? SER A 65 VAL A 69 AA 7 GLU A 64 ? ILE A 65 ? GLU A 92 ILE A 93 AB 1 PHE A 32 ? LYS A 33 ? PHE A 60 LYS A 61 AB 2 ASN A 139 ? ILE A 140 ? ASN A 167 ILE A 168 AC 1 ALA A 153 ? GLU A 158 ? ALA A 181 GLU A 186 AC 2 VAL A 395 ? VAL A 400 ? VAL A 423 VAL A 428 AC 3 MET A 363 ? TRP A 367 ? MET A 391 TRP A 395 AC 4 GLU A 334 ? TRP A 337 ? GLU A 362 TRP A 365 AC 5 ILE A 301 ? VAL A 303 ? ILE A 329 VAL A 331 AC 6 SER A 263 ? TYR A 267 ? SER A 291 TYR A 295 AC 7 ASP A 224 ? ILE A 229 ? ASP A 252 ILE A 257 AC 8 THR A 184 ? TYR A 187 ? THR A 212 TYR A 215 AC 9 ALA A 153 ? GLU A 158 ? ALA A 181 GLU A 186 AD 1 VAL A 313 ? SER A 314 ? VAL A 341 SER A 342 AD 2 GLN A 317 ? PRO A 318 ? GLN A 345 PRO A 346 AE 1 MET A 457 ? ASP A 458 ? MET A 485 ASP A 486 AE 2 LYS A 464 ? SER A 465 ? LYS A 492 SER A 493 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLU A 26 ? N GLU A 54 O ASN A 144 ? O ASN A 172 AA 2 3 N ASP A 147 ? N ASP A 175 O TYR A 105 ? O TYR A 133 AA 3 4 N ASN A 110 ? N ASN A 138 O LYS A 113 ? O LYS A 141 AA 4 5 N ILE A 114 ? N ILE A 142 O THR A 75 ? O THR A 103 AA 5 6 N LEU A 76 ? N LEU A 104 O ASN A 39 ? O ASN A 67 AA 6 7 N ILE A 38 ? N ILE A 66 O GLU A 64 ? O GLU A 92 AB 1 2 N PHE A 32 ? N PHE A 60 O ILE A 140 ? O ILE A 168 AC 1 2 N ALA A 153 ? N ALA A 181 O ASP A 396 ? O ASP A 424 AC 2 3 N ASP A 396 ? N ASP A 424 O MET A 363 ? O MET A 391 AC 3 4 N ALA A 364 ? N ALA A 392 O VAL A 335 ? O VAL A 363 AC 4 5 N MET A 336 ? N MET A 364 O THR A 302 ? O THR A 330 AC 5 6 N ILE A 301 ? N ILE A 329 O PHE A 264 ? O PHE A 292 AC 6 7 N SER A 263 ? N SER A 291 O PHE A 225 ? O PHE A 253 AC 7 8 N VAL A 226 ? N VAL A 254 O TYR A 185 ? O TYR A 213 AC 8 9 N THR A 184 ? N THR A 212 O ARG A 154 ? O ARG A 182 AD 1 2 N SER A 314 ? N SER A 342 O GLN A 317 ? O GLN A 345 AE 1 2 N MET A 457 ? N MET A 485 O SER A 465 ? O SER A 493 # _database_PDB_matrix.entry_id 2YDR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YDR _atom_sites.fract_transf_matrix[1][1] 0.008478 _atom_sites.fract_transf_matrix[1][2] 0.004895 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009790 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006751 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 29 ? ? ? A . n A 1 2 SER 2 30 ? ? ? A . n A 1 3 VAL 3 31 ? ? ? A . n A 1 4 GLY 4 32 ? ? ? A . n A 1 5 PRO 5 33 ? ? ? A . n A 1 6 LYS 6 34 ? ? ? A . n A 1 7 THR 7 35 ? ? ? A . n A 1 8 GLY 8 36 ? ? ? A . n A 1 9 GLU 9 37 ? ? ? A . n A 1 10 GLU 10 38 ? ? ? A . n A 1 11 ASN 11 39 ? ? ? A . n A 1 12 GLN 12 40 40 GLN GLN A . n A 1 13 VAL 13 41 41 VAL VAL A . n A 1 14 LEU 14 42 42 LEU LEU A . n A 1 15 VAL 15 43 43 VAL VAL A . n A 1 16 PRO 16 44 44 PRO PRO A . n A 1 17 ASN 17 45 45 ASN ASN A . n A 1 18 LEU 18 46 46 LEU LEU A . n A 1 19 ASN 19 47 47 ASN ASN A . n A 1 20 PRO 20 48 48 PRO PRO A . n A 1 21 THR 21 49 49 THR THR A . n A 1 22 PRO 22 50 50 PRO PRO A . n A 1 23 GLU 23 51 51 GLU GLU A . n A 1 24 ASN 24 52 52 ASN ASN A . n A 1 25 LEU 25 53 53 LEU LEU A . n A 1 26 GLU 26 54 54 GLU GLU A . n A 1 27 VAL 27 55 55 VAL VAL A . n A 1 28 VAL 28 56 56 VAL VAL A . n A 1 29 GLY 29 57 57 GLY GLY A . n A 1 30 ASP 30 58 58 ASP ASP A . n A 1 31 GLY 31 59 59 GLY GLY A . n A 1 32 PHE 32 60 60 PHE PHE A . n A 1 33 LYS 33 61 61 LYS LYS A . n A 1 34 ILE 34 62 62 ILE ILE A . n A 1 35 THR 35 63 63 THR THR A . n A 1 36 SER 36 64 64 SER SER A . n A 1 37 SER 37 65 65 SER SER A . n A 1 38 ILE 38 66 66 ILE ILE A . n A 1 39 ASN 39 67 67 ASN ASN A . n A 1 40 LEU 40 68 68 LEU LEU A . n A 1 41 VAL 41 69 69 VAL VAL A . n A 1 42 GLY 42 70 70 GLY GLY A . n A 1 43 GLU 43 71 71 GLU GLU A . n A 1 44 GLU 44 72 72 GLU GLU A . n A 1 45 GLU 45 73 73 GLU GLU A . n A 1 46 ALA 46 74 74 ALA ALA A . n A 1 47 ASP 47 75 75 ASP ASP A . n A 1 48 GLU 48 76 76 GLU GLU A . n A 1 49 ASN 49 77 77 ASN ASN A . n A 1 50 ALA 50 78 78 ALA ALA A . n A 1 51 VAL 51 79 79 VAL VAL A . n A 1 52 ASN 52 80 80 ASN ASN A . n A 1 53 ALA 53 81 81 ALA ALA A . n A 1 54 LEU 54 82 82 LEU LEU A . n A 1 55 ARG 55 83 83 ARG ARG A . n A 1 56 GLU 56 84 84 GLU GLU A . n A 1 57 PHE 57 85 85 PHE PHE A . n A 1 58 LEU 58 86 86 LEU LEU A . n A 1 59 THR 59 87 87 THR THR A . n A 1 60 ALA 60 88 88 ALA ALA A . n A 1 61 ASN 61 89 89 ASN ASN A . n A 1 62 ASN 62 90 90 ASN ASN A . n A 1 63 ILE 63 91 91 ILE ILE A . n A 1 64 GLU 64 92 92 GLU GLU A . n A 1 65 ILE 65 93 93 ILE ILE A . n A 1 66 ASN 66 94 94 ASN ASN A . n A 1 67 SER 67 95 95 SER SER A . n A 1 68 GLU 68 96 96 GLU GLU A . n A 1 69 ASN 69 97 97 ASN ASN A . n A 1 70 ASP 70 98 98 ASP ASP A . n A 1 71 PRO 71 99 99 PRO PRO A . n A 1 72 ASN 72 100 100 ASN ASN A . n A 1 73 SER 73 101 101 SER SER A . n A 1 74 THR 74 102 102 THR THR A . n A 1 75 THR 75 103 103 THR THR A . n A 1 76 LEU 76 104 104 LEU LEU A . n A 1 77 ILE 77 105 105 ILE ILE A . n A 1 78 ILE 78 106 106 ILE ILE A . n A 1 79 GLY 79 107 107 GLY GLY A . n A 1 80 GLU 80 108 108 GLU GLU A . n A 1 81 VAL 81 109 109 VAL VAL A . n A 1 82 ASP 82 110 110 ASP ASP A . n A 1 83 ASP 83 111 111 ASP ASP A . n A 1 84 ASP 84 112 112 ASP ASP A . n A 1 85 ILE 85 113 113 ILE ILE A . n A 1 86 PRO 86 114 114 PRO PRO A . n A 1 87 GLU 87 115 115 GLU GLU A . n A 1 88 LEU 88 116 116 LEU LEU A . n A 1 89 ASP 89 117 117 ASP ASP A . n A 1 90 GLU 90 118 118 GLU GLU A . n A 1 91 ALA 91 119 119 ALA ALA A . n A 1 92 LEU 92 120 120 LEU LEU A . n A 1 93 ASN 93 121 121 ASN ASN A . n A 1 94 GLY 94 122 122 GLY GLY A . n A 1 95 THR 95 123 123 THR THR A . n A 1 96 THR 96 124 124 THR THR A . n A 1 97 ALA 97 125 125 ALA ALA A . n A 1 98 GLU 98 126 126 GLU GLU A . n A 1 99 ASN 99 127 127 ASN ASN A . n A 1 100 LEU 100 128 128 LEU LEU A . n A 1 101 LYS 101 129 129 LYS LYS A . n A 1 102 GLU 102 130 130 GLU GLU A . n A 1 103 GLU 103 131 131 GLU GLU A . n A 1 104 GLY 104 132 132 GLY GLY A . n A 1 105 TYR 105 133 133 TYR TYR A . n A 1 106 ALA 106 134 134 ALA ALA A . n A 1 107 LEU 107 135 135 LEU LEU A . n A 1 108 VAL 108 136 136 VAL VAL A . n A 1 109 SER 109 137 137 SER SER A . n A 1 110 ASN 110 138 138 ASN ASN A . n A 1 111 ASP 111 139 139 ASP ASP A . n A 1 112 GLY 112 140 140 GLY GLY A . n A 1 113 LYS 113 141 141 LYS LYS A . n A 1 114 ILE 114 142 142 ILE ILE A . n A 1 115 ALA 115 143 143 ALA ALA A . n A 1 116 ILE 116 144 144 ILE ILE A . n A 1 117 GLU 117 145 145 GLU GLU A . n A 1 118 GLY 118 146 146 GLY GLY A . n A 1 119 LYS 119 147 147 LYS LYS A . n A 1 120 ASP 120 148 148 ASP ASP A . n A 1 121 GLY 121 149 149 GLY GLY A . n A 1 122 ASP 122 150 150 ASP ASP A . n A 1 123 GLY 123 151 151 GLY GLY A . n A 1 124 THR 124 152 152 THR THR A . n A 1 125 PHE 125 153 153 PHE PHE A . n A 1 126 TYR 126 154 154 TYR TYR A . n A 1 127 GLY 127 155 155 GLY GLY A . n A 1 128 VAL 128 156 156 VAL VAL A . n A 1 129 GLN 129 157 157 GLN GLN A . n A 1 130 THR 130 158 158 THR THR A . n A 1 131 PHE 131 159 159 PHE PHE A . n A 1 132 LYS 132 160 160 LYS LYS A . n A 1 133 GLN 133 161 161 GLN GLN A . n A 1 134 LEU 134 162 162 LEU LEU A . n A 1 135 VAL 135 163 163 VAL VAL A . n A 1 136 LYS 136 164 164 LYS LYS A . n A 1 137 GLU 137 165 165 GLU GLU A . n A 1 138 SER 138 166 166 SER SER A . n A 1 139 ASN 139 167 167 ASN ASN A . n A 1 140 ILE 140 168 168 ILE ILE A . n A 1 141 PRO 141 169 169 PRO PRO A . n A 1 142 GLU 142 170 170 GLU GLU A . n A 1 143 VAL 143 171 171 VAL VAL A . n A 1 144 ASN 144 172 172 ASN ASN A . n A 1 145 ILE 145 173 173 ILE ILE A . n A 1 146 THR 146 174 174 THR THR A . n A 1 147 ASP 147 175 175 ASP ASP A . n A 1 148 TYR 148 176 176 TYR TYR A . n A 1 149 PRO 149 177 177 PRO PRO A . n A 1 150 THR 150 178 178 THR THR A . n A 1 151 VAL 151 179 179 VAL VAL A . n A 1 152 SER 152 180 180 SER SER A . n A 1 153 ALA 153 181 181 ALA ALA A . n A 1 154 ARG 154 182 182 ARG ARG A . n A 1 155 GLY 155 183 183 GLY GLY A . n A 1 156 ILE 156 184 184 ILE ILE A . n A 1 157 VAL 157 185 185 VAL VAL A . n A 1 158 GLU 158 186 186 GLU GLU A . n A 1 159 GLY 159 187 187 GLY GLY A . n A 1 160 PHE 160 188 188 PHE PHE A . n A 1 161 TYR 161 189 189 TYR TYR A . n A 1 162 GLY 162 190 190 GLY GLY A . n A 1 163 THR 163 191 191 THR THR A . n A 1 164 PRO 164 192 192 PRO PRO A . n A 1 165 TRP 165 193 193 TRP TRP A . n A 1 166 THR 166 194 194 THR THR A . n A 1 167 HIS 167 195 195 HIS HIS A . n A 1 168 GLN 168 196 196 GLN GLN A . n A 1 169 ASP 169 197 197 ASP ASP A . n A 1 170 ARG 170 198 198 ARG ARG A . n A 1 171 LEU 171 199 199 LEU LEU A . n A 1 172 ASP 172 200 200 ASP ASP A . n A 1 173 GLN 173 201 201 GLN GLN A . n A 1 174 ILE 174 202 202 ILE ILE A . n A 1 175 LYS 175 203 203 LYS LYS A . n A 1 176 PHE 176 204 204 PHE PHE A . n A 1 177 TYR 177 205 205 TYR TYR A . n A 1 178 GLY 178 206 206 GLY GLY A . n A 1 179 GLU 179 207 207 GLU GLU A . n A 1 180 ASN 180 208 208 ASN ASN A . n A 1 181 LYS 181 209 209 LYS LYS A . n A 1 182 LEU 182 210 210 LEU LEU A . n A 1 183 ASN 183 211 211 ASN ASN A . n A 1 184 THR 184 212 212 THR THR A . n A 1 185 TYR 185 213 213 TYR TYR A . n A 1 186 ILE 186 214 214 ILE ILE A . n A 1 187 TYR 187 215 215 TYR TYR A . n A 1 188 ALA 188 216 216 ALA ALA A . n A 1 189 PRO 189 217 217 PRO PRO A . n A 1 190 LYS 190 218 218 LYS LYS A . n A 1 191 ASP 191 219 219 ASP ASP A . n A 1 192 ASP 192 220 220 ASP ASP A . n A 1 193 PRO 193 221 221 PRO PRO A . n A 1 194 TYR 194 222 222 TYR TYR A . n A 1 195 HIS 195 223 223 HIS HIS A . n A 1 196 ARG 196 224 224 ARG ARG A . n A 1 197 GLU 197 225 225 GLU GLU A . n A 1 198 LYS 198 226 226 LYS LYS A . n A 1 199 TRP 199 227 227 TRP TRP A . n A 1 200 ARG 200 228 228 ARG ARG A . n A 1 201 GLU 201 229 229 GLU GLU A . n A 1 202 PRO 202 230 230 PRO PRO A . n A 1 203 TYR 203 231 231 TYR TYR A . n A 1 204 PRO 204 232 232 PRO PRO A . n A 1 205 GLU 205 233 233 GLU GLU A . n A 1 206 SER 206 234 234 SER SER A . n A 1 207 GLU 207 235 235 GLU GLU A . n A 1 208 MET 208 236 236 MET MET A . n A 1 209 GLN 209 237 237 GLN GLN A . n A 1 210 ARG 210 238 238 ARG ARG A . n A 1 211 MET 211 239 239 MET MET A . n A 1 212 GLN 212 240 240 GLN GLN A . n A 1 213 GLU 213 241 241 GLU GLU A . n A 1 214 LEU 214 242 242 LEU LEU A . n A 1 215 ILE 215 243 243 ILE ILE A . n A 1 216 ASN 216 244 244 ASN ASN A . n A 1 217 ALA 217 245 245 ALA ALA A . n A 1 218 SER 218 246 246 SER SER A . n A 1 219 ALA 219 247 247 ALA ALA A . n A 1 220 GLU 220 248 248 GLU GLU A . n A 1 221 ASN 221 249 249 ASN ASN A . n A 1 222 LYS 222 250 250 LYS LYS A . n A 1 223 VAL 223 251 251 VAL VAL A . n A 1 224 ASP 224 252 252 ASP ASP A . n A 1 225 PHE 225 253 253 PHE PHE A . n A 1 226 VAL 226 254 254 VAL VAL A . n A 1 227 PHE 227 255 255 PHE PHE A . n A 1 228 GLY 228 256 256 GLY GLY A . n A 1 229 ILE 229 257 257 ILE ILE A . n A 1 230 SER 230 258 258 SER SER A . n A 1 231 PRO 231 259 259 PRO PRO A . n A 1 232 GLY 232 260 260 GLY GLY A . n A 1 233 ILE 233 261 261 ILE ILE A . n A 1 234 ASP 234 262 262 ASP ASP A . n A 1 235 ILE 235 263 263 ILE ILE A . n A 1 236 ARG 236 264 264 ARG ARG A . n A 1 237 PHE 237 265 265 PHE PHE A . n A 1 238 ASP 238 266 266 ASP ASP A . n A 1 239 GLY 239 267 267 GLY GLY A . n A 1 240 ASP 240 268 268 ASP ASP A . n A 1 241 ALA 241 269 269 ALA ALA A . n A 1 242 GLY 242 270 270 GLY GLY A . n A 1 243 GLU 243 271 271 GLU GLU A . n A 1 244 GLU 244 272 272 GLU GLU A . n A 1 245 ASP 245 273 273 ASP ASP A . n A 1 246 PHE 246 274 274 PHE PHE A . n A 1 247 ASN 247 275 275 ASN ASN A . n A 1 248 HIS 248 276 276 HIS HIS A . n A 1 249 LEU 249 277 277 LEU LEU A . n A 1 250 ILE 250 278 278 ILE ILE A . n A 1 251 THR 251 279 279 THR THR A . n A 1 252 LYS 252 280 280 LYS LYS A . n A 1 253 ALA 253 281 281 ALA ALA A . n A 1 254 GLU 254 282 282 GLU GLU A . n A 1 255 SER 255 283 283 SER SER A . n A 1 256 LEU 256 284 284 LEU LEU A . n A 1 257 TYR 257 285 285 TYR TYR A . n A 1 258 ASP 258 286 286 ASP ASP A . n A 1 259 MET 259 287 287 MET MET A . n A 1 260 GLY 260 288 288 GLY GLY A . n A 1 261 VAL 261 289 289 VAL VAL A . n A 1 262 ARG 262 290 290 ARG ARG A . n A 1 263 SER 263 291 291 SER SER A . n A 1 264 PHE 264 292 292 PHE PHE A . n A 1 265 ALA 265 293 293 ALA ALA A . n A 1 266 ILE 266 294 294 ILE ILE A . n A 1 267 TYR 267 295 295 TYR TYR A . n A 1 268 TRP 268 296 296 TRP TRP A . n A 1 269 ASP 269 297 297 ASP ASP A . n A 1 270 ASN 270 298 298 ASN ASN A . n A 1 271 ILE 271 299 299 ILE ILE A . n A 1 272 GLN 272 300 300 GLN GLN A . n A 1 273 ASP 273 301 301 ASP ASP A . n A 1 274 LYS 274 302 302 LYS LYS A . n A 1 275 SER 275 303 303 SER SER A . n A 1 276 ALA 276 304 304 ALA ALA A . n A 1 277 ALA 277 305 305 ALA ALA A . n A 1 278 LYS 278 306 306 LYS LYS A . n A 1 279 HIS 279 307 307 HIS HIS A . n A 1 280 ALA 280 308 308 ALA ALA A . n A 1 281 GLN 281 309 309 GLN GLN A . n A 1 282 VAL 282 310 310 VAL VAL A . n A 1 283 LEU 283 311 311 LEU LEU A . n A 1 284 ASN 284 312 312 ASN ASN A . n A 1 285 ARG 285 313 313 ARG ARG A . n A 1 286 PHE 286 314 314 PHE PHE A . n A 1 287 ASN 287 315 315 ASN ASN A . n A 1 288 GLU 288 316 316 GLU GLU A . n A 1 289 GLU 289 317 317 GLU GLU A . n A 1 290 PHE 290 318 318 PHE PHE A . n A 1 291 VAL 291 319 319 VAL VAL A . n A 1 292 LYS 292 320 320 LYS LYS A . n A 1 293 ALA 293 321 321 ALA ALA A . n A 1 294 LYS 294 322 322 LYS LYS A . n A 1 295 GLY 295 323 323 GLY GLY A . n A 1 296 ASP 296 324 324 ASP ASP A . n A 1 297 VAL 297 325 325 VAL VAL A . n A 1 298 LYS 298 326 326 LYS LYS A . n A 1 299 PRO 299 327 327 PRO PRO A . n A 1 300 LEU 300 328 328 LEU LEU A . n A 1 301 ILE 301 329 329 ILE ILE A . n A 1 302 THR 302 330 330 THR THR A . n A 1 303 VAL 303 331 331 VAL VAL A . n A 1 304 PRO 304 332 332 PRO PRO A . n A 1 305 THR 305 333 333 THR THR A . n A 1 306 GLU 306 334 334 GLU GLU A . n A 1 307 TYR 307 335 335 TYR TYR A . n A 1 308 ASP 308 336 336 ASP ASP A . n A 1 309 THR 309 337 337 THR THR A . n A 1 310 GLY 310 338 338 GLY GLY A . n A 1 311 ALA 311 339 339 ALA ALA A . n A 1 312 MET 312 340 340 MET MET A . n A 1 313 VAL 313 341 341 VAL VAL A . n A 1 314 SER 314 342 342 SER SER A . n A 1 315 ASN 315 343 343 ASN ASN A . n A 1 316 GLY 316 344 344 GLY GLY A . n A 1 317 GLN 317 345 345 GLN GLN A . n A 1 318 PRO 318 346 346 PRO PRO A . n A 1 319 ARG 319 347 347 ARG ARG A . n A 1 320 ALA 320 348 348 ALA ALA A . n A 1 321 TYR 321 349 349 TYR TYR A . n A 1 322 THR 322 350 350 THR THR A . n A 1 323 ARG 323 351 351 ARG ARG A . n A 1 324 ILE 324 352 352 ILE ILE A . n A 1 325 PHE 325 353 353 PHE PHE A . n A 1 326 ALA 326 354 354 ALA ALA A . n A 1 327 GLU 327 355 355 GLU GLU A . n A 1 328 THR 328 356 356 THR THR A . n A 1 329 VAL 329 357 357 VAL VAL A . n A 1 330 ASP 330 358 358 ASP ASP A . n A 1 331 PRO 331 359 359 PRO PRO A . n A 1 332 SER 332 360 360 SER SER A . n A 1 333 ILE 333 361 361 ILE ILE A . n A 1 334 GLU 334 362 362 GLU GLU A . n A 1 335 VAL 335 363 363 VAL VAL A . n A 1 336 MET 336 364 364 MET MET A . n A 1 337 TRP 337 365 365 TRP TRP A . n A 1 338 THR 338 366 366 THR THR A . n A 1 339 GLY 339 367 367 GLY GLY A . n A 1 340 PRO 340 368 368 PRO PRO A . n A 1 341 GLY 341 369 369 GLY GLY A . n A 1 342 VAL 342 370 370 VAL VAL A . n A 1 343 VAL 343 371 371 VAL VAL A . n A 1 344 THR 344 372 372 THR THR A . n A 1 345 ASN 345 373 373 ASN ASN A . n A 1 346 GLU 346 374 374 GLU GLU A . n A 1 347 ILE 347 375 375 ILE ILE A . n A 1 348 PRO 348 376 376 PRO PRO A . n A 1 349 LEU 349 377 377 LEU LEU A . n A 1 350 SER 350 378 378 SER SER A . n A 1 351 ASP 351 379 379 ASP ASP A . n A 1 352 ALA 352 380 380 ALA ALA A . n A 1 353 GLN 353 381 381 GLN GLN A . n A 1 354 LEU 354 382 382 LEU LEU A . n A 1 355 ILE 355 383 383 ILE ILE A . n A 1 356 SER 356 384 384 SER SER A . n A 1 357 GLY 357 385 385 GLY GLY A . n A 1 358 ILE 358 386 386 ILE ILE A . n A 1 359 TYR 359 387 387 TYR TYR A . n A 1 360 ASP 360 388 388 ASP ASP A . n A 1 361 ARG 361 389 389 ARG ARG A . n A 1 362 ASN 362 390 390 ASN ASN A . n A 1 363 MET 363 391 391 MET MET A . n A 1 364 ALA 364 392 392 ALA ALA A . n A 1 365 VAL 365 393 393 VAL VAL A . n A 1 366 TRP 366 394 394 TRP TRP A . n A 1 367 TRP 367 395 395 TRP TRP A . n A 1 368 ASN 368 396 396 ASN ASN A . n A 1 369 TYR 369 397 397 TYR TYR A . n A 1 370 PRO 370 398 398 PRO PRO A . n A 1 371 VAL 371 399 399 VAL VAL A . n A 1 372 THR 372 400 400 THR THR A . n A 1 373 ASP 373 401 401 ASP ASP A . n A 1 374 TYR 374 402 402 TYR TYR A . n A 1 375 PHE 375 403 403 PHE PHE A . n A 1 376 LYS 376 404 404 LYS LYS A . n A 1 377 GLY 377 405 405 GLY GLY A . n A 1 378 LYS 378 406 406 LYS LYS A . n A 1 379 LEU 379 407 407 LEU LEU A . n A 1 380 ALA 380 408 408 ALA ALA A . n A 1 381 LEU 381 409 409 LEU LEU A . n A 1 382 GLY 382 410 410 GLY GLY A . n A 1 383 PRO 383 411 411 PRO PRO A . n A 1 384 MET 384 412 412 MET MET A . n A 1 385 HIS 385 413 413 HIS HIS A . n A 1 386 GLY 386 414 414 GLY GLY A . n A 1 387 LEU 387 415 415 LEU LEU A . n A 1 388 ASP 388 416 416 ASP ASP A . n A 1 389 LYS 389 417 417 LYS LYS A . n A 1 390 GLY 390 418 418 GLY GLY A . n A 1 391 LEU 391 419 419 LEU LEU A . n A 1 392 ASN 392 420 420 ASN ASN A . n A 1 393 GLN 393 421 421 GLN GLN A . n A 1 394 TYR 394 422 422 TYR TYR A . n A 1 395 VAL 395 423 423 VAL VAL A . n A 1 396 ASP 396 424 424 ASP ASP A . n A 1 397 PHE 397 425 425 PHE PHE A . n A 1 398 PHE 398 426 426 PHE PHE A . n A 1 399 THR 399 427 427 THR THR A . n A 1 400 VAL 400 428 428 VAL VAL A . n A 1 401 ASN 401 429 429 ASN ASN A . n A 1 402 PRO 402 430 430 PRO PRO A . n A 1 403 MET 403 431 431 MET MET A . n A 1 404 GLU 404 432 432 GLU GLU A . n A 1 405 HIS 405 433 433 HIS HIS A . n A 1 406 ALA 406 434 434 ALA ALA A . n A 1 407 GLU 407 435 435 GLU GLU A . n A 1 408 LEU 408 436 436 LEU LEU A . n A 1 409 SER 409 437 437 SER SER A . n A 1 410 LYS 410 438 438 LYS LYS A . n A 1 411 ILE 411 439 439 ILE ILE A . n A 1 412 SER 412 440 440 SER SER A . n A 1 413 ILE 413 441 441 ILE ILE A . n A 1 414 HIS 414 442 442 HIS HIS A . n A 1 415 THR 415 443 443 THR THR A . n A 1 416 ALA 416 444 444 ALA ALA A . n A 1 417 ALA 417 445 445 ALA ALA A . n A 1 418 ASP 418 446 446 ASP ASP A . n A 1 419 TYR 419 447 447 TYR TYR A . n A 1 420 SER 420 448 448 SER SER A . n A 1 421 TRP 421 449 449 TRP TRP A . n A 1 422 ASN 422 450 450 ASN ASN A . n A 1 423 MET 423 451 451 MET MET A . n A 1 424 ASP 424 452 452 ASP ASP A . n A 1 425 ASN 425 453 453 ASN ASN A . n A 1 426 TYR 426 454 454 TYR TYR A . n A 1 427 ASP 427 455 455 ASP ASP A . n A 1 428 TYR 428 456 456 TYR TYR A . n A 1 429 ASP 429 457 457 ASP ASP A . n A 1 430 LYS 430 458 458 LYS LYS A . n A 1 431 ALA 431 459 459 ALA ALA A . n A 1 432 TRP 432 460 460 TRP TRP A . n A 1 433 ASN 433 461 461 ASN ASN A . n A 1 434 ARG 434 462 462 ARG ARG A . n A 1 435 ALA 435 463 463 ALA ALA A . n A 1 436 ILE 436 464 464 ILE ILE A . n A 1 437 ASP 437 465 465 ASP ASP A . n A 1 438 MET 438 466 466 MET MET A . n A 1 439 LEU 439 467 467 LEU LEU A . n A 1 440 TYR 440 468 468 TYR TYR A . n A 1 441 GLY 441 469 469 GLY GLY A . n A 1 442 ASP 442 470 470 ASP ASP A . n A 1 443 LEU 443 471 471 LEU LEU A . n A 1 444 ALA 444 472 472 ALA ALA A . n A 1 445 GLU 445 473 473 GLU GLU A . n A 1 446 ASP 446 474 474 ASP ASP A . n A 1 447 MET 447 475 475 MET MET A . n A 1 448 LYS 448 476 476 LYS LYS A . n A 1 449 VAL 449 477 477 VAL VAL A . n A 1 450 PHE 450 478 478 PHE PHE A . n A 1 451 ALA 451 479 479 ALA ALA A . n A 1 452 ASN 452 480 480 ASN ASN A . n A 1 453 HIS 453 481 481 HIS HIS A . n A 1 454 SER 454 482 482 SER SER A . n A 1 455 THR 455 483 483 THR THR A . n A 1 456 ARG 456 484 484 ARG ARG A . n A 1 457 MET 457 485 485 MET MET A . n A 1 458 ASP 458 486 486 ASP ASP A . n A 1 459 ASN 459 487 487 ASN ASN A . n A 1 460 LYS 460 488 488 LYS LYS A . n A 1 461 THR 461 489 489 THR THR A . n A 1 462 TRP 462 490 490 TRP TRP A . n A 1 463 ALA 463 491 491 ALA ALA A . n A 1 464 LYS 464 492 492 LYS LYS A . n A 1 465 SER 465 493 493 SER SER A . n A 1 466 GLY 466 494 494 GLY GLY A . n A 1 467 ARG 467 495 495 ARG ARG A . n A 1 468 GLU 468 496 496 GLU GLU A . n A 1 469 ASP 469 497 497 ASP ASP A . n A 1 470 ALA 470 498 498 ALA ALA A . n A 1 471 PRO 471 499 499 PRO PRO A . n A 1 472 GLU 472 500 500 GLU GLU A . n A 1 473 LEU 473 501 501 LEU LEU A . n A 1 474 ARG 474 502 502 ARG ARG A . n A 1 475 ALA 475 503 503 ALA ALA A . n A 1 476 LYS 476 504 504 LYS LYS A . n A 1 477 MET 477 505 505 MET MET A . n A 1 478 ASP 478 506 506 ASP ASP A . n A 1 479 GLU 479 507 507 GLU GLU A . n A 1 480 LEU 480 508 508 LEU LEU A . n A 1 481 TRP 481 509 509 TRP TRP A . n A 1 482 ASN 482 510 510 ASN ASN A . n A 1 483 LYS 483 511 511 LYS LYS A . n A 1 484 LEU 484 512 512 LEU LEU A . n A 1 485 SER 485 513 513 SER SER A . n A 1 486 SER 486 514 514 SER SER A . n A 1 487 LYS 487 515 515 LYS LYS A . n A 1 488 GLU 488 516 516 GLU GLU A . n A 1 489 ASP 489 517 517 ASP ASP A . n A 1 490 ALA 490 518 518 ALA ALA A . n A 1 491 SER 491 519 519 SER SER A . n A 1 492 ALA 492 520 520 ALA ALA A . n A 1 493 LEU 493 521 521 LEU LEU A . n A 1 494 ILE 494 522 522 ILE ILE A . n A 1 495 GLU 495 523 523 GLU GLU A . n A 1 496 GLU 496 524 524 GLU GLU A . n A 1 497 LEU 497 525 525 LEU LEU A . n A 1 498 TYR 498 526 526 TYR TYR A . n A 1 499 GLY 499 527 527 GLY GLY A . n A 1 500 GLU 500 528 528 GLU GLU A . n A 1 501 PHE 501 529 529 PHE PHE A . n A 1 502 ALA 502 530 530 ALA ALA A . n A 1 503 ARG 503 531 531 ARG ARG A . n A 1 504 MET 504 532 532 MET MET A . n A 1 505 GLU 505 533 533 GLU GLU A . n A 1 506 GLU 506 534 534 GLU GLU A . n A 1 507 ALA 507 535 535 ALA ALA A . n A 1 508 CYS 508 536 536 CYS CYS A . n A 1 509 ASN 509 537 537 ASN ASN A . n A 1 510 ASN 510 538 538 ASN ASN A . n A 1 511 LEU 511 539 539 LEU LEU A . n A 1 512 LYS 512 540 540 LYS LYS A . n A 1 513 ALA 513 541 541 ALA ALA A . n A 1 514 ASN 514 542 542 ASN ASN A . n A 1 515 LEU 515 543 543 LEU LEU A . n A 1 516 PRO 516 544 544 PRO PRO A . n A 1 517 GLU 517 545 545 GLU GLU A . n A 1 518 VAL 518 546 546 VAL VAL A . n A 1 519 ALA 519 547 547 ALA ALA A . n A 1 520 LEU 520 548 548 LEU LEU A . n A 1 521 GLU 521 549 549 GLU GLU A . n A 1 522 GLU 522 550 550 GLU GLU A . n A 1 523 CYS 523 551 551 CYS CYS A . n A 1 524 SER 524 552 552 SER SER A . n A 1 525 ARG 525 553 553 ARG ARG A . n A 1 526 GLN 526 554 554 GLN GLN A . n A 1 527 LEU 527 555 555 LEU LEU A . n A 1 528 ASP 528 556 556 ASP ASP A . n A 1 529 GLU 529 557 557 GLU GLU A . n A 1 530 LEU 530 558 558 LEU LEU A . n A 1 531 ILE 531 559 559 ILE ILE A . n A 1 532 THR 532 560 560 THR THR A . n A 1 533 LEU 533 561 561 LEU LEU A . n A 1 534 ALA 534 562 562 ALA ALA A . n A 1 535 GLN 535 563 563 GLN GLN A . n A 1 536 GLY 536 564 564 GLY GLY A . n A 1 537 ASP 537 565 565 ASP ASP A . n A 1 538 LYS 538 566 566 LYS LYS A . n A 1 539 ALA 539 567 567 ALA ALA A . n A 1 540 SER 540 568 568 SER SER A . n A 1 541 LEU 541 569 569 LEU LEU A . n A 1 542 ASP 542 570 570 ASP ASP A . n A 1 543 MET 543 571 571 MET MET A . n A 1 544 ILE 544 572 572 ILE ILE A . n A 1 545 VAL 545 573 573 VAL VAL A . n A 1 546 ALA 546 574 574 ALA ALA A . n A 1 547 GLN 547 575 575 GLN GLN A . n A 1 548 LEU 548 576 576 LEU LEU A . n A 1 549 ASN 549 577 577 ASN ASN A . n A 1 550 GLU 550 578 578 GLU GLU A . n A 1 551 ASP 551 579 579 ASP ASP A . n A 1 552 THR 552 580 580 THR THR A . n A 1 553 GLU 553 581 581 GLU GLU A . n A 1 554 ALA 554 582 582 ALA ALA A . n A 1 555 TYR 555 583 583 TYR TYR A . n A 1 556 GLU 556 584 584 GLU GLU A . n A 1 557 SER 557 585 585 SER SER A . n A 1 558 ALA 558 586 586 ALA ALA A . n A 1 559 LYS 559 587 587 LYS LYS A . n A 1 560 GLU 560 588 588 GLU GLU A . n A 1 561 ILE 561 589 589 ILE ILE A . n A 1 562 ALA 562 590 590 ALA ALA A . n A 1 563 GLN 563 591 591 GLN GLN A . n A 1 564 ASN 564 592 592 ASN ASN A . n A 1 565 LYS 565 593 593 LYS LYS A . n A 1 566 LEU 566 594 594 LEU LEU A . n A 1 567 ASN 567 595 595 ASN ASN A . n A 1 568 THR 568 596 596 THR THR A . n A 1 569 ALA 569 597 597 ALA ALA A . n A 1 570 LEU 570 598 598 LEU LEU A . n A 1 571 SER 571 599 599 SER SER A . n A 1 572 SER 572 600 600 SER SER A . n A 1 573 PHE 573 601 601 PHE PHE A . n A 1 574 ALA 574 602 602 ALA ALA A . n A 1 575 VAL 575 603 603 VAL VAL A . n A 1 576 ILE 576 604 604 ILE ILE A . n A 1 577 SER 577 605 605 SER SER A . n A 1 578 GLU 578 606 606 GLU GLU A . n A 1 579 LYS 579 607 607 LYS LYS A . n A 1 580 VAL 580 608 608 VAL VAL A . n A 1 581 ALA 581 609 609 ALA ALA A . n A 1 582 GLN 582 610 610 GLN GLN A . n A 1 583 SER 583 611 611 SER SER A . n A 1 584 PHE 584 612 612 PHE PHE A . n A 1 585 ILE 585 613 613 ILE ILE A . n A 1 586 GLN 586 614 614 GLN GLN A . n A 1 587 GLU 587 615 615 GLU GLU A . n A 1 588 ALA 588 616 616 ALA ALA A . n A 1 589 LEU 589 617 617 LEU LEU A . n A 1 590 SER 590 618 618 SER SER A . n B 2 1 GLN 1 144 ? ? ? P . n B 2 2 LEU 2 145 145 LEU LEU P . n B 2 3 TRP 3 146 146 TRP TRP P . n B 2 4 VAL 4 147 147 VAL VAL P . n B 2 5 ASP 5 148 148 ASP ASP P . n B 2 6 SER 6 149 149 SER SER P . n B 2 7 THR 7 150 150 THR THR P . n B 2 8 PRO 8 151 151 PRO PRO P . n B 2 9 PRO 9 152 152 PRO PRO P . n B 2 10 PRO 10 153 ? ? ? P . n B 2 11 GLY 11 154 ? ? ? P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CD 1 1620 1620 CD CD A . D 3 CD 1 1621 1621 CD CD A . E 3 CD 1 1622 1622 CD CD A . F 3 CD 1 1623 1623 CD CD A . G 3 CD 1 1624 1624 CD CD A . H 3 CD 1 1625 1625 CD CD A . I 3 CD 1 1626 1626 CD CD A . J 3 CD 1 1627 1627 CD CD A . K 3 CD 1 1628 1628 CD CD A . L 3 CD 1 1629 1629 CD CD A . M 3 CD 1 1630 1630 CD CD A . N 3 CD 1 1631 1631 CD CD A . O 3 CD 1 1632 1632 CD CD A . P 3 CD 1 1633 1633 CD CD A . Q 3 CD 1 1634 1634 CD CD A . R 3 CD 1 1635 1635 CD CD A . S 3 CD 1 1636 1636 CD CD A . T 3 CD 1 1637 1637 CD CD A . U 4 NAG 1 1153 1153 NAG NAG P . V 5 HOH 1 2001 2001 HOH HOH A . V 5 HOH 2 2002 2002 HOH HOH A . V 5 HOH 3 2003 2003 HOH HOH A . V 5 HOH 4 2004 2004 HOH HOH A . V 5 HOH 5 2005 2005 HOH HOH A . V 5 HOH 6 2006 2006 HOH HOH A . V 5 HOH 7 2007 2007 HOH HOH A . V 5 HOH 8 2008 2008 HOH HOH A . V 5 HOH 9 2009 2009 HOH HOH A . V 5 HOH 10 2010 2010 HOH HOH A . V 5 HOH 11 2011 2011 HOH HOH A . V 5 HOH 12 2012 2012 HOH HOH A . V 5 HOH 13 2013 2013 HOH HOH A . V 5 HOH 14 2014 2014 HOH HOH A . V 5 HOH 15 2015 2015 HOH HOH A . V 5 HOH 16 2016 2016 HOH HOH A . V 5 HOH 17 2017 2017 HOH HOH A . V 5 HOH 18 2018 2018 HOH HOH A . V 5 HOH 19 2019 2019 HOH HOH A . V 5 HOH 20 2020 2020 HOH HOH A . V 5 HOH 21 2021 2021 HOH HOH A . V 5 HOH 22 2022 2022 HOH HOH A . V 5 HOH 23 2023 2023 HOH HOH A . V 5 HOH 24 2024 2024 HOH HOH A . V 5 HOH 25 2025 2025 HOH HOH A . V 5 HOH 26 2026 2026 HOH HOH A . V 5 HOH 27 2027 2027 HOH HOH A . V 5 HOH 28 2028 2028 HOH HOH A . V 5 HOH 29 2029 2029 HOH HOH A . V 5 HOH 30 2030 2030 HOH HOH A . V 5 HOH 31 2031 2031 HOH HOH A . V 5 HOH 32 2032 2032 HOH HOH A . V 5 HOH 33 2033 2033 HOH HOH A . V 5 HOH 34 2034 2034 HOH HOH A . V 5 HOH 35 2035 2035 HOH HOH A . V 5 HOH 36 2036 2036 HOH HOH A . V 5 HOH 37 2037 2037 HOH HOH A . V 5 HOH 38 2038 2038 HOH HOH A . V 5 HOH 39 2039 2039 HOH HOH A . V 5 HOH 40 2040 2040 HOH HOH A . V 5 HOH 41 2041 2041 HOH HOH A . V 5 HOH 42 2042 2042 HOH HOH A . V 5 HOH 43 2043 2043 HOH HOH A . V 5 HOH 44 2044 2044 HOH HOH A . V 5 HOH 45 2045 2045 HOH HOH A . V 5 HOH 46 2046 2046 HOH HOH A . V 5 HOH 47 2047 2047 HOH HOH A . V 5 HOH 48 2048 2048 HOH HOH A . V 5 HOH 49 2049 2049 HOH HOH A . V 5 HOH 50 2050 2050 HOH HOH A . V 5 HOH 51 2051 2051 HOH HOH A . V 5 HOH 52 2052 2052 HOH HOH A . V 5 HOH 53 2053 2053 HOH HOH A . V 5 HOH 54 2054 2054 HOH HOH A . V 5 HOH 55 2055 2055 HOH HOH A . V 5 HOH 56 2056 2056 HOH HOH A . V 5 HOH 57 2057 2057 HOH HOH A . V 5 HOH 58 2058 2058 HOH HOH A . V 5 HOH 59 2059 2059 HOH HOH A . V 5 HOH 60 2060 2060 HOH HOH A . V 5 HOH 61 2061 2061 HOH HOH A . V 5 HOH 62 2062 2062 HOH HOH A . V 5 HOH 63 2063 2063 HOH HOH A . V 5 HOH 64 2064 2064 HOH HOH A . V 5 HOH 65 2065 2065 HOH HOH A . V 5 HOH 66 2066 2066 HOH HOH A . V 5 HOH 67 2067 2067 HOH HOH A . V 5 HOH 68 2068 2068 HOH HOH A . V 5 HOH 69 2069 2069 HOH HOH A . V 5 HOH 70 2070 2070 HOH HOH A . V 5 HOH 71 2071 2071 HOH HOH A . V 5 HOH 72 2072 2072 HOH HOH A . V 5 HOH 73 2073 2073 HOH HOH A . V 5 HOH 74 2074 2074 HOH HOH A . V 5 HOH 75 2075 2075 HOH HOH A . V 5 HOH 76 2076 2076 HOH HOH A . V 5 HOH 77 2077 2077 HOH HOH A . V 5 HOH 78 2078 2078 HOH HOH A . V 5 HOH 79 2079 2079 HOH HOH A . V 5 HOH 80 2080 2080 HOH HOH A . V 5 HOH 81 2081 2081 HOH HOH A . V 5 HOH 82 2082 2082 HOH HOH A . V 5 HOH 83 2083 2083 HOH HOH A . V 5 HOH 84 2084 2084 HOH HOH A . V 5 HOH 85 2085 2085 HOH HOH A . V 5 HOH 86 2086 2086 HOH HOH A . V 5 HOH 87 2087 2087 HOH HOH A . V 5 HOH 88 2088 2088 HOH HOH A . V 5 HOH 89 2089 2089 HOH HOH A . V 5 HOH 90 2090 2090 HOH HOH A . V 5 HOH 91 2091 2091 HOH HOH A . V 5 HOH 92 2092 2092 HOH HOH A . V 5 HOH 93 2093 2093 HOH HOH A . V 5 HOH 94 2094 2094 HOH HOH A . V 5 HOH 95 2095 2095 HOH HOH A . V 5 HOH 96 2096 2096 HOH HOH A . V 5 HOH 97 2097 2097 HOH HOH A . V 5 HOH 98 2098 2098 HOH HOH A . V 5 HOH 99 2099 2099 HOH HOH A . V 5 HOH 100 2100 2100 HOH HOH A . V 5 HOH 101 2101 2101 HOH HOH A . V 5 HOH 102 2102 2102 HOH HOH A . V 5 HOH 103 2103 2103 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id SER _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id SER _pdbx_struct_mod_residue.auth_seq_id 149 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id SER _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1200 ? 1 MORE -7.1 ? 1 'SSA (A^2)' 29610 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 23 ? A GLU 51 ? 1_555 CD ? O CD . ? A CD 1632 ? 1_555 OE2 ? A GLU 23 ? A GLU 51 ? 1_555 56.7 ? 2 OE1 ? A GLU 23 ? A GLU 51 ? 1_555 CD ? O CD . ? A CD 1632 ? 1_555 OD1 ? A ASN 422 ? A ASN 450 ? 1_555 80.4 ? 3 OE2 ? A GLU 23 ? A GLU 51 ? 1_555 CD ? O CD . ? A CD 1632 ? 1_555 OD1 ? A ASN 422 ? A ASN 450 ? 1_555 93.3 ? 4 OE1 ? A GLU 23 ? A GLU 51 ? 1_555 CD ? O CD . ? A CD 1632 ? 1_555 OD1 ? A ASP 424 ? A ASP 452 ? 1_555 146.5 ? 5 OE2 ? A GLU 23 ? A GLU 51 ? 1_555 CD ? O CD . ? A CD 1632 ? 1_555 OD1 ? A ASP 424 ? A ASP 452 ? 1_555 155.2 ? 6 OD1 ? A ASN 422 ? A ASN 450 ? 1_555 CD ? O CD . ? A CD 1632 ? 1_555 OD1 ? A ASP 424 ? A ASP 452 ? 1_555 85.5 ? 7 OE1 ? A GLU 26 ? A GLU 54 ? 5_554 CD ? R CD . ? A CD 1635 ? 1_555 OD2 ? A ASP 238 ? A ASP 266 ? 1_555 75.8 ? 8 OE1 ? A GLU 26 ? A GLU 54 ? 5_554 CD ? R CD . ? A CD 1635 ? 1_555 NZ ? A LYS 278 ? A LYS 306 ? 1_555 105.0 ? 9 OD2 ? A ASP 238 ? A ASP 266 ? 1_555 CD ? R CD . ? A CD 1635 ? 1_555 NZ ? A LYS 278 ? A LYS 306 ? 1_555 78.2 ? 10 OD2 ? A ASP 30 ? A ASP 58 ? 1_555 CD ? Q CD . ? A CD 1634 ? 1_555 OD1 ? A ASP 30 ? A ASP 58 ? 1_555 51.0 ? 11 OD2 ? A ASP 30 ? A ASP 58 ? 1_555 CD ? Q CD . ? A CD 1634 ? 1_555 OE2 ? A GLU 244 ? A GLU 272 ? 6_555 131.1 ? 12 OD1 ? A ASP 30 ? A ASP 58 ? 1_555 CD ? Q CD . ? A CD 1634 ? 1_555 OE2 ? A GLU 244 ? A GLU 272 ? 6_555 86.0 ? 13 OD2 ? A ASP 30 ? A ASP 58 ? 1_555 CD ? Q CD . ? A CD 1634 ? 1_555 OE1 ? A GLU 244 ? A GLU 272 ? 6_555 97.6 ? 14 OD1 ? A ASP 30 ? A ASP 58 ? 1_555 CD ? Q CD . ? A CD 1634 ? 1_555 OE1 ? A GLU 244 ? A GLU 272 ? 6_555 90.4 ? 15 OE2 ? A GLU 244 ? A GLU 272 ? 6_555 CD ? Q CD . ? A CD 1634 ? 1_555 OE1 ? A GLU 244 ? A GLU 272 ? 6_555 55.5 ? 16 OD2 ? A ASP 30 ? A ASP 58 ? 1_555 CD ? Q CD . ? A CD 1634 ? 1_555 O ? V HOH . ? A HOH 2006 ? 1_555 82.4 ? 17 OD1 ? A ASP 30 ? A ASP 58 ? 1_555 CD ? Q CD . ? A CD 1634 ? 1_555 O ? V HOH . ? A HOH 2006 ? 1_555 132.1 ? 18 OE2 ? A GLU 244 ? A GLU 272 ? 6_555 CD ? Q CD . ? A CD 1634 ? 1_555 O ? V HOH . ? A HOH 2006 ? 1_555 127.4 ? 19 OE1 ? A GLU 244 ? A GLU 272 ? 6_555 CD ? Q CD . ? A CD 1634 ? 1_555 O ? V HOH . ? A HOH 2006 ? 1_555 85.2 ? 20 O ? A LEU 40 ? A LEU 68 ? 1_555 CD ? C CD . ? A CD 1620 ? 1_555 OE1 ? A GLU 43 ? A GLU 71 ? 1_555 94.5 ? 21 O ? A LEU 40 ? A LEU 68 ? 1_555 CD ? C CD . ? A CD 1620 ? 1_555 OE2 ? A GLU 43 ? A GLU 71 ? 1_555 115.2 ? 22 OE1 ? A GLU 43 ? A GLU 71 ? 1_555 CD ? C CD . ? A CD 1620 ? 1_555 OE2 ? A GLU 43 ? A GLU 71 ? 1_555 46.4 ? 23 O ? A LEU 40 ? A LEU 68 ? 1_555 CD ? C CD . ? A CD 1620 ? 1_555 O ? V HOH . ? A HOH 2008 ? 1_555 103.3 ? 24 OE1 ? A GLU 43 ? A GLU 71 ? 1_555 CD ? C CD . ? A CD 1620 ? 1_555 O ? V HOH . ? A HOH 2008 ? 1_555 71.4 ? 25 OE2 ? A GLU 43 ? A GLU 71 ? 1_555 CD ? C CD . ? A CD 1620 ? 1_555 O ? V HOH . ? A HOH 2008 ? 1_555 106.1 ? 26 O ? A GLU 45 ? A GLU 73 ? 1_555 CD ? D CD . ? A CD 1621 ? 1_555 OE1 ? A GLU 80 ? A GLU 108 ? 1_555 99.6 ? 27 O ? A GLU 45 ? A GLU 73 ? 1_555 CD ? D CD . ? A CD 1621 ? 1_555 OD1 ? A ASP 83 ? A ASP 111 ? 1_555 105.1 ? 28 OE1 ? A GLU 80 ? A GLU 108 ? 1_555 CD ? D CD . ? A CD 1621 ? 1_555 OD1 ? A ASP 83 ? A ASP 111 ? 1_555 95.3 ? 29 O ? A GLU 45 ? A GLU 73 ? 1_555 CD ? D CD . ? A CD 1621 ? 1_555 OD2 ? A ASP 83 ? A ASP 111 ? 1_555 67.4 ? 30 OE1 ? A GLU 80 ? A GLU 108 ? 1_555 CD ? D CD . ? A CD 1621 ? 1_555 OD2 ? A ASP 83 ? A ASP 111 ? 1_555 72.9 ? 31 OD1 ? A ASP 83 ? A ASP 111 ? 1_555 CD ? D CD . ? A CD 1621 ? 1_555 OD2 ? A ASP 83 ? A ASP 111 ? 1_555 48.6 ? 32 OD2 ? A ASP 84 ? A ASP 112 ? 1_555 CD ? E CD . ? A CD 1622 ? 1_555 OE2 ? A GLU 522 ? A GLU 550 ? 2_545 109.1 ? 33 OD1 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OD2 ? A ASP 89 ? A ASP 117 ? 1_555 47.9 ? 34 OD1 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE1 ? A GLU 117 ? A GLU 145 ? 1_555 114.2 ? 35 OD2 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE1 ? A GLU 117 ? A GLU 145 ? 1_555 141.8 ? 36 OD1 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE2 ? A GLU 117 ? A GLU 145 ? 1_555 98.5 ? 37 OD2 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE2 ? A GLU 117 ? A GLU 145 ? 1_555 146.4 ? 38 OE1 ? A GLU 117 ? A GLU 145 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE2 ? A GLU 117 ? A GLU 145 ? 1_555 43.7 ? 39 OD1 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE1 ? A GLU 517 ? A GLU 545 ? 2_545 125.8 ? 40 OD2 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE1 ? A GLU 517 ? A GLU 545 ? 2_545 92.0 ? 41 OE1 ? A GLU 117 ? A GLU 145 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE1 ? A GLU 517 ? A GLU 545 ? 2_545 118.8 ? 42 OE2 ? A GLU 117 ? A GLU 145 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE1 ? A GLU 517 ? A GLU 545 ? 2_545 111.7 ? 43 OD1 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE2 ? A GLU 517 ? A GLU 545 ? 2_545 77.7 ? 44 OD2 ? A ASP 89 ? A ASP 117 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE2 ? A GLU 517 ? A GLU 545 ? 2_545 70.0 ? 45 OE1 ? A GLU 117 ? A GLU 145 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE2 ? A GLU 517 ? A GLU 545 ? 2_545 146.6 ? 46 OE2 ? A GLU 117 ? A GLU 145 ? 1_555 CD ? F CD . ? A CD 1623 ? 1_555 OE2 ? A GLU 517 ? A GLU 545 ? 2_545 105.6 ? 47 OE1 ? A GLU 517 ? A GLU 545 ? 2_545 CD ? F CD . ? A CD 1623 ? 1_555 OE2 ? A GLU 517 ? A GLU 545 ? 2_545 51.8 ? 48 OD2 ? A ASP 111 ? A ASP 139 ? 1_555 CD ? G CD . ? A CD 1624 ? 1_555 OD1 ? A ASP 111 ? A ASP 139 ? 1_555 49.3 ? 49 OD2 ? A ASP 111 ? A ASP 139 ? 1_555 CD ? G CD . ? A CD 1624 ? 1_555 OD1 ? A ASP 240 ? A ASP 268 ? 6_555 158.3 ? 50 OD1 ? A ASP 111 ? A ASP 139 ? 1_555 CD ? G CD . ? A CD 1624 ? 1_555 OD1 ? A ASP 240 ? A ASP 268 ? 6_555 120.4 ? 51 OD2 ? A ASP 111 ? A ASP 139 ? 1_555 CD ? G CD . ? A CD 1624 ? 1_555 OD2 ? A ASP 240 ? A ASP 268 ? 6_555 120.0 ? 52 OD1 ? A ASP 111 ? A ASP 139 ? 1_555 CD ? G CD . ? A CD 1624 ? 1_555 OD2 ? A ASP 240 ? A ASP 268 ? 6_555 76.5 ? 53 OD1 ? A ASP 240 ? A ASP 268 ? 6_555 CD ? G CD . ? A CD 1624 ? 1_555 OD2 ? A ASP 240 ? A ASP 268 ? 6_555 44.1 ? 54 OE1 ? A GLU 142 ? A GLU 170 ? 1_555 CD ? I CD . ? A CD 1626 ? 1_555 OE2 ? A GLU 142 ? A GLU 170 ? 1_555 53.4 ? 55 OE1 ? A GLU 142 ? A GLU 170 ? 1_555 CD ? I CD . ? A CD 1626 ? 1_555 O ? V HOH . ? A HOH 2005 ? 1_555 109.9 ? 56 OE2 ? A GLU 142 ? A GLU 170 ? 1_555 CD ? I CD . ? A CD 1626 ? 1_555 O ? V HOH . ? A HOH 2005 ? 1_555 150.1 ? 57 OE2 ? A GLU 244 ? A GLU 272 ? 1_555 CD ? J CD . ? A CD 1627 ? 1_555 NE2 ? A HIS 248 ? A HIS 276 ? 1_555 114.8 ? 58 OE2 ? A GLU 244 ? A GLU 272 ? 1_555 CD ? J CD . ? A CD 1627 ? 1_555 O ? V HOH . ? A HOH 2046 ? 1_555 65.6 ? 59 NE2 ? A HIS 248 ? A HIS 276 ? 1_555 CD ? J CD . ? A CD 1627 ? 1_555 O ? V HOH . ? A HOH 2046 ? 1_555 100.1 ? 60 OE2 ? A GLU 244 ? A GLU 272 ? 1_555 CD ? J CD . ? A CD 1627 ? 1_555 O ? V HOH . ? A HOH 2047 ? 1_555 121.6 ? 61 NE2 ? A HIS 248 ? A HIS 276 ? 1_555 CD ? J CD . ? A CD 1627 ? 1_555 O ? V HOH . ? A HOH 2047 ? 1_555 95.5 ? 62 O ? V HOH . ? A HOH 2046 ? 1_555 CD ? J CD . ? A CD 1627 ? 1_555 O ? V HOH . ? A HOH 2047 ? 1_555 157.5 ? 63 OE2 ? A GLU 254 ? A GLU 282 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OD2 ? A ASP 258 ? A ASP 286 ? 1_555 98.2 ? 64 OE2 ? A GLU 254 ? A GLU 282 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OD1 ? A ASP 258 ? A ASP 286 ? 1_555 83.5 ? 65 OD2 ? A ASP 258 ? A ASP 286 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OD1 ? A ASP 258 ? A ASP 286 ? 1_555 51.8 ? 66 OE2 ? A GLU 254 ? A GLU 282 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OE1 ? A GLU 560 ? A GLU 588 ? 2_545 89.3 ? 67 OD2 ? A ASP 258 ? A ASP 286 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OE1 ? A GLU 560 ? A GLU 588 ? 2_545 163.0 ? 68 OD1 ? A ASP 258 ? A ASP 286 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OE1 ? A GLU 560 ? A GLU 588 ? 2_545 144.9 ? 69 OE2 ? A GLU 254 ? A GLU 282 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OE2 ? A GLU 560 ? A GLU 588 ? 2_545 82.2 ? 70 OD2 ? A ASP 258 ? A ASP 286 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OE2 ? A GLU 560 ? A GLU 588 ? 2_545 141.9 ? 71 OD1 ? A ASP 258 ? A ASP 286 ? 1_555 CD ? K CD . ? A CD 1628 ? 1_555 OE2 ? A GLU 560 ? A GLU 588 ? 2_545 90.8 ? 72 OE1 ? A GLU 560 ? A GLU 588 ? 2_545 CD ? K CD . ? A CD 1628 ? 1_555 OE2 ? A GLU 560 ? A GLU 588 ? 2_545 54.1 ? 73 OE1 ? A GLU 334 ? A GLU 362 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 OE2 ? A GLU 334 ? A GLU 362 ? 1_555 52.8 ? 74 OE1 ? A GLU 334 ? A GLU 362 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 OD1 ? A ASP 396 ? A ASP 424 ? 1_555 81.2 ? 75 OE2 ? A GLU 334 ? A GLU 362 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 OD1 ? A ASP 396 ? A ASP 424 ? 1_555 125.9 ? 76 OE1 ? A GLU 334 ? A GLU 362 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 OD2 ? A ASP 396 ? A ASP 424 ? 1_555 131.5 ? 77 OE2 ? A GLU 334 ? A GLU 362 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 OD2 ? A ASP 396 ? A ASP 424 ? 1_555 146.0 ? 78 OD1 ? A ASP 396 ? A ASP 424 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 OD2 ? A ASP 396 ? A ASP 424 ? 1_555 51.8 ? 79 OE1 ? A GLU 334 ? A GLU 362 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 O ? V HOH . ? A HOH 2062 ? 1_555 73.3 ? 80 OE2 ? A GLU 334 ? A GLU 362 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 O ? V HOH . ? A HOH 2062 ? 1_555 87.2 ? 81 OD1 ? A ASP 396 ? A ASP 424 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 O ? V HOH . ? A HOH 2062 ? 1_555 107.0 ? 82 OD2 ? A ASP 396 ? A ASP 424 ? 1_555 CD ? L CD . ? A CD 1629 ? 1_555 O ? V HOH . ? A HOH 2062 ? 1_555 126.7 ? 83 O ? A LYS 376 ? A LYS 404 ? 1_555 CD ? N CD . ? A CD 1631 ? 1_555 NE2 ? A HIS 405 ? A HIS 433 ? 1_555 157.4 ? 84 O ? A LYS 376 ? A LYS 404 ? 1_555 CD ? N CD . ? A CD 1631 ? 1_555 O ? V HOH . ? A HOH 2096 ? 1_555 78.9 ? 85 NE2 ? A HIS 405 ? A HIS 433 ? 1_555 CD ? N CD . ? A CD 1631 ? 1_555 O ? V HOH . ? A HOH 2096 ? 1_555 94.6 ? 86 OD2 ? A ASP 446 ? A ASP 474 ? 1_555 CD ? S CD . ? A CD 1636 ? 1_555 OD1 ? A ASP 446 ? A ASP 474 ? 1_555 51.9 ? 87 OD2 ? A ASP 446 ? A ASP 474 ? 1_555 CD ? S CD . ? A CD 1636 ? 1_555 OE1 ? A GLU 506 ? A GLU 534 ? 1_555 106.3 ? 88 OD1 ? A ASP 446 ? A ASP 474 ? 1_555 CD ? S CD . ? A CD 1636 ? 1_555 OE1 ? A GLU 506 ? A GLU 534 ? 1_555 88.1 ? 89 OD2 ? A ASP 446 ? A ASP 474 ? 1_555 CD ? S CD . ? A CD 1636 ? 1_555 OE2 ? A GLU 506 ? A GLU 534 ? 1_555 116.6 ? 90 OD1 ? A ASP 446 ? A ASP 474 ? 1_555 CD ? S CD . ? A CD 1636 ? 1_555 OE2 ? A GLU 506 ? A GLU 534 ? 1_555 128.0 ? 91 OE1 ? A GLU 506 ? A GLU 534 ? 1_555 CD ? S CD . ? A CD 1636 ? 1_555 OE2 ? A GLU 506 ? A GLU 534 ? 1_555 42.6 ? 92 OE2 ? A GLU 517 ? A GLU 545 ? 2_545 CD ? T CD . ? A CD 1637 ? 1_555 OE2 ? A GLU 521 ? A GLU 549 ? 2_545 104.4 ? 93 OE2 ? A GLU 517 ? A GLU 545 ? 2_545 CD ? T CD . ? A CD 1637 ? 1_555 OE1 ? A GLU 521 ? A GLU 549 ? 2_545 63.3 ? 94 OE2 ? A GLU 521 ? A GLU 549 ? 2_545 CD ? T CD . ? A CD 1637 ? 1_555 OE1 ? A GLU 521 ? A GLU 549 ? 2_545 52.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-14 2 'Structure model' 1 1 2020-07-29 3 'Structure model' 1 2 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' Other 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Refinement description' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_entity_nonpoly 6 2 'Structure model' pdbx_struct_conn_angle 7 2 'Structure model' struct_conn 8 2 'Structure model' struct_conn_type 9 2 'Structure model' struct_site 10 2 'Structure model' struct_site_gen 11 3 'Structure model' chem_comp 12 3 'Structure model' chem_comp_atom 13 3 'Structure model' chem_comp_bond 14 3 'Structure model' database_2 15 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.name' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_entity.pdbx_description' 4 2 'Structure model' '_pdbx_database_status.status_code_sf' 5 2 'Structure model' '_pdbx_entity_nonpoly.name' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 22 2 'Structure model' '_pdbx_struct_conn_angle.value' 23 2 'Structure model' '_struct_conn.conn_type_id' 24 2 'Structure model' '_struct_conn.id' 25 2 'Structure model' '_struct_conn.pdbx_dist_value' 26 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 27 2 'Structure model' '_struct_conn.pdbx_role' 28 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 29 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 30 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 31 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 32 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 33 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 34 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 35 2 'Structure model' '_struct_conn.ptnr1_symmetry' 36 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 37 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 38 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 39 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 40 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 41 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 42 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 43 2 'Structure model' '_struct_conn.ptnr2_symmetry' 44 2 'Structure model' '_struct_conn_type.id' 45 3 'Structure model' '_chem_comp.pdbx_synonyms' 46 3 'Structure model' '_database_2.pdbx_DOI' 47 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0088 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AC" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. ; # _pdbx_entry_details.entry_id 2YDR _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, ASP 298 TO ASN' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ALA 602 ? ? O A HOH 2101 ? ? 2.12 2 1 O A ALA 597 ? ? O A HOH 2101 ? ? 2.15 3 1 O A VAL 109 ? ? O A HOH 2015 ? ? 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 131 ? ? 83.88 -2.31 2 1 SER A 166 ? ? 78.86 -14.16 3 1 ALA A 216 ? ? -150.61 42.89 4 1 ARG A 224 ? ? -135.34 -76.89 5 1 ASP A 262 ? ? -159.18 8.96 6 1 PHE A 318 ? ? -125.37 -63.71 7 1 ASP A 388 ? ? 38.65 45.88 8 1 PHE A 403 ? ? -168.15 76.68 9 1 GLU A 432 ? ? -59.54 -9.65 10 1 LYS A 488 ? ? 81.81 -13.25 11 1 THR A 489 ? ? -119.53 -102.60 12 1 ALA A 498 ? ? 10.74 73.28 13 1 SER A 514 ? ? -96.82 41.47 14 1 LYS A 515 ? ? 15.43 60.04 15 1 GLU A 578 ? ? 37.37 34.45 16 1 VAL A 608 ? ? -121.08 -89.75 17 1 LEU A 617 ? ? -100.80 65.61 18 1 TRP P 146 ? ? 84.52 86.71 19 1 SER P 149 ? ? -95.91 42.32 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 115 ? CG ? A GLU 87 CG 2 1 Y 1 A GLU 115 ? CD ? A GLU 87 CD 3 1 Y 1 A GLU 115 ? OE1 ? A GLU 87 OE1 4 1 Y 1 A GLU 115 ? OE2 ? A GLU 87 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 29 ? A GLY 1 2 1 Y 1 A SER 30 ? A SER 2 3 1 Y 1 A VAL 31 ? A VAL 3 4 1 Y 1 A GLY 32 ? A GLY 4 5 1 Y 1 A PRO 33 ? A PRO 5 6 1 Y 1 A LYS 34 ? A LYS 6 7 1 Y 1 A THR 35 ? A THR 7 8 1 Y 1 A GLY 36 ? A GLY 8 9 1 Y 1 A GLU 37 ? A GLU 9 10 1 Y 1 A GLU 38 ? A GLU 10 11 1 Y 1 A ASN 39 ? A ASN 11 12 1 Y 1 P GLN 144 ? B GLN 1 13 1 Y 1 P PRO 153 ? B PRO 10 14 1 Y 1 P GLY 154 ? B GLY 11 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CD CD CD N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 NAG C1 C N R 251 NAG C2 C N R 252 NAG C3 C N R 253 NAG C4 C N S 254 NAG C5 C N R 255 NAG C6 C N N 256 NAG C7 C N N 257 NAG C8 C N N 258 NAG N2 N N N 259 NAG O1 O N N 260 NAG O3 O N N 261 NAG O4 O N N 262 NAG O5 O N N 263 NAG O6 O N N 264 NAG O7 O N N 265 NAG H1 H N N 266 NAG H2 H N N 267 NAG H3 H N N 268 NAG H4 H N N 269 NAG H5 H N N 270 NAG H61 H N N 271 NAG H62 H N N 272 NAG H81 H N N 273 NAG H82 H N N 274 NAG H83 H N N 275 NAG HN2 H N N 276 NAG HO1 H N N 277 NAG HO3 H N N 278 NAG HO4 H N N 279 NAG HO6 H N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 PRO N N N N 304 PRO CA C N S 305 PRO C C N N 306 PRO O O N N 307 PRO CB C N N 308 PRO CG C N N 309 PRO CD C N N 310 PRO OXT O N N 311 PRO H H N N 312 PRO HA H N N 313 PRO HB2 H N N 314 PRO HB3 H N N 315 PRO HG2 H N N 316 PRO HG3 H N N 317 PRO HD2 H N N 318 PRO HD3 H N N 319 PRO HXT H N N 320 SER N N N N 321 SER CA C N S 322 SER C C N N 323 SER O O N N 324 SER CB C N N 325 SER OG O N N 326 SER OXT O N N 327 SER H H N N 328 SER H2 H N N 329 SER HA H N N 330 SER HB2 H N N 331 SER HB3 H N N 332 SER HG H N N 333 SER HXT H N N 334 THR N N N N 335 THR CA C N S 336 THR C C N N 337 THR O O N N 338 THR CB C N R 339 THR OG1 O N N 340 THR CG2 C N N 341 THR OXT O N N 342 THR H H N N 343 THR H2 H N N 344 THR HA H N N 345 THR HB H N N 346 THR HG1 H N N 347 THR HG21 H N N 348 THR HG22 H N N 349 THR HG23 H N N 350 THR HXT H N N 351 TRP N N N N 352 TRP CA C N S 353 TRP C C N N 354 TRP O O N N 355 TRP CB C N N 356 TRP CG C Y N 357 TRP CD1 C Y N 358 TRP CD2 C Y N 359 TRP NE1 N Y N 360 TRP CE2 C Y N 361 TRP CE3 C Y N 362 TRP CZ2 C Y N 363 TRP CZ3 C Y N 364 TRP CH2 C Y N 365 TRP OXT O N N 366 TRP H H N N 367 TRP H2 H N N 368 TRP HA H N N 369 TRP HB2 H N N 370 TRP HB3 H N N 371 TRP HD1 H N N 372 TRP HE1 H N N 373 TRP HE3 H N N 374 TRP HZ2 H N N 375 TRP HZ3 H N N 376 TRP HH2 H N N 377 TRP HXT H N N 378 TYR N N N N 379 TYR CA C N S 380 TYR C C N N 381 TYR O O N N 382 TYR CB C N N 383 TYR CG C Y N 384 TYR CD1 C Y N 385 TYR CD2 C Y N 386 TYR CE1 C Y N 387 TYR CE2 C Y N 388 TYR CZ C Y N 389 TYR OH O N N 390 TYR OXT O N N 391 TYR H H N N 392 TYR H2 H N N 393 TYR HA H N N 394 TYR HB2 H N N 395 TYR HB3 H N N 396 TYR HD1 H N N 397 TYR HD2 H N N 398 TYR HE1 H N N 399 TYR HE2 H N N 400 TYR HH H N N 401 TYR HXT H N N 402 VAL N N N N 403 VAL CA C N S 404 VAL C C N N 405 VAL O O N N 406 VAL CB C N N 407 VAL CG1 C N N 408 VAL CG2 C N N 409 VAL OXT O N N 410 VAL H H N N 411 VAL H2 H N N 412 VAL HA H N N 413 VAL HB H N N 414 VAL HG11 H N N 415 VAL HG12 H N N 416 VAL HG13 H N N 417 VAL HG21 H N N 418 VAL HG22 H N N 419 VAL HG23 H N N 420 VAL HXT H N N 421 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CADMIUM ION' CD 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2J62 _pdbx_initial_refinement_model.details 'PDB ENTRY 2J62' #