HEADER UNKNOWN FUNCTION 30-MAR-11 2YES TITLE CRYSTAL STRUCTURE OF RV0371C COMPLEX WITH MANGANESE FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS H37RV COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOCA-RELATED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: SER16-THR21 DISORDERED REGION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGST PARALLEL KEYWDS UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR H.J.CHO,B.S.KANG REVDAT 2 20-DEC-23 2YES 1 REMARK LINK REVDAT 1 06-APR-11 2YES 0 JRNL AUTH H.J.CHO,B.S.KANG JRNL TITL CRYSTAL STRUCTURE OF RV0371C COMPLEX WITH MANGANESE FROM JRNL TITL 2 MYCOBACTERIUM TUBERCULOSIS H37RV JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 28485 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1521 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2022 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.1440 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.2030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2744 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 204 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18000 REMARK 3 B22 (A**2) : 1.10000 REMARK 3 B33 (A**2) : -0.92000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.035 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.031 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.607 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2827 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3851 ; 0.845 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 372 ; 8.858 ; 5.108 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;32.228 ;22.222 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 423 ;11.110 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;18.048 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 464 ; 0.053 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2101 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1833 ; 0.676 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2934 ; 1.272 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 994 ; 2.030 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 915 ; 3.258 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 195 REMARK 3 ORIGIN FOR THE GROUP (A): 16.1328 -1.9945 -31.2197 REMARK 3 T TENSOR REMARK 3 T11: 0.0602 T22: 0.0139 REMARK 3 T33: 0.0565 T12: 0.0022 REMARK 3 T13: 0.0104 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.3046 L22: 1.4057 REMARK 3 L33: 2.2582 L12: -0.2654 REMARK 3 L13: -0.3379 L23: -0.3439 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: 0.1000 S13: -0.0007 REMARK 3 S21: -0.2876 S22: -0.0306 S23: -0.0318 REMARK 3 S31: 0.0705 S32: 0.0095 S33: 0.0118 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 194 REMARK 3 ORIGIN FOR THE GROUP (A): -4.7023 0.6109 -2.6362 REMARK 3 T TENSOR REMARK 3 T11: 0.0422 T22: 0.0349 REMARK 3 T33: 0.0595 T12: 0.0195 REMARK 3 T13: -0.0047 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 1.8621 L22: 1.5228 REMARK 3 L33: 1.9245 L12: -0.2118 REMARK 3 L13: 0.1382 L23: 0.4162 REMARK 3 S TENSOR REMARK 3 S11: -0.0824 S12: -0.2207 S13: 0.0957 REMARK 3 S21: 0.2456 S22: 0.0998 S23: -0.0592 REMARK 3 S31: 0.0828 S32: 0.0151 S33: -0.0174 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. RESIDUES 16-21, 76-81 ARE DISORDERED. REMARK 4 REMARK 4 2YES COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1290047876. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PROTEUM 300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30184 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2WEE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% (V/V) PEG 4000, 0.1 M MES (PH 6.0) REMARK 280 BY MICROSEEDING REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.11000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.18950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.84850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.18950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.11000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.84850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 ASN A 17 REMARK 465 ARG A 18 REMARK 465 LEU A 19 REMARK 465 GLY A 20 REMARK 465 VAL A 77 REMARK 465 GLU A 78 REMARK 465 ARG A 79 REMARK 465 GLY A 80 REMARK 465 PRO A 196 REMARK 465 SER A 197 REMARK 465 MET B 1 REMARK 465 SER B 16 REMARK 465 ASN B 17 REMARK 465 ARG B 18 REMARK 465 LEU B 19 REMARK 465 GLY B 20 REMARK 465 THR B 21 REMARK 465 GLU B 78 REMARK 465 VAL B 195 REMARK 465 PRO B 196 REMARK 465 SER B 197 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 15 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 ASP A 186 CG OD1 OD2 REMARK 470 ARG A 189 NE CZ NH1 NH2 REMARK 470 GLU A 193 CG CD OE1 OE2 REMARK 470 VAL A 195 CG1 CG2 REMARK 470 ARG B 29 NE CZ NH1 NH2 REMARK 470 ARG B 79 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 153 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 166 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 189 NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 HIS A 93 CA REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 -2.10 67.73 REMARK 500 THR A 31 -152.66 -128.51 REMARK 500 ARG B 29 -113.84 54.09 REMARK 500 THR B 31 -159.34 -144.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1196 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 105 OD2 REMARK 620 2 ASP A 181 OD1 87.8 REMARK 620 3 ASP A 183 OD1 87.0 104.8 REMARK 620 4 HOH A2114 O 171.0 83.8 98.3 REMARK 620 5 HOH A2115 O 86.6 89.5 164.1 90.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1195 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 105 OD2 REMARK 620 2 ASP B 181 OD1 90.2 REMARK 620 3 ASP B 183 OD1 90.6 91.3 REMARK 620 4 HOH B2086 O 167.7 79.2 95.9 REMARK 620 5 HOH B2087 O 86.8 86.6 176.6 86.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1197 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WEE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RV0371C FROM MYCOBACTERIUM TUBERCULOSIS H37RV REMARK 900 RELATED ID: 2WE9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RV0371C FROM MYCOBACTERIUM TUBERCULOSIS H37RV DBREF 2YES A 1 197 UNP O53706 O53706_MYCTU 1 197 DBREF 2YES B 1 197 UNP O53706 O53706_MYCTU 1 197 SEQRES 1 A 197 MET THR ALA THR GLN ILE THR GLY VAL VAL LEU ALA ALA SEQRES 2 A 197 GLY ARG SER ASN ARG LEU GLY THR PRO LYS GLN LEU LEU SEQRES 3 A 197 PRO TYR ARG ASP THR THR VAL LEU GLY ALA THR LEU ASP SEQRES 4 A 197 VAL ALA ARG GLN ALA GLY PHE ASP GLN LEU ILE LEU THR SEQRES 5 A 197 LEU GLY GLY ALA ALA SER ALA VAL ARG ALA ALA MET ALA SEQRES 6 A 197 LEU ASP GLY THR ASP VAL VAL VAL VAL GLU ASP VAL GLU SEQRES 7 A 197 ARG GLY CYS ALA ALA SER LEU ARG VAL ALA LEU ALA ARG SEQRES 8 A 197 VAL HIS PRO ARG ALA THR GLY ILE VAL LEU MET LEU GLY SEQRES 9 A 197 ASP GLN PRO GLN VAL ALA PRO ALA THR LEU ARG ARG ILE SEQRES 10 A 197 ILE ASP VAL GLY PRO ALA THR GLU ILE MET VAL CYS ARG SEQRES 11 A 197 TYR ALA ASP GLY VAL GLY HIS PRO PHE TRP PHE SER ARG SEQRES 12 A 197 THR VAL PHE GLY GLU LEU ALA ARG LEU HIS GLY ASP LYS SEQRES 13 A 197 GLY VAL TRP LYS LEU VAL HIS SER GLY ARG HIS PRO VAL SEQRES 14 A 197 ARG GLU LEU ALA VAL ASP GLY CSO VAL PRO LEU ASP VAL SEQRES 15 A 197 ASP THR TRP ASP ASP TYR ARG ARG LEU LEU GLU SER VAL SEQRES 16 A 197 PRO SER SEQRES 1 B 197 MET THR ALA THR GLN ILE THR GLY VAL VAL LEU ALA ALA SEQRES 2 B 197 GLY ARG SER ASN ARG LEU GLY THR PRO LYS GLN LEU LEU SEQRES 3 B 197 PRO TYR ARG ASP THR THR VAL LEU GLY ALA THR LEU ASP SEQRES 4 B 197 VAL ALA ARG GLN ALA GLY PHE ASP GLN LEU ILE LEU THR SEQRES 5 B 197 LEU GLY GLY ALA ALA SER ALA VAL ARG ALA ALA MET ALA SEQRES 6 B 197 LEU ASP GLY THR ASP VAL VAL VAL VAL GLU ASP VAL GLU SEQRES 7 B 197 ARG GLY CYS ALA ALA SER LEU ARG VAL ALA LEU ALA ARG SEQRES 8 B 197 VAL HIS PRO ARG ALA THR GLY ILE VAL LEU MET LEU GLY SEQRES 9 B 197 ASP GLN PRO GLN VAL ALA PRO ALA THR LEU ARG ARG ILE SEQRES 10 B 197 ILE ASP VAL GLY PRO ALA THR GLU ILE MET VAL CYS ARG SEQRES 11 B 197 TYR ALA ASP GLY VAL GLY HIS PRO PHE TRP PHE SER ARG SEQRES 12 B 197 THR VAL PHE GLY GLU LEU ALA ARG LEU HIS GLY ASP LYS SEQRES 13 B 197 GLY VAL TRP LYS LEU VAL HIS SER GLY ARG HIS PRO VAL SEQRES 14 B 197 ARG GLU LEU ALA VAL ASP GLY CSO VAL PRO LEU ASP VAL SEQRES 15 B 197 ASP THR TRP ASP ASP TYR ARG ARG LEU LEU GLU SER VAL SEQRES 16 B 197 PRO SER MODRES 2YES CSO A 177 CYS S-HYDROXYCYSTEINE MODRES 2YES CSO B 177 CYS S-HYDROXYCYSTEINE HET CSO A 177 7 HET CSO B 177 7 HET MN A1196 1 HET GOL A1197 6 HET MN B1195 1 HET GOL B1196 6 HET GOL B1197 6 HETNAM CSO S-HYDROXYCYSTEINE HETNAM MN MANGANESE (II) ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSO 2(C3 H7 N O3 S) FORMUL 3 MN 2(MN 2+) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 8 HOH *204(H2 O) HELIX 1 1 PRO A 22 LEU A 25 5 4 HELIX 2 2 VAL A 33 ARG A 42 1 10 HELIX 3 3 ALA A 56 MET A 64 1 9 HELIX 4 4 ALA A 83 ALA A 90 1 8 HELIX 5 5 ALA A 110 GLY A 121 1 12 HELIX 6 6 PRO A 122 THR A 124 5 3 HELIX 7 7 VAL A 145 ARG A 151 1 7 HELIX 8 8 GLY A 154 LYS A 156 5 3 HELIX 9 9 GLY A 157 HIS A 163 1 7 HELIX 10 10 THR A 184 SER A 194 1 11 HELIX 11 11 PRO B 22 LEU B 25 5 4 HELIX 12 12 VAL B 33 ARG B 42 1 10 HELIX 13 13 ALA B 56 MET B 64 1 9 HELIX 14 14 ALA B 83 ALA B 90 1 8 HELIX 15 15 ALA B 110 GLY B 121 1 12 HELIX 16 16 PRO B 122 THR B 124 5 3 HELIX 17 17 VAL B 145 ARG B 151 1 7 HELIX 18 18 GLY B 154 LYS B 156 5 3 HELIX 19 19 GLY B 157 HIS B 163 1 7 HELIX 20 20 THR B 184 SER B 194 1 11 SHEET 1 AA 7 ASP A 70 VAL A 73 0 SHEET 2 AA 7 GLN A 48 LEU A 53 1 O LEU A 49 N ASP A 70 SHEET 3 AA 7 GLN A 5 ALA A 12 1 O GLY A 8 N ILE A 50 SHEET 4 AA 7 ALA A 96 LEU A 103 1 N THR A 97 O GLN A 5 SHEET 5 AA 7 GLY A 134 SER A 142 -1 O PHE A 139 N LEU A 101 SHEET 6 AA 7 ILE A 126 TYR A 131 -1 O MET A 127 N TRP A 140 SHEET 7 AA 7 VAL A 169 ALA A 173 1 O ARG A 170 N VAL A 128 SHEET 1 AB 2 PRO A 27 TYR A 28 0 SHEET 2 AB 2 THR A 31 THR A 32 -1 O THR A 31 N TYR A 28 SHEET 1 BA 7 ASP B 70 VAL B 73 0 SHEET 2 BA 7 GLN B 48 LEU B 53 1 O LEU B 49 N ASP B 70 SHEET 3 BA 7 GLN B 5 ALA B 12 1 O GLY B 8 N ILE B 50 SHEET 4 BA 7 ALA B 96 LEU B 103 1 N THR B 97 O GLN B 5 SHEET 5 BA 7 GLY B 134 SER B 142 -1 O PHE B 139 N LEU B 101 SHEET 6 BA 7 ILE B 126 TYR B 131 -1 O MET B 127 N TRP B 140 SHEET 7 BA 7 VAL B 169 ALA B 173 1 O ARG B 170 N VAL B 128 SHEET 1 BB 2 PRO B 27 TYR B 28 0 SHEET 2 BB 2 THR B 31 THR B 32 -1 O THR B 31 N TYR B 28 LINK C GLY A 176 N CSO A 177 1555 1555 1.33 LINK C CSO A 177 N VAL A 178 1555 1555 1.33 LINK C GLY B 176 N CSO B 177 1555 1555 1.33 LINK C CSO B 177 N VAL B 178 1555 1555 1.33 LINK OD2 ASP A 105 MN MN A1196 1555 1555 2.19 LINK OD1 ASP A 181 MN MN A1196 1555 1555 1.87 LINK OD1 ASP A 183 MN MN A1196 1555 1555 2.30 LINK MN MN A1196 O HOH A2114 1555 1555 2.08 LINK MN MN A1196 O HOH A2115 1555 1555 2.25 LINK OD2 ASP B 105 MN MN B1195 1555 1555 2.10 LINK OD1 ASP B 181 MN MN B1195 1555 1555 2.01 LINK OD1 ASP B 183 MN MN B1195 1555 1555 2.18 LINK MN MN B1195 O HOH B2086 1555 1555 2.26 LINK MN MN B1195 O HOH B2087 1555 1555 2.25 CISPEP 1 HIS A 137 PRO A 138 0 1.05 CISPEP 2 HIS B 137 PRO B 138 0 2.40 SITE 1 AC1 6 LYS A 23 ASP A 105 ASP A 181 ASP A 183 SITE 2 AC1 6 HOH A2114 HOH A2115 SITE 1 AC2 8 LEU A 11 GLY A 14 LYS A 23 LEU A 103 SITE 2 AC2 8 ASP A 105 HOH A2115 HOH A2116 HOH A2117 SITE 1 AC3 6 LYS B 23 ASP B 105 ASP B 181 ASP B 183 SITE 2 AC3 6 HOH B2086 HOH B2087 SITE 1 AC4 9 LEU B 11 ALA B 12 GLY B 14 LYS B 23 SITE 2 AC4 9 GLN B 24 GLY B 104 ASP B 105 GOL B1197 SITE 3 AC4 9 HOH B2003 SITE 1 AC5 5 LEU B 11 GLY B 14 ASP B 155 GOL B1196 SITE 2 AC5 5 HOH B2087 CRYST1 42.220 59.697 146.379 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023685 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016751 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006832 0.00000