HEADER IMMUNE SYSTEM 01-APR-11 2YF2 TITLE CRYSTAL STRUCTURE OF THE OLIGOMERISATION DOMAIN OF C4B-BINDING PROTEIN TITLE 2 FROM GALLUS GALLUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: C4B BINDING PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G; COMPND 4 FRAGMENT: OLIGOMERISATION DOMAIN, RESIDUES 395-457; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSET KEYWDS IMMUNE SYSTEM, COMPLEMENT SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.J.E.CAESAR,F.HILL,S.M.LEA REVDAT 2 06-NOV-24 2YF2 1 REMARK REVDAT 1 18-APR-12 2YF2 0 JRNL AUTH J.J.E.CAESAR,F.HILL,S.M.LEA JRNL TITL CRYSTAL STRUCTURE OF THE OLIGOMERISATION DOMAIN OF JRNL TITL 2 C4B-BINDING PROTEIN FROM GALLUS GALLUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 23563 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1199 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.63 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2287 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2523 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2174 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE : 0.2406 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.94 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 113 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2882 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 120 REMARK 3 SOLVENT ATOMS : 71 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -23.36410 REMARK 3 B22 (A**2) : 18.20620 REMARK 3 B33 (A**2) : 5.15790 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.259 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.191 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.261 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.193 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.907 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3010 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4013 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1088 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 96 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 395 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3010 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 387 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3639 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.99 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.81 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.67 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY. REMARK 4 REMARK 4 2YF2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-APR-11. REMARK 100 THE DEPOSITION ID IS D_1290047886. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23669 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 85.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 0.1M SODIUM REMARK 280 ACETATE, 8% PEG 3350, PH 4.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.73250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.73250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.94400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.11900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.94400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.11900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.73250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.94400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 70.11900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 42.73250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.94400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 70.11900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEPTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -152.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C2006 LIES ON A SPECIAL POSITION. REMARK 375 HOH F2005 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, CYS 395 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN B, CYS 395 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN C, CYS 395 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN D, CYS 395 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN E, CYS 395 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN F, CYS 395 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN G, CYS 395 TO SER REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 396 REMARK 465 LYS A 397 REMARK 465 LYS A 398 REMARK 465 GLN A 399 REMARK 465 GLY A 400 REMARK 465 ASP A 401 REMARK 465 GLY A 459 REMARK 465 SER A 460 REMARK 465 SER B 396 REMARK 465 LYS B 397 REMARK 465 LYS B 398 REMARK 465 GLN B 399 REMARK 465 GLY B 400 REMARK 465 GLY B 447 REMARK 465 LEU B 448 REMARK 465 SER B 449 REMARK 465 LYS B 450 REMARK 465 GLU B 451 REMARK 465 PHE B 452 REMARK 465 LEU B 453 REMARK 465 GLU B 454 REMARK 465 HIS B 455 REMARK 465 ILE B 456 REMARK 465 LEU B 457 REMARK 465 HIS B 458 REMARK 465 GLY B 459 REMARK 465 SER B 460 REMARK 465 SER C 396 REMARK 465 LYS C 397 REMARK 465 LYS C 398 REMARK 465 GLN C 399 REMARK 465 GLY C 400 REMARK 465 ASP C 401 REMARK 465 SER C 460 REMARK 465 SER D 396 REMARK 465 LYS D 397 REMARK 465 LYS D 398 REMARK 465 GLN D 399 REMARK 465 GLY D 400 REMARK 465 ASP D 401 REMARK 465 LEU D 448 REMARK 465 SER D 449 REMARK 465 LYS D 450 REMARK 465 GLU D 451 REMARK 465 PHE D 452 REMARK 465 LEU D 453 REMARK 465 GLU D 454 REMARK 465 HIS D 455 REMARK 465 ILE D 456 REMARK 465 LEU D 457 REMARK 465 HIS D 458 REMARK 465 GLY D 459 REMARK 465 SER D 460 REMARK 465 SER E 396 REMARK 465 LYS E 397 REMARK 465 LYS E 398 REMARK 465 GLN E 399 REMARK 465 GLY E 400 REMARK 465 ASP E 401 REMARK 465 ALA E 402 REMARK 465 ASP E 403 REMARK 465 GLY E 459 REMARK 465 SER E 460 REMARK 465 SER F 396 REMARK 465 LYS F 397 REMARK 465 LYS F 398 REMARK 465 GLN F 399 REMARK 465 GLY F 400 REMARK 465 ASP F 401 REMARK 465 ALA F 402 REMARK 465 LEU F 448 REMARK 465 SER F 449 REMARK 465 LYS F 450 REMARK 465 GLU F 451 REMARK 465 PHE F 452 REMARK 465 LEU F 453 REMARK 465 GLU F 454 REMARK 465 HIS F 455 REMARK 465 ILE F 456 REMARK 465 LEU F 457 REMARK 465 HIS F 458 REMARK 465 GLY F 459 REMARK 465 SER F 460 REMARK 465 SER G 396 REMARK 465 LYS G 397 REMARK 465 LYS G 398 REMARK 465 GLN G 399 REMARK 465 GLY G 400 REMARK 465 ASP G 401 REMARK 465 ALA G 402 REMARK 465 SER G 460 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 458 CG ND1 CD2 CE1 NE2 REMARK 470 HIS E 458 CB CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN D 446 46.72 -102.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 1448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 1449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO G 1460 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 1448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1447 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 1460 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO G 1461 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO G 1462 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1450 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 1449 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO G 1463 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1459 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1451 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 1450 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 1461 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 1462 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1452 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT E 1459 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT F 1451 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1453 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 1450 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 1463 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 1451 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1460 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1454 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT E 1460 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1455 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT G 1464 DBREF 2YF2 A 396 458 UNP E1C2T5 E1C2T5_CHICK 395 457 DBREF 2YF2 B 396 458 UNP E1C2T5 E1C2T5_CHICK 395 457 DBREF 2YF2 C 396 458 UNP E1C2T5 E1C2T5_CHICK 395 457 DBREF 2YF2 D 396 458 UNP E1C2T5 E1C2T5_CHICK 395 457 DBREF 2YF2 E 396 458 UNP E1C2T5 E1C2T5_CHICK 395 457 DBREF 2YF2 F 396 458 UNP E1C2T5 E1C2T5_CHICK 395 457 DBREF 2YF2 G 396 458 UNP E1C2T5 E1C2T5_CHICK 395 457 SEQADV 2YF2 SER A 396 UNP E1C2T5 CYS 395 ENGINEERED MUTATION SEQADV 2YF2 SER B 396 UNP E1C2T5 CYS 395 ENGINEERED MUTATION SEQADV 2YF2 SER C 396 UNP E1C2T5 CYS 395 ENGINEERED MUTATION SEQADV 2YF2 SER D 396 UNP E1C2T5 CYS 395 ENGINEERED MUTATION SEQADV 2YF2 SER E 396 UNP E1C2T5 CYS 395 ENGINEERED MUTATION SEQADV 2YF2 SER F 396 UNP E1C2T5 CYS 395 ENGINEERED MUTATION SEQADV 2YF2 SER G 396 UNP E1C2T5 CYS 395 ENGINEERED MUTATION SEQADV 2YF2 GLY A 459 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 SER A 460 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 GLY B 459 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 SER B 460 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 GLY C 459 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 SER C 460 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 GLY D 459 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 SER D 460 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 GLY E 459 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 SER E 460 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 GLY F 459 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 SER F 460 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 GLY G 459 UNP E1C2T5 EXPRESSION TAG SEQADV 2YF2 SER G 460 UNP E1C2T5 EXPRESSION TAG SEQRES 1 A 65 SER LYS LYS GLN GLY ASP ALA ASP VAL CYS GLY GLU VAL SEQRES 2 A 65 ALA TYR ILE GLN SER VAL VAL SER ASP CYS HIS VAL PRO SEQRES 3 A 65 THR GLU ASP VAL LYS THR LEU LEU GLU ILE ARG LYS LEU SEQRES 4 A 65 PHE LEU GLU ILE GLN LYS LEU LYS VAL GLU LEU GLN GLY SEQRES 5 A 65 LEU SER LYS GLU PHE LEU GLU HIS ILE LEU HIS GLY SER SEQRES 1 B 65 SER LYS LYS GLN GLY ASP ALA ASP VAL CYS GLY GLU VAL SEQRES 2 B 65 ALA TYR ILE GLN SER VAL VAL SER ASP CYS HIS VAL PRO SEQRES 3 B 65 THR GLU ASP VAL LYS THR LEU LEU GLU ILE ARG LYS LEU SEQRES 4 B 65 PHE LEU GLU ILE GLN LYS LEU LYS VAL GLU LEU GLN GLY SEQRES 5 B 65 LEU SER LYS GLU PHE LEU GLU HIS ILE LEU HIS GLY SER SEQRES 1 C 65 SER LYS LYS GLN GLY ASP ALA ASP VAL CYS GLY GLU VAL SEQRES 2 C 65 ALA TYR ILE GLN SER VAL VAL SER ASP CYS HIS VAL PRO SEQRES 3 C 65 THR GLU ASP VAL LYS THR LEU LEU GLU ILE ARG LYS LEU SEQRES 4 C 65 PHE LEU GLU ILE GLN LYS LEU LYS VAL GLU LEU GLN GLY SEQRES 5 C 65 LEU SER LYS GLU PHE LEU GLU HIS ILE LEU HIS GLY SER SEQRES 1 D 65 SER LYS LYS GLN GLY ASP ALA ASP VAL CYS GLY GLU VAL SEQRES 2 D 65 ALA TYR ILE GLN SER VAL VAL SER ASP CYS HIS VAL PRO SEQRES 3 D 65 THR GLU ASP VAL LYS THR LEU LEU GLU ILE ARG LYS LEU SEQRES 4 D 65 PHE LEU GLU ILE GLN LYS LEU LYS VAL GLU LEU GLN GLY SEQRES 5 D 65 LEU SER LYS GLU PHE LEU GLU HIS ILE LEU HIS GLY SER SEQRES 1 E 65 SER LYS LYS GLN GLY ASP ALA ASP VAL CYS GLY GLU VAL SEQRES 2 E 65 ALA TYR ILE GLN SER VAL VAL SER ASP CYS HIS VAL PRO SEQRES 3 E 65 THR GLU ASP VAL LYS THR LEU LEU GLU ILE ARG LYS LEU SEQRES 4 E 65 PHE LEU GLU ILE GLN LYS LEU LYS VAL GLU LEU GLN GLY SEQRES 5 E 65 LEU SER LYS GLU PHE LEU GLU HIS ILE LEU HIS GLY SER SEQRES 1 F 65 SER LYS LYS GLN GLY ASP ALA ASP VAL CYS GLY GLU VAL SEQRES 2 F 65 ALA TYR ILE GLN SER VAL VAL SER ASP CYS HIS VAL PRO SEQRES 3 F 65 THR GLU ASP VAL LYS THR LEU LEU GLU ILE ARG LYS LEU SEQRES 4 F 65 PHE LEU GLU ILE GLN LYS LEU LYS VAL GLU LEU GLN GLY SEQRES 5 F 65 LEU SER LYS GLU PHE LEU GLU HIS ILE LEU HIS GLY SER SEQRES 1 G 65 SER LYS LYS GLN GLY ASP ALA ASP VAL CYS GLY GLU VAL SEQRES 2 G 65 ALA TYR ILE GLN SER VAL VAL SER ASP CYS HIS VAL PRO SEQRES 3 G 65 THR GLU ASP VAL LYS THR LEU LEU GLU ILE ARG LYS LEU SEQRES 4 G 65 PHE LEU GLU ILE GLN LYS LEU LYS VAL GLU LEU GLN GLY SEQRES 5 G 65 LEU SER LYS GLU PHE LEU GLU HIS ILE LEU HIS GLY SER HET EDO A1459 4 HET ACT A1460 4 HET EDO B1447 4 HET EDO B1448 4 HET EDO B1449 4 HET EDO B1450 4 HET EDO B1451 4 HET EDO B1452 4 HET ACT B1453 4 HET ACT B1454 4 HET ACT B1455 4 HET EDO C1460 4 HET EDO C1461 4 HET EDO C1462 4 HET ACT C1463 4 HET EDO D1448 4 HET EDO D1449 4 HET ACT D1450 4 HET ACT D1451 4 HET ACT E1459 4 HET ACT E1460 4 HET EDO F1448 4 HET EDO F1449 4 HET EDO F1450 4 HET ACT F1451 4 HET EDO G1460 4 HET EDO G1461 4 HET EDO G1462 4 HET EDO G1463 4 HET ACT G1464 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 8 EDO 19(C2 H6 O2) FORMUL 9 ACT 11(C2 H3 O2 1-) FORMUL 38 HOH *71(H2 O) HELIX 1 1 ALA A 402 CYS A 418 1 17 HELIX 2 2 PRO A 421 HIS A 458 1 38 HELIX 3 3 ASP B 401 CYS B 418 1 18 HELIX 4 4 PRO B 421 GLN B 446 1 26 HELIX 5 5 ALA C 402 CYS C 418 1 17 HELIX 6 6 PRO C 421 HIS C 458 1 38 HELIX 7 7 ASP D 403 CYS D 418 1 16 HELIX 8 8 PRO D 421 GLN D 446 1 26 HELIX 9 9 VAL E 404 CYS E 418 1 15 HELIX 10 10 PRO E 421 HIS E 458 1 38 HELIX 11 11 ASP F 403 CYS F 418 1 16 HELIX 12 12 PRO F 421 GLY F 447 1 27 HELIX 13 13 ASP G 403 CYS G 418 1 16 HELIX 14 14 PRO G 421 HIS G 458 1 38 SSBOND 1 CYS A 405 CYS B 418 1555 1555 2.04 SSBOND 2 CYS A 418 CYS G 405 1555 1555 2.04 SSBOND 3 CYS B 405 CYS C 418 1555 1555 2.05 SSBOND 4 CYS C 405 CYS D 418 1555 1555 2.04 SSBOND 5 CYS D 405 CYS E 418 1555 1555 2.04 SSBOND 6 CYS E 405 CYS F 418 1555 1555 2.04 SSBOND 7 CYS F 405 CYS G 418 1555 1555 2.04 SITE 1 AC1 4 LYS C 433 LYS D 433 GLU D 437 EDO D1449 SITE 1 AC2 3 GLU C 430 GLU D 430 EDO D1448 SITE 1 AC3 4 GLU F 430 GLU G 430 LEU G 434 HOH G2008 SITE 1 AC4 6 LYS E 433 GLU F 430 LYS F 433 LEU F 434 SITE 2 AC4 6 GLU F 437 HOH F2012 SITE 1 AC5 5 GLN A 412 THR A 422 ASP B 424 EDO B1450 SITE 2 AC5 5 PRO D 421 SITE 1 AC6 4 GLU A 430 GLU B 430 LEU B 434 HOH B2008 SITE 1 AC7 6 GLN B 412 SER B 416 THR B 422 EDO B1451 SITE 2 AC7 6 ACT B1454 HIS C 419 SITE 1 AC8 8 GLU B 423 EDO B1451 EDO B1452 GLU C 423 SITE 2 AC8 8 ASP C 424 THR C 427 EDO C1461 HOH C2006 SITE 1 AC9 1 GLU G 444 SITE 1 BC1 5 LYS F 440 GLU G 437 LYS G 440 LEU G 441 SITE 2 BC1 5 GLU G 444 SITE 1 BC2 7 GLU A 423 GLU B 423 ASP B 424 THR B 427 SITE 2 BC2 7 EDO B1447 HOH B2012 GLU D 423 SITE 1 BC3 5 LYS E 426 GLU F 423 LYS F 426 THR F 427 SITE 2 BC3 5 GLU F 430 SITE 1 BC4 6 PRO E 421 THR E 422 PRO G 421 THR G 422 SITE 2 BC4 6 ACT G1464 HOH G2009 SITE 1 BC5 7 GLU A 423 ASP A 424 THR A 427 GLU E 423 SITE 2 BC5 7 HOH E2005 GLU G 423 ACT G1464 SITE 1 BC6 8 GLN B 412 THR B 422 EDO B1449 EDO B1452 SITE 2 BC6 8 PRO C 421 ASP C 424 LEU C 428 EDO C1460 SITE 1 BC7 1 ASP G 424 SITE 1 BC8 6 LYS B 426 GLU C 423 LYS C 426 THR C 427 SITE 2 BC8 6 GLU C 430 EDO C1460 SITE 1 BC9 10 PRO B 421 THR B 422 GLU B 423 EDO B1452 SITE 2 BC9 10 ACT B1454 THR C 422 GLU C 423 ACT C1463 SITE 3 BC9 10 HOH C2013 THR D 427 SITE 1 CC1 10 THR B 422 GLU B 423 EDO B1451 ACT B1454 SITE 2 CC1 10 PRO C 421 THR C 422 GLU C 423 THR C 427 SITE 3 CC1 10 EDO C1460 EDO C1462 SITE 1 CC2 5 LEU C 457 GLY C 459 GLU D 407 ARG E 432 SITE 2 CC2 5 LYS F 442 SITE 1 CC3 3 VAL D 404 ARG F 432 PHE F 435 SITE 1 CC4 3 GLU A 407 ARG B 432 LYS C 442 SITE 1 CC5 4 VAL B 404 ILE D 431 ARG D 432 PHE D 435 SITE 1 CC6 6 PRO B 421 GLN C 412 THR C 422 EDO C1462 SITE 2 CC6 6 ASP D 424 LEU D 428 SITE 1 CC7 5 PRO A 421 THR A 422 PRO D 421 THR D 422 SITE 2 CC7 5 HOH D2011 SITE 1 CC8 3 ARG A 432 PHE A 435 VAL F 404 SITE 1 CC9 7 PRO B 421 THR B 422 EDO B1449 EDO B1452 SITE 2 CC9 7 PRO C 421 THR C 422 EDO C1462 SITE 1 DC1 5 GLN E 412 THR E 422 ASP F 424 LEU F 428 SITE 2 DC1 5 PRO G 421 SITE 1 DC2 2 LYS B 426 GLU B 430 SITE 1 DC3 7 ASP A 424 LEU A 428 EDO A1459 PRO E 421 SITE 2 DC3 7 GLN G 412 THR G 422 EDO G1463 CRYST1 83.888 140.238 85.465 90.00 90.00 90.00 C 2 2 21 56 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011921 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007131 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011701 0.00000 MTRIX1 1 0.281800 0.852000 -0.441300 -5.17140 1 MTRIX2 1 -0.903500 0.080800 -0.420900 23.22850 1 MTRIX3 1 -0.322900 0.517300 0.792500 17.31460 1 MTRIX1 2 -0.186800 0.039900 0.981600 -20.18040 1 MTRIX2 2 -0.118300 0.991000 -0.062800 5.43750 1 MTRIX3 2 -0.975200 -0.127900 -0.180400 68.59310 1 MTRIX1 3 -0.879000 -0.124400 0.460300 17.07930 1 MTRIX2 3 -0.196600 0.974100 -0.112100 6.75040 1 MTRIX3 3 -0.434400 -0.189000 -0.880700 90.75510 1 MTRIX1 4 -0.918400 -0.067300 -0.389800 51.76550 1 MTRIX2 4 -0.017400 0.991400 -0.130000 6.32810 1 MTRIX3 4 0.395200 -0.112600 -0.911700 73.70970 1 MTRIX1 5 -0.174900 -0.064300 -0.982500 69.23430 1 MTRIX2 5 -0.239800 0.970600 -0.020800 -2.22420 1 MTRIX3 5 0.954900 0.232000 -0.185200 22.59740 1 MTRIX1 6 0.606600 -0.061800 -0.792600 40.70830 1 MTRIX2 6 0.025700 0.998000 -0.058100 1.54810 1 MTRIX3 6 0.794600 0.014900 0.606900 1.92790 1