HEADER HYDROLASE 05-APR-11 2YFC TITLE STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE TITLE 2 NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS TITLE 3 RADIODURANS, COMPLEXED WITH MN AND DUMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: DR2231; COMPND 5 EC: 3.6.1.19; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 243230; SOURCE 4 STRAIN: R1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET151/D-TOPO KEYWDS HYDROLASE, DIMERIC DUTPASE EXPDTA X-RAY DIFFRACTION AUTHOR A.M.D.GONCALVES,D.DE SANCTIS,S.M.MCSWEENEY REVDAT 3 20-DEC-23 2YFC 1 REMARK LINK ATOM REVDAT 2 07-SEP-11 2YFC 1 JRNL REMARK HETSYN VERSN REVDAT 1 06-JUL-11 2YFC 0 JRNL AUTH A.M.D.GONCALVES,D.DESANCTIS,S.M.MCSWEENEY JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO DR2231 PROTEIN, THE JRNL TITL 2 MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM JRNL TITL 3 DEINOCOCCUS RADIODURANS. JRNL REF J.BIOL.CHEM. V. 286 30691 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21733847 JRNL DOI 10.1074/JBC.M111.247999 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 41628 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.0018 - 4.9339 0.92 2631 138 0.1989 0.1964 REMARK 3 2 4.9339 - 3.9259 0.98 2671 142 0.1586 0.2037 REMARK 3 3 3.9259 - 3.4324 1.00 2709 142 0.1716 0.1790 REMARK 3 4 3.4324 - 3.1199 1.00 2664 141 0.1835 0.2286 REMARK 3 5 3.1199 - 2.8970 1.00 2679 140 0.1940 0.2127 REMARK 3 6 2.8970 - 2.7266 1.00 2658 140 0.1914 0.2460 REMARK 3 7 2.7266 - 2.5904 1.00 2657 140 0.1897 0.2718 REMARK 3 8 2.5904 - 2.4778 0.99 2615 137 0.1856 0.2635 REMARK 3 9 2.4778 - 2.3826 0.99 2605 138 0.1728 0.2434 REMARK 3 10 2.3826 - 2.3005 0.99 2654 140 0.1640 0.2148 REMARK 3 11 2.3005 - 2.2287 0.99 2635 138 0.1613 0.2147 REMARK 3 12 2.2287 - 2.1650 0.99 2602 137 0.1595 0.2360 REMARK 3 13 2.1650 - 2.1081 0.99 2585 137 0.1588 0.2084 REMARK 3 14 2.1081 - 2.0567 0.99 2607 136 0.1667 0.2155 REMARK 3 15 2.0567 - 2.0100 0.98 2574 136 0.1879 0.2532 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 47.38 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.68350 REMARK 3 B22 (A**2) : -0.35260 REMARK 3 B33 (A**2) : -0.19060 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 4263 REMARK 3 ANGLE : 1.151 5804 REMARK 3 CHIRALITY : 0.069 639 REMARK 3 PLANARITY : 0.005 780 REMARK 3 DIHEDRAL : 15.079 1623 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 7:45) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6612 -58.8956 13.2917 REMARK 3 T TENSOR REMARK 3 T11: 0.1786 T22: 0.1552 REMARK 3 T33: 0.1532 T12: 0.0322 REMARK 3 T13: 0.0132 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 0.5008 L22: 0.7198 REMARK 3 L33: 0.3446 L12: -0.1851 REMARK 3 L13: -0.1004 L23: -0.4233 REMARK 3 S TENSOR REMARK 3 S11: -0.1732 S12: -0.1542 S13: -0.0414 REMARK 3 S21: -0.0498 S22: 0.0082 S23: 0.0004 REMARK 3 S31: 0.1344 S32: 0.0983 S33: 0.1036 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 46:144) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3326 -47.3563 0.1675 REMARK 3 T TENSOR REMARK 3 T11: 0.0720 T22: 0.1217 REMARK 3 T33: 0.1057 T12: 0.0336 REMARK 3 T13: 0.0086 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.1656 L22: 0.4299 REMARK 3 L33: 0.8289 L12: 0.1320 REMARK 3 L13: 0.0614 L23: -0.5590 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: -0.0279 S13: -0.0319 REMARK 3 S21: 0.0760 S22: 0.0481 S23: -0.0400 REMARK 3 S31: -0.0067 S32: -0.0271 S33: 0.0112 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESID 7:28) REMARK 3 ORIGIN FOR THE GROUP (A): -31.9262 -50.3673 -9.5722 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.1410 REMARK 3 T33: 0.1318 T12: -0.0378 REMARK 3 T13: -0.0134 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 0.3885 L22: 0.5255 REMARK 3 L33: 0.6836 L12: -0.3280 REMARK 3 L13: -0.1527 L23: 0.4120 REMARK 3 S TENSOR REMARK 3 S11: 0.0716 S12: 0.1831 S13: -0.2153 REMARK 3 S21: -0.2078 S22: -0.0007 S23: 0.2393 REMARK 3 S31: 0.0146 S32: -0.1084 S33: -0.0439 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 29:145) REMARK 3 ORIGIN FOR THE GROUP (A): -20.1297 -53.0577 1.3258 REMARK 3 T TENSOR REMARK 3 T11: 0.0959 T22: 0.0819 REMARK 3 T33: 0.0860 T12: 0.0291 REMARK 3 T13: 0.0114 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 0.0413 L22: 0.5338 REMARK 3 L33: 0.5506 L12: 0.0157 REMARK 3 L13: -0.1023 L23: -0.1591 REMARK 3 S TENSOR REMARK 3 S11: -0.0572 S12: -0.0309 S13: -0.0286 REMARK 3 S21: -0.0104 S22: -0.0122 S23: -0.0771 REMARK 3 S31: 0.1394 S32: 0.0072 S33: 0.0109 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN C AND RESID 7:45) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3554 -11.4590 12.9564 REMARK 3 T TENSOR REMARK 3 T11: 0.2659 T22: 0.1099 REMARK 3 T33: 0.1673 T12: 0.0155 REMARK 3 T13: -0.0069 T23: 0.0387 REMARK 3 L TENSOR REMARK 3 L11: 0.2084 L22: 0.3223 REMARK 3 L33: 0.5723 L12: 0.2352 REMARK 3 L13: 0.0255 L23: -0.0113 REMARK 3 S TENSOR REMARK 3 S11: -0.1118 S12: 0.0681 S13: 0.1859 REMARK 3 S21: -0.1681 S22: 0.0155 S23: -0.0783 REMARK 3 S31: -0.4813 S32: 0.0910 S33: 0.0432 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN C AND RESID 46:143) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9976 -23.1219 26.4354 REMARK 3 T TENSOR REMARK 3 T11: 0.0645 T22: 0.0782 REMARK 3 T33: 0.0739 T12: 0.0063 REMARK 3 T13: -0.0103 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.1345 L22: 0.7831 REMARK 3 L33: 0.9449 L12: -0.1371 REMARK 3 L13: -0.0548 L23: -0.4071 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: -0.0362 S13: 0.0076 REMARK 3 S21: -0.0240 S22: 0.0085 S23: -0.0161 REMARK 3 S31: -0.0962 S32: -0.0602 S33: -0.0047 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN D AND RESID 7:28) REMARK 3 ORIGIN FOR THE GROUP (A): -32.9728 -20.7508 35.8615 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1359 REMARK 3 T33: 0.1216 T12: 0.0671 REMARK 3 T13: 0.0296 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.1998 L22: 0.8189 REMARK 3 L33: 0.3096 L12: 0.1004 REMARK 3 L13: -0.1951 L23: 0.1500 REMARK 3 S TENSOR REMARK 3 S11: -0.0321 S12: -0.1499 S13: 0.1435 REMARK 3 S21: 0.2017 S22: 0.0727 S23: 0.2698 REMARK 3 S31: -0.0451 S32: -0.1896 S33: 0.0199 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN D AND RESID 29:144) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2774 -17.1960 25.2073 REMARK 3 T TENSOR REMARK 3 T11: 0.1150 T22: 0.0620 REMARK 3 T33: 0.1009 T12: -0.0109 REMARK 3 T13: -0.0106 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.1453 L22: 0.7498 REMARK 3 L33: 0.4440 L12: -0.0243 REMARK 3 L13: 0.1844 L23: -0.2855 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: 0.0190 S13: 0.0376 REMARK 3 S21: 0.0708 S22: -0.0041 S23: -0.0908 REMARK 3 S31: -0.2329 S32: 0.0775 S33: 0.0456 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-APR-11. REMARK 100 THE DEPOSITION ID IS D_1290047940. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97627 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48355 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2YF9 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.18 M LITHIUM ACETATE AND 20% (W/V) REMARK 280 PEG 3350, 10MM DUTP AND 10 MM MANGANESE CHLORIDE. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.36650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 75.09550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.36650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 75.09550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 ILE A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 PHE A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 LEU A 4 REMARK 465 PRO A 5 REMARK 465 CYS A 6 REMARK 465 ALA A 24 REMARK 465 PRO A 145 REMARK 465 ALA A 146 REMARK 465 ASP A 147 REMARK 465 ASP A 148 REMARK 465 GLY B -5 REMARK 465 ILE B -4 REMARK 465 ASP B -3 REMARK 465 PRO B -2 REMARK 465 PHE B -1 REMARK 465 THR B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 LEU B 4 REMARK 465 PRO B 5 REMARK 465 CYS B 6 REMARK 465 PRO B 116 REMARK 465 ARG B 117 REMARK 465 ARG B 118 REMARK 465 ALA B 119 REMARK 465 ASP B 120 REMARK 465 GLY B 121 REMARK 465 LYS B 122 REMARK 465 GLN B 123 REMARK 465 ALA B 146 REMARK 465 ASP B 147 REMARK 465 ASP B 148 REMARK 465 GLY C -5 REMARK 465 ILE C -4 REMARK 465 ASP C -3 REMARK 465 PRO C -2 REMARK 465 PHE C -1 REMARK 465 THR C 0 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ASP C 3 REMARK 465 LEU C 4 REMARK 465 PRO C 5 REMARK 465 CYS C 6 REMARK 465 ALA C 144 REMARK 465 PRO C 145 REMARK 465 ALA C 146 REMARK 465 ASP C 147 REMARK 465 ASP C 148 REMARK 465 GLY D -5 REMARK 465 ILE D -4 REMARK 465 ASP D -3 REMARK 465 PRO D -2 REMARK 465 PHE D -1 REMARK 465 THR D 0 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ASP D 3 REMARK 465 LEU D 4 REMARK 465 PRO D 5 REMARK 465 CYS D 6 REMARK 465 PRO D 116 REMARK 465 ARG D 117 REMARK 465 ARG D 118 REMARK 465 ALA D 119 REMARK 465 ASP D 120 REMARK 465 GLY D 121 REMARK 465 LYS D 122 REMARK 465 GLN D 123 REMARK 465 PRO D 145 REMARK 465 ALA D 146 REMARK 465 ASP D 147 REMARK 465 ASP D 148 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 7 CG CD REMARK 470 PRO B 145 CG CD REMARK 470 PRO C 7 CG CD REMARK 470 HIS C 143 CG ND1 CD2 CE1 NE2 REMARK 470 PRO D 7 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH12 ARG C 117 O HOH C 2045 0.46 REMARK 500 NH1 ARG C 117 O HOH C 2045 1.08 REMARK 500 HH21 ARG D 28 HB3 ALA D 144 1.10 REMARK 500 NH2 ARG D 28 HB3 ALA D 144 1.11 REMARK 500 HE ARG D 52 O HOH D 2034 1.57 REMARK 500 OH TYR A 88 HH TYR B 88 1.57 REMARK 500 HH11 ARG C 117 O HOH C 2045 1.57 REMARK 500 NH2 ARG D 28 CB ALA D 144 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH22 ARG A 130 O1 GOL A 1147 4445 1.13 REMARK 500 HH22 ARG A 130 HO1 GOL A 1147 4445 1.34 REMARK 500 NH2 ARG A 130 O1 GOL A 1147 4445 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO B 126 C GLU B 127 N -0.363 REMARK 500 GLU D 27 C ARG D 28 N -0.260 REMARK 500 ARG D 28 C PRO D 29 N 0.163 REMARK 500 LEU D 124 C LYS D 125 N -0.142 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 145 N - CA - CB ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG C 117 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG C 117 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 143 -79.97 -106.78 REMARK 500 THR B 25 76.86 -151.21 REMARK 500 ASP B 97 103.73 -59.34 REMARK 500 ASP B 133 77.05 -110.03 REMARK 500 GLN C 142 23.20 -78.58 REMARK 500 THR D 25 74.28 -158.68 REMARK 500 ASP D 97 105.45 -57.62 REMARK 500 ASP D 133 78.56 -107.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1146 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 47 OE1 REMARK 620 2 GLU A 50 OE1 78.5 REMARK 620 3 GLU A 79 OE1 103.2 82.8 REMARK 620 4 ASP A 82 OD2 100.8 177.3 94.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1146 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UMP A1145 OP1 REMARK 620 2 GLU B 46 OE2 87.3 REMARK 620 3 GLU B 47 OE2 92.9 92.2 REMARK 620 4 GLU B 50 OE2 172.8 87.4 92.0 REMARK 620 5 HOH B2088 O 87.2 82.8 175.0 87.4 REMARK 620 6 HOH B2089 O 87.8 167.2 99.9 96.4 85.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1147 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 47 OE1 REMARK 620 2 GLU B 50 OE1 94.9 REMARK 620 3 GLU B 79 OE1 114.9 80.8 REMARK 620 4 ASP B 82 OD2 94.9 169.9 97.2 REMARK 620 5 HOH B2089 O 97.8 76.3 141.4 100.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C1145 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 47 OE1 REMARK 620 2 GLU C 50 OE1 81.5 REMARK 620 3 GLU C 79 OE1 102.2 84.6 REMARK 620 4 ASP C 82 OD2 101.6 176.8 94.1 REMARK 620 5 HOH C2063 O 171.2 93.0 84.0 84.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1146 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UMP C1144 OP1 REMARK 620 2 GLU D 46 OE2 88.9 REMARK 620 3 GLU D 47 OE2 95.8 93.8 REMARK 620 4 GLU D 50 OE2 175.8 87.0 85.7 REMARK 620 5 HOH D2073 O 87.2 165.5 100.5 96.5 REMARK 620 6 HOH D2074 O 90.6 82.3 172.5 87.7 83.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1145 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 47 OE1 REMARK 620 2 GLU D 50 OE1 97.1 REMARK 620 3 GLU D 79 OE1 115.4 81.3 REMARK 620 4 ASP D 82 OD2 91.8 170.3 98.4 REMARK 620 5 HOH D2073 O 100.0 76.9 140.3 97.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UMP C 1144 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UMP A 1145 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1146 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1146 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1147 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 1145 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 1145 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 1146 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1147 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1146 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1147 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YEU RELATED DB: PDB REMARK 900 STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE REMARK 900 NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS REMARK 900 RADIODURANS, COMPLEX WITH GD REMARK 900 RELATED ID: 2YF3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF DR2231, THE MAZG-LIKE PROTEIN FROM DEINOCOCCUS REMARK 900 RADIODURANS, COMPLEX WITH MANGANESE REMARK 900 RELATED ID: 2YF9 RELATED DB: PDB REMARK 900 STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE REMARK 900 NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS REMARK 900 RADIODURANS, NATIVE FORM REMARK 900 RELATED ID: 2YF4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF DR2231, THE MAZG-LIKE PROTEIN FROM DEINOCOCCUS REMARK 900 RADIODURANS, APO STRUCTURE REMARK 900 RELATED ID: 2YFD RELATED DB: PDB REMARK 900 STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE REMARK 900 NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS REMARK 900 RADIODURANS, COMPLEXED WITH MG AND DUMP DBREF 2YFC A 1 148 UNP Q9RS96 Q9RS96_DEIRA 1 148 DBREF 2YFC B 1 148 UNP Q9RS96 Q9RS96_DEIRA 1 148 DBREF 2YFC C 1 148 UNP Q9RS96 Q9RS96_DEIRA 1 148 DBREF 2YFC D 1 148 UNP Q9RS96 Q9RS96_DEIRA 1 148 SEQADV 2YFC GLY A -5 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC ILE A -4 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC ASP A -3 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC PRO A -2 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC PHE A -1 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC THR A 0 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC GLY B -5 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC ILE B -4 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC ASP B -3 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC PRO B -2 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC PHE B -1 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC THR B 0 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC GLY C -5 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC ILE C -4 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC ASP C -3 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC PRO C -2 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC PHE C -1 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC THR C 0 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC GLY D -5 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC ILE D -4 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC ASP D -3 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC PRO D -2 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC PHE D -1 UNP Q9RS96 EXPRESSION TAG SEQADV 2YFC THR D 0 UNP Q9RS96 EXPRESSION TAG SEQRES 1 A 154 GLY ILE ASP PRO PHE THR MET SER ASP LEU PRO CYS PRO SEQRES 2 A 154 PRO THR ASN ALA GLU ARG LEU HIS GLU PHE HIS ARG ALA SEQRES 3 A 154 ILE GLY ALA ALA THR PRO GLU ARG PRO THR PRO PRO PRO SEQRES 4 A 154 PRO GLU LEU LEU ARG LEU ARG GLN THR LEU LEU ASP GLU SEQRES 5 A 154 GLU SER ALA GLU VAL ARG ALA GLU ILE ASP HIS LEU LEU SEQRES 6 A 154 ALA ARG GLN ALA ALA GLY GLU ALA LEU SER ALA GLY ASP SEQRES 7 A 154 LEU ALA PRO LEU ALA HIS GLU LEU ALA ASP LEU LEU TYR SEQRES 8 A 154 VAL THR TYR GLY ALA LEU ASP GLN LEU GLY ILE ASP ALA SEQRES 9 A 154 ASP ALA VAL PHE ALA GLU VAL HIS ARG ALA ASN LEU SER SEQRES 10 A 154 LYS ALA SER GLY PRO ARG ARG ALA ASP GLY LYS GLN LEU SEQRES 11 A 154 LYS PRO GLU GLY TRP ARG PRO ALA ASP VAL ARG GLY VAL SEQRES 12 A 154 ILE GLU ARG LEU GLN HIS ALA PRO ALA ASP ASP SEQRES 1 B 154 GLY ILE ASP PRO PHE THR MET SER ASP LEU PRO CYS PRO SEQRES 2 B 154 PRO THR ASN ALA GLU ARG LEU HIS GLU PHE HIS ARG ALA SEQRES 3 B 154 ILE GLY ALA ALA THR PRO GLU ARG PRO THR PRO PRO PRO SEQRES 4 B 154 PRO GLU LEU LEU ARG LEU ARG GLN THR LEU LEU ASP GLU SEQRES 5 B 154 GLU SER ALA GLU VAL ARG ALA GLU ILE ASP HIS LEU LEU SEQRES 6 B 154 ALA ARG GLN ALA ALA GLY GLU ALA LEU SER ALA GLY ASP SEQRES 7 B 154 LEU ALA PRO LEU ALA HIS GLU LEU ALA ASP LEU LEU TYR SEQRES 8 B 154 VAL THR TYR GLY ALA LEU ASP GLN LEU GLY ILE ASP ALA SEQRES 9 B 154 ASP ALA VAL PHE ALA GLU VAL HIS ARG ALA ASN LEU SER SEQRES 10 B 154 LYS ALA SER GLY PRO ARG ARG ALA ASP GLY LYS GLN LEU SEQRES 11 B 154 LYS PRO GLU GLY TRP ARG PRO ALA ASP VAL ARG GLY VAL SEQRES 12 B 154 ILE GLU ARG LEU GLN HIS ALA PRO ALA ASP ASP SEQRES 1 C 154 GLY ILE ASP PRO PHE THR MET SER ASP LEU PRO CYS PRO SEQRES 2 C 154 PRO THR ASN ALA GLU ARG LEU HIS GLU PHE HIS ARG ALA SEQRES 3 C 154 ILE GLY ALA ALA THR PRO GLU ARG PRO THR PRO PRO PRO SEQRES 4 C 154 PRO GLU LEU LEU ARG LEU ARG GLN THR LEU LEU ASP GLU SEQRES 5 C 154 GLU SER ALA GLU VAL ARG ALA GLU ILE ASP HIS LEU LEU SEQRES 6 C 154 ALA ARG GLN ALA ALA GLY GLU ALA LEU SER ALA GLY ASP SEQRES 7 C 154 LEU ALA PRO LEU ALA HIS GLU LEU ALA ASP LEU LEU TYR SEQRES 8 C 154 VAL THR TYR GLY ALA LEU ASP GLN LEU GLY ILE ASP ALA SEQRES 9 C 154 ASP ALA VAL PHE ALA GLU VAL HIS ARG ALA ASN LEU SER SEQRES 10 C 154 LYS ALA SER GLY PRO ARG ARG ALA ASP GLY LYS GLN LEU SEQRES 11 C 154 LYS PRO GLU GLY TRP ARG PRO ALA ASP VAL ARG GLY VAL SEQRES 12 C 154 ILE GLU ARG LEU GLN HIS ALA PRO ALA ASP ASP SEQRES 1 D 154 GLY ILE ASP PRO PHE THR MET SER ASP LEU PRO CYS PRO SEQRES 2 D 154 PRO THR ASN ALA GLU ARG LEU HIS GLU PHE HIS ARG ALA SEQRES 3 D 154 ILE GLY ALA ALA THR PRO GLU ARG PRO THR PRO PRO PRO SEQRES 4 D 154 PRO GLU LEU LEU ARG LEU ARG GLN THR LEU LEU ASP GLU SEQRES 5 D 154 GLU SER ALA GLU VAL ARG ALA GLU ILE ASP HIS LEU LEU SEQRES 6 D 154 ALA ARG GLN ALA ALA GLY GLU ALA LEU SER ALA GLY ASP SEQRES 7 D 154 LEU ALA PRO LEU ALA HIS GLU LEU ALA ASP LEU LEU TYR SEQRES 8 D 154 VAL THR TYR GLY ALA LEU ASP GLN LEU GLY ILE ASP ALA SEQRES 9 D 154 ASP ALA VAL PHE ALA GLU VAL HIS ARG ALA ASN LEU SER SEQRES 10 D 154 LYS ALA SER GLY PRO ARG ARG ALA ASP GLY LYS GLN LEU SEQRES 11 D 154 LYS PRO GLU GLY TRP ARG PRO ALA ASP VAL ARG GLY VAL SEQRES 12 D 154 ILE GLU ARG LEU GLN HIS ALA PRO ALA ASP ASP HET UMP A1145 31 HET MN A1146 1 HET GOL A1147 14 HET MN B1146 1 HET MN B1147 1 HET GOL B1148 14 HET UMP C1144 31 HET MN C1145 1 HET GOL C1146 14 HET GOL C1147 14 HET MN D1145 1 HET MN D1146 1 HETNAM UMP 2'-DEOXYURIDINE 5'-MONOPHOSPHATE HETNAM MN MANGANESE (II) ION HETNAM GOL GLYCEROL HETSYN UMP DUMP HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 UMP 2(C9 H13 N2 O8 P) FORMUL 6 MN 6(MN 2+) FORMUL 7 GOL 4(C3 H8 O3) FORMUL 17 HOH *314(H2 O) HELIX 1 1 THR A 9 ILE A 21 1 13 HELIX 2 2 PRO A 33 ALA A 64 1 32 HELIX 3 3 SER A 69 ASP A 72 5 4 HELIX 4 4 LEU A 73 LEU A 94 1 22 HELIX 5 5 ASP A 97 SER A 111 1 15 HELIX 6 6 ASP A 133 HIS A 143 1 11 HELIX 7 7 THR B 9 GLY B 22 1 14 HELIX 8 8 PRO B 33 ALA B 64 1 32 HELIX 9 9 SER B 69 ASP B 72 5 4 HELIX 10 10 LEU B 73 LEU B 94 1 22 HELIX 11 11 ASP B 97 ALA B 113 1 17 HELIX 12 12 ASP B 133 GLN B 142 1 10 HELIX 13 13 THR C 9 ILE C 21 1 13 HELIX 14 14 PRO C 33 ALA C 64 1 32 HELIX 15 15 SER C 69 ASP C 72 5 4 HELIX 16 16 LEU C 73 LEU C 94 1 22 HELIX 17 17 ASP C 97 SER C 111 1 15 HELIX 18 18 ASP C 133 GLN C 142 1 10 HELIX 19 19 THR D 9 GLY D 22 1 14 HELIX 20 20 PRO D 33 ALA D 64 1 32 HELIX 21 21 SER D 69 ASP D 72 5 4 HELIX 22 22 LEU D 73 LEU D 94 1 22 HELIX 23 23 ASP D 97 ALA D 113 1 17 HELIX 24 24 ASP D 133 HIS D 143 1 11 LINK OE1 GLU A 47 MN MN A1146 1555 1555 2.31 LINK OE1 GLU A 50 MN MN A1146 1555 1555 2.20 LINK OE1 GLU A 79 MN MN A1146 1555 1555 2.32 LINK OD2 ASP A 82 MN MN A1146 1555 1555 2.25 LINK OP1 UMP A1145 MN MN B1146 1555 1555 2.23 LINK OE2 GLU B 46 MN MN B1146 1555 1555 2.18 LINK OE2 GLU B 47 MN MN B1146 1555 1555 2.27 LINK OE1 GLU B 47 MN MN B1147 1555 1555 2.11 LINK OE2 GLU B 50 MN MN B1146 1555 1555 2.29 LINK OE1 GLU B 50 MN MN B1147 1555 1555 2.22 LINK OE1 GLU B 79 MN MN B1147 1555 1555 2.24 LINK OD2 ASP B 82 MN MN B1147 1555 1555 2.25 LINK MN MN B1146 O HOH B2088 1555 1555 2.42 LINK MN MN B1146 O HOH B2089 1555 1555 2.19 LINK MN MN B1147 O HOH B2089 1555 1555 2.12 LINK OE1 GLU C 47 MN MN C1145 1555 1555 2.30 LINK OE1 GLU C 50 MN MN C1145 1555 1555 2.05 LINK OE1 GLU C 79 MN MN C1145 1555 1555 2.27 LINK OD2 ASP C 82 MN MN C1145 1555 1555 2.23 LINK OP1 UMP C1144 MN MN D1146 1555 1555 2.19 LINK MN MN C1145 O HOH C2063 1555 1555 2.45 LINK OE2 GLU D 46 MN MN D1146 1555 1555 2.22 LINK OE1 GLU D 47 MN MN D1145 1555 1555 2.11 LINK OE2 GLU D 47 MN MN D1146 1555 1555 2.14 LINK OE1 GLU D 50 MN MN D1145 1555 1555 2.20 LINK OE2 GLU D 50 MN MN D1146 1555 1555 2.24 LINK OE1 GLU D 79 MN MN D1145 1555 1555 2.16 LINK OD2 ASP D 82 MN MN D1145 1555 1555 2.24 LINK MN MN D1145 O HOH D2073 1555 1555 2.19 LINK MN MN D1146 O HOH D2073 1555 1555 2.26 LINK MN MN D1146 O HOH D2074 1555 1555 2.49 SITE 1 AC1 20 VAL C 105 ASN C 109 LYS C 112 LYS C 122 SITE 2 AC1 20 GLN C 123 LYS C 125 HOH C2051 HOH C2058 SITE 3 AC1 20 HOH C2059 HOH C2060 HOH C2061 HOH C2062 SITE 4 AC1 20 PHE D 17 GLU D 46 GLU D 47 ASP D 82 SITE 5 AC1 20 TYR D 85 VAL D 86 MN D1146 HOH D2073 SITE 1 AC2 20 VAL A 105 ASN A 109 LYS A 112 LYS A 122 SITE 2 AC2 20 GLN A 123 LYS A 125 HOH A2080 HOH A2081 SITE 3 AC2 20 HOH A2082 HOH A2083 HOH A2084 HOH A2085 SITE 4 AC2 20 PHE B 17 GLU B 46 GLU B 47 ASP B 82 SITE 5 AC2 20 TYR B 85 VAL B 86 MN B1146 HOH B2089 SITE 1 AC3 4 GLU A 47 GLU A 50 GLU A 79 ASP A 82 SITE 1 AC4 7 UMP A1145 GLU B 46 GLU B 47 GLU B 50 SITE 2 AC4 7 MN B1147 HOH B2088 HOH B2089 SITE 1 AC5 6 GLU B 47 GLU B 50 GLU B 79 ASP B 82 SITE 2 AC5 6 MN B1146 HOH B2089 SITE 1 AC6 5 GLU C 47 GLU C 50 GLU C 79 ASP C 82 SITE 2 AC6 5 HOH C2063 SITE 1 AC7 6 GLU D 47 GLU D 50 GLU D 79 ASP D 82 SITE 2 AC7 6 MN D1146 HOH D2073 SITE 1 AC8 7 UMP C1144 GLU D 46 GLU D 47 GLU D 50 SITE 2 AC8 7 MN D1145 HOH D2073 HOH D2074 SITE 1 AC9 8 ASP A 120 GLU B 35 ARG B 38 HOH B2026 SITE 2 AC9 8 HOH B2090 HOH B2091 GLU D 35 ARG D 38 SITE 1 BC1 8 HIS A 57 ALA A 60 ARG A 61 ARG A 130 SITE 2 BC1 8 ASP C 133 ARG C 135 GLY C 136 GLU C 139 SITE 1 BC2 5 ALA C 132 ASP C 133 VAL C 134 ARG C 135 SITE 2 BC2 5 HIS D 78 SITE 1 BC3 4 GLU C 12 HIS C 15 GLU C 16 HOH C2064 CRYST1 78.733 150.191 52.423 90.00 90.00 90.00 P 21 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012701 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006658 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019076 0.00000 MTRIX1 1 0.997390 0.071890 0.006140 2.42830 1 MTRIX2 1 0.071920 -0.997400 -0.004920 -68.58492 1 MTRIX3 1 0.005770 0.005340 -0.999970 26.72167 1