data_2YGA # _entry.id 2YGA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YGA pdb_00002yga 10.2210/pdb2yga/pdb PDBE EBI-48012 ? ? WWPDB D_1290048012 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-16 2 'Structure model' 1 1 2012-03-21 3 'Structure model' 1 2 2013-02-06 4 'Structure model' 2 0 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' Other 10 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_database_status 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_atom_id' 6 4 'Structure model' '_atom_site.label_atom_id' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' 9 4 'Structure model' '_pdbx_database_status.status_code_sf' 10 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 11 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 12 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'GDM A 1215 WRONG CHIRALITY AT ATOM C14' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YGA _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-04-12 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1A4H unspecified 'STRUCTURE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE IN COMPLEX WITH GELDANAMYCIN' PDB 1HK7 unspecified 'MIDDLE DOMAIN OF HSP90' PDB 2XX5 unspecified 'MACROLACTONE INHIBITOR BOUND TO HSP90 N-TERM' PDB 1US7 unspecified 'COMPLEX OF HSP90 AND P50' PDB 2BRE unspecified 'STRUCTURE OF A HSP90 INHIBITOR BOUND TO THE N- TERMINUS OF YEAST HSP90.' PDB 2VWC unspecified 'STRUCTURE OF THE HSP90 INHIBITOR MACBECIN BOUND TO THE N-TERMINUS OF YEAST HSP90.' PDB 2CG9 unspecified 'CRYSTAL STRUCTURE OF AN HSP90-SBA1 CLOSED CHAPERONE COMPLEX' PDB 2XD6 unspecified 'HSP90 COMPLEXED WITH A RESORCYLIC ACID MACROLACTONE.' PDB 1AH6 unspecified 'STRUCTURE OF THE TETRAGONAL FORM OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE' PDB 1BGQ unspecified 'RADICICOL BOUND TO THE ATP BINDING SITE OF THE N- TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE' PDB 1USV unspecified 'THE STRUCTURE OF THE COMPLEX BETWEEN AHA1 AND HSP90' PDB 2IWS unspecified 'RADICICOL ANALOGUES BOUND TO THE ATP SITE OF HSP90' PDB 2WER unspecified 'YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH RADICICOL' PDB 1AMW unspecified 'ADP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE' PDB 1USU unspecified 'THE STRUCTURE OF THE COMPLEX BETWEEN AHA1 AND HSP90' PDB 2BRC unspecified 'STRUCTURE OF A HSP90 INHIBITOR BOUND TO THE N- TERMINUS OF YEAST HSP90.' PDB 1ZWH unspecified 'YEAST HSP82 IN COMPLEX WITH THE NOVEL HSP90 INHIBITORRADESTER AMINE' PDB 2VW5 unspecified 'STRUCTURE OF THE HSP90 INHIBITOR 7-O- CARBAMOYLPREMACBECIN BOUND TO THE N- TERMINUS OF YEAST HSP90' PDB 2WEQ unspecified 'YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH GELDANAMYCIN' PDB 1AH8 unspecified 'STRUCTURE OF THE ORTHORHOMBIC FORM OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE' PDB 2CGF unspecified 'A RADICICOL ANALOGUE BOUND TO THE ATP BINDING SITE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE' PDB 2XX4 unspecified 'MACROLACTONE INHIBITOR BOUND TO HSP90 N-TERM' PDB 2XX2 unspecified 'MACROLACTONE INHIBITOR BOUND TO HSP90 N-TERM' PDB 2IWU unspecified 'ANALOGUES OF RADICICOL BOUND TO THE ATP-BINDING SITE OF HSP90.' PDB 1AM1 unspecified 'ATP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE' PDB 2CGE unspecified 'CRYSTAL STRUCTURE OF AN HSP90-SBA1 CLOSED CHAPERONE COMPLEX' PDB 2IWX unspecified 'ANALOGUES OF RADICICOL BOUND TO THE ATP-BINDING SITE OF HSP90.' PDB 2WEP unspecified 'YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH ADP' PDB 2AKP unspecified 'HSP90 DELTA24-N210 MUTANT' PDB 1ZW9 unspecified ;YEAST HSP82 IN COMPLEX WITH THE NOVEL HSP90 INHIBITOR 8-(6-BROMO-BENZO[1,3]DIOXOL-5-YLSULFANYL)-9-(3- ISOPROPYLAMINO-PROPYL)-ADENINE ; # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Roe, S.M.' 1 'Prodromou, C.' 2 'Pearl, L.H.' 3 # _citation.id primary _citation.title ;Features of the Streptomyces Hygroscopicus Htpg Reveal How Partial Geldanamycin Resistance Can Arise with Mutation to the ATP Binding Pocket of a Eukaryotic Hsp90. ; _citation.journal_abbrev 'Faseb J.' _citation.journal_volume 25 _citation.page_first 3828 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM FAJOEC _citation.country US _citation.journal_id_ISSN 0892-6638 _citation.journal_id_CSD 2074 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21778327 _citation.pdbx_database_id_DOI 10.1096/FJ.11-188821 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Millson, S.H.' 1 ? primary 'Chua, C.' 2 ? primary 'Roe, S.M.' 3 ? primary 'Polier, S.' 4 ? primary 'Solovieva, S.' 5 ? primary 'Pearl, L.H.' 6 ? primary 'Sim, T.' 7 ? primary 'Prodromou, C.' 8 ? primary 'Piper, P.W.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ATP-DEPENDENT MOLECULAR CHAPERONE HSP82' 24800.393 1 ? YES 'N-TERMINUS, RESIDUES 1-220' ? 2 non-polymer syn GELDANAMYCIN 560.636 1 ? ? ? ? 3 water nat water 18.015 41 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '82 KDA HEAT SHOCK PROTEIN, HEAT SHOCK PROTEIN HSP90 HEAT-INDUCIBLE ISOFORM, HSP90' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDS GIGMTKAGLINLLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTL DEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIP ; _entity_poly.pdbx_seq_one_letter_code_can ;MASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDS GIGMTKAGLINLLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTL DEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GELDANAMYCIN GDM 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 GLU n 1 5 THR n 1 6 PHE n 1 7 GLU n 1 8 PHE n 1 9 GLN n 1 10 ALA n 1 11 GLU n 1 12 ILE n 1 13 THR n 1 14 GLN n 1 15 LEU n 1 16 MET n 1 17 SER n 1 18 LEU n 1 19 ILE n 1 20 ILE n 1 21 ASN n 1 22 THR n 1 23 VAL n 1 24 TYR n 1 25 SER n 1 26 ASN n 1 27 LYS n 1 28 GLU n 1 29 ILE n 1 30 PHE n 1 31 LEU n 1 32 ARG n 1 33 GLU n 1 34 LEU n 1 35 ILE n 1 36 SER n 1 37 ASN n 1 38 ALA n 1 39 SER n 1 40 ASP n 1 41 ALA n 1 42 LEU n 1 43 ASP n 1 44 LYS n 1 45 ILE n 1 46 ARG n 1 47 TYR n 1 48 LYS n 1 49 SER n 1 50 LEU n 1 51 SER n 1 52 ASP n 1 53 PRO n 1 54 LYS n 1 55 GLN n 1 56 LEU n 1 57 GLU n 1 58 THR n 1 59 GLU n 1 60 PRO n 1 61 ASP n 1 62 LEU n 1 63 PHE n 1 64 ILE n 1 65 ARG n 1 66 ILE n 1 67 THR n 1 68 PRO n 1 69 LYS n 1 70 PRO n 1 71 GLU n 1 72 GLN n 1 73 LYS n 1 74 VAL n 1 75 LEU n 1 76 GLU n 1 77 ILE n 1 78 ARG n 1 79 ASP n 1 80 SER n 1 81 GLY n 1 82 ILE n 1 83 GLY n 1 84 MET n 1 85 THR n 1 86 LYS n 1 87 ALA n 1 88 GLY n 1 89 LEU n 1 90 ILE n 1 91 ASN n 1 92 LEU n 1 93 LEU n 1 94 GLY n 1 95 THR n 1 96 ILE n 1 97 ALA n 1 98 LYS n 1 99 SER n 1 100 GLY n 1 101 THR n 1 102 LYS n 1 103 ALA n 1 104 PHE n 1 105 MET n 1 106 GLU n 1 107 ALA n 1 108 LEU n 1 109 SER n 1 110 ALA n 1 111 GLY n 1 112 ALA n 1 113 ASP n 1 114 VAL n 1 115 SER n 1 116 MET n 1 117 ILE n 1 118 GLY n 1 119 GLN n 1 120 PHE n 1 121 GLY n 1 122 VAL n 1 123 GLY n 1 124 PHE n 1 125 TYR n 1 126 SER n 1 127 LEU n 1 128 PHE n 1 129 LEU n 1 130 VAL n 1 131 ALA n 1 132 ASP n 1 133 ARG n 1 134 VAL n 1 135 GLN n 1 136 VAL n 1 137 ILE n 1 138 SER n 1 139 LYS n 1 140 SER n 1 141 ASN n 1 142 ASP n 1 143 ASP n 1 144 GLU n 1 145 GLN n 1 146 TYR n 1 147 ILE n 1 148 TRP n 1 149 GLU n 1 150 SER n 1 151 ASN n 1 152 ALA n 1 153 GLY n 1 154 GLY n 1 155 SER n 1 156 PHE n 1 157 THR n 1 158 VAL n 1 159 THR n 1 160 LEU n 1 161 ASP n 1 162 GLU n 1 163 VAL n 1 164 ASN n 1 165 GLU n 1 166 ARG n 1 167 ILE n 1 168 GLY n 1 169 ARG n 1 170 GLY n 1 171 THR n 1 172 ILE n 1 173 LEU n 1 174 ARG n 1 175 LEU n 1 176 PHE n 1 177 LEU n 1 178 LYS n 1 179 ASP n 1 180 ASP n 1 181 GLN n 1 182 LEU n 1 183 GLU n 1 184 TYR n 1 185 LEU n 1 186 GLU n 1 187 GLU n 1 188 LYS n 1 189 ARG n 1 190 ILE n 1 191 LYS n 1 192 GLU n 1 193 VAL n 1 194 ILE n 1 195 LYS n 1 196 ARG n 1 197 HIS n 1 198 SER n 1 199 GLU n 1 200 PHE n 1 201 VAL n 1 202 ALA n 1 203 TYR n 1 204 PRO n 1 205 ILE n 1 206 GLN n 1 207 LEU n 1 208 VAL n 1 209 VAL n 1 210 THR n 1 211 LYS n 1 212 GLU n 1 213 VAL n 1 214 GLU n 1 215 LYS n 1 216 GLU n 1 217 VAL n 1 218 PRO n 1 219 ILE n 1 220 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;BAKER'S YEAST ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SACCHAROMYCES CEREVISIAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GDM non-polymer . GELDANAMYCIN ? 'C29 H40 N2 O9' 560.636 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 MET 16 16 16 MET MET A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 MET 84 84 84 MET MET A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 PHE 124 124 124 PHE PHE A . n A 1 125 TYR 125 125 125 TYR TYR A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 GLU 144 144 144 GLU GLU A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ASP 180 180 180 ASP ASP A . n A 1 181 GLN 181 181 181 GLN GLN A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 TYR 184 184 184 TYR TYR A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 ARG 189 189 189 ARG ARG A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 ILE 194 194 194 ILE ILE A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 SER 198 198 198 SER SER A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 TYR 203 203 203 TYR TYR A . n A 1 204 PRO 204 204 204 PRO PRO A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 GLN 206 206 206 GLN GLN A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 THR 210 210 210 THR THR A . n A 1 211 LYS 211 211 211 LYS LYS A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 LYS 215 215 ? ? ? A . n A 1 216 GLU 216 216 ? ? ? A . n A 1 217 VAL 217 217 ? ? ? A . n A 1 218 PRO 218 218 ? ? ? A . n A 1 219 ILE 219 219 ? ? ? A . n A 1 220 PRO 220 220 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDM 1 1215 1215 GDM GDM A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 1 ? CG ? A MET 1 CG 2 1 Y 1 A MET 1 ? SD ? A MET 1 SD 3 1 Y 1 A MET 1 ? CE ? A MET 1 CE 4 1 Y 1 A VAL 23 ? CG1 ? A VAL 23 CG1 5 1 Y 1 A VAL 23 ? CG2 ? A VAL 23 CG2 6 1 Y 1 A LYS 54 ? CD ? A LYS 54 CD 7 1 Y 1 A LYS 54 ? CE ? A LYS 54 CE 8 1 Y 1 A LYS 54 ? NZ ? A LYS 54 NZ 9 1 Y 1 A ILE 96 ? CG1 ? A ILE 96 CG1 10 1 Y 1 A ILE 96 ? CG2 ? A ILE 96 CG2 11 1 Y 1 A ILE 96 ? CD1 ? A ILE 96 CD1 12 1 Y 1 A LYS 188 ? CG ? A LYS 188 CG 13 1 Y 1 A LYS 188 ? CD ? A LYS 188 CD 14 1 Y 1 A LYS 188 ? CE ? A LYS 188 CE 15 1 Y 1 A LYS 188 ? NZ ? A LYS 188 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 xia2 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 2YGA _cell.length_a 74.340 _cell.length_b 74.340 _cell.length_c 110.070 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YGA _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 # _exptl.entry_id 2YGA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_percent_sol 61 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 7' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2010-08-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97630 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength 0.97630 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YGA _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.37 _reflns.number_obs 13126 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.50 _reflns.B_iso_Wilson_estimate 52.92 _reflns.pdbx_redundancy 6.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.37 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.70 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.10 _reflns_shell.pdbx_redundancy 7.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YGA _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 23880 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.233 _refine.ls_d_res_high 2.370 _refine.ls_percent_reflns_obs 99.72 _refine.ls_R_factor_obs 0.1870 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1841 _refine.ls_R_factor_R_free 0.2446 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1176 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -7.7540 _refine.aniso_B[2][2] -7.7540 _refine.aniso_B[3][3] 15.5081 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.361 _refine.solvent_model_param_bsol 55.878 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.95 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'IN-HOUSE MODEL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.36 _refine.pdbx_overall_phase_error 23.82 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1681 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 41 _refine_hist.number_atoms_total 1762 _refine_hist.d_res_high 2.370 _refine_hist.d_res_low 44.233 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 1746 'X-RAY DIFFRACTION' ? f_angle_d 1.129 ? ? 2357 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.362 ? ? 660 'X-RAY DIFFRACTION' ? f_chiral_restr 0.073 ? ? 275 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 300 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.3701 2.4780 2846 0.2897 100.00 0.3578 . . 142 . . 'X-RAY DIFFRACTION' . 2.4780 2.6086 2802 0.2674 99.00 0.3417 . . 157 . . 'X-RAY DIFFRACTION' . 2.6086 2.7720 2831 0.2307 100.00 0.3128 . . 179 . . 'X-RAY DIFFRACTION' . 2.7720 2.9860 2847 0.1979 100.00 0.2421 . . 136 . . 'X-RAY DIFFRACTION' . 2.9860 3.2864 2809 0.1867 100.00 0.2677 . . 159 . . 'X-RAY DIFFRACTION' . 3.2864 3.7617 2881 0.1638 100.00 0.2545 . . 125 . . 'X-RAY DIFFRACTION' . 3.7617 4.7385 2851 0.1625 100.00 0.2251 . . 134 . . 'X-RAY DIFFRACTION' . 4.7385 44.2405 2837 0.1759 100.00 0.2037 . . 144 . . # _database_PDB_matrix.entry_id 2YGA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2YGA _struct.title 'E88G-N92L Mutant of N-Term HSP90 complexed with Geldanamycin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YGA _struct_keywords.pdbx_keywords CHAPERONE _struct_keywords.text CHAPERONE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HSP82_YEAST _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P02829 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YGA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02829 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 220 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 220 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YGA GLY A 88 ? UNP P02829 GLU 88 'engineered mutation' 88 1 1 2YGA LEU A 92 ? UNP P02829 ASN 92 'engineered mutation' 92 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3890 ? 1 MORE -29.7 ? 1 'SSA (A^2)' 18490 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 9 ? THR A 22 ? GLN A 9 THR A 22 1 ? 14 HELX_P HELX_P2 2 GLU A 28 ? SER A 49 ? GLU A 28 SER A 49 1 ? 22 HELX_P HELX_P3 3 LEU A 50 ? GLU A 59 ? LEU A 50 GLU A 59 5 ? 10 HELX_P HELX_P4 4 PRO A 70 ? GLN A 72 ? PRO A 70 GLN A 72 5 ? 3 HELX_P HELX_P5 5 THR A 85 ? LEU A 93 ? THR A 85 LEU A 93 1 ? 9 HELX_P HELX_P6 6 GLY A 100 ? ALA A 110 ? GLY A 100 ALA A 110 1 ? 11 HELX_P HELX_P7 7 ASP A 113 ? GLY A 121 ? ASP A 113 GLY A 121 5 ? 9 HELX_P HELX_P8 8 VAL A 122 ? LEU A 129 ? VAL A 122 LEU A 129 5 ? 8 HELX_P HELX_P9 9 ASP A 179 ? LEU A 185 ? ASP A 179 LEU A 185 5 ? 7 HELX_P HELX_P10 10 GLU A 186 ? SER A 198 ? GLU A 186 SER A 198 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AA 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 SER A 3 ? GLU A 7 ? SER A 3 GLU A 7 AA 2 SER A 155 ? LEU A 160 ? SER A 155 LEU A 160 AA 3 TYR A 146 ? SER A 150 ? TYR A 146 SER A 150 AA 4 ALA A 131 ? LYS A 139 ? ALA A 131 LYS A 139 AA 5 GLY A 170 ? LEU A 177 ? GLY A 170 LEU A 177 AA 6 VAL A 74 ? ASP A 79 ? VAL A 74 ASP A 79 AA 7 ILE A 64 ? LYS A 69 ? ILE A 64 LYS A 69 AA 8 ILE A 205 ? LEU A 207 ? ILE A 205 LEU A 207 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 6 ? N PHE A 6 O PHE A 156 ? O PHE A 156 AA 2 3 N THR A 159 ? N THR A 159 O ILE A 147 ? O ILE A 147 AA 3 4 N SER A 150 ? N SER A 150 O VAL A 134 ? O VAL A 134 AA 4 5 N LYS A 139 ? N LYS A 139 O GLY A 170 ? O GLY A 170 AA 5 6 N LEU A 175 ? N LEU A 175 O LEU A 75 ? O LEU A 75 AA 6 7 N ARG A 78 ? N ARG A 78 O ARG A 65 ? O ARG A 65 AA 7 8 N ILE A 66 ? N ILE A 66 O GLN A 206 ? O GLN A 206 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GDM _struct_site.pdbx_auth_seq_id 1215 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 19 _struct_site.details 'BINDING SITE FOR RESIDUE GDM A 1215' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 ASN A 37 ? ASN A 37 . ? 1_555 ? 2 AC1 19 ASP A 40 ? ASP A 40 . ? 1_555 ? 3 AC1 19 ALA A 41 ? ALA A 41 . ? 1_555 ? 4 AC1 19 LYS A 44 ? LYS A 44 . ? 1_555 ? 5 AC1 19 ASP A 79 ? ASP A 79 . ? 1_555 ? 6 AC1 19 ILE A 82 ? ILE A 82 . ? 1_555 ? 7 AC1 19 MET A 84 ? MET A 84 . ? 1_555 ? 8 AC1 19 LEU A 92 ? LEU A 92 . ? 1_555 ? 9 AC1 19 LEU A 93 ? LEU A 93 . ? 1_555 ? 10 AC1 19 LYS A 98 ? LYS A 98 . ? 1_555 ? 11 AC1 19 GLY A 121 ? GLY A 121 . ? 1_555 ? 12 AC1 19 VAL A 122 ? VAL A 122 . ? 1_555 ? 13 AC1 19 GLY A 123 ? GLY A 123 . ? 1_555 ? 14 AC1 19 PHE A 124 ? PHE A 124 . ? 1_555 ? 15 AC1 19 THR A 171 ? THR A 171 . ? 1_555 ? 16 AC1 19 HOH C . ? HOH A 2005 . ? 1_555 ? 17 AC1 19 HOH C . ? HOH A 2007 . ? 1_555 ? 18 AC1 19 HOH C . ? HOH A 2021 . ? 1_555 ? 19 AC1 19 HOH C . ? HOH A 2029 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A GLY 168 ? ? O A HOH 2011 ? ? 1.49 2 1 OE1 A GLU 28 ? ? HH22 A ARG 189 ? ? 1.51 3 1 O A ASN 164 ? ? HH21 A ARG 166 ? ? 1.56 4 1 OG1 A THR 22 ? ? H A VAL 23 ? ? 1.57 5 1 OD1 A ASP 43 ? ? HH A TYR 203 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 21 ? ? -94.93 -74.73 2 1 THR A 22 ? ? -70.32 -128.30 3 1 VAL A 23 ? ? 71.07 -92.19 4 1 TYR A 24 ? ? 64.12 175.48 5 1 SER A 25 ? ? 72.91 -106.62 6 1 ASN A 26 ? ? -73.58 49.41 7 1 ASP A 52 ? ? -173.38 70.58 8 1 GLU A 59 ? ? -178.67 87.23 9 1 SER A 80 ? ? -97.63 42.69 10 1 ALA A 152 ? ? 77.73 -16.92 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C14 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id GDM _pdbx_validate_chiral.auth_seq_id 1215 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 16.9400 _pdbx_refine_tls.origin_y -31.0888 _pdbx_refine_tls.origin_z 0.9374 _pdbx_refine_tls.T[1][1] 0.2801 _pdbx_refine_tls.T[2][2] 0.2131 _pdbx_refine_tls.T[3][3] 0.2055 _pdbx_refine_tls.T[1][2] 0.0094 _pdbx_refine_tls.T[1][3] 0.0015 _pdbx_refine_tls.T[2][3] 0.0085 _pdbx_refine_tls.L[1][1] 4.9403 _pdbx_refine_tls.L[2][2] 2.2391 _pdbx_refine_tls.L[3][3] 1.5286 _pdbx_refine_tls.L[1][2] -0.2983 _pdbx_refine_tls.L[1][3] -0.5489 _pdbx_refine_tls.L[2][3] 0.0485 _pdbx_refine_tls.S[1][1] -0.0014 _pdbx_refine_tls.S[1][2] -0.1914 _pdbx_refine_tls.S[1][3] -0.3447 _pdbx_refine_tls.S[2][1] 0.0491 _pdbx_refine_tls.S[2][2] 0.0046 _pdbx_refine_tls.S[2][3] -0.2754 _pdbx_refine_tls.S[3][1] 0.0293 _pdbx_refine_tls.S[3][2] 0.0942 _pdbx_refine_tls.S[3][3] 0.0017 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ALL # _pdbx_entry_details.entry_id 2YGA _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, GLU 88 TO GLY ENGINEERED RESIDUE IN CHAIN A, ASN 92 TO LEU ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 215 ? A LYS 215 2 1 Y 1 A GLU 216 ? A GLU 216 3 1 Y 1 A VAL 217 ? A VAL 217 4 1 Y 1 A PRO 218 ? A PRO 218 5 1 Y 1 A ILE 219 ? A ILE 219 6 1 Y 1 A PRO 220 ? A PRO 220 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GDM O1 O N N 74 GDM O2 O N N 75 GDM O3 O N N 76 GDM O4 O N N 77 GDM O5 O N N 78 GDM O6 O N N 79 GDM O7 O N N 80 GDM O8 O N N 81 GDM O9 O N N 82 GDM N1 N N N 83 GDM N2 N N N 84 GDM C1 C N N 85 GDM C2 C N N 86 GDM C3 C N N 87 GDM C4 C N N 88 GDM C5 C N N 89 GDM C6 C N S 90 GDM C7 C N S 91 GDM C8 C N N 92 GDM C9 C N N 93 GDM C10 C N S 94 GDM C11 C N R 95 GDM C12 C N S 96 GDM C13 C N N 97 GDM C14 C N R 98 GDM C15 C N N 99 GDM C16 C N N 100 GDM C17 C N N 101 GDM C18 C N N 102 GDM C19 C N N 103 GDM C20 C N N 104 GDM C21 C N N 105 GDM C22 C N N 106 GDM C23 C N N 107 GDM C24 C N N 108 GDM C25 C N N 109 GDM C26 C N N 110 GDM C27 C N N 111 GDM C28 C N N 112 GDM C29 C N N 113 GDM HO5 H N N 114 GDM HN1 H N N 115 GDM HN21 H N N 116 GDM HN22 H N N 117 GDM H3 H N N 118 GDM H4 H N N 119 GDM H5 H N N 120 GDM H6 H N N 121 GDM H7 H N N 122 GDM H9 H N N 123 GDM H10 H N N 124 GDM H11 H N N 125 GDM H12 H N N 126 GDM H131 H N N 127 GDM H132 H N N 128 GDM H14 H N N 129 GDM H151 H N N 130 GDM H152 H N N 131 GDM H19 H N N 132 GDM H221 H N N 133 GDM H222 H N N 134 GDM H223 H N N 135 GDM H231 H N N 136 GDM H232 H N N 137 GDM H233 H N N 138 GDM H251 H N N 139 GDM H252 H N N 140 GDM H253 H N N 141 GDM H261 H N N 142 GDM H262 H N N 143 GDM H263 H N N 144 GDM H271 H N N 145 GDM H272 H N N 146 GDM H273 H N N 147 GDM H281 H N N 148 GDM H282 H N N 149 GDM H283 H N N 150 GDM H291 H N N 151 GDM H292 H N N 152 GDM H293 H N N 153 GLN N N N N 154 GLN CA C N S 155 GLN C C N N 156 GLN O O N N 157 GLN CB C N N 158 GLN CG C N N 159 GLN CD C N N 160 GLN OE1 O N N 161 GLN NE2 N N N 162 GLN OXT O N N 163 GLN H H N N 164 GLN H2 H N N 165 GLN HA H N N 166 GLN HB2 H N N 167 GLN HB3 H N N 168 GLN HG2 H N N 169 GLN HG3 H N N 170 GLN HE21 H N N 171 GLN HE22 H N N 172 GLN HXT H N N 173 GLU N N N N 174 GLU CA C N S 175 GLU C C N N 176 GLU O O N N 177 GLU CB C N N 178 GLU CG C N N 179 GLU CD C N N 180 GLU OE1 O N N 181 GLU OE2 O N N 182 GLU OXT O N N 183 GLU H H N N 184 GLU H2 H N N 185 GLU HA H N N 186 GLU HB2 H N N 187 GLU HB3 H N N 188 GLU HG2 H N N 189 GLU HG3 H N N 190 GLU HE2 H N N 191 GLU HXT H N N 192 GLY N N N N 193 GLY CA C N N 194 GLY C C N N 195 GLY O O N N 196 GLY OXT O N N 197 GLY H H N N 198 GLY H2 H N N 199 GLY HA2 H N N 200 GLY HA3 H N N 201 GLY HXT H N N 202 HIS N N N N 203 HIS CA C N S 204 HIS C C N N 205 HIS O O N N 206 HIS CB C N N 207 HIS CG C Y N 208 HIS ND1 N Y N 209 HIS CD2 C Y N 210 HIS CE1 C Y N 211 HIS NE2 N Y N 212 HIS OXT O N N 213 HIS H H N N 214 HIS H2 H N N 215 HIS HA H N N 216 HIS HB2 H N N 217 HIS HB3 H N N 218 HIS HD1 H N N 219 HIS HD2 H N N 220 HIS HE1 H N N 221 HIS HE2 H N N 222 HIS HXT H N N 223 HOH O O N N 224 HOH H1 H N N 225 HOH H2 H N N 226 ILE N N N N 227 ILE CA C N S 228 ILE C C N N 229 ILE O O N N 230 ILE CB C N S 231 ILE CG1 C N N 232 ILE CG2 C N N 233 ILE CD1 C N N 234 ILE OXT O N N 235 ILE H H N N 236 ILE H2 H N N 237 ILE HA H N N 238 ILE HB H N N 239 ILE HG12 H N N 240 ILE HG13 H N N 241 ILE HG21 H N N 242 ILE HG22 H N N 243 ILE HG23 H N N 244 ILE HD11 H N N 245 ILE HD12 H N N 246 ILE HD13 H N N 247 ILE HXT H N N 248 LEU N N N N 249 LEU CA C N S 250 LEU C C N N 251 LEU O O N N 252 LEU CB C N N 253 LEU CG C N N 254 LEU CD1 C N N 255 LEU CD2 C N N 256 LEU OXT O N N 257 LEU H H N N 258 LEU H2 H N N 259 LEU HA H N N 260 LEU HB2 H N N 261 LEU HB3 H N N 262 LEU HG H N N 263 LEU HD11 H N N 264 LEU HD12 H N N 265 LEU HD13 H N N 266 LEU HD21 H N N 267 LEU HD22 H N N 268 LEU HD23 H N N 269 LEU HXT H N N 270 LYS N N N N 271 LYS CA C N S 272 LYS C C N N 273 LYS O O N N 274 LYS CB C N N 275 LYS CG C N N 276 LYS CD C N N 277 LYS CE C N N 278 LYS NZ N N N 279 LYS OXT O N N 280 LYS H H N N 281 LYS H2 H N N 282 LYS HA H N N 283 LYS HB2 H N N 284 LYS HB3 H N N 285 LYS HG2 H N N 286 LYS HG3 H N N 287 LYS HD2 H N N 288 LYS HD3 H N N 289 LYS HE2 H N N 290 LYS HE3 H N N 291 LYS HZ1 H N N 292 LYS HZ2 H N N 293 LYS HZ3 H N N 294 LYS HXT H N N 295 MET N N N N 296 MET CA C N S 297 MET C C N N 298 MET O O N N 299 MET CB C N N 300 MET CG C N N 301 MET SD S N N 302 MET CE C N N 303 MET OXT O N N 304 MET H H N N 305 MET H2 H N N 306 MET HA H N N 307 MET HB2 H N N 308 MET HB3 H N N 309 MET HG2 H N N 310 MET HG3 H N N 311 MET HE1 H N N 312 MET HE2 H N N 313 MET HE3 H N N 314 MET HXT H N N 315 PHE N N N N 316 PHE CA C N S 317 PHE C C N N 318 PHE O O N N 319 PHE CB C N N 320 PHE CG C Y N 321 PHE CD1 C Y N 322 PHE CD2 C Y N 323 PHE CE1 C Y N 324 PHE CE2 C Y N 325 PHE CZ C Y N 326 PHE OXT O N N 327 PHE H H N N 328 PHE H2 H N N 329 PHE HA H N N 330 PHE HB2 H N N 331 PHE HB3 H N N 332 PHE HD1 H N N 333 PHE HD2 H N N 334 PHE HE1 H N N 335 PHE HE2 H N N 336 PHE HZ H N N 337 PHE HXT H N N 338 PRO N N N N 339 PRO CA C N S 340 PRO C C N N 341 PRO O O N N 342 PRO CB C N N 343 PRO CG C N N 344 PRO CD C N N 345 PRO OXT O N N 346 PRO H H N N 347 PRO HA H N N 348 PRO HB2 H N N 349 PRO HB3 H N N 350 PRO HG2 H N N 351 PRO HG3 H N N 352 PRO HD2 H N N 353 PRO HD3 H N N 354 PRO HXT H N N 355 SER N N N N 356 SER CA C N S 357 SER C C N N 358 SER O O N N 359 SER CB C N N 360 SER OG O N N 361 SER OXT O N N 362 SER H H N N 363 SER H2 H N N 364 SER HA H N N 365 SER HB2 H N N 366 SER HB3 H N N 367 SER HG H N N 368 SER HXT H N N 369 THR N N N N 370 THR CA C N S 371 THR C C N N 372 THR O O N N 373 THR CB C N R 374 THR OG1 O N N 375 THR CG2 C N N 376 THR OXT O N N 377 THR H H N N 378 THR H2 H N N 379 THR HA H N N 380 THR HB H N N 381 THR HG1 H N N 382 THR HG21 H N N 383 THR HG22 H N N 384 THR HG23 H N N 385 THR HXT H N N 386 TRP N N N N 387 TRP CA C N S 388 TRP C C N N 389 TRP O O N N 390 TRP CB C N N 391 TRP CG C Y N 392 TRP CD1 C Y N 393 TRP CD2 C Y N 394 TRP NE1 N Y N 395 TRP CE2 C Y N 396 TRP CE3 C Y N 397 TRP CZ2 C Y N 398 TRP CZ3 C Y N 399 TRP CH2 C Y N 400 TRP OXT O N N 401 TRP H H N N 402 TRP H2 H N N 403 TRP HA H N N 404 TRP HB2 H N N 405 TRP HB3 H N N 406 TRP HD1 H N N 407 TRP HE1 H N N 408 TRP HE3 H N N 409 TRP HZ2 H N N 410 TRP HZ3 H N N 411 TRP HH2 H N N 412 TRP HXT H N N 413 TYR N N N N 414 TYR CA C N S 415 TYR C C N N 416 TYR O O N N 417 TYR CB C N N 418 TYR CG C Y N 419 TYR CD1 C Y N 420 TYR CD2 C Y N 421 TYR CE1 C Y N 422 TYR CE2 C Y N 423 TYR CZ C Y N 424 TYR OH O N N 425 TYR OXT O N N 426 TYR H H N N 427 TYR H2 H N N 428 TYR HA H N N 429 TYR HB2 H N N 430 TYR HB3 H N N 431 TYR HD1 H N N 432 TYR HD2 H N N 433 TYR HE1 H N N 434 TYR HE2 H N N 435 TYR HH H N N 436 TYR HXT H N N 437 VAL N N N N 438 VAL CA C N S 439 VAL C C N N 440 VAL O O N N 441 VAL CB C N N 442 VAL CG1 C N N 443 VAL CG2 C N N 444 VAL OXT O N N 445 VAL H H N N 446 VAL H2 H N N 447 VAL HA H N N 448 VAL HB H N N 449 VAL HG11 H N N 450 VAL HG12 H N N 451 VAL HG13 H N N 452 VAL HG21 H N N 453 VAL HG22 H N N 454 VAL HG23 H N N 455 VAL HXT H N N 456 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GDM O1 C1 doub N N 70 GDM O2 C6 sing N N 71 GDM O2 C23 sing N N 72 GDM O3 C7 sing N N 73 GDM O3 C24 sing N N 74 GDM O4 C24 doub N N 75 GDM O5 C11 sing N N 76 GDM O5 HO5 sing N N 77 GDM O6 C12 sing N N 78 GDM O6 C27 sing N N 79 GDM O7 C17 sing N N 80 GDM O7 C29 sing N N 81 GDM O8 C18 doub N N 82 GDM O9 C21 doub N N 83 GDM N1 C1 sing N N 84 GDM N1 C20 sing N N 85 GDM N1 HN1 sing N N 86 GDM N2 C24 sing N N 87 GDM N2 HN21 sing N N 88 GDM N2 HN22 sing N N 89 GDM C1 C2 sing N N 90 GDM C2 C3 doub N E 91 GDM C2 C22 sing N N 92 GDM C3 C4 sing N N 93 GDM C3 H3 sing N N 94 GDM C4 C5 doub N Z 95 GDM C4 H4 sing N N 96 GDM C5 C6 sing N N 97 GDM C5 H5 sing N N 98 GDM C6 C7 sing N N 99 GDM C6 H6 sing N N 100 GDM C7 C8 sing N N 101 GDM C7 H7 sing N N 102 GDM C8 C9 doub N E 103 GDM C8 C25 sing N N 104 GDM C9 C10 sing N N 105 GDM C9 H9 sing N N 106 GDM C10 C11 sing N N 107 GDM C10 C26 sing N N 108 GDM C10 H10 sing N N 109 GDM C11 C12 sing N N 110 GDM C11 H11 sing N N 111 GDM C12 C13 sing N N 112 GDM C12 H12 sing N N 113 GDM C13 C14 sing N N 114 GDM C13 H131 sing N N 115 GDM C13 H132 sing N N 116 GDM C14 C15 sing N N 117 GDM C14 C28 sing N N 118 GDM C14 H14 sing N N 119 GDM C15 C16 sing N N 120 GDM C15 H151 sing N N 121 GDM C15 H152 sing N N 122 GDM C16 C17 doub N N 123 GDM C16 C21 sing N N 124 GDM C17 C18 sing N N 125 GDM C18 C19 sing N N 126 GDM C19 C20 doub N N 127 GDM C19 H19 sing N N 128 GDM C20 C21 sing N N 129 GDM C22 H221 sing N N 130 GDM C22 H222 sing N N 131 GDM C22 H223 sing N N 132 GDM C23 H231 sing N N 133 GDM C23 H232 sing N N 134 GDM C23 H233 sing N N 135 GDM C25 H251 sing N N 136 GDM C25 H252 sing N N 137 GDM C25 H253 sing N N 138 GDM C26 H261 sing N N 139 GDM C26 H262 sing N N 140 GDM C26 H263 sing N N 141 GDM C27 H271 sing N N 142 GDM C27 H272 sing N N 143 GDM C27 H273 sing N N 144 GDM C28 H281 sing N N 145 GDM C28 H282 sing N N 146 GDM C28 H283 sing N N 147 GDM C29 H291 sing N N 148 GDM C29 H292 sing N N 149 GDM C29 H293 sing N N 150 GLN N CA sing N N 151 GLN N H sing N N 152 GLN N H2 sing N N 153 GLN CA C sing N N 154 GLN CA CB sing N N 155 GLN CA HA sing N N 156 GLN C O doub N N 157 GLN C OXT sing N N 158 GLN CB CG sing N N 159 GLN CB HB2 sing N N 160 GLN CB HB3 sing N N 161 GLN CG CD sing N N 162 GLN CG HG2 sing N N 163 GLN CG HG3 sing N N 164 GLN CD OE1 doub N N 165 GLN CD NE2 sing N N 166 GLN NE2 HE21 sing N N 167 GLN NE2 HE22 sing N N 168 GLN OXT HXT sing N N 169 GLU N CA sing N N 170 GLU N H sing N N 171 GLU N H2 sing N N 172 GLU CA C sing N N 173 GLU CA CB sing N N 174 GLU CA HA sing N N 175 GLU C O doub N N 176 GLU C OXT sing N N 177 GLU CB CG sing N N 178 GLU CB HB2 sing N N 179 GLU CB HB3 sing N N 180 GLU CG CD sing N N 181 GLU CG HG2 sing N N 182 GLU CG HG3 sing N N 183 GLU CD OE1 doub N N 184 GLU CD OE2 sing N N 185 GLU OE2 HE2 sing N N 186 GLU OXT HXT sing N N 187 GLY N CA sing N N 188 GLY N H sing N N 189 GLY N H2 sing N N 190 GLY CA C sing N N 191 GLY CA HA2 sing N N 192 GLY CA HA3 sing N N 193 GLY C O doub N N 194 GLY C OXT sing N N 195 GLY OXT HXT sing N N 196 HIS N CA sing N N 197 HIS N H sing N N 198 HIS N H2 sing N N 199 HIS CA C sing N N 200 HIS CA CB sing N N 201 HIS CA HA sing N N 202 HIS C O doub N N 203 HIS C OXT sing N N 204 HIS CB CG sing N N 205 HIS CB HB2 sing N N 206 HIS CB HB3 sing N N 207 HIS CG ND1 sing Y N 208 HIS CG CD2 doub Y N 209 HIS ND1 CE1 doub Y N 210 HIS ND1 HD1 sing N N 211 HIS CD2 NE2 sing Y N 212 HIS CD2 HD2 sing N N 213 HIS CE1 NE2 sing Y N 214 HIS CE1 HE1 sing N N 215 HIS NE2 HE2 sing N N 216 HIS OXT HXT sing N N 217 HOH O H1 sing N N 218 HOH O H2 sing N N 219 ILE N CA sing N N 220 ILE N H sing N N 221 ILE N H2 sing N N 222 ILE CA C sing N N 223 ILE CA CB sing N N 224 ILE CA HA sing N N 225 ILE C O doub N N 226 ILE C OXT sing N N 227 ILE CB CG1 sing N N 228 ILE CB CG2 sing N N 229 ILE CB HB sing N N 230 ILE CG1 CD1 sing N N 231 ILE CG1 HG12 sing N N 232 ILE CG1 HG13 sing N N 233 ILE CG2 HG21 sing N N 234 ILE CG2 HG22 sing N N 235 ILE CG2 HG23 sing N N 236 ILE CD1 HD11 sing N N 237 ILE CD1 HD12 sing N N 238 ILE CD1 HD13 sing N N 239 ILE OXT HXT sing N N 240 LEU N CA sing N N 241 LEU N H sing N N 242 LEU N H2 sing N N 243 LEU CA C sing N N 244 LEU CA CB sing N N 245 LEU CA HA sing N N 246 LEU C O doub N N 247 LEU C OXT sing N N 248 LEU CB CG sing N N 249 LEU CB HB2 sing N N 250 LEU CB HB3 sing N N 251 LEU CG CD1 sing N N 252 LEU CG CD2 sing N N 253 LEU CG HG sing N N 254 LEU CD1 HD11 sing N N 255 LEU CD1 HD12 sing N N 256 LEU CD1 HD13 sing N N 257 LEU CD2 HD21 sing N N 258 LEU CD2 HD22 sing N N 259 LEU CD2 HD23 sing N N 260 LEU OXT HXT sing N N 261 LYS N CA sing N N 262 LYS N H sing N N 263 LYS N H2 sing N N 264 LYS CA C sing N N 265 LYS CA CB sing N N 266 LYS CA HA sing N N 267 LYS C O doub N N 268 LYS C OXT sing N N 269 LYS CB CG sing N N 270 LYS CB HB2 sing N N 271 LYS CB HB3 sing N N 272 LYS CG CD sing N N 273 LYS CG HG2 sing N N 274 LYS CG HG3 sing N N 275 LYS CD CE sing N N 276 LYS CD HD2 sing N N 277 LYS CD HD3 sing N N 278 LYS CE NZ sing N N 279 LYS CE HE2 sing N N 280 LYS CE HE3 sing N N 281 LYS NZ HZ1 sing N N 282 LYS NZ HZ2 sing N N 283 LYS NZ HZ3 sing N N 284 LYS OXT HXT sing N N 285 MET N CA sing N N 286 MET N H sing N N 287 MET N H2 sing N N 288 MET CA C sing N N 289 MET CA CB sing N N 290 MET CA HA sing N N 291 MET C O doub N N 292 MET C OXT sing N N 293 MET CB CG sing N N 294 MET CB HB2 sing N N 295 MET CB HB3 sing N N 296 MET CG SD sing N N 297 MET CG HG2 sing N N 298 MET CG HG3 sing N N 299 MET SD CE sing N N 300 MET CE HE1 sing N N 301 MET CE HE2 sing N N 302 MET CE HE3 sing N N 303 MET OXT HXT sing N N 304 PHE N CA sing N N 305 PHE N H sing N N 306 PHE N H2 sing N N 307 PHE CA C sing N N 308 PHE CA CB sing N N 309 PHE CA HA sing N N 310 PHE C O doub N N 311 PHE C OXT sing N N 312 PHE CB CG sing N N 313 PHE CB HB2 sing N N 314 PHE CB HB3 sing N N 315 PHE CG CD1 doub Y N 316 PHE CG CD2 sing Y N 317 PHE CD1 CE1 sing Y N 318 PHE CD1 HD1 sing N N 319 PHE CD2 CE2 doub Y N 320 PHE CD2 HD2 sing N N 321 PHE CE1 CZ doub Y N 322 PHE CE1 HE1 sing N N 323 PHE CE2 CZ sing Y N 324 PHE CE2 HE2 sing N N 325 PHE CZ HZ sing N N 326 PHE OXT HXT sing N N 327 PRO N CA sing N N 328 PRO N CD sing N N 329 PRO N H sing N N 330 PRO CA C sing N N 331 PRO CA CB sing N N 332 PRO CA HA sing N N 333 PRO C O doub N N 334 PRO C OXT sing N N 335 PRO CB CG sing N N 336 PRO CB HB2 sing N N 337 PRO CB HB3 sing N N 338 PRO CG CD sing N N 339 PRO CG HG2 sing N N 340 PRO CG HG3 sing N N 341 PRO CD HD2 sing N N 342 PRO CD HD3 sing N N 343 PRO OXT HXT sing N N 344 SER N CA sing N N 345 SER N H sing N N 346 SER N H2 sing N N 347 SER CA C sing N N 348 SER CA CB sing N N 349 SER CA HA sing N N 350 SER C O doub N N 351 SER C OXT sing N N 352 SER CB OG sing N N 353 SER CB HB2 sing N N 354 SER CB HB3 sing N N 355 SER OG HG sing N N 356 SER OXT HXT sing N N 357 THR N CA sing N N 358 THR N H sing N N 359 THR N H2 sing N N 360 THR CA C sing N N 361 THR CA CB sing N N 362 THR CA HA sing N N 363 THR C O doub N N 364 THR C OXT sing N N 365 THR CB OG1 sing N N 366 THR CB CG2 sing N N 367 THR CB HB sing N N 368 THR OG1 HG1 sing N N 369 THR CG2 HG21 sing N N 370 THR CG2 HG22 sing N N 371 THR CG2 HG23 sing N N 372 THR OXT HXT sing N N 373 TRP N CA sing N N 374 TRP N H sing N N 375 TRP N H2 sing N N 376 TRP CA C sing N N 377 TRP CA CB sing N N 378 TRP CA HA sing N N 379 TRP C O doub N N 380 TRP C OXT sing N N 381 TRP CB CG sing N N 382 TRP CB HB2 sing N N 383 TRP CB HB3 sing N N 384 TRP CG CD1 doub Y N 385 TRP CG CD2 sing Y N 386 TRP CD1 NE1 sing Y N 387 TRP CD1 HD1 sing N N 388 TRP CD2 CE2 doub Y N 389 TRP CD2 CE3 sing Y N 390 TRP NE1 CE2 sing Y N 391 TRP NE1 HE1 sing N N 392 TRP CE2 CZ2 sing Y N 393 TRP CE3 CZ3 doub Y N 394 TRP CE3 HE3 sing N N 395 TRP CZ2 CH2 doub Y N 396 TRP CZ2 HZ2 sing N N 397 TRP CZ3 CH2 sing Y N 398 TRP CZ3 HZ3 sing N N 399 TRP CH2 HH2 sing N N 400 TRP OXT HXT sing N N 401 TYR N CA sing N N 402 TYR N H sing N N 403 TYR N H2 sing N N 404 TYR CA C sing N N 405 TYR CA CB sing N N 406 TYR CA HA sing N N 407 TYR C O doub N N 408 TYR C OXT sing N N 409 TYR CB CG sing N N 410 TYR CB HB2 sing N N 411 TYR CB HB3 sing N N 412 TYR CG CD1 doub Y N 413 TYR CG CD2 sing Y N 414 TYR CD1 CE1 sing Y N 415 TYR CD1 HD1 sing N N 416 TYR CD2 CE2 doub Y N 417 TYR CD2 HD2 sing N N 418 TYR CE1 CZ doub Y N 419 TYR CE1 HE1 sing N N 420 TYR CE2 CZ sing Y N 421 TYR CE2 HE2 sing N N 422 TYR CZ OH sing N N 423 TYR OH HH sing N N 424 TYR OXT HXT sing N N 425 VAL N CA sing N N 426 VAL N H sing N N 427 VAL N H2 sing N N 428 VAL CA C sing N N 429 VAL CA CB sing N N 430 VAL CA HA sing N N 431 VAL C O doub N N 432 VAL C OXT sing N N 433 VAL CB CG1 sing N N 434 VAL CB CG2 sing N N 435 VAL CB HB sing N N 436 VAL CG1 HG11 sing N N 437 VAL CG1 HG12 sing N N 438 VAL CG1 HG13 sing N N 439 VAL CG2 HG21 sing N N 440 VAL CG2 HG22 sing N N 441 VAL CG2 HG23 sing N N 442 VAL OXT HXT sing N N 443 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'IN-HOUSE MODEL' # _atom_sites.entry_id 2YGA _atom_sites.fract_transf_matrix[1][1] 0.013452 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013452 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009085 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_