data_2YGF # _entry.id 2YGF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YGF pdb_00002ygf 10.2210/pdb2ygf/pdb PDBE EBI-48027 ? ? WWPDB D_1290048027 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-16 2 'Structure model' 1 1 2012-03-21 3 'Structure model' 1 2 2013-02-06 4 'Structure model' 2 0 2017-06-28 5 'Structure model' 2 1 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Atomic model' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' Other 10 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' database_PDB_caveat 3 4 'Structure model' diffrn_source 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_database_status 8 5 'Structure model' pdbx_initial_refinement_model 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_atom_id' 6 4 'Structure model' '_atom_site.label_atom_id' 7 4 'Structure model' '_diffrn_source.type' 8 5 'Structure model' '_database_2.pdbx_DOI' 9 5 'Structure model' '_database_2.pdbx_database_accession' 10 5 'Structure model' '_pdbx_database_status.status_code_sf' 11 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 12 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 13 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'GDM A 1215 HAS WRONG CHIRALITY AT ATOM C14' 2 'GDM A 1215 WRONG CHIRALITY AT ATOM C14' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YGF _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-04-14 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1HK7 unspecified 'MIDDLE DOMAIN OF HSP90' PDB 2XX5 unspecified 'MACROLACTONE INHIBITOR BOUND TO HSP90 N-TERM' PDB 1A4H unspecified 'STRUCTURE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE IN COMPLEX WITH GELDANAMYCIN' PDB 1US7 unspecified 'COMPLEX OF HSP90 AND P50' PDB 2BRE unspecified 'STRUCTURE OF A HSP90 INHIBITOR BOUND TO THE N- TERMINUS OF YEAST HSP90.' PDB 2VWC unspecified 'STRUCTURE OF THE HSP90 INHIBITOR MACBECIN BOUND TO THE N-TERMINUS OF YEAST HSP90.' PDB 2CG9 unspecified 'CRYSTAL STRUCTURE OF AN HSP90-SBA1 CLOSED CHAPERONE COMPLEX' PDB 2XD6 unspecified 'HSP90 COMPLEXED WITH A RESORCYLIC ACID MACROLACTONE.' PDB 2YGA unspecified 'E88G-N92L MUTANT OF N-TERM HSP90 COMPLEXED WITH GELDANAMYCIN' PDB 2YGE unspecified 'E88G-N92L MUTANT OF N-TERM HSP90 COMPLEXED WITH GELDANAMYCIN' PDB 1AH6 unspecified 'STRUCTURE OF THE TETRAGONAL FORM OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE' PDB 1BGQ unspecified 'RADICICOL BOUND TO THE ATP BINDING SITE OF THE N- TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE' PDB 1USV unspecified 'THE STRUCTURE OF THE COMPLEX BETWEEN AHA1 AND HSP90' PDB 2IWS unspecified 'RADICICOL ANALOGUES BOUND TO THE ATP SITE OF HSP90' PDB 2WER unspecified 'YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH RADICICOL' PDB 1AMW unspecified 'ADP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE' PDB 1USU unspecified 'THE STRUCTURE OF THE COMPLEX BETWEEN AHA1 AND HSP90' PDB 2BRC unspecified 'STRUCTURE OF A HSP90 INHIBITOR BOUND TO THE N- TERMINUS OF YEAST HSP90.' PDB 1ZWH unspecified 'YEAST HSP82 IN COMPLEX WITH THE NOVEL HSP90 INHIBITORRADESTER AMINE' PDB 2VW5 unspecified 'STRUCTURE OF THE HSP90 INHIBITOR 7-O- CARBAMOYLPREMACBECIN BOUND TO THE N- TERMINUS OF YEAST HSP90' PDB 2WEQ unspecified 'YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH GELDANAMYCIN' PDB 1AH8 unspecified 'STRUCTURE OF THE ORTHORHOMBIC FORM OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE' PDB 2CGF unspecified 'A RADICICOL ANALOGUE BOUND TO THE ATP BINDING SITE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE' PDB 2XX4 unspecified 'MACROLACTONE INHIBITOR BOUND TO HSP90 N-TERM' PDB 2XX2 unspecified 'MACROLACTONE INHIBITOR BOUND TO HSP90 N-TERM' PDB 2IWU unspecified 'ANALOGUES OF RADICICOL BOUND TO THE ATP-BINDING SITE OF HSP90.' PDB 1AM1 unspecified 'ATP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE' PDB 2CGE unspecified 'CRYSTAL STRUCTURE OF AN HSP90-SBA1 CLOSED CHAPERONE COMPLEX' PDB 2IWX unspecified 'ANALOGUES OF RADICICOL BOUND TO THE ATP-BINDING SITE OF HSP90.' PDB 1ZW9 unspecified ;YEAST HSP82 IN COMPLEX WITH THE NOVEL HSP90 INHIBITOR 8-(6-BROMO-BENZO[1,3]DIOXOL-5-YLSULFANYL)-9-(3- ISOPROPYLAMINO-PROPYL)-ADENINE ; PDB 2AKP unspecified 'HSP90 DELTA24-N210 MUTANT' PDB 2WEP unspecified 'YEAST HSP90 N-TERMINAL DOMAIN LI-IV MUTANT WITH ADP' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Roe, M.' 1 'Prodromou, C.' 2 'Pearl, L.H.' 3 # _citation.id primary _citation.title ;Features of the Streptomyces Hygroscopicus Htpg Reveal How Partial Geldanamycin Resistance Can Arise by Mutation to the ATP Binding Pocket of a Eukaryotic Hsp90. ; _citation.journal_abbrev 'Faseb J.' _citation.journal_volume 25 _citation.page_first 3828 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM FAJOEC _citation.country US _citation.journal_id_ISSN 0892-6638 _citation.journal_id_CSD 2074 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21778327 _citation.pdbx_database_id_DOI 10.1096/FJ.11-188821 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Millson, S.H.' 1 ? primary 'Chua, C.S.' 2 ? primary 'Solovieva, S.' 3 ? primary 'Roe, M.' 4 ? primary 'Polier, S.' 5 ? primary 'Pearl, L.H.' 6 ? primary 'Sim, T.S.' 7 ? primary 'Prodromou, C.' 8 ? primary 'Piper, P.W.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ATP-DEPENDENT MOLECULAR CHAPERONE HSP82' 24891.438 1 ? YES 'N-TERMINUS, RESIDUES 1-220' ? 2 non-polymer syn GELDANAMYCIN 560.636 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 148 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '82 KDA HEAT SHOCK PROTEIN, HEAT SHOCK PROTEIN HSP90 HEAT-INDUCIBLE ISOFORM, HSP90' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDS GIGMTKAEVINNIGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQMISKSNDDEQYIWESNAGGSFTVTL DEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIP ; _entity_poly.pdbx_seq_one_letter_code_can ;MASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDS GIGMTKAEVINNIGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQMISKSNDDEQYIWESNAGGSFTVTL DEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GELDANAMYCIN GDM 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 GLU n 1 5 THR n 1 6 PHE n 1 7 GLU n 1 8 PHE n 1 9 GLN n 1 10 ALA n 1 11 GLU n 1 12 ILE n 1 13 THR n 1 14 GLN n 1 15 LEU n 1 16 MET n 1 17 SER n 1 18 LEU n 1 19 ILE n 1 20 ILE n 1 21 ASN n 1 22 THR n 1 23 VAL n 1 24 TYR n 1 25 SER n 1 26 ASN n 1 27 LYS n 1 28 GLU n 1 29 ILE n 1 30 PHE n 1 31 LEU n 1 32 ARG n 1 33 GLU n 1 34 LEU n 1 35 ILE n 1 36 SER n 1 37 ASN n 1 38 ALA n 1 39 SER n 1 40 ASP n 1 41 ALA n 1 42 LEU n 1 43 ASP n 1 44 LYS n 1 45 ILE n 1 46 ARG n 1 47 TYR n 1 48 LYS n 1 49 SER n 1 50 LEU n 1 51 SER n 1 52 ASP n 1 53 PRO n 1 54 LYS n 1 55 GLN n 1 56 LEU n 1 57 GLU n 1 58 THR n 1 59 GLU n 1 60 PRO n 1 61 ASP n 1 62 LEU n 1 63 PHE n 1 64 ILE n 1 65 ARG n 1 66 ILE n 1 67 THR n 1 68 PRO n 1 69 LYS n 1 70 PRO n 1 71 GLU n 1 72 GLN n 1 73 LYS n 1 74 VAL n 1 75 LEU n 1 76 GLU n 1 77 ILE n 1 78 ARG n 1 79 ASP n 1 80 SER n 1 81 GLY n 1 82 ILE n 1 83 GLY n 1 84 MET n 1 85 THR n 1 86 LYS n 1 87 ALA n 1 88 GLU n 1 89 VAL n 1 90 ILE n 1 91 ASN n 1 92 ASN n 1 93 ILE n 1 94 GLY n 1 95 THR n 1 96 ILE n 1 97 ALA n 1 98 LYS n 1 99 SER n 1 100 GLY n 1 101 THR n 1 102 LYS n 1 103 ALA n 1 104 PHE n 1 105 MET n 1 106 GLU n 1 107 ALA n 1 108 LEU n 1 109 SER n 1 110 ALA n 1 111 GLY n 1 112 ALA n 1 113 ASP n 1 114 VAL n 1 115 SER n 1 116 MET n 1 117 ILE n 1 118 GLY n 1 119 GLN n 1 120 PHE n 1 121 GLY n 1 122 VAL n 1 123 GLY n 1 124 PHE n 1 125 TYR n 1 126 SER n 1 127 LEU n 1 128 PHE n 1 129 LEU n 1 130 VAL n 1 131 ALA n 1 132 ASP n 1 133 ARG n 1 134 VAL n 1 135 GLN n 1 136 MET n 1 137 ILE n 1 138 SER n 1 139 LYS n 1 140 SER n 1 141 ASN n 1 142 ASP n 1 143 ASP n 1 144 GLU n 1 145 GLN n 1 146 TYR n 1 147 ILE n 1 148 TRP n 1 149 GLU n 1 150 SER n 1 151 ASN n 1 152 ALA n 1 153 GLY n 1 154 GLY n 1 155 SER n 1 156 PHE n 1 157 THR n 1 158 VAL n 1 159 THR n 1 160 LEU n 1 161 ASP n 1 162 GLU n 1 163 VAL n 1 164 ASN n 1 165 GLU n 1 166 ARG n 1 167 ILE n 1 168 GLY n 1 169 ARG n 1 170 GLY n 1 171 THR n 1 172 ILE n 1 173 LEU n 1 174 ARG n 1 175 LEU n 1 176 PHE n 1 177 LEU n 1 178 LYS n 1 179 ASP n 1 180 ASP n 1 181 GLN n 1 182 LEU n 1 183 GLU n 1 184 TYR n 1 185 LEU n 1 186 GLU n 1 187 GLU n 1 188 LYS n 1 189 ARG n 1 190 ILE n 1 191 LYS n 1 192 GLU n 1 193 VAL n 1 194 ILE n 1 195 LYS n 1 196 ARG n 1 197 HIS n 1 198 SER n 1 199 GLU n 1 200 PHE n 1 201 VAL n 1 202 ALA n 1 203 TYR n 1 204 PRO n 1 205 ILE n 1 206 GLN n 1 207 LEU n 1 208 VAL n 1 209 VAL n 1 210 THR n 1 211 LYS n 1 212 GLU n 1 213 VAL n 1 214 GLU n 1 215 LYS n 1 216 GLU n 1 217 VAL n 1 218 PRO n 1 219 ILE n 1 220 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;BAKER'S YEAST ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SACCHAROMYCES CEREVISIAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GDM non-polymer . GELDANAMYCIN ? 'C29 H40 N2 O9' 560.636 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 MET 16 16 16 MET MET A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 MET 84 84 84 MET MET A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 PHE 124 124 124 PHE PHE A . n A 1 125 TYR 125 125 125 TYR TYR A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 MET 136 136 136 MET MET A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 GLU 144 144 144 GLU GLU A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ASP 180 180 180 ASP ASP A . n A 1 181 GLN 181 181 181 GLN GLN A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 TYR 184 184 184 TYR TYR A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 ARG 189 189 189 ARG ARG A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 ILE 194 194 194 ILE ILE A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 SER 198 198 198 SER SER A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 TYR 203 203 203 TYR TYR A . n A 1 204 PRO 204 204 204 PRO PRO A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 GLN 206 206 206 GLN GLN A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 THR 210 210 210 THR THR A . n A 1 211 LYS 211 211 211 LYS LYS A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 LYS 215 215 ? ? ? A . n A 1 216 GLU 216 216 ? ? ? A . n A 1 217 VAL 217 217 ? ? ? A . n A 1 218 PRO 218 218 ? ? ? A . n A 1 219 ILE 219 219 ? ? ? A . n A 1 220 PRO 220 220 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDM 1 1215 1215 GDM GDM A . C 3 GOL 1 1216 1216 GOL GOL A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . D 4 HOH 113 2113 2113 HOH HOH A . D 4 HOH 114 2114 2114 HOH HOH A . D 4 HOH 115 2115 2115 HOH HOH A . D 4 HOH 116 2116 2116 HOH HOH A . D 4 HOH 117 2117 2117 HOH HOH A . D 4 HOH 118 2118 2118 HOH HOH A . D 4 HOH 119 2119 2119 HOH HOH A . D 4 HOH 120 2120 2120 HOH HOH A . D 4 HOH 121 2121 2121 HOH HOH A . D 4 HOH 122 2122 2122 HOH HOH A . D 4 HOH 123 2123 2123 HOH HOH A . D 4 HOH 124 2124 2124 HOH HOH A . D 4 HOH 125 2125 2125 HOH HOH A . D 4 HOH 126 2126 2126 HOH HOH A . D 4 HOH 127 2127 2127 HOH HOH A . D 4 HOH 128 2128 2128 HOH HOH A . D 4 HOH 129 2129 2129 HOH HOH A . D 4 HOH 130 2130 2130 HOH HOH A . D 4 HOH 131 2131 2131 HOH HOH A . D 4 HOH 132 2132 2132 HOH HOH A . D 4 HOH 133 2133 2133 HOH HOH A . D 4 HOH 134 2134 2134 HOH HOH A . D 4 HOH 135 2135 2135 HOH HOH A . D 4 HOH 136 2136 2136 HOH HOH A . D 4 HOH 137 2137 2137 HOH HOH A . D 4 HOH 138 2138 2138 HOH HOH A . D 4 HOH 139 2139 2139 HOH HOH A . D 4 HOH 140 2140 2140 HOH HOH A . D 4 HOH 141 2141 2141 HOH HOH A . D 4 HOH 142 2142 2142 HOH HOH A . D 4 HOH 143 2143 2143 HOH HOH A . D 4 HOH 144 2144 2144 HOH HOH A . D 4 HOH 145 2145 2145 HOH HOH A . D 4 HOH 146 2146 2146 HOH HOH A . D 4 HOH 147 2147 2147 HOH HOH A . D 4 HOH 148 2148 2148 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 7 ? CD ? A GLU 7 CD 2 1 Y 1 A GLU 7 ? OE1 ? A GLU 7 OE1 3 1 Y 1 A GLU 7 ? OE2 ? A GLU 7 OE2 4 1 Y 1 A LYS 54 ? CD ? A LYS 54 CD 5 1 Y 1 A LYS 54 ? CE ? A LYS 54 CE 6 1 Y 1 A LYS 54 ? NZ ? A LYS 54 NZ 7 1 Y 1 A LYS 102 ? CE ? A LYS 102 CE 8 1 Y 1 A LYS 102 ? NZ ? A LYS 102 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 CrystalClear 'data reduction' . ? 2 CrystalClear 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 2YGF _cell.length_a 74.121 _cell.length_b 74.121 _cell.length_c 110.433 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YGF _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 # _exptl.entry_id 2YGF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_percent_sol 61 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 7' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU CCD' _diffrn_detector.pdbx_collection_date 2010-11-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YGF _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 74.12 _reflns.d_resolution_high 2.00 _reflns.number_obs 21531 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.30 _reflns.B_iso_Wilson_estimate 36.22 _reflns.pdbx_redundancy 43.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.73 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.80 _reflns_shell.pdbx_redundancy 28.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YGF _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 21456 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.872 _refine.ls_d_res_high 2.000 _refine.ls_percent_reflns_obs 99.89 _refine.ls_R_factor_obs 0.2164 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2139 _refine.ls_R_factor_R_free 0.2637 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1099 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -4.6713 _refine.aniso_B[2][2] -4.6713 _refine.aniso_B[3][3] 9.3426 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.353 _refine.solvent_model_param_bsol 43.882 _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.17 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'IN-HOUSE MODEL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.32 _refine.pdbx_overall_phase_error 24.46 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1685 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 148 _refine_hist.number_atoms_total 1879 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 25.872 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 1766 'X-RAY DIFFRACTION' ? f_angle_d 1.089 ? ? 2384 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.744 ? ? 671 'X-RAY DIFFRACTION' ? f_chiral_restr 0.068 ? ? 277 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 303 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.0000 2.0910 2474 0.2587 100.00 0.3063 . . 149 . . 'X-RAY DIFFRACTION' . 2.0910 2.2012 2489 0.2346 100.00 0.2800 . . 131 . . 'X-RAY DIFFRACTION' . 2.2012 2.3390 2487 0.2252 100.00 0.2709 . . 150 . . 'X-RAY DIFFRACTION' . 2.3390 2.5195 2502 0.2486 100.00 0.3206 . . 144 . . 'X-RAY DIFFRACTION' . 2.5195 2.7727 2514 0.2691 100.00 0.3622 . . 142 . . 'X-RAY DIFFRACTION' . 2.7727 3.1733 2560 0.2463 100.00 0.2742 . . 125 . . 'X-RAY DIFFRACTION' . 3.1733 3.9957 2583 0.2079 100.00 0.2604 . . 132 . . 'X-RAY DIFFRACTION' . 3.9957 25.8740 2748 0.1770 100.00 0.2135 . . 126 . . # _database_PDB_matrix.entry_id 2YGF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2YGF _struct.title 'L89V, L93I and V136M Mutant of N-Term HSP90 complexed with Geldanamycin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YGF _struct_keywords.pdbx_keywords CHAPERONE _struct_keywords.text CHAPERONE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HSP82_YEAST _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P02829 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YGF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02829 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 220 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 220 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YGF VAL A 89 ? UNP P02829 LEU 89 'engineered mutation' 89 1 1 2YGF ILE A 93 ? UNP P02829 LEU 93 'engineered mutation' 93 2 1 2YGF MET A 136 ? UNP P02829 VAL 136 'engineered mutation' 136 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 9 ? ASN A 21 ? GLN A 9 ASN A 21 1 ? 13 HELX_P HELX_P2 2 GLU A 28 ? SER A 49 ? GLU A 28 SER A 49 1 ? 22 HELX_P HELX_P3 3 LEU A 50 ? GLU A 59 ? LEU A 50 GLU A 59 5 ? 10 HELX_P HELX_P4 4 PRO A 70 ? GLN A 72 ? PRO A 70 GLN A 72 5 ? 3 HELX_P HELX_P5 5 THR A 85 ? ILE A 93 ? THR A 85 ILE A 93 1 ? 9 HELX_P HELX_P6 6 GLY A 100 ? ALA A 110 ? GLY A 100 ALA A 110 1 ? 11 HELX_P HELX_P7 7 ASP A 113 ? GLY A 121 ? ASP A 113 GLY A 121 5 ? 9 HELX_P HELX_P8 8 VAL A 122 ? LEU A 129 ? VAL A 122 LEU A 129 5 ? 8 HELX_P HELX_P9 9 GLN A 181 ? LEU A 185 ? GLN A 181 LEU A 185 5 ? 5 HELX_P HELX_P10 10 GLU A 186 ? SER A 198 ? GLU A 186 SER A 198 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AA 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 SER A 3 ? GLU A 7 ? SER A 3 GLU A 7 AA 2 SER A 155 ? LEU A 160 ? SER A 155 LEU A 160 AA 3 TYR A 146 ? SER A 150 ? TYR A 146 SER A 150 AA 4 ALA A 131 ? LYS A 139 ? ALA A 131 LYS A 139 AA 5 GLY A 170 ? LEU A 177 ? GLY A 170 LEU A 177 AA 6 VAL A 74 ? ASP A 79 ? VAL A 74 ASP A 79 AA 7 ILE A 64 ? LYS A 69 ? ILE A 64 LYS A 69 AA 8 ILE A 205 ? LEU A 207 ? ILE A 205 LEU A 207 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 6 ? N PHE A 6 O PHE A 156 ? O PHE A 156 AA 2 3 N THR A 159 ? N THR A 159 O ILE A 147 ? O ILE A 147 AA 3 4 N SER A 150 ? N SER A 150 O VAL A 134 ? O VAL A 134 AA 4 5 N LYS A 139 ? N LYS A 139 O GLY A 170 ? O GLY A 170 AA 5 6 N LEU A 175 ? N LEU A 175 O LEU A 75 ? O LEU A 75 AA 6 7 N ARG A 78 ? N ARG A 78 O ARG A 65 ? O ARG A 65 AA 7 8 N ILE A 66 ? N ILE A 66 O GLN A 206 ? O GLN A 206 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDM 1215 ? 23 'BINDING SITE FOR RESIDUE GDM A 1215' AC2 Software A GOL 1216 ? 6 'BINDING SITE FOR RESIDUE GOL A 1216' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ASN A 37 ? ASN A 37 . ? 1_555 ? 2 AC1 23 ALA A 38 ? ALA A 38 . ? 1_555 ? 3 AC1 23 ASP A 40 ? ASP A 40 . ? 1_555 ? 4 AC1 23 ALA A 41 ? ALA A 41 . ? 1_555 ? 5 AC1 23 LYS A 44 ? LYS A 44 . ? 1_555 ? 6 AC1 23 ASP A 79 ? ASP A 79 . ? 1_555 ? 7 AC1 23 ILE A 82 ? ILE A 82 . ? 1_555 ? 8 AC1 23 ASN A 92 ? ASN A 92 . ? 1_555 ? 9 AC1 23 LYS A 98 ? LYS A 98 . ? 1_555 ? 10 AC1 23 GLY A 121 ? GLY A 121 . ? 1_555 ? 11 AC1 23 VAL A 122 ? VAL A 122 . ? 1_555 ? 12 AC1 23 GLY A 123 ? GLY A 123 . ? 1_555 ? 13 AC1 23 PHE A 124 ? PHE A 124 . ? 1_555 ? 14 AC1 23 MET A 136 ? MET A 136 . ? 1_555 ? 15 AC1 23 THR A 171 ? THR A 171 . ? 1_555 ? 16 AC1 23 HOH D . ? HOH A 2032 . ? 1_555 ? 17 AC1 23 HOH D . ? HOH A 2033 . ? 1_555 ? 18 AC1 23 HOH D . ? HOH A 2035 . ? 1_555 ? 19 AC1 23 HOH D . ? HOH A 2072 . ? 1_555 ? 20 AC1 23 HOH D . ? HOH A 2087 . ? 1_555 ? 21 AC1 23 HOH D . ? HOH A 2100 . ? 1_555 ? 22 AC1 23 HOH D . ? HOH A 2146 . ? 1_555 ? 23 AC1 23 HOH D . ? HOH A 2147 . ? 1_555 ? 24 AC2 6 ARG A 65 ? ARG A 65 . ? 5_555 ? 25 AC2 6 LYS A 69 ? LYS A 69 . ? 1_555 ? 26 AC2 6 GLU A 71 ? GLU A 71 . ? 1_555 ? 27 AC2 6 THR A 210 ? THR A 210 . ? 1_555 ? 28 AC2 6 HOH D . ? HOH A 2062 . ? 1_555 ? 29 AC2 6 HOH D . ? HOH A 2148 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 71 ? ? HO2 A GOL 1216 ? ? 1.56 2 1 OE1 A GLU 28 ? ? HH22 A ARG 189 ? ? 1.57 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 HG A SER 99 ? A 1_555 HB3 A LYS 102 ? ? 5_655 1.15 2 1 HH11 A ARG 46 ? ? 1_555 HB2 A PHE 200 ? ? 8_554 1.32 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 21 ? ? -101.53 63.76 2 1 TYR A 24 ? ? -38.56 145.58 3 1 ASP A 52 ? ? -178.75 73.36 4 1 GLU A 59 ? ? -171.21 84.41 5 1 SER A 80 ? ? -104.99 42.71 6 1 SER A 99 ? A -55.79 96.74 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C14 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id GDM _pdbx_validate_chiral.auth_seq_id 1215 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 16.8384 _pdbx_refine_tls.origin_y -30.8533 _pdbx_refine_tls.origin_z 0.7498 _pdbx_refine_tls.T[1][1] 0.2213 _pdbx_refine_tls.T[2][2] 0.2291 _pdbx_refine_tls.T[3][3] 0.1833 _pdbx_refine_tls.T[1][2] 0.0111 _pdbx_refine_tls.T[1][3] 0.0238 _pdbx_refine_tls.T[2][3] -0.0099 _pdbx_refine_tls.L[1][1] 2.9391 _pdbx_refine_tls.L[2][2] 1.5112 _pdbx_refine_tls.L[3][3] 1.1578 _pdbx_refine_tls.L[1][2] -0.7369 _pdbx_refine_tls.L[1][3] -0.2482 _pdbx_refine_tls.L[2][3] 0.0174 _pdbx_refine_tls.S[1][1] -0.0905 _pdbx_refine_tls.S[1][2] -0.0147 _pdbx_refine_tls.S[1][3] -0.0873 _pdbx_refine_tls.S[2][1] 0.0945 _pdbx_refine_tls.S[2][2] 0.0287 _pdbx_refine_tls.S[2][3] 0.0125 _pdbx_refine_tls.S[3][1] -0.0621 _pdbx_refine_tls.S[3][2] 0.0117 _pdbx_refine_tls.S[3][3] 0.0548 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details 'CHAIN A' # _pdbx_entry_details.entry_id 2YGF _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, LEU 89 TO VAL ENGINEERED RESIDUE IN CHAIN A, LEU 93 TO ILE ENGINEERED RESIDUE IN CHAIN A, VAL 136 TO MET ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;GELDANAMYCIN (GDM) IS AN INHIBITOR OF HSP90 ORIGINALLY ISOLATED FROM STREPTOMYCES HYGROSCOPICUS (TAXID: 1912). ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LYS 215 ? A LYS 215 3 1 Y 1 A GLU 216 ? A GLU 216 4 1 Y 1 A VAL 217 ? A VAL 217 5 1 Y 1 A PRO 218 ? A PRO 218 6 1 Y 1 A ILE 219 ? A ILE 219 7 1 Y 1 A PRO 220 ? A PRO 220 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GDM O1 O N N 74 GDM O2 O N N 75 GDM O3 O N N 76 GDM O4 O N N 77 GDM O5 O N N 78 GDM O6 O N N 79 GDM O7 O N N 80 GDM O8 O N N 81 GDM O9 O N N 82 GDM N1 N N N 83 GDM N2 N N N 84 GDM C1 C N N 85 GDM C2 C N N 86 GDM C3 C N N 87 GDM C4 C N N 88 GDM C5 C N N 89 GDM C6 C N S 90 GDM C7 C N S 91 GDM C8 C N N 92 GDM C9 C N N 93 GDM C10 C N S 94 GDM C11 C N R 95 GDM C12 C N S 96 GDM C13 C N N 97 GDM C14 C N R 98 GDM C15 C N N 99 GDM C16 C N N 100 GDM C17 C N N 101 GDM C18 C N N 102 GDM C19 C N N 103 GDM C20 C N N 104 GDM C21 C N N 105 GDM C22 C N N 106 GDM C23 C N N 107 GDM C24 C N N 108 GDM C25 C N N 109 GDM C26 C N N 110 GDM C27 C N N 111 GDM C28 C N N 112 GDM C29 C N N 113 GDM HO5 H N N 114 GDM HN1 H N N 115 GDM HN21 H N N 116 GDM HN22 H N N 117 GDM H3 H N N 118 GDM H4 H N N 119 GDM H5 H N N 120 GDM H6 H N N 121 GDM H7 H N N 122 GDM H9 H N N 123 GDM H10 H N N 124 GDM H11 H N N 125 GDM H12 H N N 126 GDM H131 H N N 127 GDM H132 H N N 128 GDM H14 H N N 129 GDM H151 H N N 130 GDM H152 H N N 131 GDM H19 H N N 132 GDM H221 H N N 133 GDM H222 H N N 134 GDM H223 H N N 135 GDM H231 H N N 136 GDM H232 H N N 137 GDM H233 H N N 138 GDM H251 H N N 139 GDM H252 H N N 140 GDM H253 H N N 141 GDM H261 H N N 142 GDM H262 H N N 143 GDM H263 H N N 144 GDM H271 H N N 145 GDM H272 H N N 146 GDM H273 H N N 147 GDM H281 H N N 148 GDM H282 H N N 149 GDM H283 H N N 150 GDM H291 H N N 151 GDM H292 H N N 152 GDM H293 H N N 153 GLN N N N N 154 GLN CA C N S 155 GLN C C N N 156 GLN O O N N 157 GLN CB C N N 158 GLN CG C N N 159 GLN CD C N N 160 GLN OE1 O N N 161 GLN NE2 N N N 162 GLN OXT O N N 163 GLN H H N N 164 GLN H2 H N N 165 GLN HA H N N 166 GLN HB2 H N N 167 GLN HB3 H N N 168 GLN HG2 H N N 169 GLN HG3 H N N 170 GLN HE21 H N N 171 GLN HE22 H N N 172 GLN HXT H N N 173 GLU N N N N 174 GLU CA C N S 175 GLU C C N N 176 GLU O O N N 177 GLU CB C N N 178 GLU CG C N N 179 GLU CD C N N 180 GLU OE1 O N N 181 GLU OE2 O N N 182 GLU OXT O N N 183 GLU H H N N 184 GLU H2 H N N 185 GLU HA H N N 186 GLU HB2 H N N 187 GLU HB3 H N N 188 GLU HG2 H N N 189 GLU HG3 H N N 190 GLU HE2 H N N 191 GLU HXT H N N 192 GLY N N N N 193 GLY CA C N N 194 GLY C C N N 195 GLY O O N N 196 GLY OXT O N N 197 GLY H H N N 198 GLY H2 H N N 199 GLY HA2 H N N 200 GLY HA3 H N N 201 GLY HXT H N N 202 GOL C1 C N N 203 GOL O1 O N N 204 GOL C2 C N N 205 GOL O2 O N N 206 GOL C3 C N N 207 GOL O3 O N N 208 GOL H11 H N N 209 GOL H12 H N N 210 GOL HO1 H N N 211 GOL H2 H N N 212 GOL HO2 H N N 213 GOL H31 H N N 214 GOL H32 H N N 215 GOL HO3 H N N 216 HIS N N N N 217 HIS CA C N S 218 HIS C C N N 219 HIS O O N N 220 HIS CB C N N 221 HIS CG C Y N 222 HIS ND1 N Y N 223 HIS CD2 C Y N 224 HIS CE1 C Y N 225 HIS NE2 N Y N 226 HIS OXT O N N 227 HIS H H N N 228 HIS H2 H N N 229 HIS HA H N N 230 HIS HB2 H N N 231 HIS HB3 H N N 232 HIS HD1 H N N 233 HIS HD2 H N N 234 HIS HE1 H N N 235 HIS HE2 H N N 236 HIS HXT H N N 237 HOH O O N N 238 HOH H1 H N N 239 HOH H2 H N N 240 ILE N N N N 241 ILE CA C N S 242 ILE C C N N 243 ILE O O N N 244 ILE CB C N S 245 ILE CG1 C N N 246 ILE CG2 C N N 247 ILE CD1 C N N 248 ILE OXT O N N 249 ILE H H N N 250 ILE H2 H N N 251 ILE HA H N N 252 ILE HB H N N 253 ILE HG12 H N N 254 ILE HG13 H N N 255 ILE HG21 H N N 256 ILE HG22 H N N 257 ILE HG23 H N N 258 ILE HD11 H N N 259 ILE HD12 H N N 260 ILE HD13 H N N 261 ILE HXT H N N 262 LEU N N N N 263 LEU CA C N S 264 LEU C C N N 265 LEU O O N N 266 LEU CB C N N 267 LEU CG C N N 268 LEU CD1 C N N 269 LEU CD2 C N N 270 LEU OXT O N N 271 LEU H H N N 272 LEU H2 H N N 273 LEU HA H N N 274 LEU HB2 H N N 275 LEU HB3 H N N 276 LEU HG H N N 277 LEU HD11 H N N 278 LEU HD12 H N N 279 LEU HD13 H N N 280 LEU HD21 H N N 281 LEU HD22 H N N 282 LEU HD23 H N N 283 LEU HXT H N N 284 LYS N N N N 285 LYS CA C N S 286 LYS C C N N 287 LYS O O N N 288 LYS CB C N N 289 LYS CG C N N 290 LYS CD C N N 291 LYS CE C N N 292 LYS NZ N N N 293 LYS OXT O N N 294 LYS H H N N 295 LYS H2 H N N 296 LYS HA H N N 297 LYS HB2 H N N 298 LYS HB3 H N N 299 LYS HG2 H N N 300 LYS HG3 H N N 301 LYS HD2 H N N 302 LYS HD3 H N N 303 LYS HE2 H N N 304 LYS HE3 H N N 305 LYS HZ1 H N N 306 LYS HZ2 H N N 307 LYS HZ3 H N N 308 LYS HXT H N N 309 MET N N N N 310 MET CA C N S 311 MET C C N N 312 MET O O N N 313 MET CB C N N 314 MET CG C N N 315 MET SD S N N 316 MET CE C N N 317 MET OXT O N N 318 MET H H N N 319 MET H2 H N N 320 MET HA H N N 321 MET HB2 H N N 322 MET HB3 H N N 323 MET HG2 H N N 324 MET HG3 H N N 325 MET HE1 H N N 326 MET HE2 H N N 327 MET HE3 H N N 328 MET HXT H N N 329 PHE N N N N 330 PHE CA C N S 331 PHE C C N N 332 PHE O O N N 333 PHE CB C N N 334 PHE CG C Y N 335 PHE CD1 C Y N 336 PHE CD2 C Y N 337 PHE CE1 C Y N 338 PHE CE2 C Y N 339 PHE CZ C Y N 340 PHE OXT O N N 341 PHE H H N N 342 PHE H2 H N N 343 PHE HA H N N 344 PHE HB2 H N N 345 PHE HB3 H N N 346 PHE HD1 H N N 347 PHE HD2 H N N 348 PHE HE1 H N N 349 PHE HE2 H N N 350 PHE HZ H N N 351 PHE HXT H N N 352 PRO N N N N 353 PRO CA C N S 354 PRO C C N N 355 PRO O O N N 356 PRO CB C N N 357 PRO CG C N N 358 PRO CD C N N 359 PRO OXT O N N 360 PRO H H N N 361 PRO HA H N N 362 PRO HB2 H N N 363 PRO HB3 H N N 364 PRO HG2 H N N 365 PRO HG3 H N N 366 PRO HD2 H N N 367 PRO HD3 H N N 368 PRO HXT H N N 369 SER N N N N 370 SER CA C N S 371 SER C C N N 372 SER O O N N 373 SER CB C N N 374 SER OG O N N 375 SER OXT O N N 376 SER H H N N 377 SER H2 H N N 378 SER HA H N N 379 SER HB2 H N N 380 SER HB3 H N N 381 SER HG H N N 382 SER HXT H N N 383 THR N N N N 384 THR CA C N S 385 THR C C N N 386 THR O O N N 387 THR CB C N R 388 THR OG1 O N N 389 THR CG2 C N N 390 THR OXT O N N 391 THR H H N N 392 THR H2 H N N 393 THR HA H N N 394 THR HB H N N 395 THR HG1 H N N 396 THR HG21 H N N 397 THR HG22 H N N 398 THR HG23 H N N 399 THR HXT H N N 400 TRP N N N N 401 TRP CA C N S 402 TRP C C N N 403 TRP O O N N 404 TRP CB C N N 405 TRP CG C Y N 406 TRP CD1 C Y N 407 TRP CD2 C Y N 408 TRP NE1 N Y N 409 TRP CE2 C Y N 410 TRP CE3 C Y N 411 TRP CZ2 C Y N 412 TRP CZ3 C Y N 413 TRP CH2 C Y N 414 TRP OXT O N N 415 TRP H H N N 416 TRP H2 H N N 417 TRP HA H N N 418 TRP HB2 H N N 419 TRP HB3 H N N 420 TRP HD1 H N N 421 TRP HE1 H N N 422 TRP HE3 H N N 423 TRP HZ2 H N N 424 TRP HZ3 H N N 425 TRP HH2 H N N 426 TRP HXT H N N 427 TYR N N N N 428 TYR CA C N S 429 TYR C C N N 430 TYR O O N N 431 TYR CB C N N 432 TYR CG C Y N 433 TYR CD1 C Y N 434 TYR CD2 C Y N 435 TYR CE1 C Y N 436 TYR CE2 C Y N 437 TYR CZ C Y N 438 TYR OH O N N 439 TYR OXT O N N 440 TYR H H N N 441 TYR H2 H N N 442 TYR HA H N N 443 TYR HB2 H N N 444 TYR HB3 H N N 445 TYR HD1 H N N 446 TYR HD2 H N N 447 TYR HE1 H N N 448 TYR HE2 H N N 449 TYR HH H N N 450 TYR HXT H N N 451 VAL N N N N 452 VAL CA C N S 453 VAL C C N N 454 VAL O O N N 455 VAL CB C N N 456 VAL CG1 C N N 457 VAL CG2 C N N 458 VAL OXT O N N 459 VAL H H N N 460 VAL H2 H N N 461 VAL HA H N N 462 VAL HB H N N 463 VAL HG11 H N N 464 VAL HG12 H N N 465 VAL HG13 H N N 466 VAL HG21 H N N 467 VAL HG22 H N N 468 VAL HG23 H N N 469 VAL HXT H N N 470 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GDM O1 C1 doub N N 70 GDM O2 C6 sing N N 71 GDM O2 C23 sing N N 72 GDM O3 C7 sing N N 73 GDM O3 C24 sing N N 74 GDM O4 C24 doub N N 75 GDM O5 C11 sing N N 76 GDM O5 HO5 sing N N 77 GDM O6 C12 sing N N 78 GDM O6 C27 sing N N 79 GDM O7 C17 sing N N 80 GDM O7 C29 sing N N 81 GDM O8 C18 doub N N 82 GDM O9 C21 doub N N 83 GDM N1 C1 sing N N 84 GDM N1 C20 sing N N 85 GDM N1 HN1 sing N N 86 GDM N2 C24 sing N N 87 GDM N2 HN21 sing N N 88 GDM N2 HN22 sing N N 89 GDM C1 C2 sing N N 90 GDM C2 C3 doub N E 91 GDM C2 C22 sing N N 92 GDM C3 C4 sing N N 93 GDM C3 H3 sing N N 94 GDM C4 C5 doub N Z 95 GDM C4 H4 sing N N 96 GDM C5 C6 sing N N 97 GDM C5 H5 sing N N 98 GDM C6 C7 sing N N 99 GDM C6 H6 sing N N 100 GDM C7 C8 sing N N 101 GDM C7 H7 sing N N 102 GDM C8 C9 doub N E 103 GDM C8 C25 sing N N 104 GDM C9 C10 sing N N 105 GDM C9 H9 sing N N 106 GDM C10 C11 sing N N 107 GDM C10 C26 sing N N 108 GDM C10 H10 sing N N 109 GDM C11 C12 sing N N 110 GDM C11 H11 sing N N 111 GDM C12 C13 sing N N 112 GDM C12 H12 sing N N 113 GDM C13 C14 sing N N 114 GDM C13 H131 sing N N 115 GDM C13 H132 sing N N 116 GDM C14 C15 sing N N 117 GDM C14 C28 sing N N 118 GDM C14 H14 sing N N 119 GDM C15 C16 sing N N 120 GDM C15 H151 sing N N 121 GDM C15 H152 sing N N 122 GDM C16 C17 doub N N 123 GDM C16 C21 sing N N 124 GDM C17 C18 sing N N 125 GDM C18 C19 sing N N 126 GDM C19 C20 doub N N 127 GDM C19 H19 sing N N 128 GDM C20 C21 sing N N 129 GDM C22 H221 sing N N 130 GDM C22 H222 sing N N 131 GDM C22 H223 sing N N 132 GDM C23 H231 sing N N 133 GDM C23 H232 sing N N 134 GDM C23 H233 sing N N 135 GDM C25 H251 sing N N 136 GDM C25 H252 sing N N 137 GDM C25 H253 sing N N 138 GDM C26 H261 sing N N 139 GDM C26 H262 sing N N 140 GDM C26 H263 sing N N 141 GDM C27 H271 sing N N 142 GDM C27 H272 sing N N 143 GDM C27 H273 sing N N 144 GDM C28 H281 sing N N 145 GDM C28 H282 sing N N 146 GDM C28 H283 sing N N 147 GDM C29 H291 sing N N 148 GDM C29 H292 sing N N 149 GDM C29 H293 sing N N 150 GLN N CA sing N N 151 GLN N H sing N N 152 GLN N H2 sing N N 153 GLN CA C sing N N 154 GLN CA CB sing N N 155 GLN CA HA sing N N 156 GLN C O doub N N 157 GLN C OXT sing N N 158 GLN CB CG sing N N 159 GLN CB HB2 sing N N 160 GLN CB HB3 sing N N 161 GLN CG CD sing N N 162 GLN CG HG2 sing N N 163 GLN CG HG3 sing N N 164 GLN CD OE1 doub N N 165 GLN CD NE2 sing N N 166 GLN NE2 HE21 sing N N 167 GLN NE2 HE22 sing N N 168 GLN OXT HXT sing N N 169 GLU N CA sing N N 170 GLU N H sing N N 171 GLU N H2 sing N N 172 GLU CA C sing N N 173 GLU CA CB sing N N 174 GLU CA HA sing N N 175 GLU C O doub N N 176 GLU C OXT sing N N 177 GLU CB CG sing N N 178 GLU CB HB2 sing N N 179 GLU CB HB3 sing N N 180 GLU CG CD sing N N 181 GLU CG HG2 sing N N 182 GLU CG HG3 sing N N 183 GLU CD OE1 doub N N 184 GLU CD OE2 sing N N 185 GLU OE2 HE2 sing N N 186 GLU OXT HXT sing N N 187 GLY N CA sing N N 188 GLY N H sing N N 189 GLY N H2 sing N N 190 GLY CA C sing N N 191 GLY CA HA2 sing N N 192 GLY CA HA3 sing N N 193 GLY C O doub N N 194 GLY C OXT sing N N 195 GLY OXT HXT sing N N 196 GOL C1 O1 sing N N 197 GOL C1 C2 sing N N 198 GOL C1 H11 sing N N 199 GOL C1 H12 sing N N 200 GOL O1 HO1 sing N N 201 GOL C2 O2 sing N N 202 GOL C2 C3 sing N N 203 GOL C2 H2 sing N N 204 GOL O2 HO2 sing N N 205 GOL C3 O3 sing N N 206 GOL C3 H31 sing N N 207 GOL C3 H32 sing N N 208 GOL O3 HO3 sing N N 209 HIS N CA sing N N 210 HIS N H sing N N 211 HIS N H2 sing N N 212 HIS CA C sing N N 213 HIS CA CB sing N N 214 HIS CA HA sing N N 215 HIS C O doub N N 216 HIS C OXT sing N N 217 HIS CB CG sing N N 218 HIS CB HB2 sing N N 219 HIS CB HB3 sing N N 220 HIS CG ND1 sing Y N 221 HIS CG CD2 doub Y N 222 HIS ND1 CE1 doub Y N 223 HIS ND1 HD1 sing N N 224 HIS CD2 NE2 sing Y N 225 HIS CD2 HD2 sing N N 226 HIS CE1 NE2 sing Y N 227 HIS CE1 HE1 sing N N 228 HIS NE2 HE2 sing N N 229 HIS OXT HXT sing N N 230 HOH O H1 sing N N 231 HOH O H2 sing N N 232 ILE N CA sing N N 233 ILE N H sing N N 234 ILE N H2 sing N N 235 ILE CA C sing N N 236 ILE CA CB sing N N 237 ILE CA HA sing N N 238 ILE C O doub N N 239 ILE C OXT sing N N 240 ILE CB CG1 sing N N 241 ILE CB CG2 sing N N 242 ILE CB HB sing N N 243 ILE CG1 CD1 sing N N 244 ILE CG1 HG12 sing N N 245 ILE CG1 HG13 sing N N 246 ILE CG2 HG21 sing N N 247 ILE CG2 HG22 sing N N 248 ILE CG2 HG23 sing N N 249 ILE CD1 HD11 sing N N 250 ILE CD1 HD12 sing N N 251 ILE CD1 HD13 sing N N 252 ILE OXT HXT sing N N 253 LEU N CA sing N N 254 LEU N H sing N N 255 LEU N H2 sing N N 256 LEU CA C sing N N 257 LEU CA CB sing N N 258 LEU CA HA sing N N 259 LEU C O doub N N 260 LEU C OXT sing N N 261 LEU CB CG sing N N 262 LEU CB HB2 sing N N 263 LEU CB HB3 sing N N 264 LEU CG CD1 sing N N 265 LEU CG CD2 sing N N 266 LEU CG HG sing N N 267 LEU CD1 HD11 sing N N 268 LEU CD1 HD12 sing N N 269 LEU CD1 HD13 sing N N 270 LEU CD2 HD21 sing N N 271 LEU CD2 HD22 sing N N 272 LEU CD2 HD23 sing N N 273 LEU OXT HXT sing N N 274 LYS N CA sing N N 275 LYS N H sing N N 276 LYS N H2 sing N N 277 LYS CA C sing N N 278 LYS CA CB sing N N 279 LYS CA HA sing N N 280 LYS C O doub N N 281 LYS C OXT sing N N 282 LYS CB CG sing N N 283 LYS CB HB2 sing N N 284 LYS CB HB3 sing N N 285 LYS CG CD sing N N 286 LYS CG HG2 sing N N 287 LYS CG HG3 sing N N 288 LYS CD CE sing N N 289 LYS CD HD2 sing N N 290 LYS CD HD3 sing N N 291 LYS CE NZ sing N N 292 LYS CE HE2 sing N N 293 LYS CE HE3 sing N N 294 LYS NZ HZ1 sing N N 295 LYS NZ HZ2 sing N N 296 LYS NZ HZ3 sing N N 297 LYS OXT HXT sing N N 298 MET N CA sing N N 299 MET N H sing N N 300 MET N H2 sing N N 301 MET CA C sing N N 302 MET CA CB sing N N 303 MET CA HA sing N N 304 MET C O doub N N 305 MET C OXT sing N N 306 MET CB CG sing N N 307 MET CB HB2 sing N N 308 MET CB HB3 sing N N 309 MET CG SD sing N N 310 MET CG HG2 sing N N 311 MET CG HG3 sing N N 312 MET SD CE sing N N 313 MET CE HE1 sing N N 314 MET CE HE2 sing N N 315 MET CE HE3 sing N N 316 MET OXT HXT sing N N 317 PHE N CA sing N N 318 PHE N H sing N N 319 PHE N H2 sing N N 320 PHE CA C sing N N 321 PHE CA CB sing N N 322 PHE CA HA sing N N 323 PHE C O doub N N 324 PHE C OXT sing N N 325 PHE CB CG sing N N 326 PHE CB HB2 sing N N 327 PHE CB HB3 sing N N 328 PHE CG CD1 doub Y N 329 PHE CG CD2 sing Y N 330 PHE CD1 CE1 sing Y N 331 PHE CD1 HD1 sing N N 332 PHE CD2 CE2 doub Y N 333 PHE CD2 HD2 sing N N 334 PHE CE1 CZ doub Y N 335 PHE CE1 HE1 sing N N 336 PHE CE2 CZ sing Y N 337 PHE CE2 HE2 sing N N 338 PHE CZ HZ sing N N 339 PHE OXT HXT sing N N 340 PRO N CA sing N N 341 PRO N CD sing N N 342 PRO N H sing N N 343 PRO CA C sing N N 344 PRO CA CB sing N N 345 PRO CA HA sing N N 346 PRO C O doub N N 347 PRO C OXT sing N N 348 PRO CB CG sing N N 349 PRO CB HB2 sing N N 350 PRO CB HB3 sing N N 351 PRO CG CD sing N N 352 PRO CG HG2 sing N N 353 PRO CG HG3 sing N N 354 PRO CD HD2 sing N N 355 PRO CD HD3 sing N N 356 PRO OXT HXT sing N N 357 SER N CA sing N N 358 SER N H sing N N 359 SER N H2 sing N N 360 SER CA C sing N N 361 SER CA CB sing N N 362 SER CA HA sing N N 363 SER C O doub N N 364 SER C OXT sing N N 365 SER CB OG sing N N 366 SER CB HB2 sing N N 367 SER CB HB3 sing N N 368 SER OG HG sing N N 369 SER OXT HXT sing N N 370 THR N CA sing N N 371 THR N H sing N N 372 THR N H2 sing N N 373 THR CA C sing N N 374 THR CA CB sing N N 375 THR CA HA sing N N 376 THR C O doub N N 377 THR C OXT sing N N 378 THR CB OG1 sing N N 379 THR CB CG2 sing N N 380 THR CB HB sing N N 381 THR OG1 HG1 sing N N 382 THR CG2 HG21 sing N N 383 THR CG2 HG22 sing N N 384 THR CG2 HG23 sing N N 385 THR OXT HXT sing N N 386 TRP N CA sing N N 387 TRP N H sing N N 388 TRP N H2 sing N N 389 TRP CA C sing N N 390 TRP CA CB sing N N 391 TRP CA HA sing N N 392 TRP C O doub N N 393 TRP C OXT sing N N 394 TRP CB CG sing N N 395 TRP CB HB2 sing N N 396 TRP CB HB3 sing N N 397 TRP CG CD1 doub Y N 398 TRP CG CD2 sing Y N 399 TRP CD1 NE1 sing Y N 400 TRP CD1 HD1 sing N N 401 TRP CD2 CE2 doub Y N 402 TRP CD2 CE3 sing Y N 403 TRP NE1 CE2 sing Y N 404 TRP NE1 HE1 sing N N 405 TRP CE2 CZ2 sing Y N 406 TRP CE3 CZ3 doub Y N 407 TRP CE3 HE3 sing N N 408 TRP CZ2 CH2 doub Y N 409 TRP CZ2 HZ2 sing N N 410 TRP CZ3 CH2 sing Y N 411 TRP CZ3 HZ3 sing N N 412 TRP CH2 HH2 sing N N 413 TRP OXT HXT sing N N 414 TYR N CA sing N N 415 TYR N H sing N N 416 TYR N H2 sing N N 417 TYR CA C sing N N 418 TYR CA CB sing N N 419 TYR CA HA sing N N 420 TYR C O doub N N 421 TYR C OXT sing N N 422 TYR CB CG sing N N 423 TYR CB HB2 sing N N 424 TYR CB HB3 sing N N 425 TYR CG CD1 doub Y N 426 TYR CG CD2 sing Y N 427 TYR CD1 CE1 sing Y N 428 TYR CD1 HD1 sing N N 429 TYR CD2 CE2 doub Y N 430 TYR CD2 HD2 sing N N 431 TYR CE1 CZ doub Y N 432 TYR CE1 HE1 sing N N 433 TYR CE2 CZ sing Y N 434 TYR CE2 HE2 sing N N 435 TYR CZ OH sing N N 436 TYR OH HH sing N N 437 TYR OXT HXT sing N N 438 VAL N CA sing N N 439 VAL N H sing N N 440 VAL N H2 sing N N 441 VAL CA C sing N N 442 VAL CA CB sing N N 443 VAL CA HA sing N N 444 VAL C O doub N N 445 VAL C OXT sing N N 446 VAL CB CG1 sing N N 447 VAL CB CG2 sing N N 448 VAL CB HB sing N N 449 VAL CG1 HG11 sing N N 450 VAL CG1 HG12 sing N N 451 VAL CG1 HG13 sing N N 452 VAL CG2 HG21 sing N N 453 VAL CG2 HG22 sing N N 454 VAL CG2 HG23 sing N N 455 VAL OXT HXT sing N N 456 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'IN-HOUSE MODEL' # _atom_sites.entry_id 2YGF _atom_sites.fract_transf_matrix[1][1] 0.013491 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013491 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009055 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_