data_2YGN # _entry.id 2YGN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YGN pdb_00002ygn 10.2210/pdb2ygn/pdb PDBE EBI-48066 ? ? WWPDB D_1290048066 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2YGQ unspecified ;WIF DOMAIN-EPIDERMAL GROWTH FACTOR (EGF)-LIKE DOMAINS 1-3 OF HUMAN WNT INHIBITORY FACTOR 1 IN COMPLEX WITH 1,2-DIPALMITOYLPHOSPHATIDYLCHOLINE ; PDB 2YGO unspecified 'WIF DOMAIN-EGF-LIKE DOMAIN 1 OF HUMAN WNT INHIBITORY FACTOR 1 IN COMPLEX WITH 1,2- DIPALMITOYLPHOSPHATIDYLCHOLINE' PDB 2YGP unspecified 'WIF DOMAIN-EGF-LIKE DOMAIN 1 MET77TRP OF HUMAN WNT INHIBITORY FACTOR 1 IN COMPLEX WITH 1,2- DIPALMITOYLPHOSPHATIDYLCHOLINE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YGN _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-04-19 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Malinauskas, T.' 1 'Aricescu, A.R.' 2 'Lu, W.' 3 'Siebold, C.' 4 'Jones, E.Y.' 5 # _citation.id primary _citation.title 'Modular Mechanism of Wnt Signaling Inhibition by Wnt Inhibitory Factor 1' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 18 _citation.page_first 886 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21743455 _citation.pdbx_database_id_DOI 10.1038/NSMB.2081 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Malinauskas, T.' 1 ? primary 'Aricescu, A.R.' 2 ? primary 'Lu, W.' 3 ? primary 'Siebold, C.' 4 ? primary 'Jones, E.Y.' 5 ? # _cell.entry_id 2YGN _cell.length_a 49.912 _cell.length_b 134.138 _cell.length_c 60.378 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YGN _symmetry.space_group_name_H-M 'C 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'WNT INHIBITORY FACTOR 1' 17609.219 1 ? ? 'WIF DOMAIN, RESIDUES 35-178' ? 2 non-polymer syn 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE 734.039 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 5 water nat water 18.015 83 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name WIF-1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;ETGSLYLWIDAHQARVLIGFEEDILIVSEG(MLY)MAPFTHDFR(MLY)AQQRMPAIPVNIHSMNFTWQAAGQAEYFYEF LSLRSLD(MLY)GIMADPTVNVPLLGTVPH(MLY)ASVVQVGFPCLG(MLY)QDGVAAFEVDVIVMNSEGNTIL(MLY)T PQNAIFFKTCQGTKHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;ETGSLYLWIDAHQARVLIGFEEDILIVSEGKMAPFTHDFRKAQQRMPAIPVNIHSMNFTWQAAGQAEYFYEFLSLRSLDK GIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNTILKTPQNAIFFKTCQGTKHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 THR n 1 3 GLY n 1 4 SER n 1 5 LEU n 1 6 TYR n 1 7 LEU n 1 8 TRP n 1 9 ILE n 1 10 ASP n 1 11 ALA n 1 12 HIS n 1 13 GLN n 1 14 ALA n 1 15 ARG n 1 16 VAL n 1 17 LEU n 1 18 ILE n 1 19 GLY n 1 20 PHE n 1 21 GLU n 1 22 GLU n 1 23 ASP n 1 24 ILE n 1 25 LEU n 1 26 ILE n 1 27 VAL n 1 28 SER n 1 29 GLU n 1 30 GLY n 1 31 MLY n 1 32 MET n 1 33 ALA n 1 34 PRO n 1 35 PHE n 1 36 THR n 1 37 HIS n 1 38 ASP n 1 39 PHE n 1 40 ARG n 1 41 MLY n 1 42 ALA n 1 43 GLN n 1 44 GLN n 1 45 ARG n 1 46 MET n 1 47 PRO n 1 48 ALA n 1 49 ILE n 1 50 PRO n 1 51 VAL n 1 52 ASN n 1 53 ILE n 1 54 HIS n 1 55 SER n 1 56 MET n 1 57 ASN n 1 58 PHE n 1 59 THR n 1 60 TRP n 1 61 GLN n 1 62 ALA n 1 63 ALA n 1 64 GLY n 1 65 GLN n 1 66 ALA n 1 67 GLU n 1 68 TYR n 1 69 PHE n 1 70 TYR n 1 71 GLU n 1 72 PHE n 1 73 LEU n 1 74 SER n 1 75 LEU n 1 76 ARG n 1 77 SER n 1 78 LEU n 1 79 ASP n 1 80 MLY n 1 81 GLY n 1 82 ILE n 1 83 MET n 1 84 ALA n 1 85 ASP n 1 86 PRO n 1 87 THR n 1 88 VAL n 1 89 ASN n 1 90 VAL n 1 91 PRO n 1 92 LEU n 1 93 LEU n 1 94 GLY n 1 95 THR n 1 96 VAL n 1 97 PRO n 1 98 HIS n 1 99 MLY n 1 100 ALA n 1 101 SER n 1 102 VAL n 1 103 VAL n 1 104 GLN n 1 105 VAL n 1 106 GLY n 1 107 PHE n 1 108 PRO n 1 109 CYS n 1 110 LEU n 1 111 GLY n 1 112 MLY n 1 113 GLN n 1 114 ASP n 1 115 GLY n 1 116 VAL n 1 117 ALA n 1 118 ALA n 1 119 PHE n 1 120 GLU n 1 121 VAL n 1 122 ASP n 1 123 VAL n 1 124 ILE n 1 125 VAL n 1 126 MET n 1 127 ASN n 1 128 SER n 1 129 GLU n 1 130 GLY n 1 131 ASN n 1 132 THR n 1 133 ILE n 1 134 LEU n 1 135 MLY n 1 136 THR n 1 137 PRO n 1 138 GLN n 1 139 ASN n 1 140 ALA n 1 141 ILE n 1 142 PHE n 1 143 PHE n 1 144 LYS n 1 145 THR n 1 146 CYS n 1 147 GLN n 1 148 GLY n 1 149 THR n 1 150 LYS n 1 151 HIS n 1 152 HIS n 1 153 HIS n 1 154 HIS n 1 155 HIS n 1 156 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name HUMAN _entity_src_gen.pdbx_host_org_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'N-ACETYLGLUCOSAMINYLTRANSFERASE I-NEGATIVE HEK 293S GNTI(-)CELLS' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PHLSEC _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code WIF1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9Y5W5 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YGN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 147 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9Y5W5 _struct_ref_seq.db_align_beg 35 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 178 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 35 _struct_ref_seq.pdbx_auth_seq_align_end 178 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YGN GLU A 1 ? UNP Q9Y5W5 ? ? 'expression tag' 32 1 1 2YGN THR A 2 ? UNP Q9Y5W5 ? ? 'expression tag' 33 2 1 2YGN GLY A 3 ? UNP Q9Y5W5 ? ? 'expression tag' 34 3 1 2YGN MLY A 135 ? UNP Q9Y5W5 GLN 166 variant 166 4 1 2YGN GLY A 148 ? UNP Q9Y5W5 ? ? 'expression tag' 179 5 1 2YGN THR A 149 ? UNP Q9Y5W5 ? ? 'expression tag' 180 6 1 2YGN LYS A 150 ? UNP Q9Y5W5 ? ? 'expression tag' 181 7 1 2YGN HIS A 151 ? UNP Q9Y5W5 ? ? 'expression tag' 182 8 1 2YGN HIS A 152 ? UNP Q9Y5W5 ? ? 'expression tag' 183 9 1 2YGN HIS A 153 ? UNP Q9Y5W5 ? ? 'expression tag' 184 10 1 2YGN HIS A 154 ? UNP Q9Y5W5 ? ? 'expression tag' 185 11 1 2YGN HIS A 155 ? UNP Q9Y5W5 ? ? 'expression tag' 186 12 1 2YGN HIS A 156 ? UNP Q9Y5W5 ? ? 'expression tag' 187 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PCF non-polymer . 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE ? 'C40 H80 N O8 P' 734.039 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YGN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_percent_sol 57 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PEG 8000 30 % W/V, 200 MM SODIUM ACETATE, 100 MM SODIUM CACODYLATE PH 6.5 .' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength 0.978 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YGN _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 1.85 _reflns.number_obs 17655 _reflns.number_all ? _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.30 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 91.3 _reflns_shell.Rmerge_I_obs 0.70 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.40 _reflns_shell.pdbx_redundancy 3.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YGN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16407 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.529 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs 92.48 _refine.ls_R_factor_obs 0.2050 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2039 _refine.ls_R_factor_R_free 0.2239 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 828 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 18.7533 _refine.aniso_B[2][2] -13.9848 _refine.aniso_B[3][3] -4.7685 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.353 _refine.solvent_model_param_bsol 43.123 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.83 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2D3J' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.22 _refine.pdbx_overall_phase_error 26.39 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1151 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 68 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 1302 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 27.529 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.015 ? ? 1245 'X-RAY DIFFRACTION' ? f_angle_d 2.224 ? ? 1673 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.154 ? ? 483 'X-RAY DIFFRACTION' ? f_chiral_restr 0.141 ? ? 186 'X-RAY DIFFRACTION' ? f_plane_restr 0.009 ? ? 202 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.8501 1.9660 2107 0.3366 77.00 0.4037 . . 126 . . 'X-RAY DIFFRACTION' . 1.9660 2.1177 2466 0.2448 89.00 0.3191 . . 134 . . 'X-RAY DIFFRACTION' . 2.1177 2.3307 2572 0.2179 93.00 0.2565 . . 150 . . 'X-RAY DIFFRACTION' . 2.3307 2.6678 2701 0.2077 97.00 0.2461 . . 136 . . 'X-RAY DIFFRACTION' . 2.6678 3.3602 2795 0.1894 99.00 0.2338 . . 140 . . 'X-RAY DIFFRACTION' . 3.3602 27.5318 2938 0.1869 100.00 0.1713 . . 142 . . # _struct.entry_id 2YGN _struct.title 'WIF domain of human Wnt inhibitory factor 1 in complex with 1,2- dipalmitoylphosphatidylcholine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YGN _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'SIGNALING PROTEIN, WNT SIGNALING PATHWAY, WNT ANTAGONIST, MORPHOGEN, CANCER, GLYCOSAMINOGLYCAN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 10 ? GLY A 19 ? ASP A 41 GLY A 50 1 ? 10 HELX_P HELX_P2 2 PRO A 34 ? HIS A 37 ? PRO A 65 HIS A 68 5 ? 4 HELX_P HELX_P3 3 ASP A 38 ? ARG A 45 ? ASP A 69 ARG A 76 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 109 SG ? ? ? 1_555 A CYS 146 SG ? ? A CYS 140 A CYS 177 1_555 ? ? ? ? ? ? ? 2.034 ? ? covale1 covale both ? A GLY 30 C ? ? ? 1_555 A MLY 31 N ? ? A GLY 61 A MLY 62 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale both ? A MLY 31 C ? ? ? 1_555 A MET 32 N ? ? A MLY 62 A MET 63 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale3 covale both ? A ARG 40 C ? ? ? 1_555 A MLY 41 N ? ? A ARG 71 A MLY 72 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale4 covale both ? A MLY 41 C ? ? ? 1_555 A ALA 42 N ? ? A MLY 72 A ALA 73 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale5 covale one ? A ASN 57 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 88 A NAG 1180 1_555 ? ? ? ? ? ? ? 1.448 ? N-Glycosylation covale6 covale both ? A ASP 79 C ? ? ? 1_555 A MLY 80 N ? ? A ASP 110 A MLY 111 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale7 covale both ? A MLY 80 C ? ? ? 1_555 A GLY 81 N ? ? A MLY 111 A GLY 112 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale8 covale both ? A HIS 98 C ? ? ? 1_555 A MLY 99 N ? ? A HIS 129 A MLY 130 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A MLY 99 C ? ? ? 1_555 A ALA 100 N ? ? A MLY 130 A ALA 131 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale10 covale both ? A GLY 111 C ? ? ? 1_555 A MLY 112 N ? ? A GLY 142 A MLY 143 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale11 covale both ? A MLY 112 C ? ? ? 1_555 A GLN 113 N ? ? A MLY 143 A GLN 144 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale12 covale both ? A LEU 134 C ? ? ? 1_555 A MLY 135 N ? ? A LEU 165 A MLY 166 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale13 covale both ? A MLY 135 C ? ? ? 1_555 A THR 136 N ? ? A MLY 166 A THR 167 1_555 ? ? ? ? ? ? ? 1.331 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 4 ? AC ? 4 ? AD ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel AD 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 MLY A 31 ? MET A 32 ? MLY A 62 MET A 63 AA 2 ILE A 24 ? SER A 28 ? ILE A 55 SER A 59 AA 3 LEU A 5 ? ILE A 9 ? LEU A 36 ILE A 40 AA 4 SER A 55 ? ALA A 62 ? SER A 86 ALA A 93 AA 5 SER A 101 ? GLY A 106 ? SER A 132 GLY A 137 AA 6 THR A 87 ? VAL A 88 ? THR A 118 VAL A 119 AB 1 LEU A 93 ? THR A 95 ? LEU A 124 THR A 126 AB 2 TYR A 68 ? SER A 77 ? TYR A 99 SER A 108 AB 3 GLY A 115 ? ASN A 127 ? GLY A 146 ASN A 158 AB 4 THR A 132 ? MLY A 135 ? THR A 163 MLY A 166 AC 1 LEU A 93 ? THR A 95 ? LEU A 124 THR A 126 AC 2 TYR A 68 ? SER A 77 ? TYR A 99 SER A 108 AC 3 GLY A 115 ? ASN A 127 ? GLY A 146 ASN A 158 AC 4 PHE A 142 ? CYS A 146 ? PHE A 173 CYS A 177 AD 1 THR A 132 ? MLY A 135 ? THR A 163 MLY A 166 AD 2 GLY A 115 ? ASN A 127 ? GLY A 146 ASN A 158 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N MLY A 31 ? N MLY A 62 O SER A 28 ? O SER A 59 AA 2 3 N ILE A 26 ? N ILE A 57 O LEU A 7 ? O LEU A 38 AA 3 4 N TRP A 8 ? N TRP A 39 O THR A 59 ? O THR A 90 AA 4 5 N TRP A 60 ? N TRP A 91 O SER A 101 ? O SER A 132 AA 5 6 N GLY A 106 ? N GLY A 137 O THR A 87 ? O THR A 118 AB 1 2 N GLY A 94 ? N GLY A 125 O TYR A 70 ? O TYR A 101 AB 2 3 N ARG A 76 ? N ARG A 107 O GLU A 120 ? O GLU A 151 AB 3 4 O VAL A 125 ? O VAL A 156 N ILE A 133 ? N ILE A 164 AC 1 2 N GLY A 94 ? N GLY A 125 O TYR A 70 ? O TYR A 101 AC 2 3 N ARG A 76 ? N ARG A 107 O GLU A 120 ? O GLU A 151 AC 3 4 N PHE A 119 ? N PHE A 150 O PHE A 142 ? O PHE A 173 AD 1 2 N ILE A 133 ? N ILE A 164 O VAL A 125 ? O VAL A 156 # _database_PDB_matrix.entry_id 2YGN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YGN _atom_sites.fract_transf_matrix[1][1] 0.020035 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007455 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016562 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 32 ? ? ? A . n A 1 2 THR 2 33 33 THR THR A . n A 1 3 GLY 3 34 34 GLY GLY A . n A 1 4 SER 4 35 35 SER SER A . n A 1 5 LEU 5 36 36 LEU LEU A . n A 1 6 TYR 6 37 37 TYR TYR A . n A 1 7 LEU 7 38 38 LEU LEU A . n A 1 8 TRP 8 39 39 TRP TRP A . n A 1 9 ILE 9 40 40 ILE ILE A . n A 1 10 ASP 10 41 41 ASP ASP A . n A 1 11 ALA 11 42 42 ALA ALA A . n A 1 12 HIS 12 43 43 HIS HIS A . n A 1 13 GLN 13 44 44 GLN GLN A . n A 1 14 ALA 14 45 45 ALA ALA A . n A 1 15 ARG 15 46 46 ARG ARG A . n A 1 16 VAL 16 47 47 VAL VAL A . n A 1 17 LEU 17 48 48 LEU LEU A . n A 1 18 ILE 18 49 49 ILE ILE A . n A 1 19 GLY 19 50 50 GLY GLY A . n A 1 20 PHE 20 51 51 PHE PHE A . n A 1 21 GLU 21 52 52 GLU GLU A . n A 1 22 GLU 22 53 53 GLU GLU A . n A 1 23 ASP 23 54 54 ASP ASP A . n A 1 24 ILE 24 55 55 ILE ILE A . n A 1 25 LEU 25 56 56 LEU LEU A . n A 1 26 ILE 26 57 57 ILE ILE A . n A 1 27 VAL 27 58 58 VAL VAL A . n A 1 28 SER 28 59 59 SER SER A . n A 1 29 GLU 29 60 60 GLU GLU A . n A 1 30 GLY 30 61 61 GLY GLY A . n A 1 31 MLY 31 62 62 MLY MLY A . n A 1 32 MET 32 63 63 MET MET A . n A 1 33 ALA 33 64 64 ALA ALA A . n A 1 34 PRO 34 65 65 PRO PRO A . n A 1 35 PHE 35 66 66 PHE PHE A . n A 1 36 THR 36 67 67 THR THR A . n A 1 37 HIS 37 68 68 HIS HIS A . n A 1 38 ASP 38 69 69 ASP ASP A . n A 1 39 PHE 39 70 70 PHE PHE A . n A 1 40 ARG 40 71 71 ARG ARG A . n A 1 41 MLY 41 72 72 MLY MLY A . n A 1 42 ALA 42 73 73 ALA ALA A . n A 1 43 GLN 43 74 74 GLN GLN A . n A 1 44 GLN 44 75 75 GLN GLN A . n A 1 45 ARG 45 76 76 ARG ARG A . n A 1 46 MET 46 77 77 MET MET A . n A 1 47 PRO 47 78 78 PRO PRO A . n A 1 48 ALA 48 79 79 ALA ALA A . n A 1 49 ILE 49 80 80 ILE ILE A . n A 1 50 PRO 50 81 81 PRO PRO A . n A 1 51 VAL 51 82 82 VAL VAL A . n A 1 52 ASN 52 83 83 ASN ASN A . n A 1 53 ILE 53 84 84 ILE ILE A . n A 1 54 HIS 54 85 85 HIS HIS A . n A 1 55 SER 55 86 86 SER SER A . n A 1 56 MET 56 87 87 MET MET A . n A 1 57 ASN 57 88 88 ASN ASN A . n A 1 58 PHE 58 89 89 PHE PHE A . n A 1 59 THR 59 90 90 THR THR A . n A 1 60 TRP 60 91 91 TRP TRP A . n A 1 61 GLN 61 92 92 GLN GLN A . n A 1 62 ALA 62 93 93 ALA ALA A . n A 1 63 ALA 63 94 94 ALA ALA A . n A 1 64 GLY 64 95 95 GLY GLY A . n A 1 65 GLN 65 96 96 GLN GLN A . n A 1 66 ALA 66 97 97 ALA ALA A . n A 1 67 GLU 67 98 98 GLU GLU A . n A 1 68 TYR 68 99 99 TYR TYR A . n A 1 69 PHE 69 100 100 PHE PHE A . n A 1 70 TYR 70 101 101 TYR TYR A . n A 1 71 GLU 71 102 102 GLU GLU A . n A 1 72 PHE 72 103 103 PHE PHE A . n A 1 73 LEU 73 104 104 LEU LEU A . n A 1 74 SER 74 105 105 SER SER A . n A 1 75 LEU 75 106 106 LEU LEU A . n A 1 76 ARG 76 107 107 ARG ARG A . n A 1 77 SER 77 108 108 SER SER A . n A 1 78 LEU 78 109 109 LEU LEU A . n A 1 79 ASP 79 110 110 ASP ASP A . n A 1 80 MLY 80 111 111 MLY MLY A . n A 1 81 GLY 81 112 112 GLY GLY A . n A 1 82 ILE 82 113 113 ILE ILE A . n A 1 83 MET 83 114 114 MET MET A . n A 1 84 ALA 84 115 115 ALA ALA A . n A 1 85 ASP 85 116 116 ASP ASP A . n A 1 86 PRO 86 117 117 PRO PRO A . n A 1 87 THR 87 118 118 THR THR A . n A 1 88 VAL 88 119 119 VAL VAL A . n A 1 89 ASN 89 120 120 ASN ASN A . n A 1 90 VAL 90 121 121 VAL VAL A . n A 1 91 PRO 91 122 122 PRO PRO A . n A 1 92 LEU 92 123 123 LEU LEU A . n A 1 93 LEU 93 124 124 LEU LEU A . n A 1 94 GLY 94 125 125 GLY GLY A . n A 1 95 THR 95 126 126 THR THR A . n A 1 96 VAL 96 127 127 VAL VAL A . n A 1 97 PRO 97 128 128 PRO PRO A . n A 1 98 HIS 98 129 129 HIS HIS A . n A 1 99 MLY 99 130 130 MLY MLY A . n A 1 100 ALA 100 131 131 ALA ALA A . n A 1 101 SER 101 132 132 SER SER A . n A 1 102 VAL 102 133 133 VAL VAL A . n A 1 103 VAL 103 134 134 VAL VAL A . n A 1 104 GLN 104 135 135 GLN GLN A . n A 1 105 VAL 105 136 136 VAL VAL A . n A 1 106 GLY 106 137 137 GLY GLY A . n A 1 107 PHE 107 138 138 PHE PHE A . n A 1 108 PRO 108 139 139 PRO PRO A . n A 1 109 CYS 109 140 140 CYS CYS A . n A 1 110 LEU 110 141 141 LEU LEU A . n A 1 111 GLY 111 142 142 GLY GLY A . n A 1 112 MLY 112 143 143 MLY MLY A . n A 1 113 GLN 113 144 144 GLN GLN A . n A 1 114 ASP 114 145 145 ASP ASP A . n A 1 115 GLY 115 146 146 GLY GLY A . n A 1 116 VAL 116 147 147 VAL VAL A . n A 1 117 ALA 117 148 148 ALA ALA A . n A 1 118 ALA 118 149 149 ALA ALA A . n A 1 119 PHE 119 150 150 PHE PHE A . n A 1 120 GLU 120 151 151 GLU GLU A . n A 1 121 VAL 121 152 152 VAL VAL A . n A 1 122 ASP 122 153 153 ASP ASP A . n A 1 123 VAL 123 154 154 VAL VAL A . n A 1 124 ILE 124 155 155 ILE ILE A . n A 1 125 VAL 125 156 156 VAL VAL A . n A 1 126 MET 126 157 157 MET MET A . n A 1 127 ASN 127 158 158 ASN ASN A . n A 1 128 SER 128 159 159 SER SER A . n A 1 129 GLU 129 160 160 GLU GLU A . n A 1 130 GLY 130 161 161 GLY GLY A . n A 1 131 ASN 131 162 162 ASN ASN A . n A 1 132 THR 132 163 163 THR THR A . n A 1 133 ILE 133 164 164 ILE ILE A . n A 1 134 LEU 134 165 165 LEU LEU A . n A 1 135 MLY 135 166 166 MLY MLY A . n A 1 136 THR 136 167 167 THR THR A . n A 1 137 PRO 137 168 168 PRO PRO A . n A 1 138 GLN 138 169 169 GLN GLN A . n A 1 139 ASN 139 170 170 ASN ASN A . n A 1 140 ALA 140 171 171 ALA ALA A . n A 1 141 ILE 141 172 172 ILE ILE A . n A 1 142 PHE 142 173 173 PHE PHE A . n A 1 143 PHE 143 174 174 PHE PHE A . n A 1 144 LYS 144 175 175 LYS LYS A . n A 1 145 THR 145 176 176 THR THR A . n A 1 146 CYS 146 177 177 CYS CYS A . n A 1 147 GLN 147 178 178 GLN GLN A . n A 1 148 GLY 148 179 ? ? ? A . n A 1 149 THR 149 180 ? ? ? A . n A 1 150 LYS 150 181 ? ? ? A . n A 1 151 HIS 151 182 ? ? ? A . n A 1 152 HIS 152 183 ? ? ? A . n A 1 153 HIS 153 184 ? ? ? A . n A 1 154 HIS 154 185 ? ? ? A . n A 1 155 HIS 155 186 ? ? ? A . n A 1 156 HIS 156 187 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PCF 1 1179 1179 PCF PCF A . C 3 NAG 1 1180 1180 NAG NAG A . D 4 ACT 1 1181 1181 ACT ACT A . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . E 5 HOH 27 2027 2027 HOH HOH A . E 5 HOH 28 2028 2028 HOH HOH A . E 5 HOH 29 2029 2029 HOH HOH A . E 5 HOH 30 2030 2030 HOH HOH A . E 5 HOH 31 2031 2031 HOH HOH A . E 5 HOH 32 2032 2032 HOH HOH A . E 5 HOH 33 2033 2033 HOH HOH A . E 5 HOH 34 2034 2034 HOH HOH A . E 5 HOH 35 2035 2035 HOH HOH A . E 5 HOH 36 2036 2036 HOH HOH A . E 5 HOH 37 2037 2037 HOH HOH A . E 5 HOH 38 2038 2038 HOH HOH A . E 5 HOH 39 2039 2039 HOH HOH A . E 5 HOH 40 2040 2040 HOH HOH A . E 5 HOH 41 2041 2041 HOH HOH A . E 5 HOH 42 2042 2042 HOH HOH A . E 5 HOH 43 2043 2043 HOH HOH A . E 5 HOH 44 2044 2044 HOH HOH A . E 5 HOH 45 2045 2045 HOH HOH A . E 5 HOH 46 2046 2046 HOH HOH A . E 5 HOH 47 2047 2047 HOH HOH A . E 5 HOH 48 2048 2048 HOH HOH A . E 5 HOH 49 2049 2049 HOH HOH A . E 5 HOH 50 2050 2050 HOH HOH A . E 5 HOH 51 2051 2051 HOH HOH A . E 5 HOH 52 2052 2052 HOH HOH A . E 5 HOH 53 2053 2053 HOH HOH A . E 5 HOH 54 2054 2054 HOH HOH A . E 5 HOH 55 2055 2055 HOH HOH A . E 5 HOH 56 2056 2056 HOH HOH A . E 5 HOH 57 2057 2057 HOH HOH A . E 5 HOH 58 2058 2058 HOH HOH A . E 5 HOH 59 2059 2059 HOH HOH A . E 5 HOH 60 2060 2060 HOH HOH A . E 5 HOH 61 2061 2061 HOH HOH A . E 5 HOH 62 2062 2062 HOH HOH A . E 5 HOH 63 2063 2063 HOH HOH A . E 5 HOH 64 2064 2064 HOH HOH A . E 5 HOH 65 2065 2065 HOH HOH A . E 5 HOH 66 2066 2066 HOH HOH A . E 5 HOH 67 2067 2067 HOH HOH A . E 5 HOH 68 2068 2068 HOH HOH A . E 5 HOH 69 2069 2069 HOH HOH A . E 5 HOH 70 2070 2070 HOH HOH A . E 5 HOH 71 2071 2071 HOH HOH A . E 5 HOH 72 2072 2072 HOH HOH A . E 5 HOH 73 2073 2073 HOH HOH A . E 5 HOH 74 2074 2074 HOH HOH A . E 5 HOH 75 2075 2075 HOH HOH A . E 5 HOH 76 2076 2076 HOH HOH A . E 5 HOH 77 2077 2077 HOH HOH A . E 5 HOH 78 2078 2078 HOH HOH A . E 5 HOH 79 2079 2079 HOH HOH A . E 5 HOH 80 2080 2080 HOH HOH A . E 5 HOH 81 2081 2081 HOH HOH A . E 5 HOH 82 2082 2082 HOH HOH A . E 5 HOH 83 2083 2083 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 57 A ASN 88 ? ASN 'GLYCOSYLATION SITE' 2 A MLY 31 A MLY 62 ? LYS N-DIMETHYL-LYSINE 3 A MLY 41 A MLY 72 ? LYS N-DIMETHYL-LYSINE 4 A MLY 80 A MLY 111 ? LYS N-DIMETHYL-LYSINE 5 A MLY 99 A MLY 130 ? LYS N-DIMETHYL-LYSINE 6 A MLY 112 A MLY 143 ? LYS N-DIMETHYL-LYSINE 7 A MLY 135 A MLY 166 ? LYS N-DIMETHYL-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5110 ? 1 MORE -44.2 ? 1 'SSA (A^2)' 15650 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_445 -x-1/2,-y-1/2,z -1.0000000000 0.0000000000 0.0000000000 -24.9560000000 0.0000000000 -1.0000000000 0.0000000000 -67.0690000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-20 2 'Structure model' 1 1 2011-08-17 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' Other 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_entity_nonpoly 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site 8 3 'Structure model' struct_site_gen 9 4 'Structure model' chem_comp 10 4 'Structure model' chem_comp_atom 11 4 'Structure model' chem_comp_bond 12 4 'Structure model' database_2 13 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_entity.pdbx_description' 4 3 'Structure model' '_pdbx_database_status.status_code_sf' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 3 'Structure model' '_struct_conn.pdbx_role' 8 4 'Structure model' '_chem_comp.pdbx_synonyms' 9 4 'Structure model' '_database_2.pdbx_DOI' 10 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -3.1903 _pdbx_refine_tls.origin_y -17.5302 _pdbx_refine_tls.origin_z 15.0452 _pdbx_refine_tls.T[1][1] 0.2686 _pdbx_refine_tls.T[2][2] 0.2520 _pdbx_refine_tls.T[3][3] 0.2591 _pdbx_refine_tls.T[1][2] -0.0200 _pdbx_refine_tls.T[1][3] -0.0189 _pdbx_refine_tls.T[2][3] -0.0023 _pdbx_refine_tls.L[1][1] 1.5263 _pdbx_refine_tls.L[2][2] 1.0058 _pdbx_refine_tls.L[3][3] 1.5368 _pdbx_refine_tls.L[1][2] 0.0931 _pdbx_refine_tls.L[1][3] 0.1551 _pdbx_refine_tls.L[2][3] -0.4158 _pdbx_refine_tls.S[1][1] -0.0456 _pdbx_refine_tls.S[1][2] -0.0482 _pdbx_refine_tls.S[1][3] 0.1734 _pdbx_refine_tls.S[2][1] 0.0093 _pdbx_refine_tls.S[2][2] 0.0150 _pdbx_refine_tls.S[2][3] -0.0629 _pdbx_refine_tls.S[3][1] -0.3150 _pdbx_refine_tls.S[3][2] 0.0817 _pdbx_refine_tls.S[3][3] 0.0000 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ALL # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE: 1.7_650)' ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 2YGN _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;ISOFORM Q166K. CRYSTALLISATION CONSTRUCT CONTAINS N- TERMINAL ETG AND C-TERMINAL GTKHHHHHH AMINO ACID RESIDUES DERIVED FROM THE EXPRESSION VECTOR. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 32 ? A GLU 1 2 1 Y 1 A GLY 179 ? A GLY 148 3 1 Y 1 A THR 180 ? A THR 149 4 1 Y 1 A LYS 181 ? A LYS 150 5 1 Y 1 A HIS 182 ? A HIS 151 6 1 Y 1 A HIS 183 ? A HIS 152 7 1 Y 1 A HIS 184 ? A HIS 153 8 1 Y 1 A HIS 185 ? A HIS 154 9 1 Y 1 A HIS 186 ? A HIS 155 10 1 Y 1 A HIS 187 ? A HIS 156 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 MLY N N N N 257 MLY CA C N S 258 MLY CB C N N 259 MLY CG C N N 260 MLY CD C N N 261 MLY CE C N N 262 MLY NZ N N N 263 MLY CH1 C N N 264 MLY CH2 C N N 265 MLY C C N N 266 MLY O O N N 267 MLY OXT O N N 268 MLY H H N N 269 MLY H2 H N N 270 MLY HA H N N 271 MLY HB2 H N N 272 MLY HB3 H N N 273 MLY HG2 H N N 274 MLY HG3 H N N 275 MLY HD2 H N N 276 MLY HD3 H N N 277 MLY HE2 H N N 278 MLY HE3 H N N 279 MLY HH11 H N N 280 MLY HH12 H N N 281 MLY HH13 H N N 282 MLY HH21 H N N 283 MLY HH22 H N N 284 MLY HH23 H N N 285 MLY HXT H N N 286 NAG C1 C N R 287 NAG C2 C N R 288 NAG C3 C N R 289 NAG C4 C N S 290 NAG C5 C N R 291 NAG C6 C N N 292 NAG C7 C N N 293 NAG C8 C N N 294 NAG N2 N N N 295 NAG O1 O N N 296 NAG O3 O N N 297 NAG O4 O N N 298 NAG O5 O N N 299 NAG O6 O N N 300 NAG O7 O N N 301 NAG H1 H N N 302 NAG H2 H N N 303 NAG H3 H N N 304 NAG H4 H N N 305 NAG H5 H N N 306 NAG H61 H N N 307 NAG H62 H N N 308 NAG H81 H N N 309 NAG H82 H N N 310 NAG H83 H N N 311 NAG HN2 H N N 312 NAG HO1 H N N 313 NAG HO3 H N N 314 NAG HO4 H N N 315 NAG HO6 H N N 316 PCF N N N N 317 PCF P P N N 318 PCF O11 O N N 319 PCF O12 O N N 320 PCF O13 O N N 321 PCF O14 O N N 322 PCF C11 C N N 323 PCF C12 C N N 324 PCF C13 C N N 325 PCF C14 C N N 326 PCF C15 C N N 327 PCF C1 C N N 328 PCF C2 C N R 329 PCF C3 C N N 330 PCF O31 O N N 331 PCF O32 O N N 332 PCF C31 C N N 333 PCF C32 C N N 334 PCF C33 C N N 335 PCF C34 C N N 336 PCF C35 C N N 337 PCF C36 C N N 338 PCF C37 C N N 339 PCF C38 C N N 340 PCF C39 C N N 341 PCF C40 C N N 342 PCF C41 C N N 343 PCF C42 C N N 344 PCF C43 C N N 345 PCF O21 O N N 346 PCF O22 O N N 347 PCF C21 C N N 348 PCF C22 C N N 349 PCF C23 C N N 350 PCF C24 C N N 351 PCF C25 C N N 352 PCF C26 C N N 353 PCF C27 C N N 354 PCF C28 C N N 355 PCF C29 C N N 356 PCF C30 C N N 357 PCF C47 C N N 358 PCF C48 C N N 359 PCF C49 C N N 360 PCF C50 C N N 361 PCF C51 C N N 362 PCF C52 C N N 363 PCF C44 C N N 364 PCF C45 C N N 365 PCF C46 C N N 366 PCF H111 H N N 367 PCF H112 H N N 368 PCF H121 H N N 369 PCF H122 H N N 370 PCF H131 H N N 371 PCF H132 H N N 372 PCF H133 H N N 373 PCF H141 H N N 374 PCF H142 H N N 375 PCF H143 H N N 376 PCF H151 H N N 377 PCF H152 H N N 378 PCF H153 H N N 379 PCF H11 H N N 380 PCF H12 H N N 381 PCF H21 H N N 382 PCF H31 H N N 383 PCF H32 H N N 384 PCF H321 H N N 385 PCF H322 H N N 386 PCF H331 H N N 387 PCF H332 H N N 388 PCF H341 H N N 389 PCF H342 H N N 390 PCF H351 H N N 391 PCF H352 H N N 392 PCF H361 H N N 393 PCF H362 H N N 394 PCF H371 H N N 395 PCF H372 H N N 396 PCF H381 H N N 397 PCF H382 H N N 398 PCF H391 H N N 399 PCF H392 H N N 400 PCF H401 H N N 401 PCF H402 H N N 402 PCF H411 H N N 403 PCF H412 H N N 404 PCF H421 H N N 405 PCF H422 H N N 406 PCF H431 H N N 407 PCF H432 H N N 408 PCF H221 H N N 409 PCF H222 H N N 410 PCF H231 H N N 411 PCF H232 H N N 412 PCF H241 H N N 413 PCF H242 H N N 414 PCF H251 H N N 415 PCF H252 H N N 416 PCF H261 H N N 417 PCF H262 H N N 418 PCF H271 H N N 419 PCF H272 H N N 420 PCF H281 H N N 421 PCF H282 H N N 422 PCF H291 H N N 423 PCF H292 H N N 424 PCF H301 H N N 425 PCF H302 H N N 426 PCF H471 H N N 427 PCF H472 H N N 428 PCF H481 H N N 429 PCF H482 H N N 430 PCF H491 H N N 431 PCF H492 H N N 432 PCF H501 H N N 433 PCF H502 H N N 434 PCF H511 H N N 435 PCF H512 H N N 436 PCF H521 H N N 437 PCF H522 H N N 438 PCF H523 H N N 439 PCF H441 H N N 440 PCF H442 H N N 441 PCF H451 H N N 442 PCF H452 H N N 443 PCF H461 H N N 444 PCF H462 H N N 445 PCF H463 H N N 446 PHE N N N N 447 PHE CA C N S 448 PHE C C N N 449 PHE O O N N 450 PHE CB C N N 451 PHE CG C Y N 452 PHE CD1 C Y N 453 PHE CD2 C Y N 454 PHE CE1 C Y N 455 PHE CE2 C Y N 456 PHE CZ C Y N 457 PHE OXT O N N 458 PHE H H N N 459 PHE H2 H N N 460 PHE HA H N N 461 PHE HB2 H N N 462 PHE HB3 H N N 463 PHE HD1 H N N 464 PHE HD2 H N N 465 PHE HE1 H N N 466 PHE HE2 H N N 467 PHE HZ H N N 468 PHE HXT H N N 469 PRO N N N N 470 PRO CA C N S 471 PRO C C N N 472 PRO O O N N 473 PRO CB C N N 474 PRO CG C N N 475 PRO CD C N N 476 PRO OXT O N N 477 PRO H H N N 478 PRO HA H N N 479 PRO HB2 H N N 480 PRO HB3 H N N 481 PRO HG2 H N N 482 PRO HG3 H N N 483 PRO HD2 H N N 484 PRO HD3 H N N 485 PRO HXT H N N 486 SER N N N N 487 SER CA C N S 488 SER C C N N 489 SER O O N N 490 SER CB C N N 491 SER OG O N N 492 SER OXT O N N 493 SER H H N N 494 SER H2 H N N 495 SER HA H N N 496 SER HB2 H N N 497 SER HB3 H N N 498 SER HG H N N 499 SER HXT H N N 500 THR N N N N 501 THR CA C N S 502 THR C C N N 503 THR O O N N 504 THR CB C N R 505 THR OG1 O N N 506 THR CG2 C N N 507 THR OXT O N N 508 THR H H N N 509 THR H2 H N N 510 THR HA H N N 511 THR HB H N N 512 THR HG1 H N N 513 THR HG21 H N N 514 THR HG22 H N N 515 THR HG23 H N N 516 THR HXT H N N 517 TRP N N N N 518 TRP CA C N S 519 TRP C C N N 520 TRP O O N N 521 TRP CB C N N 522 TRP CG C Y N 523 TRP CD1 C Y N 524 TRP CD2 C Y N 525 TRP NE1 N Y N 526 TRP CE2 C Y N 527 TRP CE3 C Y N 528 TRP CZ2 C Y N 529 TRP CZ3 C Y N 530 TRP CH2 C Y N 531 TRP OXT O N N 532 TRP H H N N 533 TRP H2 H N N 534 TRP HA H N N 535 TRP HB2 H N N 536 TRP HB3 H N N 537 TRP HD1 H N N 538 TRP HE1 H N N 539 TRP HE3 H N N 540 TRP HZ2 H N N 541 TRP HZ3 H N N 542 TRP HH2 H N N 543 TRP HXT H N N 544 TYR N N N N 545 TYR CA C N S 546 TYR C C N N 547 TYR O O N N 548 TYR CB C N N 549 TYR CG C Y N 550 TYR CD1 C Y N 551 TYR CD2 C Y N 552 TYR CE1 C Y N 553 TYR CE2 C Y N 554 TYR CZ C Y N 555 TYR OH O N N 556 TYR OXT O N N 557 TYR H H N N 558 TYR H2 H N N 559 TYR HA H N N 560 TYR HB2 H N N 561 TYR HB3 H N N 562 TYR HD1 H N N 563 TYR HD2 H N N 564 TYR HE1 H N N 565 TYR HE2 H N N 566 TYR HH H N N 567 TYR HXT H N N 568 VAL N N N N 569 VAL CA C N S 570 VAL C C N N 571 VAL O O N N 572 VAL CB C N N 573 VAL CG1 C N N 574 VAL CG2 C N N 575 VAL OXT O N N 576 VAL H H N N 577 VAL H2 H N N 578 VAL HA H N N 579 VAL HB H N N 580 VAL HG11 H N N 581 VAL HG12 H N N 582 VAL HG13 H N N 583 VAL HG21 H N N 584 VAL HG22 H N N 585 VAL HG23 H N N 586 VAL HXT H N N 587 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HIS N CA sing N N 135 HIS N H sing N N 136 HIS N H2 sing N N 137 HIS CA C sing N N 138 HIS CA CB sing N N 139 HIS CA HA sing N N 140 HIS C O doub N N 141 HIS C OXT sing N N 142 HIS CB CG sing N N 143 HIS CB HB2 sing N N 144 HIS CB HB3 sing N N 145 HIS CG ND1 sing Y N 146 HIS CG CD2 doub Y N 147 HIS ND1 CE1 doub Y N 148 HIS ND1 HD1 sing N N 149 HIS CD2 NE2 sing Y N 150 HIS CD2 HD2 sing N N 151 HIS CE1 NE2 sing Y N 152 HIS CE1 HE1 sing N N 153 HIS NE2 HE2 sing N N 154 HIS OXT HXT sing N N 155 HOH O H1 sing N N 156 HOH O H2 sing N N 157 ILE N CA sing N N 158 ILE N H sing N N 159 ILE N H2 sing N N 160 ILE CA C sing N N 161 ILE CA CB sing N N 162 ILE CA HA sing N N 163 ILE C O doub N N 164 ILE C OXT sing N N 165 ILE CB CG1 sing N N 166 ILE CB CG2 sing N N 167 ILE CB HB sing N N 168 ILE CG1 CD1 sing N N 169 ILE CG1 HG12 sing N N 170 ILE CG1 HG13 sing N N 171 ILE CG2 HG21 sing N N 172 ILE CG2 HG22 sing N N 173 ILE CG2 HG23 sing N N 174 ILE CD1 HD11 sing N N 175 ILE CD1 HD12 sing N N 176 ILE CD1 HD13 sing N N 177 ILE OXT HXT sing N N 178 LEU N CA sing N N 179 LEU N H sing N N 180 LEU N H2 sing N N 181 LEU CA C sing N N 182 LEU CA CB sing N N 183 LEU CA HA sing N N 184 LEU C O doub N N 185 LEU C OXT sing N N 186 LEU CB CG sing N N 187 LEU CB HB2 sing N N 188 LEU CB HB3 sing N N 189 LEU CG CD1 sing N N 190 LEU CG CD2 sing N N 191 LEU CG HG sing N N 192 LEU CD1 HD11 sing N N 193 LEU CD1 HD12 sing N N 194 LEU CD1 HD13 sing N N 195 LEU CD2 HD21 sing N N 196 LEU CD2 HD22 sing N N 197 LEU CD2 HD23 sing N N 198 LEU OXT HXT sing N N 199 LYS N CA sing N N 200 LYS N H sing N N 201 LYS N H2 sing N N 202 LYS CA C sing N N 203 LYS CA CB sing N N 204 LYS CA HA sing N N 205 LYS C O doub N N 206 LYS C OXT sing N N 207 LYS CB CG sing N N 208 LYS CB HB2 sing N N 209 LYS CB HB3 sing N N 210 LYS CG CD sing N N 211 LYS CG HG2 sing N N 212 LYS CG HG3 sing N N 213 LYS CD CE sing N N 214 LYS CD HD2 sing N N 215 LYS CD HD3 sing N N 216 LYS CE NZ sing N N 217 LYS CE HE2 sing N N 218 LYS CE HE3 sing N N 219 LYS NZ HZ1 sing N N 220 LYS NZ HZ2 sing N N 221 LYS NZ HZ3 sing N N 222 LYS OXT HXT sing N N 223 MET N CA sing N N 224 MET N H sing N N 225 MET N H2 sing N N 226 MET CA C sing N N 227 MET CA CB sing N N 228 MET CA HA sing N N 229 MET C O doub N N 230 MET C OXT sing N N 231 MET CB CG sing N N 232 MET CB HB2 sing N N 233 MET CB HB3 sing N N 234 MET CG SD sing N N 235 MET CG HG2 sing N N 236 MET CG HG3 sing N N 237 MET SD CE sing N N 238 MET CE HE1 sing N N 239 MET CE HE2 sing N N 240 MET CE HE3 sing N N 241 MET OXT HXT sing N N 242 MLY N CA sing N N 243 MLY N H sing N N 244 MLY N H2 sing N N 245 MLY CA CB sing N N 246 MLY CA C sing N N 247 MLY CA HA sing N N 248 MLY CB CG sing N N 249 MLY CB HB2 sing N N 250 MLY CB HB3 sing N N 251 MLY CG CD sing N N 252 MLY CG HG2 sing N N 253 MLY CG HG3 sing N N 254 MLY CD CE sing N N 255 MLY CD HD2 sing N N 256 MLY CD HD3 sing N N 257 MLY CE NZ sing N N 258 MLY CE HE2 sing N N 259 MLY CE HE3 sing N N 260 MLY NZ CH1 sing N N 261 MLY NZ CH2 sing N N 262 MLY CH1 HH11 sing N N 263 MLY CH1 HH12 sing N N 264 MLY CH1 HH13 sing N N 265 MLY CH2 HH21 sing N N 266 MLY CH2 HH22 sing N N 267 MLY CH2 HH23 sing N N 268 MLY C O doub N N 269 MLY C OXT sing N N 270 MLY OXT HXT sing N N 271 NAG C1 C2 sing N N 272 NAG C1 O1 sing N N 273 NAG C1 O5 sing N N 274 NAG C1 H1 sing N N 275 NAG C2 C3 sing N N 276 NAG C2 N2 sing N N 277 NAG C2 H2 sing N N 278 NAG C3 C4 sing N N 279 NAG C3 O3 sing N N 280 NAG C3 H3 sing N N 281 NAG C4 C5 sing N N 282 NAG C4 O4 sing N N 283 NAG C4 H4 sing N N 284 NAG C5 C6 sing N N 285 NAG C5 O5 sing N N 286 NAG C5 H5 sing N N 287 NAG C6 O6 sing N N 288 NAG C6 H61 sing N N 289 NAG C6 H62 sing N N 290 NAG C7 C8 sing N N 291 NAG C7 N2 sing N N 292 NAG C7 O7 doub N N 293 NAG C8 H81 sing N N 294 NAG C8 H82 sing N N 295 NAG C8 H83 sing N N 296 NAG N2 HN2 sing N N 297 NAG O1 HO1 sing N N 298 NAG O3 HO3 sing N N 299 NAG O4 HO4 sing N N 300 NAG O6 HO6 sing N N 301 PCF N C12 sing N N 302 PCF N C13 sing N N 303 PCF N C14 sing N N 304 PCF N C15 sing N N 305 PCF P O11 sing N N 306 PCF P O12 doub N N 307 PCF P O13 sing N N 308 PCF P O14 sing N N 309 PCF O11 C1 sing N N 310 PCF O13 C11 sing N N 311 PCF C11 C12 sing N N 312 PCF C11 H111 sing N N 313 PCF C11 H112 sing N N 314 PCF C12 H121 sing N N 315 PCF C12 H122 sing N N 316 PCF C13 H131 sing N N 317 PCF C13 H132 sing N N 318 PCF C13 H133 sing N N 319 PCF C14 H141 sing N N 320 PCF C14 H142 sing N N 321 PCF C14 H143 sing N N 322 PCF C15 H151 sing N N 323 PCF C15 H152 sing N N 324 PCF C15 H153 sing N N 325 PCF C1 C2 sing N N 326 PCF C1 H11 sing N N 327 PCF C1 H12 sing N N 328 PCF C2 C3 sing N N 329 PCF C2 O21 sing N N 330 PCF C2 H21 sing N N 331 PCF C3 O31 sing N N 332 PCF C3 H31 sing N N 333 PCF C3 H32 sing N N 334 PCF O31 C31 sing N N 335 PCF O32 C31 doub N N 336 PCF C31 C32 sing N N 337 PCF C32 C33 sing N N 338 PCF C32 H321 sing N N 339 PCF C32 H322 sing N N 340 PCF C33 C34 sing N N 341 PCF C33 H331 sing N N 342 PCF C33 H332 sing N N 343 PCF C34 C35 sing N N 344 PCF C34 H341 sing N N 345 PCF C34 H342 sing N N 346 PCF C35 C36 sing N N 347 PCF C35 H351 sing N N 348 PCF C35 H352 sing N N 349 PCF C36 C37 sing N N 350 PCF C36 H361 sing N N 351 PCF C36 H362 sing N N 352 PCF C37 C38 sing N N 353 PCF C37 H371 sing N N 354 PCF C37 H372 sing N N 355 PCF C38 C39 sing N N 356 PCF C38 H381 sing N N 357 PCF C38 H382 sing N N 358 PCF C39 C40 sing N N 359 PCF C39 H391 sing N N 360 PCF C39 H392 sing N N 361 PCF C40 C41 sing N N 362 PCF C40 H401 sing N N 363 PCF C40 H402 sing N N 364 PCF C41 C42 sing N N 365 PCF C41 H411 sing N N 366 PCF C41 H412 sing N N 367 PCF C42 C43 sing N N 368 PCF C42 H421 sing N N 369 PCF C42 H422 sing N N 370 PCF C43 C44 sing N N 371 PCF C43 H431 sing N N 372 PCF C43 H432 sing N N 373 PCF O21 C21 sing N N 374 PCF O22 C21 doub N N 375 PCF C21 C22 sing N N 376 PCF C22 C23 sing N N 377 PCF C22 H221 sing N N 378 PCF C22 H222 sing N N 379 PCF C23 C24 sing N N 380 PCF C23 H231 sing N N 381 PCF C23 H232 sing N N 382 PCF C24 C25 sing N N 383 PCF C24 H241 sing N N 384 PCF C24 H242 sing N N 385 PCF C25 C26 sing N N 386 PCF C25 H251 sing N N 387 PCF C25 H252 sing N N 388 PCF C26 C27 sing N N 389 PCF C26 H261 sing N N 390 PCF C26 H262 sing N N 391 PCF C27 C28 sing N N 392 PCF C27 H271 sing N N 393 PCF C27 H272 sing N N 394 PCF C28 C29 sing N N 395 PCF C28 H281 sing N N 396 PCF C28 H282 sing N N 397 PCF C29 C30 sing N N 398 PCF C29 H291 sing N N 399 PCF C29 H292 sing N N 400 PCF C30 C47 sing N N 401 PCF C30 H301 sing N N 402 PCF C30 H302 sing N N 403 PCF C47 C48 sing N N 404 PCF C47 H471 sing N N 405 PCF C47 H472 sing N N 406 PCF C48 C49 sing N N 407 PCF C48 H481 sing N N 408 PCF C48 H482 sing N N 409 PCF C49 C50 sing N N 410 PCF C49 H491 sing N N 411 PCF C49 H492 sing N N 412 PCF C50 C51 sing N N 413 PCF C50 H501 sing N N 414 PCF C50 H502 sing N N 415 PCF C51 C52 sing N N 416 PCF C51 H511 sing N N 417 PCF C51 H512 sing N N 418 PCF C52 H521 sing N N 419 PCF C52 H522 sing N N 420 PCF C52 H523 sing N N 421 PCF C44 C45 sing N N 422 PCF C44 H441 sing N N 423 PCF C44 H442 sing N N 424 PCF C45 C46 sing N N 425 PCF C45 H451 sing N N 426 PCF C45 H452 sing N N 427 PCF C46 H461 sing N N 428 PCF C46 H462 sing N N 429 PCF C46 H463 sing N N 430 PHE N CA sing N N 431 PHE N H sing N N 432 PHE N H2 sing N N 433 PHE CA C sing N N 434 PHE CA CB sing N N 435 PHE CA HA sing N N 436 PHE C O doub N N 437 PHE C OXT sing N N 438 PHE CB CG sing N N 439 PHE CB HB2 sing N N 440 PHE CB HB3 sing N N 441 PHE CG CD1 doub Y N 442 PHE CG CD2 sing Y N 443 PHE CD1 CE1 sing Y N 444 PHE CD1 HD1 sing N N 445 PHE CD2 CE2 doub Y N 446 PHE CD2 HD2 sing N N 447 PHE CE1 CZ doub Y N 448 PHE CE1 HE1 sing N N 449 PHE CE2 CZ sing Y N 450 PHE CE2 HE2 sing N N 451 PHE CZ HZ sing N N 452 PHE OXT HXT sing N N 453 PRO N CA sing N N 454 PRO N CD sing N N 455 PRO N H sing N N 456 PRO CA C sing N N 457 PRO CA CB sing N N 458 PRO CA HA sing N N 459 PRO C O doub N N 460 PRO C OXT sing N N 461 PRO CB CG sing N N 462 PRO CB HB2 sing N N 463 PRO CB HB3 sing N N 464 PRO CG CD sing N N 465 PRO CG HG2 sing N N 466 PRO CG HG3 sing N N 467 PRO CD HD2 sing N N 468 PRO CD HD3 sing N N 469 PRO OXT HXT sing N N 470 SER N CA sing N N 471 SER N H sing N N 472 SER N H2 sing N N 473 SER CA C sing N N 474 SER CA CB sing N N 475 SER CA HA sing N N 476 SER C O doub N N 477 SER C OXT sing N N 478 SER CB OG sing N N 479 SER CB HB2 sing N N 480 SER CB HB3 sing N N 481 SER OG HG sing N N 482 SER OXT HXT sing N N 483 THR N CA sing N N 484 THR N H sing N N 485 THR N H2 sing N N 486 THR CA C sing N N 487 THR CA CB sing N N 488 THR CA HA sing N N 489 THR C O doub N N 490 THR C OXT sing N N 491 THR CB OG1 sing N N 492 THR CB CG2 sing N N 493 THR CB HB sing N N 494 THR OG1 HG1 sing N N 495 THR CG2 HG21 sing N N 496 THR CG2 HG22 sing N N 497 THR CG2 HG23 sing N N 498 THR OXT HXT sing N N 499 TRP N CA sing N N 500 TRP N H sing N N 501 TRP N H2 sing N N 502 TRP CA C sing N N 503 TRP CA CB sing N N 504 TRP CA HA sing N N 505 TRP C O doub N N 506 TRP C OXT sing N N 507 TRP CB CG sing N N 508 TRP CB HB2 sing N N 509 TRP CB HB3 sing N N 510 TRP CG CD1 doub Y N 511 TRP CG CD2 sing Y N 512 TRP CD1 NE1 sing Y N 513 TRP CD1 HD1 sing N N 514 TRP CD2 CE2 doub Y N 515 TRP CD2 CE3 sing Y N 516 TRP NE1 CE2 sing Y N 517 TRP NE1 HE1 sing N N 518 TRP CE2 CZ2 sing Y N 519 TRP CE3 CZ3 doub Y N 520 TRP CE3 HE3 sing N N 521 TRP CZ2 CH2 doub Y N 522 TRP CZ2 HZ2 sing N N 523 TRP CZ3 CH2 sing Y N 524 TRP CZ3 HZ3 sing N N 525 TRP CH2 HH2 sing N N 526 TRP OXT HXT sing N N 527 TYR N CA sing N N 528 TYR N H sing N N 529 TYR N H2 sing N N 530 TYR CA C sing N N 531 TYR CA CB sing N N 532 TYR CA HA sing N N 533 TYR C O doub N N 534 TYR C OXT sing N N 535 TYR CB CG sing N N 536 TYR CB HB2 sing N N 537 TYR CB HB3 sing N N 538 TYR CG CD1 doub Y N 539 TYR CG CD2 sing Y N 540 TYR CD1 CE1 sing Y N 541 TYR CD1 HD1 sing N N 542 TYR CD2 CE2 doub Y N 543 TYR CD2 HD2 sing N N 544 TYR CE1 CZ doub Y N 545 TYR CE1 HE1 sing N N 546 TYR CE2 CZ sing Y N 547 TYR CE2 HE2 sing N N 548 TYR CZ OH sing N N 549 TYR OH HH sing N N 550 TYR OXT HXT sing N N 551 VAL N CA sing N N 552 VAL N H sing N N 553 VAL N H2 sing N N 554 VAL CA C sing N N 555 VAL CA CB sing N N 556 VAL CA HA sing N N 557 VAL C O doub N N 558 VAL C OXT sing N N 559 VAL CB CG1 sing N N 560 VAL CB CG2 sing N N 561 VAL CB HB sing N N 562 VAL CG1 HG11 sing N N 563 VAL CG1 HG12 sing N N 564 VAL CG1 HG13 sing N N 565 VAL CG2 HG21 sing N N 566 VAL CG2 HG22 sing N N 567 VAL CG2 HG23 sing N N 568 VAL OXT HXT sing N N 569 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE PCF 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 'ACETATE ION' ACT 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2D3J _pdbx_initial_refinement_model.details 'PDB ENTRY 2D3J' #