data_2YHA # _entry.id 2YHA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YHA pdb_00002yha 10.2210/pdb2yha/pdb PDBE EBI-48146 ? ? WWPDB D_1290048146 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2XDY unspecified 'CRYSTAL STRUCTURE OF THE N. CRASSA QDE-2 MID DOMAIN RELATED ENTRIES' PDB 2YHB unspecified 'CRYSTAL STRUCTURE OF THE N. CRASSA QDE-2 AGO MID- PIWI DOMAINS' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YHA _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-04-27 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Boland, A.' 1 'Weichenrieder, O.' 2 # _citation.id primary _citation.title 'Crystal Structure of the Mid-Piwi Lobe of a Eukaryotic Argonaute Protein' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 108 _citation.page_first 10466 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21646546 _citation.pdbx_database_id_DOI 10.1073/PNAS.1103946108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Boland, A.' 1 ? primary 'Huntzinger, E.' 2 ? primary 'Schmidt, S.' 3 ? primary 'Izaurralde, E.' 4 ? primary 'Weichenriede, O.' 5 ? # _cell.entry_id 2YHA _cell.length_a 63.080 _cell.length_b 63.080 _cell.length_c 170.470 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YHA _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'POST-TRANSCRIPTIONAL GENE SILENCING PROTEIN QDE-2' 42986.453 1 ? ? 'MID-PIWI DOMAINS, RESIDUES 506-786 AND 839-938' 'RESIDUES 787-838 REPLACED BY THREE-RESIDUE LINKER' 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 213 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMAVKVARPCRKIEKWTYLELKGSKANEGVPQAMTAFAEFLNRTGIPINPRFSPGMSMSVPGSEKEFFAKVKELMSSHQ FVVVLLPRKDVAIYNMVKRAADITFGVHTVCCVAEKFLSTKGQLGYFANVGLKVNLKFGGTNHNIKTPIPLLAKGKTMVV GYDVTHPTNLAAGQSPASAPSIVGLVSTIDQHLGQWPAMVWNNPHGQESMTEQFTDKFKTRLELWRSNPANNRSLPENIL IFRDGVSEGQFQMVIKDELPLVRAACKLVYPAGKLPRITLIVSVKGSGSAHYTVLVDEIFRADYGNKAADTLEQLTHDMC YLFGRATKAVSICPPAYYADLVCDRARIHQKELFDALDENDSVKTDDFARWGNSGAVHPNLRNSMYYI ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMAVKVARPCRKIEKWTYLELKGSKANEGVPQAMTAFAEFLNRTGIPINPRFSPGMSMSVPGSEKEFFAKVKELMSSHQ FVVVLLPRKDVAIYNMVKRAADITFGVHTVCCVAEKFLSTKGQLGYFANVGLKVNLKFGGTNHNIKTPIPLLAKGKTMVV GYDVTHPTNLAAGQSPASAPSIVGLVSTIDQHLGQWPAMVWNNPHGQESMTEQFTDKFKTRLELWRSNPANNRSLPENIL IFRDGVSEGQFQMVIKDELPLVRAACKLVYPAGKLPRITLIVSVKGSGSAHYTVLVDEIFRADYGNKAADTLEQLTHDMC YLFGRATKAVSICPPAYYADLVCDRARIHQKELFDALDENDSVKTDDFARWGNSGAVHPNLRNSMYYI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ALA n 1 5 VAL n 1 6 LYS n 1 7 VAL n 1 8 ALA n 1 9 ARG n 1 10 PRO n 1 11 CYS n 1 12 ARG n 1 13 LYS n 1 14 ILE n 1 15 GLU n 1 16 LYS n 1 17 TRP n 1 18 THR n 1 19 TYR n 1 20 LEU n 1 21 GLU n 1 22 LEU n 1 23 LYS n 1 24 GLY n 1 25 SER n 1 26 LYS n 1 27 ALA n 1 28 ASN n 1 29 GLU n 1 30 GLY n 1 31 VAL n 1 32 PRO n 1 33 GLN n 1 34 ALA n 1 35 MET n 1 36 THR n 1 37 ALA n 1 38 PHE n 1 39 ALA n 1 40 GLU n 1 41 PHE n 1 42 LEU n 1 43 ASN n 1 44 ARG n 1 45 THR n 1 46 GLY n 1 47 ILE n 1 48 PRO n 1 49 ILE n 1 50 ASN n 1 51 PRO n 1 52 ARG n 1 53 PHE n 1 54 SER n 1 55 PRO n 1 56 GLY n 1 57 MET n 1 58 SER n 1 59 MET n 1 60 SER n 1 61 VAL n 1 62 PRO n 1 63 GLY n 1 64 SER n 1 65 GLU n 1 66 LYS n 1 67 GLU n 1 68 PHE n 1 69 PHE n 1 70 ALA n 1 71 LYS n 1 72 VAL n 1 73 LYS n 1 74 GLU n 1 75 LEU n 1 76 MET n 1 77 SER n 1 78 SER n 1 79 HIS n 1 80 GLN n 1 81 PHE n 1 82 VAL n 1 83 VAL n 1 84 VAL n 1 85 LEU n 1 86 LEU n 1 87 PRO n 1 88 ARG n 1 89 LYS n 1 90 ASP n 1 91 VAL n 1 92 ALA n 1 93 ILE n 1 94 TYR n 1 95 ASN n 1 96 MET n 1 97 VAL n 1 98 LYS n 1 99 ARG n 1 100 ALA n 1 101 ALA n 1 102 ASP n 1 103 ILE n 1 104 THR n 1 105 PHE n 1 106 GLY n 1 107 VAL n 1 108 HIS n 1 109 THR n 1 110 VAL n 1 111 CYS n 1 112 CYS n 1 113 VAL n 1 114 ALA n 1 115 GLU n 1 116 LYS n 1 117 PHE n 1 118 LEU n 1 119 SER n 1 120 THR n 1 121 LYS n 1 122 GLY n 1 123 GLN n 1 124 LEU n 1 125 GLY n 1 126 TYR n 1 127 PHE n 1 128 ALA n 1 129 ASN n 1 130 VAL n 1 131 GLY n 1 132 LEU n 1 133 LYS n 1 134 VAL n 1 135 ASN n 1 136 LEU n 1 137 LYS n 1 138 PHE n 1 139 GLY n 1 140 GLY n 1 141 THR n 1 142 ASN n 1 143 HIS n 1 144 ASN n 1 145 ILE n 1 146 LYS n 1 147 THR n 1 148 PRO n 1 149 ILE n 1 150 PRO n 1 151 LEU n 1 152 LEU n 1 153 ALA n 1 154 LYS n 1 155 GLY n 1 156 LYS n 1 157 THR n 1 158 MET n 1 159 VAL n 1 160 VAL n 1 161 GLY n 1 162 TYR n 1 163 ASP n 1 164 VAL n 1 165 THR n 1 166 HIS n 1 167 PRO n 1 168 THR n 1 169 ASN n 1 170 LEU n 1 171 ALA n 1 172 ALA n 1 173 GLY n 1 174 GLN n 1 175 SER n 1 176 PRO n 1 177 ALA n 1 178 SER n 1 179 ALA n 1 180 PRO n 1 181 SER n 1 182 ILE n 1 183 VAL n 1 184 GLY n 1 185 LEU n 1 186 VAL n 1 187 SER n 1 188 THR n 1 189 ILE n 1 190 ASP n 1 191 GLN n 1 192 HIS n 1 193 LEU n 1 194 GLY n 1 195 GLN n 1 196 TRP n 1 197 PRO n 1 198 ALA n 1 199 MET n 1 200 VAL n 1 201 TRP n 1 202 ASN n 1 203 ASN n 1 204 PRO n 1 205 HIS n 1 206 GLY n 1 207 GLN n 1 208 GLU n 1 209 SER n 1 210 MET n 1 211 THR n 1 212 GLU n 1 213 GLN n 1 214 PHE n 1 215 THR n 1 216 ASP n 1 217 LYS n 1 218 PHE n 1 219 LYS n 1 220 THR n 1 221 ARG n 1 222 LEU n 1 223 GLU n 1 224 LEU n 1 225 TRP n 1 226 ARG n 1 227 SER n 1 228 ASN n 1 229 PRO n 1 230 ALA n 1 231 ASN n 1 232 ASN n 1 233 ARG n 1 234 SER n 1 235 LEU n 1 236 PRO n 1 237 GLU n 1 238 ASN n 1 239 ILE n 1 240 LEU n 1 241 ILE n 1 242 PHE n 1 243 ARG n 1 244 ASP n 1 245 GLY n 1 246 VAL n 1 247 SER n 1 248 GLU n 1 249 GLY n 1 250 GLN n 1 251 PHE n 1 252 GLN n 1 253 MET n 1 254 VAL n 1 255 ILE n 1 256 LYS n 1 257 ASP n 1 258 GLU n 1 259 LEU n 1 260 PRO n 1 261 LEU n 1 262 VAL n 1 263 ARG n 1 264 ALA n 1 265 ALA n 1 266 CYS n 1 267 LYS n 1 268 LEU n 1 269 VAL n 1 270 TYR n 1 271 PRO n 1 272 ALA n 1 273 GLY n 1 274 LYS n 1 275 LEU n 1 276 PRO n 1 277 ARG n 1 278 ILE n 1 279 THR n 1 280 LEU n 1 281 ILE n 1 282 VAL n 1 283 SER n 1 284 VAL n 1 285 LYS n 1 286 GLY n 1 287 SER n 1 288 GLY n 1 289 SER n 1 290 ALA n 1 291 HIS n 1 292 TYR n 1 293 THR n 1 294 VAL n 1 295 LEU n 1 296 VAL n 1 297 ASP n 1 298 GLU n 1 299 ILE n 1 300 PHE n 1 301 ARG n 1 302 ALA n 1 303 ASP n 1 304 TYR n 1 305 GLY n 1 306 ASN n 1 307 LYS n 1 308 ALA n 1 309 ALA n 1 310 ASP n 1 311 THR n 1 312 LEU n 1 313 GLU n 1 314 GLN n 1 315 LEU n 1 316 THR n 1 317 HIS n 1 318 ASP n 1 319 MET n 1 320 CYS n 1 321 TYR n 1 322 LEU n 1 323 PHE n 1 324 GLY n 1 325 ARG n 1 326 ALA n 1 327 THR n 1 328 LYS n 1 329 ALA n 1 330 VAL n 1 331 SER n 1 332 ILE n 1 333 CYS n 1 334 PRO n 1 335 PRO n 1 336 ALA n 1 337 TYR n 1 338 TYR n 1 339 ALA n 1 340 ASP n 1 341 LEU n 1 342 VAL n 1 343 CYS n 1 344 ASP n 1 345 ARG n 1 346 ALA n 1 347 ARG n 1 348 ILE n 1 349 HIS n 1 350 GLN n 1 351 LYS n 1 352 GLU n 1 353 LEU n 1 354 PHE n 1 355 ASP n 1 356 ALA n 1 357 LEU n 1 358 ASP n 1 359 GLU n 1 360 ASN n 1 361 ASP n 1 362 SER n 1 363 VAL n 1 364 LYS n 1 365 THR n 1 366 ASP n 1 367 ASP n 1 368 PHE n 1 369 ALA n 1 370 ARG n 1 371 TRP n 1 372 GLY n 1 373 ASN n 1 374 SER n 1 375 GLY n 1 376 ALA n 1 377 VAL n 1 378 HIS n 1 379 PRO n 1 380 ASN n 1 381 LEU n 1 382 ARG n 1 383 ASN n 1 384 SER n 1 385 MET n 1 386 TYR n 1 387 TYR n 1 388 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'NEUROSPORA CRASSA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5141 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 83333 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain K-12 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETM60 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP Q9P8T1_NEUCR 1 ? ? Q9P8T1 ? 2 PDB 2YHA 1 ? ? 2YHA ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2YHA A 5 ? 285 ? Q9P8T1 506 ? 786 ? 506 786 2 2 2YHA A 286 ? 288 ? 2YHA 787 ? 838 ? 787 838 3 1 2YHA A 289 ? 388 ? Q9P8T1 839 ? 938 ? 839 938 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YHA GLY A 1 ? UNP Q9P8T1 ? ? 'expression tag' 502 1 1 2YHA ALA A 2 ? UNP Q9P8T1 ? ? 'expression tag' 503 2 1 2YHA MET A 3 ? UNP Q9P8T1 ? ? 'expression tag' 504 3 1 2YHA ALA A 4 ? UNP Q9P8T1 ? ? 'expression tag' 505 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YHA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_percent_sol 48.5 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '200 MM DI-SODIUM TARTRATE, 2.3 M AMMONIUM SULFATE., pH 7.2' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2010-11-19 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 1.0000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YHA _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 54.60 _reflns.d_resolution_high 1.85 _reflns.number_obs 34431 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.06 _reflns.pdbx_netI_over_sigmaI 15.30 _reflns.B_iso_Wilson_estimate 28.85 _reflns.pdbx_redundancy 5.07 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.94 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.66 _reflns_shell.meanI_over_sigI_obs 2.39 _reflns_shell.pdbx_redundancy 5.07 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YHA _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 34415 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 54.629 _refine.ls_d_res_high 1.850 _refine.ls_percent_reflns_obs 99.77 _refine.ls_R_factor_obs 0.1972 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1959 _refine.ls_R_factor_R_free 0.2363 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.2 _refine.ls_number_reflns_R_free 1087 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 36.76 _refine.aniso_B[1][1] 5.2990 _refine.aniso_B[2][2] 5.2990 _refine.aniso_B[3][3] -10.5981 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.422 _refine.solvent_model_param_bsol 39.199 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ;THE FOLLOWING RESIDUES ARE DISORDERED, K786 TO A840, F873 TO I882. SIDE-CHAINS OF THE FOLLOWING RESIDUES WERE TRUNCATED AT CB ATOMS: H841, Y842, K857, D860, T861, L862, E863, Q864, T866, H867, Y871, L872. HYDROGENS WERE REFINED IN THE RIDING POSITIONS. ; _refine.pdbx_starting_model 'PDB ENTRY 2YHB' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.23 _refine.pdbx_overall_phase_error 23.84 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2841 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 213 _refine_hist.number_atoms_total 3065 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 54.629 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.015 ? ? 2914 'X-RAY DIFFRACTION' ? f_angle_d 1.453 ? ? 3952 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.353 ? ? 1067 'X-RAY DIFFRACTION' ? f_chiral_restr 0.093 ? ? 442 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 510 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.8500 1.9342 4093 0.2570 100.00 0.3220 . . 114 . . 'X-RAY DIFFRACTION' . 1.9342 2.0362 4136 0.2275 100.00 0.2727 . . 139 . . 'X-RAY DIFFRACTION' . 2.0362 2.1638 4091 0.2049 100.00 0.2607 . . 128 . . 'X-RAY DIFFRACTION' . 2.1638 2.3309 4125 0.1931 100.00 0.2584 . . 152 . . 'X-RAY DIFFRACTION' . 2.3309 2.5654 4114 0.1882 100.00 0.2587 . . 130 . . 'X-RAY DIFFRACTION' . 2.5654 2.9367 4161 0.1910 100.00 0.2218 . . 146 . . 'X-RAY DIFFRACTION' . 2.9367 3.6998 4222 0.1823 100.00 0.2345 . . 132 . . 'X-RAY DIFFRACTION' . 3.6998 54.6527 4386 0.1966 99.00 0.2157 . . 146 . . # _struct.entry_id 2YHA _struct.title 'Crystal Structure of the N. crassa QDE-2 AGO MID-PIWI Domains' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YHA _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text 'RNA BINDING PROTEIN, ARGONAUTE, MIRNA, SIRNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 31 ? ARG A 44 ? VAL A 532 ARG A 545 1 ? 14 HELX_P HELX_P2 2 GLU A 65 ? SER A 77 ? GLU A 566 SER A 578 1 ? 13 HELX_P HELX_P3 3 VAL A 91 ? ASP A 102 ? VAL A 592 ASP A 603 1 ? 12 HELX_P HELX_P4 4 ALA A 114 ? LEU A 118 ? ALA A 615 LEU A 619 1 ? 5 HELX_P HELX_P5 5 GLN A 123 ? LYS A 137 ? GLN A 624 LYS A 638 1 ? 15 HELX_P HELX_P6 6 PRO A 150 ? ALA A 153 ? PRO A 651 ALA A 654 1 ? 4 HELX_P HELX_P7 7 GLN A 207 ? SER A 227 ? GLN A 708 SER A 728 1 ? 21 HELX_P HELX_P8 8 PHE A 251 ? ASP A 257 ? PHE A 752 ASP A 758 1 ? 7 HELX_P HELX_P9 9 LEU A 259 ? VAL A 269 ? LEU A 760 VAL A 770 1 ? 11 HELX_P HELX_P10 10 PHE A 300 ? TYR A 304 ? PHE A 850 TYR A 854 1 ? 5 HELX_P HELX_P11 11 ALA A 308 ? TYR A 321 ? ALA A 858 TYR A 871 1 ? 14 HELX_P HELX_P12 12 PRO A 334 ? HIS A 349 ? PRO A 884 HIS A 899 1 ? 16 HELX_P HELX_P13 13 LYS A 351 ? LEU A 357 ? LYS A 901 LEU A 907 1 ? 7 HELX_P HELX_P14 14 THR A 365 ? SER A 374 ? THR A 915 SER A 924 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? parallel AB 4 5 ? parallel AB 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 MET A 57 ? SER A 60 ? MET A 558 SER A 561 AA 2 TRP A 17 ? LYS A 23 ? TRP A 518 LYS A 524 AA 3 PHE A 81 ? LEU A 86 ? PHE A 582 LEU A 587 AA 4 HIS A 108 ? VAL A 113 ? HIS A 609 VAL A 614 AB 1 ALA A 198 ? ASN A 203 ? ALA A 699 ASN A 704 AB 2 SER A 181 ? SER A 187 ? SER A 682 SER A 688 AB 3 THR A 157 ? THR A 165 ? THR A 658 THR A 666 AB 4 ASN A 238 ? ASP A 244 ? ASN A 739 ASP A 745 AB 5 ARG A 277 ? SER A 283 ? ARG A 778 SER A 784 AB 6 TYR A 292 ? ASP A 297 ? TYR A 842 ASP A 847 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N MET A 57 ? N MET A 558 O TYR A 19 ? O TYR A 520 AA 2 3 N THR A 18 ? N THR A 519 O PHE A 81 ? O PHE A 582 AA 3 4 N VAL A 82 ? N VAL A 583 O HIS A 108 ? O HIS A 609 AB 1 2 N ASN A 203 ? N ASN A 704 O SER A 181 ? O SER A 682 AB 2 3 N VAL A 186 ? N VAL A 687 O GLY A 161 ? O GLY A 662 AB 3 4 N MET A 158 ? N MET A 659 O ASN A 238 ? O ASN A 739 AB 4 5 N ILE A 239 ? N ILE A 740 O ARG A 277 ? O ARG A 778 AB 5 6 N VAL A 282 ? N VAL A 783 O THR A 293 ? O THR A 843 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 1939 ? 8 'BINDING SITE FOR RESIDUE SO4 A 1939' AC2 Software A GOL 1940 ? 3 'BINDING SITE FOR RESIDUE GOL A 1940' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 TYR A 94 ? TYR A 595 . ? 1_555 ? 2 AC1 8 LYS A 98 ? LYS A 599 . ? 1_555 ? 3 AC1 8 THR A 109 ? THR A 610 . ? 1_555 ? 4 AC1 8 VAL A 110 ? VAL A 611 . ? 1_555 ? 5 AC1 8 CYS A 111 ? CYS A 612 . ? 1_555 ? 6 AC1 8 LYS A 137 ? LYS A 638 . ? 1_555 ? 7 AC1 8 HOH D . ? HOH A 2042 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 2050 . ? 1_555 ? 9 AC2 3 LYS A 23 ? LYS A 524 . ? 1_555 ? 10 AC2 3 SER A 60 ? SER A 561 . ? 1_555 ? 11 AC2 3 HOH D . ? HOH A 2213 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YHA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YHA _atom_sites.fract_transf_matrix[1][1] 0.015853 _atom_sites.fract_transf_matrix[1][2] 0.009153 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018305 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005866 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 502 ? ? ? A . n A 1 2 ALA 2 503 ? ? ? A . n A 1 3 MET 3 504 ? ? ? A . n A 1 4 ALA 4 505 ? ? ? A . n A 1 5 VAL 5 506 506 VAL VAL A . n A 1 6 LYS 6 507 507 LYS LYS A . n A 1 7 VAL 7 508 508 VAL VAL A . n A 1 8 ALA 8 509 509 ALA ALA A . n A 1 9 ARG 9 510 510 ARG ARG A . n A 1 10 PRO 10 511 511 PRO PRO A . n A 1 11 CYS 11 512 512 CYS CYS A . n A 1 12 ARG 12 513 513 ARG ARG A . n A 1 13 LYS 13 514 514 LYS LYS A . n A 1 14 ILE 14 515 515 ILE ILE A . n A 1 15 GLU 15 516 516 GLU GLU A . n A 1 16 LYS 16 517 517 LYS LYS A . n A 1 17 TRP 17 518 518 TRP TRP A . n A 1 18 THR 18 519 519 THR THR A . n A 1 19 TYR 19 520 520 TYR TYR A . n A 1 20 LEU 20 521 521 LEU LEU A . n A 1 21 GLU 21 522 522 GLU GLU A . n A 1 22 LEU 22 523 523 LEU LEU A . n A 1 23 LYS 23 524 524 LYS LYS A . n A 1 24 GLY 24 525 525 GLY GLY A . n A 1 25 SER 25 526 526 SER SER A . n A 1 26 LYS 26 527 527 LYS LYS A . n A 1 27 ALA 27 528 528 ALA ALA A . n A 1 28 ASN 28 529 529 ASN ASN A . n A 1 29 GLU 29 530 530 GLU GLU A . n A 1 30 GLY 30 531 531 GLY GLY A . n A 1 31 VAL 31 532 532 VAL VAL A . n A 1 32 PRO 32 533 533 PRO PRO A . n A 1 33 GLN 33 534 534 GLN GLN A . n A 1 34 ALA 34 535 535 ALA ALA A . n A 1 35 MET 35 536 536 MET MET A . n A 1 36 THR 36 537 537 THR THR A . n A 1 37 ALA 37 538 538 ALA ALA A . n A 1 38 PHE 38 539 539 PHE PHE A . n A 1 39 ALA 39 540 540 ALA ALA A . n A 1 40 GLU 40 541 541 GLU GLU A . n A 1 41 PHE 41 542 542 PHE PHE A . n A 1 42 LEU 42 543 543 LEU LEU A . n A 1 43 ASN 43 544 544 ASN ASN A . n A 1 44 ARG 44 545 545 ARG ARG A . n A 1 45 THR 45 546 546 THR THR A . n A 1 46 GLY 46 547 547 GLY GLY A . n A 1 47 ILE 47 548 548 ILE ILE A . n A 1 48 PRO 48 549 549 PRO PRO A . n A 1 49 ILE 49 550 550 ILE ILE A . n A 1 50 ASN 50 551 551 ASN ASN A . n A 1 51 PRO 51 552 552 PRO PRO A . n A 1 52 ARG 52 553 553 ARG ARG A . n A 1 53 PHE 53 554 554 PHE PHE A . n A 1 54 SER 54 555 555 SER SER A . n A 1 55 PRO 55 556 556 PRO PRO A . n A 1 56 GLY 56 557 557 GLY GLY A . n A 1 57 MET 57 558 558 MET MET A . n A 1 58 SER 58 559 559 SER SER A . n A 1 59 MET 59 560 560 MET MET A . n A 1 60 SER 60 561 561 SER SER A . n A 1 61 VAL 61 562 562 VAL VAL A . n A 1 62 PRO 62 563 563 PRO PRO A . n A 1 63 GLY 63 564 564 GLY GLY A . n A 1 64 SER 64 565 565 SER SER A . n A 1 65 GLU 65 566 566 GLU GLU A . n A 1 66 LYS 66 567 567 LYS LYS A . n A 1 67 GLU 67 568 568 GLU GLU A . n A 1 68 PHE 68 569 569 PHE PHE A . n A 1 69 PHE 69 570 570 PHE PHE A . n A 1 70 ALA 70 571 571 ALA ALA A . n A 1 71 LYS 71 572 572 LYS LYS A . n A 1 72 VAL 72 573 573 VAL VAL A . n A 1 73 LYS 73 574 574 LYS LYS A . n A 1 74 GLU 74 575 575 GLU GLU A . n A 1 75 LEU 75 576 576 LEU LEU A . n A 1 76 MET 76 577 577 MET MET A . n A 1 77 SER 77 578 578 SER SER A . n A 1 78 SER 78 579 579 SER SER A . n A 1 79 HIS 79 580 580 HIS HIS A . n A 1 80 GLN 80 581 581 GLN GLN A . n A 1 81 PHE 81 582 582 PHE PHE A . n A 1 82 VAL 82 583 583 VAL VAL A . n A 1 83 VAL 83 584 584 VAL VAL A . n A 1 84 VAL 84 585 585 VAL VAL A . n A 1 85 LEU 85 586 586 LEU LEU A . n A 1 86 LEU 86 587 587 LEU LEU A . n A 1 87 PRO 87 588 588 PRO PRO A . n A 1 88 ARG 88 589 589 ARG ARG A . n A 1 89 LYS 89 590 590 LYS LYS A . n A 1 90 ASP 90 591 591 ASP ASP A . n A 1 91 VAL 91 592 592 VAL VAL A . n A 1 92 ALA 92 593 593 ALA ALA A . n A 1 93 ILE 93 594 594 ILE ILE A . n A 1 94 TYR 94 595 595 TYR TYR A . n A 1 95 ASN 95 596 596 ASN ASN A . n A 1 96 MET 96 597 597 MET MET A . n A 1 97 VAL 97 598 598 VAL VAL A . n A 1 98 LYS 98 599 599 LYS LYS A . n A 1 99 ARG 99 600 600 ARG ARG A . n A 1 100 ALA 100 601 601 ALA ALA A . n A 1 101 ALA 101 602 602 ALA ALA A . n A 1 102 ASP 102 603 603 ASP ASP A . n A 1 103 ILE 103 604 604 ILE ILE A . n A 1 104 THR 104 605 605 THR THR A . n A 1 105 PHE 105 606 606 PHE PHE A . n A 1 106 GLY 106 607 607 GLY GLY A . n A 1 107 VAL 107 608 608 VAL VAL A . n A 1 108 HIS 108 609 609 HIS HIS A . n A 1 109 THR 109 610 610 THR THR A . n A 1 110 VAL 110 611 611 VAL VAL A . n A 1 111 CYS 111 612 612 CYS CYS A . n A 1 112 CYS 112 613 613 CYS CYS A . n A 1 113 VAL 113 614 614 VAL VAL A . n A 1 114 ALA 114 615 615 ALA ALA A . n A 1 115 GLU 115 616 616 GLU GLU A . n A 1 116 LYS 116 617 617 LYS LYS A . n A 1 117 PHE 117 618 618 PHE PHE A . n A 1 118 LEU 118 619 619 LEU LEU A . n A 1 119 SER 119 620 620 SER SER A . n A 1 120 THR 120 621 621 THR THR A . n A 1 121 LYS 121 622 622 LYS LYS A . n A 1 122 GLY 122 623 623 GLY GLY A . n A 1 123 GLN 123 624 624 GLN GLN A . n A 1 124 LEU 124 625 625 LEU LEU A . n A 1 125 GLY 125 626 626 GLY GLY A . n A 1 126 TYR 126 627 627 TYR TYR A . n A 1 127 PHE 127 628 628 PHE PHE A . n A 1 128 ALA 128 629 629 ALA ALA A . n A 1 129 ASN 129 630 630 ASN ASN A . n A 1 130 VAL 130 631 631 VAL VAL A . n A 1 131 GLY 131 632 632 GLY GLY A . n A 1 132 LEU 132 633 633 LEU LEU A . n A 1 133 LYS 133 634 634 LYS LYS A . n A 1 134 VAL 134 635 635 VAL VAL A . n A 1 135 ASN 135 636 636 ASN ASN A . n A 1 136 LEU 136 637 637 LEU LEU A . n A 1 137 LYS 137 638 638 LYS LYS A . n A 1 138 PHE 138 639 639 PHE PHE A . n A 1 139 GLY 139 640 640 GLY GLY A . n A 1 140 GLY 140 641 641 GLY GLY A . n A 1 141 THR 141 642 642 THR THR A . n A 1 142 ASN 142 643 643 ASN ASN A . n A 1 143 HIS 143 644 644 HIS HIS A . n A 1 144 ASN 144 645 645 ASN ASN A . n A 1 145 ILE 145 646 646 ILE ILE A . n A 1 146 LYS 146 647 647 LYS LYS A . n A 1 147 THR 147 648 648 THR THR A . n A 1 148 PRO 148 649 649 PRO PRO A . n A 1 149 ILE 149 650 650 ILE ILE A . n A 1 150 PRO 150 651 651 PRO PRO A . n A 1 151 LEU 151 652 652 LEU LEU A . n A 1 152 LEU 152 653 653 LEU LEU A . n A 1 153 ALA 153 654 654 ALA ALA A . n A 1 154 LYS 154 655 655 LYS LYS A . n A 1 155 GLY 155 656 656 GLY GLY A . n A 1 156 LYS 156 657 657 LYS LYS A . n A 1 157 THR 157 658 658 THR THR A . n A 1 158 MET 158 659 659 MET MET A . n A 1 159 VAL 159 660 660 VAL VAL A . n A 1 160 VAL 160 661 661 VAL VAL A . n A 1 161 GLY 161 662 662 GLY GLY A . n A 1 162 TYR 162 663 663 TYR TYR A . n A 1 163 ASP 163 664 664 ASP ASP A . n A 1 164 VAL 164 665 665 VAL VAL A . n A 1 165 THR 165 666 666 THR THR A . n A 1 166 HIS 166 667 667 HIS HIS A . n A 1 167 PRO 167 668 668 PRO PRO A . n A 1 168 THR 168 669 669 THR THR A . n A 1 169 ASN 169 670 670 ASN ASN A . n A 1 170 LEU 170 671 671 LEU LEU A . n A 1 171 ALA 171 672 672 ALA ALA A . n A 1 172 ALA 172 673 673 ALA ALA A . n A 1 173 GLY 173 674 674 GLY GLY A . n A 1 174 GLN 174 675 675 GLN GLN A . n A 1 175 SER 175 676 676 SER SER A . n A 1 176 PRO 176 677 677 PRO PRO A . n A 1 177 ALA 177 678 678 ALA ALA A . n A 1 178 SER 178 679 679 SER SER A . n A 1 179 ALA 179 680 680 ALA ALA A . n A 1 180 PRO 180 681 681 PRO PRO A . n A 1 181 SER 181 682 682 SER SER A . n A 1 182 ILE 182 683 683 ILE ILE A . n A 1 183 VAL 183 684 684 VAL VAL A . n A 1 184 GLY 184 685 685 GLY GLY A . n A 1 185 LEU 185 686 686 LEU LEU A . n A 1 186 VAL 186 687 687 VAL VAL A . n A 1 187 SER 187 688 688 SER SER A . n A 1 188 THR 188 689 689 THR THR A . n A 1 189 ILE 189 690 690 ILE ILE A . n A 1 190 ASP 190 691 691 ASP ASP A . n A 1 191 GLN 191 692 692 GLN GLN A . n A 1 192 HIS 192 693 693 HIS HIS A . n A 1 193 LEU 193 694 694 LEU LEU A . n A 1 194 GLY 194 695 695 GLY GLY A . n A 1 195 GLN 195 696 696 GLN GLN A . n A 1 196 TRP 196 697 697 TRP TRP A . n A 1 197 PRO 197 698 698 PRO PRO A . n A 1 198 ALA 198 699 699 ALA ALA A . n A 1 199 MET 199 700 700 MET MET A . n A 1 200 VAL 200 701 701 VAL VAL A . n A 1 201 TRP 201 702 702 TRP TRP A . n A 1 202 ASN 202 703 703 ASN ASN A . n A 1 203 ASN 203 704 704 ASN ASN A . n A 1 204 PRO 204 705 705 PRO PRO A . n A 1 205 HIS 205 706 706 HIS HIS A . n A 1 206 GLY 206 707 707 GLY GLY A . n A 1 207 GLN 207 708 708 GLN GLN A . n A 1 208 GLU 208 709 709 GLU GLU A . n A 1 209 SER 209 710 710 SER SER A . n A 1 210 MET 210 711 711 MET MET A . n A 1 211 THR 211 712 712 THR THR A . n A 1 212 GLU 212 713 713 GLU GLU A . n A 1 213 GLN 213 714 714 GLN GLN A . n A 1 214 PHE 214 715 715 PHE PHE A . n A 1 215 THR 215 716 716 THR THR A . n A 1 216 ASP 216 717 717 ASP ASP A . n A 1 217 LYS 217 718 718 LYS LYS A . n A 1 218 PHE 218 719 719 PHE PHE A . n A 1 219 LYS 219 720 720 LYS LYS A . n A 1 220 THR 220 721 721 THR THR A . n A 1 221 ARG 221 722 722 ARG ARG A . n A 1 222 LEU 222 723 723 LEU LEU A . n A 1 223 GLU 223 724 724 GLU GLU A . n A 1 224 LEU 224 725 725 LEU LEU A . n A 1 225 TRP 225 726 726 TRP TRP A . n A 1 226 ARG 226 727 727 ARG ARG A . n A 1 227 SER 227 728 728 SER SER A . n A 1 228 ASN 228 729 729 ASN ASN A . n A 1 229 PRO 229 730 730 PRO PRO A . n A 1 230 ALA 230 731 731 ALA ALA A . n A 1 231 ASN 231 732 732 ASN ASN A . n A 1 232 ASN 232 733 733 ASN ASN A . n A 1 233 ARG 233 734 734 ARG ARG A . n A 1 234 SER 234 735 735 SER SER A . n A 1 235 LEU 235 736 736 LEU LEU A . n A 1 236 PRO 236 737 737 PRO PRO A . n A 1 237 GLU 237 738 738 GLU GLU A . n A 1 238 ASN 238 739 739 ASN ASN A . n A 1 239 ILE 239 740 740 ILE ILE A . n A 1 240 LEU 240 741 741 LEU LEU A . n A 1 241 ILE 241 742 742 ILE ILE A . n A 1 242 PHE 242 743 743 PHE PHE A . n A 1 243 ARG 243 744 744 ARG ARG A . n A 1 244 ASP 244 745 745 ASP ASP A . n A 1 245 GLY 245 746 746 GLY GLY A . n A 1 246 VAL 246 747 747 VAL VAL A . n A 1 247 SER 247 748 748 SER SER A . n A 1 248 GLU 248 749 749 GLU GLU A . n A 1 249 GLY 249 750 750 GLY GLY A . n A 1 250 GLN 250 751 751 GLN GLN A . n A 1 251 PHE 251 752 752 PHE PHE A . n A 1 252 GLN 252 753 753 GLN GLN A . n A 1 253 MET 253 754 754 MET MET A . n A 1 254 VAL 254 755 755 VAL VAL A . n A 1 255 ILE 255 756 756 ILE ILE A . n A 1 256 LYS 256 757 757 LYS LYS A . n A 1 257 ASP 257 758 758 ASP ASP A . n A 1 258 GLU 258 759 759 GLU GLU A . n A 1 259 LEU 259 760 760 LEU LEU A . n A 1 260 PRO 260 761 761 PRO PRO A . n A 1 261 LEU 261 762 762 LEU LEU A . n A 1 262 VAL 262 763 763 VAL VAL A . n A 1 263 ARG 263 764 764 ARG ARG A . n A 1 264 ALA 264 765 765 ALA ALA A . n A 1 265 ALA 265 766 766 ALA ALA A . n A 1 266 CYS 266 767 767 CYS CYS A . n A 1 267 LYS 267 768 768 LYS LYS A . n A 1 268 LEU 268 769 769 LEU LEU A . n A 1 269 VAL 269 770 770 VAL VAL A . n A 1 270 TYR 270 771 771 TYR TYR A . n A 1 271 PRO 271 772 772 PRO PRO A . n A 1 272 ALA 272 773 773 ALA ALA A . n A 1 273 GLY 273 774 774 GLY GLY A . n A 1 274 LYS 274 775 775 LYS LYS A . n A 1 275 LEU 275 776 776 LEU LEU A . n A 1 276 PRO 276 777 777 PRO PRO A . n A 1 277 ARG 277 778 778 ARG ARG A . n A 1 278 ILE 278 779 779 ILE ILE A . n A 1 279 THR 279 780 780 THR THR A . n A 1 280 LEU 280 781 781 LEU LEU A . n A 1 281 ILE 281 782 782 ILE ILE A . n A 1 282 VAL 282 783 783 VAL VAL A . n A 1 283 SER 283 784 784 SER SER A . n A 1 284 VAL 284 785 785 VAL VAL A . n A 1 285 LYS 285 786 ? ? ? A . n A 1 286 GLY 286 787 ? ? ? A . n A 1 287 SER 287 837 ? ? ? A . n A 1 288 GLY 288 838 ? ? ? A . n A 1 289 SER 289 839 ? ? ? A . n A 1 290 ALA 290 840 ? ? ? A . n A 1 291 HIS 291 841 841 HIS HIS A . n A 1 292 TYR 292 842 842 TYR TYR A . n A 1 293 THR 293 843 843 THR THR A . n A 1 294 VAL 294 844 844 VAL VAL A . n A 1 295 LEU 295 845 845 LEU LEU A . n A 1 296 VAL 296 846 846 VAL VAL A . n A 1 297 ASP 297 847 847 ASP ASP A . n A 1 298 GLU 298 848 848 GLU GLU A . n A 1 299 ILE 299 849 849 ILE ILE A . n A 1 300 PHE 300 850 850 PHE PHE A . n A 1 301 ARG 301 851 851 ARG ARG A . n A 1 302 ALA 302 852 852 ALA ALA A . n A 1 303 ASP 303 853 853 ASP ASP A . n A 1 304 TYR 304 854 854 TYR TYR A . n A 1 305 GLY 305 855 855 GLY GLY A . n A 1 306 ASN 306 856 856 ASN ASN A . n A 1 307 LYS 307 857 857 LYS LYS A . n A 1 308 ALA 308 858 858 ALA ALA A . n A 1 309 ALA 309 859 859 ALA ALA A . n A 1 310 ASP 310 860 860 ASP ASP A . n A 1 311 THR 311 861 861 THR THR A . n A 1 312 LEU 312 862 862 LEU LEU A . n A 1 313 GLU 313 863 863 GLU GLU A . n A 1 314 GLN 314 864 864 GLN GLN A . n A 1 315 LEU 315 865 865 LEU LEU A . n A 1 316 THR 316 866 866 THR THR A . n A 1 317 HIS 317 867 867 HIS HIS A . n A 1 318 ASP 318 868 868 ASP ASP A . n A 1 319 MET 319 869 869 MET MET A . n A 1 320 CYS 320 870 870 CYS CYS A . n A 1 321 TYR 321 871 871 TYR TYR A . n A 1 322 LEU 322 872 872 LEU LEU A . n A 1 323 PHE 323 873 ? ? ? A . n A 1 324 GLY 324 874 ? ? ? A . n A 1 325 ARG 325 875 ? ? ? A . n A 1 326 ALA 326 876 ? ? ? A . n A 1 327 THR 327 877 ? ? ? A . n A 1 328 LYS 328 878 ? ? ? A . n A 1 329 ALA 329 879 ? ? ? A . n A 1 330 VAL 330 880 ? ? ? A . n A 1 331 SER 331 881 ? ? ? A . n A 1 332 ILE 332 882 ? ? ? A . n A 1 333 CYS 333 883 883 CYS CYS A . n A 1 334 PRO 334 884 884 PRO PRO A . n A 1 335 PRO 335 885 885 PRO PRO A . n A 1 336 ALA 336 886 886 ALA ALA A . n A 1 337 TYR 337 887 887 TYR TYR A . n A 1 338 TYR 338 888 888 TYR TYR A . n A 1 339 ALA 339 889 889 ALA ALA A . n A 1 340 ASP 340 890 890 ASP ASP A . n A 1 341 LEU 341 891 891 LEU LEU A . n A 1 342 VAL 342 892 892 VAL VAL A . n A 1 343 CYS 343 893 893 CYS CYS A . n A 1 344 ASP 344 894 894 ASP ASP A . n A 1 345 ARG 345 895 895 ARG ARG A . n A 1 346 ALA 346 896 896 ALA ALA A . n A 1 347 ARG 347 897 897 ARG ARG A . n A 1 348 ILE 348 898 898 ILE ILE A . n A 1 349 HIS 349 899 899 HIS HIS A . n A 1 350 GLN 350 900 900 GLN GLN A . n A 1 351 LYS 351 901 901 LYS LYS A . n A 1 352 GLU 352 902 902 GLU GLU A . n A 1 353 LEU 353 903 903 LEU LEU A . n A 1 354 PHE 354 904 904 PHE PHE A . n A 1 355 ASP 355 905 905 ASP ASP A . n A 1 356 ALA 356 906 906 ALA ALA A . n A 1 357 LEU 357 907 907 LEU LEU A . n A 1 358 ASP 358 908 908 ASP ASP A . n A 1 359 GLU 359 909 909 GLU GLU A . n A 1 360 ASN 360 910 910 ASN ASN A . n A 1 361 ASP 361 911 911 ASP ASP A . n A 1 362 SER 362 912 912 SER SER A . n A 1 363 VAL 363 913 913 VAL VAL A . n A 1 364 LYS 364 914 914 LYS LYS A . n A 1 365 THR 365 915 915 THR THR A . n A 1 366 ASP 366 916 916 ASP ASP A . n A 1 367 ASP 367 917 917 ASP ASP A . n A 1 368 PHE 368 918 918 PHE PHE A . n A 1 369 ALA 369 919 919 ALA ALA A . n A 1 370 ARG 370 920 920 ARG ARG A . n A 1 371 TRP 371 921 921 TRP TRP A . n A 1 372 GLY 372 922 922 GLY GLY A . n A 1 373 ASN 373 923 923 ASN ASN A . n A 1 374 SER 374 924 924 SER SER A . n A 1 375 GLY 375 925 925 GLY GLY A . n A 1 376 ALA 376 926 926 ALA ALA A . n A 1 377 VAL 377 927 927 VAL VAL A . n A 1 378 HIS 378 928 928 HIS HIS A . n A 1 379 PRO 379 929 929 PRO PRO A . n A 1 380 ASN 380 930 930 ASN ASN A . n A 1 381 LEU 381 931 931 LEU LEU A . n A 1 382 ARG 382 932 932 ARG ARG A . n A 1 383 ASN 383 933 933 ASN ASN A . n A 1 384 SER 384 934 934 SER SER A . n A 1 385 MET 385 935 935 MET MET A . n A 1 386 TYR 386 936 936 TYR TYR A . n A 1 387 TYR 387 937 937 TYR TYR A . n A 1 388 ILE 388 938 938 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1939 1939 SO4 SO4 A . C 3 GOL 1 1940 1940 GOL GOL A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . D 4 HOH 113 2113 2113 HOH HOH A . D 4 HOH 114 2114 2114 HOH HOH A . D 4 HOH 115 2115 2115 HOH HOH A . D 4 HOH 116 2116 2116 HOH HOH A . D 4 HOH 117 2117 2117 HOH HOH A . D 4 HOH 118 2118 2118 HOH HOH A . D 4 HOH 119 2119 2119 HOH HOH A . D 4 HOH 120 2120 2120 HOH HOH A . D 4 HOH 121 2121 2121 HOH HOH A . D 4 HOH 122 2122 2122 HOH HOH A . D 4 HOH 123 2123 2123 HOH HOH A . D 4 HOH 124 2124 2124 HOH HOH A . D 4 HOH 125 2125 2125 HOH HOH A . D 4 HOH 126 2126 2126 HOH HOH A . D 4 HOH 127 2127 2127 HOH HOH A . D 4 HOH 128 2128 2128 HOH HOH A . D 4 HOH 129 2129 2129 HOH HOH A . D 4 HOH 130 2130 2130 HOH HOH A . D 4 HOH 131 2131 2131 HOH HOH A . D 4 HOH 132 2132 2132 HOH HOH A . D 4 HOH 133 2133 2133 HOH HOH A . D 4 HOH 134 2134 2134 HOH HOH A . D 4 HOH 135 2135 2135 HOH HOH A . D 4 HOH 136 2136 2136 HOH HOH A . D 4 HOH 137 2137 2137 HOH HOH A . D 4 HOH 138 2138 2138 HOH HOH A . D 4 HOH 139 2139 2139 HOH HOH A . D 4 HOH 140 2140 2140 HOH HOH A . D 4 HOH 141 2141 2141 HOH HOH A . D 4 HOH 142 2142 2142 HOH HOH A . D 4 HOH 143 2143 2143 HOH HOH A . D 4 HOH 144 2144 2144 HOH HOH A . D 4 HOH 145 2145 2145 HOH HOH A . D 4 HOH 146 2146 2146 HOH HOH A . D 4 HOH 147 2147 2147 HOH HOH A . D 4 HOH 148 2148 2148 HOH HOH A . D 4 HOH 149 2149 2149 HOH HOH A . D 4 HOH 150 2150 2150 HOH HOH A . D 4 HOH 151 2151 2151 HOH HOH A . D 4 HOH 152 2152 2152 HOH HOH A . D 4 HOH 153 2153 2153 HOH HOH A . D 4 HOH 154 2154 2154 HOH HOH A . D 4 HOH 155 2155 2155 HOH HOH A . D 4 HOH 156 2156 2156 HOH HOH A . D 4 HOH 157 2157 2157 HOH HOH A . D 4 HOH 158 2158 2158 HOH HOH A . D 4 HOH 159 2159 2159 HOH HOH A . D 4 HOH 160 2160 2160 HOH HOH A . D 4 HOH 161 2161 2161 HOH HOH A . D 4 HOH 162 2162 2162 HOH HOH A . D 4 HOH 163 2163 2163 HOH HOH A . D 4 HOH 164 2164 2164 HOH HOH A . D 4 HOH 165 2165 2165 HOH HOH A . D 4 HOH 166 2166 2166 HOH HOH A . D 4 HOH 167 2167 2167 HOH HOH A . D 4 HOH 168 2168 2168 HOH HOH A . D 4 HOH 169 2169 2169 HOH HOH A . D 4 HOH 170 2170 2170 HOH HOH A . D 4 HOH 171 2171 2171 HOH HOH A . D 4 HOH 172 2172 2172 HOH HOH A . D 4 HOH 173 2173 2173 HOH HOH A . D 4 HOH 174 2174 2174 HOH HOH A . D 4 HOH 175 2175 2175 HOH HOH A . D 4 HOH 176 2176 2176 HOH HOH A . D 4 HOH 177 2177 2177 HOH HOH A . D 4 HOH 178 2178 2178 HOH HOH A . D 4 HOH 179 2179 2179 HOH HOH A . D 4 HOH 180 2180 2180 HOH HOH A . D 4 HOH 181 2181 2181 HOH HOH A . D 4 HOH 182 2182 2182 HOH HOH A . D 4 HOH 183 2183 2183 HOH HOH A . D 4 HOH 184 2184 2184 HOH HOH A . D 4 HOH 185 2185 2185 HOH HOH A . D 4 HOH 186 2186 2186 HOH HOH A . D 4 HOH 187 2187 2187 HOH HOH A . D 4 HOH 188 2188 2188 HOH HOH A . D 4 HOH 189 2189 2189 HOH HOH A . D 4 HOH 190 2190 2190 HOH HOH A . D 4 HOH 191 2191 2191 HOH HOH A . D 4 HOH 192 2192 2192 HOH HOH A . D 4 HOH 193 2193 2193 HOH HOH A . D 4 HOH 194 2194 2194 HOH HOH A . D 4 HOH 195 2195 2195 HOH HOH A . D 4 HOH 196 2196 2196 HOH HOH A . D 4 HOH 197 2197 2197 HOH HOH A . D 4 HOH 198 2198 2198 HOH HOH A . D 4 HOH 199 2199 2199 HOH HOH A . D 4 HOH 200 2200 2200 HOH HOH A . D 4 HOH 201 2201 2201 HOH HOH A . D 4 HOH 202 2202 2202 HOH HOH A . D 4 HOH 203 2203 2203 HOH HOH A . D 4 HOH 204 2204 2204 HOH HOH A . D 4 HOH 205 2205 2205 HOH HOH A . D 4 HOH 206 2206 2206 HOH HOH A . D 4 HOH 207 2207 2207 HOH HOH A . D 4 HOH 208 2208 2208 HOH HOH A . D 4 HOH 209 2209 2209 HOH HOH A . D 4 HOH 210 2210 2210 HOH HOH A . D 4 HOH 211 2211 2211 HOH HOH A . D 4 HOH 212 2212 2212 HOH HOH A . D 4 HOH 213 2213 2213 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-15 2 'Structure model' 1 1 2011-06-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_database_remark.id 650 _pdbx_database_remark.text ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; # _pdbx_entry_details.entry_id 2YHA _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE FIRST 4 AMINO ACIDS (GAMA) ARISE FROM THE CLONING SITE RESIDUES R787 TO R838 OF UNIPROT ENTRY Q9P8T1 WERE REPLACED BY A GSG LINKER (GIVEN RESIDUE NUMBERS 787, 837, AND 838 HERE). ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 2026 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 2161 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_455 _pdbx_validate_symm_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 650 ? ? -38.31 133.05 2 1 ALA A 673 ? ? -152.81 44.10 3 1 GLN A 900 ? ? -94.63 58.97 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 841 ? CG ? A HIS 291 CG 2 1 Y 1 A HIS 841 ? ND1 ? A HIS 291 ND1 3 1 Y 1 A HIS 841 ? CD2 ? A HIS 291 CD2 4 1 Y 1 A HIS 841 ? CE1 ? A HIS 291 CE1 5 1 Y 1 A HIS 841 ? NE2 ? A HIS 291 NE2 6 1 Y 1 A TYR 842 ? CG ? A TYR 292 CG 7 1 Y 1 A TYR 842 ? CD1 ? A TYR 292 CD1 8 1 Y 1 A TYR 842 ? CD2 ? A TYR 292 CD2 9 1 Y 1 A TYR 842 ? CE1 ? A TYR 292 CE1 10 1 Y 1 A TYR 842 ? CE2 ? A TYR 292 CE2 11 1 Y 1 A TYR 842 ? CZ ? A TYR 292 CZ 12 1 Y 1 A TYR 842 ? OH ? A TYR 292 OH 13 1 Y 1 A LYS 857 ? CG ? A LYS 307 CG 14 1 Y 1 A LYS 857 ? CD ? A LYS 307 CD 15 1 Y 1 A LYS 857 ? CE ? A LYS 307 CE 16 1 Y 1 A LYS 857 ? NZ ? A LYS 307 NZ 17 1 Y 1 A ASP 860 ? CG ? A ASP 310 CG 18 1 Y 1 A ASP 860 ? OD1 ? A ASP 310 OD1 19 1 Y 1 A ASP 860 ? OD2 ? A ASP 310 OD2 20 1 Y 1 A THR 861 ? OG1 ? A THR 311 OG1 21 1 Y 1 A THR 861 ? CG2 ? A THR 311 CG2 22 1 Y 1 A LEU 862 ? CG ? A LEU 312 CG 23 1 Y 1 A LEU 862 ? CD1 ? A LEU 312 CD1 24 1 Y 1 A LEU 862 ? CD2 ? A LEU 312 CD2 25 1 Y 1 A GLU 863 ? CG ? A GLU 313 CG 26 1 Y 1 A GLU 863 ? CD ? A GLU 313 CD 27 1 Y 1 A GLU 863 ? OE1 ? A GLU 313 OE1 28 1 Y 1 A GLU 863 ? OE2 ? A GLU 313 OE2 29 1 Y 1 A GLN 864 ? CG ? A GLN 314 CG 30 1 Y 1 A GLN 864 ? CD ? A GLN 314 CD 31 1 Y 1 A GLN 864 ? OE1 ? A GLN 314 OE1 32 1 Y 1 A GLN 864 ? NE2 ? A GLN 314 NE2 33 1 Y 1 A THR 866 ? OG1 ? A THR 316 OG1 34 1 Y 1 A THR 866 ? CG2 ? A THR 316 CG2 35 1 Y 1 A HIS 867 ? CG ? A HIS 317 CG 36 1 Y 1 A HIS 867 ? ND1 ? A HIS 317 ND1 37 1 Y 1 A HIS 867 ? CD2 ? A HIS 317 CD2 38 1 Y 1 A HIS 867 ? CE1 ? A HIS 317 CE1 39 1 Y 1 A HIS 867 ? NE2 ? A HIS 317 NE2 40 1 Y 1 A TYR 871 ? CG ? A TYR 321 CG 41 1 Y 1 A TYR 871 ? CD1 ? A TYR 321 CD1 42 1 Y 1 A TYR 871 ? CD2 ? A TYR 321 CD2 43 1 Y 1 A TYR 871 ? CE1 ? A TYR 321 CE1 44 1 Y 1 A TYR 871 ? CE2 ? A TYR 321 CE2 45 1 Y 1 A TYR 871 ? CZ ? A TYR 321 CZ 46 1 Y 1 A TYR 871 ? OH ? A TYR 321 OH 47 1 Y 1 A LEU 872 ? CG ? A LEU 322 CG 48 1 Y 1 A LEU 872 ? CD1 ? A LEU 322 CD1 49 1 Y 1 A LEU 872 ? CD2 ? A LEU 322 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 502 ? A GLY 1 2 1 Y 1 A ALA 503 ? A ALA 2 3 1 Y 1 A MET 504 ? A MET 3 4 1 Y 1 A ALA 505 ? A ALA 4 5 1 Y 1 A LYS 786 ? A LYS 285 6 1 Y 1 A GLY 787 ? A GLY 286 7 1 Y 1 A SER 837 ? A SER 287 8 1 Y 1 A GLY 838 ? A GLY 288 9 1 Y 1 A SER 839 ? A SER 289 10 1 Y 1 A ALA 840 ? A ALA 290 11 1 Y 1 A PHE 873 ? A PHE 323 12 1 Y 1 A GLY 874 ? A GLY 324 13 1 Y 1 A ARG 875 ? A ARG 325 14 1 Y 1 A ALA 876 ? A ALA 326 15 1 Y 1 A THR 877 ? A THR 327 16 1 Y 1 A LYS 878 ? A LYS 328 17 1 Y 1 A ALA 879 ? A ALA 329 18 1 Y 1 A VAL 880 ? A VAL 330 19 1 Y 1 A SER 881 ? A SER 331 20 1 Y 1 A ILE 882 ? A ILE 332 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 SO4 S S N N 318 SO4 O1 O N N 319 SO4 O2 O N N 320 SO4 O3 O N N 321 SO4 O4 O N N 322 THR N N N N 323 THR CA C N S 324 THR C C N N 325 THR O O N N 326 THR CB C N R 327 THR OG1 O N N 328 THR CG2 C N N 329 THR OXT O N N 330 THR H H N N 331 THR H2 H N N 332 THR HA H N N 333 THR HB H N N 334 THR HG1 H N N 335 THR HG21 H N N 336 THR HG22 H N N 337 THR HG23 H N N 338 THR HXT H N N 339 TRP N N N N 340 TRP CA C N S 341 TRP C C N N 342 TRP O O N N 343 TRP CB C N N 344 TRP CG C Y N 345 TRP CD1 C Y N 346 TRP CD2 C Y N 347 TRP NE1 N Y N 348 TRP CE2 C Y N 349 TRP CE3 C Y N 350 TRP CZ2 C Y N 351 TRP CZ3 C Y N 352 TRP CH2 C Y N 353 TRP OXT O N N 354 TRP H H N N 355 TRP H2 H N N 356 TRP HA H N N 357 TRP HB2 H N N 358 TRP HB3 H N N 359 TRP HD1 H N N 360 TRP HE1 H N N 361 TRP HE3 H N N 362 TRP HZ2 H N N 363 TRP HZ3 H N N 364 TRP HH2 H N N 365 TRP HXT H N N 366 TYR N N N N 367 TYR CA C N S 368 TYR C C N N 369 TYR O O N N 370 TYR CB C N N 371 TYR CG C Y N 372 TYR CD1 C Y N 373 TYR CD2 C Y N 374 TYR CE1 C Y N 375 TYR CE2 C Y N 376 TYR CZ C Y N 377 TYR OH O N N 378 TYR OXT O N N 379 TYR H H N N 380 TYR H2 H N N 381 TYR HA H N N 382 TYR HB2 H N N 383 TYR HB3 H N N 384 TYR HD1 H N N 385 TYR HD2 H N N 386 TYR HE1 H N N 387 TYR HE2 H N N 388 TYR HH H N N 389 TYR HXT H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 SO4 S O1 doub N N 303 SO4 S O2 doub N N 304 SO4 S O3 sing N N 305 SO4 S O4 sing N N 306 THR N CA sing N N 307 THR N H sing N N 308 THR N H2 sing N N 309 THR CA C sing N N 310 THR CA CB sing N N 311 THR CA HA sing N N 312 THR C O doub N N 313 THR C OXT sing N N 314 THR CB OG1 sing N N 315 THR CB CG2 sing N N 316 THR CB HB sing N N 317 THR OG1 HG1 sing N N 318 THR CG2 HG21 sing N N 319 THR CG2 HG22 sing N N 320 THR CG2 HG23 sing N N 321 THR OXT HXT sing N N 322 TRP N CA sing N N 323 TRP N H sing N N 324 TRP N H2 sing N N 325 TRP CA C sing N N 326 TRP CA CB sing N N 327 TRP CA HA sing N N 328 TRP C O doub N N 329 TRP C OXT sing N N 330 TRP CB CG sing N N 331 TRP CB HB2 sing N N 332 TRP CB HB3 sing N N 333 TRP CG CD1 doub Y N 334 TRP CG CD2 sing Y N 335 TRP CD1 NE1 sing Y N 336 TRP CD1 HD1 sing N N 337 TRP CD2 CE2 doub Y N 338 TRP CD2 CE3 sing Y N 339 TRP NE1 CE2 sing Y N 340 TRP NE1 HE1 sing N N 341 TRP CE2 CZ2 sing Y N 342 TRP CE3 CZ3 doub Y N 343 TRP CE3 HE3 sing N N 344 TRP CZ2 CH2 doub Y N 345 TRP CZ2 HZ2 sing N N 346 TRP CZ3 CH2 sing Y N 347 TRP CZ3 HZ3 sing N N 348 TRP CH2 HH2 sing N N 349 TRP OXT HXT sing N N 350 TYR N CA sing N N 351 TYR N H sing N N 352 TYR N H2 sing N N 353 TYR CA C sing N N 354 TYR CA CB sing N N 355 TYR CA HA sing N N 356 TYR C O doub N N 357 TYR C OXT sing N N 358 TYR CB CG sing N N 359 TYR CB HB2 sing N N 360 TYR CB HB3 sing N N 361 TYR CG CD1 doub Y N 362 TYR CG CD2 sing Y N 363 TYR CD1 CE1 sing Y N 364 TYR CD1 HD1 sing N N 365 TYR CD2 CE2 doub Y N 366 TYR CD2 HD2 sing N N 367 TYR CE1 CZ doub Y N 368 TYR CE1 HE1 sing N N 369 TYR CE2 CZ sing Y N 370 TYR CE2 HE2 sing N N 371 TYR CZ OH sing N N 372 TYR OH HH sing N N 373 TYR OXT HXT sing N N 374 VAL N CA sing N N 375 VAL N H sing N N 376 VAL N H2 sing N N 377 VAL CA C sing N N 378 VAL CA CB sing N N 379 VAL CA HA sing N N 380 VAL C O doub N N 381 VAL C OXT sing N N 382 VAL CB CG1 sing N N 383 VAL CB CG2 sing N N 384 VAL CB HB sing N N 385 VAL CG1 HG11 sing N N 386 VAL CG1 HG12 sing N N 387 VAL CG1 HG13 sing N N 388 VAL CG2 HG21 sing N N 389 VAL CG2 HG22 sing N N 390 VAL CG2 HG23 sing N N 391 VAL OXT HXT sing N N 392 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2YHB _pdbx_initial_refinement_model.details 'PDB ENTRY 2YHB' #