HEADER LIGASE 31-MAY-11 2YL2 TITLE CRYSTAL STRUCTURE OF HUMAN ACETYL-COA CARBOXYLASE 1, BIOTIN TITLE 2 CARBOXYLASE (BC) DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-COA CARBOXYLASE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BIOTIN CARBOXYLASE (BC) DOMAIN, RESIDUES 78-617; COMPND 5 SYNONYM: ACC1, ACC-ALPHA, BIOTIN CARBOXYLASE; COMPND 6 EC: 6.4.1.2, 6.3.4.14; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3-PL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PNIC28-BSA4 KEYWDS LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR J.R.C.MUNIZ,D.S.FROESE,E.KRYSZTOFINSKA,M.VOLLMAR,A.BELTRAMI,T.KROJER, AUTHOR 2 F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,C.BOUNTRA,W.W.YUE, AUTHOR 3 U.OPPERMANN REVDAT 3 08-MAY-24 2YL2 1 REMARK REVDAT 2 24-JAN-18 2YL2 1 JRNL REVDAT 1 15-JUN-11 2YL2 0 JRNL AUTH J.R.C.MUNIZ,D.S.FROESE,E.KRYSZTOFINSKA,M.VOLLMAR,A.BELTRAMI, JRNL AUTH 2 T.KROJER,C.K.ALLERSTON,F.VON DELFT,C.H.ARROWSMITH, JRNL AUTH 3 A.M.EDWARDS,J.WEIGELT,C.BOUNTRA,W.W.YUE,U.OPPERMANN JRNL TITL CRYSTAL STRUCTURE OF HUMAN ACETYL-COA CARBOXYLASE 1, BIOTIN JRNL TITL 2 CARBOXYLASE (BC) DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 43227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2185 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.36 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3189 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2310 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3025 REMARK 3 BIN R VALUE (WORKING SET) : 0.2301 REMARK 3 BIN FREE R VALUE : 0.2484 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.14 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 164 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7384 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 213 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.07920 REMARK 3 B22 (A**2) : -2.20980 REMARK 3 B33 (A**2) : 1.13060 REMARK 3 B12 (A**2) : 3.58760 REMARK 3 B13 (A**2) : -2.74750 REMARK 3 B23 (A**2) : -11.24310 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.319 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.916 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7585 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 10322 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2540 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 184 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1118 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7585 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 991 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 8957 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.79 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.68 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YL2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1290048494. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96810 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43240 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 60.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 200 MM NA(MALONATE) PH REMARK 280 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 115 REMARK 465 MET A 116 REMARK 465 SER A 117 REMARK 465 GLY A 118 REMARK 465 LEU A 119 REMARK 465 HIS A 120 REMARK 465 LEU A 121 REMARK 465 VAL A 122 REMARK 465 LYS A 123 REMARK 465 GLN A 124 REMARK 465 GLY A 125 REMARK 465 ARG A 126 REMARK 465 ASP A 127 REMARK 465 ARG A 128 REMARK 465 LYS A 129 REMARK 465 LYS A 130 REMARK 465 ILE A 131 REMARK 465 ASP A 132 REMARK 465 SER A 133 REMARK 465 GLN A 134 REMARK 465 ARG A 135 REMARK 465 ASP A 136 REMARK 465 PHE A 137 REMARK 465 THR A 138 REMARK 465 ASP A 305 REMARK 465 TRP A 306 REMARK 465 GLN A 307 REMARK 465 GLU A 308 REMARK 465 ASN A 309 REMARK 465 ASP A 310 REMARK 465 PHE A 311 REMARK 465 SER A 312 REMARK 465 LYS A 313 REMARK 465 ARG A 314 REMARK 465 SER A 549 REMARK 465 GLU A 550 REMARK 465 ASN A 551 REMARK 465 PRO A 552 REMARK 465 ASP A 553 REMARK 465 GLU A 554 REMARK 465 GLY A 555 REMARK 465 PHE A 556 REMARK 465 LYS A 557 REMARK 465 PRO A 558 REMARK 465 SER A 559 REMARK 465 SER A 560 REMARK 465 ALA A 581 REMARK 465 ALA A 582 REMARK 465 ALA A 583 REMARK 465 GLY A 584 REMARK 465 GLY A 585 REMARK 465 LEU A 586 REMARK 465 HIS A 587 REMARK 465 GLU A 588 REMARK 465 PHE A 589 REMARK 465 ALA A 590 REMARK 465 ASP A 591 REMARK 465 SER A 592 REMARK 465 SER B 115 REMARK 465 MET B 116 REMARK 465 SER B 117 REMARK 465 GLY B 118 REMARK 465 LEU B 119 REMARK 465 HIS B 120 REMARK 465 LEU B 121 REMARK 465 VAL B 122 REMARK 465 LYS B 123 REMARK 465 GLN B 124 REMARK 465 GLY B 125 REMARK 465 ARG B 126 REMARK 465 ASP B 127 REMARK 465 ARG B 128 REMARK 465 LYS B 129 REMARK 465 LYS B 130 REMARK 465 ILE B 131 REMARK 465 ASP B 132 REMARK 465 SER B 133 REMARK 465 GLN B 134 REMARK 465 ARG B 135 REMARK 465 ASP B 136 REMARK 465 PHE B 137 REMARK 465 THR B 138 REMARK 465 GLN B 307 REMARK 465 GLU B 308 REMARK 465 ASN B 309 REMARK 465 ASP B 310 REMARK 465 PHE B 311 REMARK 465 SER B 549 REMARK 465 GLU B 550 REMARK 465 ASN B 551 REMARK 465 PRO B 552 REMARK 465 ASP B 553 REMARK 465 GLU B 554 REMARK 465 GLY B 555 REMARK 465 PHE B 556 REMARK 465 LYS B 557 REMARK 465 PRO B 558 REMARK 465 SER B 559 REMARK 465 SER B 560 REMARK 465 ALA B 581 REMARK 465 ALA B 582 REMARK 465 ALA B 583 REMARK 465 GLY B 584 REMARK 465 GLY B 585 REMARK 465 LEU B 586 REMARK 465 HIS B 587 REMARK 465 GLU B 588 REMARK 465 PHE B 589 REMARK 465 ALA B 590 REMARK 465 ASP B 591 REMARK 465 SER B 592 REMARK 465 ILE B 654 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 GLN A 272 CG CD OE1 NE2 REMARK 470 VAL A 304 CG1 CG2 REMARK 470 GLU A 324 CD OE1 OE2 REMARK 470 LYS A 325 CG CD CE NZ REMARK 470 LYS A 329 CG CD CE NZ REMARK 470 LYS A 348 CE NZ REMARK 470 ARG A 372 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 390 CG CD CE NZ REMARK 470 GLN A 391 CG CD OE1 NE2 REMARK 470 ARG A 420 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 422 CG CD OE1 NE2 REMARK 470 SER A 532 OG REMARK 470 HIS A 534 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 565 CG CD OE1 OE2 REMARK 470 ARG A 569 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 572 CG CD CE NZ REMARK 470 PHE A 578 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 579 OG REMARK 470 GLU A 605 CG CD OE1 OE2 REMARK 470 SER A 609 OG REMARK 470 LYS A 616 CG CD CE NZ REMARK 470 SER A 619 OG REMARK 470 ASP A 623 CG OD1 OD2 REMARK 470 PHE A 624 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR A 627 OG1 CG2 REMARK 470 VAL A 628 CG1 CG2 REMARK 470 GLU A 629 CG CD OE1 OE2 REMARK 470 TYR A 630 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 633 CD CE NZ REMARK 470 LEU A 634 CG CD1 CD2 REMARK 470 ARG A 644 CD NE CZ NH1 NH2 REMARK 470 ILE A 654 CG1 CG2 CD1 REMARK 470 ARG B 176 NE CZ NH1 NH2 REMARK 470 LYS B 254 CG CD CE NZ REMARK 470 GLN B 272 CG CD OE1 NE2 REMARK 470 LEU B 316 CG CD1 CD2 REMARK 470 LYS B 325 CE NZ REMARK 470 LYS B 329 CG CD CE NZ REMARK 470 ASP B 330 CG OD1 OD2 REMARK 470 LYS B 356 NZ REMARK 470 LYS B 360 CD CE NZ REMARK 470 ARG B 372 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 390 CG CD CE NZ REMARK 470 GLU B 530 CG CD OE1 OE2 REMARK 470 GLN B 564 CD OE1 NE2 REMARK 470 GLU B 565 CG CD OE1 OE2 REMARK 470 ARG B 569 CG CD NE CZ NH1 NH2 REMARK 470 SER B 570 OG REMARK 470 PHE B 578 CD1 CD2 CE1 CE2 CZ REMARK 470 SER B 579 OG REMARK 470 GLN B 593 CG CD OE1 NE2 REMARK 470 PHE B 594 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 605 CG CD OE1 OE2 REMARK 470 SER B 609 OG REMARK 470 ARG B 625 NE CZ NH1 NH2 REMARK 470 LYS B 633 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 509 O HOH B 2096 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 162 -177.68 -172.12 REMARK 500 ASN A 220 -18.90 -49.38 REMARK 500 ASN A 223 -105.49 -127.44 REMARK 500 HIS A 248 -122.81 49.47 REMARK 500 LEU A 410 53.03 -116.83 REMARK 500 PHE A 411 -161.36 64.40 REMARK 500 SER A 456 -153.25 81.23 REMARK 500 PRO A 477 42.09 -84.91 REMARK 500 PHE A 624 52.09 -109.71 REMARK 500 ARG A 625 -62.21 -101.90 REMARK 500 ARG A 644 59.45 -115.93 REMARK 500 TRP A 649 -70.51 -45.84 REMARK 500 ASN B 223 -102.42 -122.54 REMARK 500 HIS B 248 -122.87 61.52 REMARK 500 LEU B 410 53.70 -116.46 REMARK 500 PHE B 411 -163.77 61.19 REMARK 500 SER B 456 -155.02 77.45 REMARK 500 PRO B 477 40.27 -84.72 REMARK 500 ARG B 644 58.52 -116.68 REMARK 500 TRP B 649 -70.44 -44.17 REMARK 500 REMARK 500 REMARK: NULL DBREF 2YL2 A 115 654 UNP Q13085 ACACA_HUMAN 78 617 DBREF 2YL2 B 115 654 UNP Q13085 ACACA_HUMAN 78 617 SEQRES 1 A 540 SER MET SER GLY LEU HIS LEU VAL LYS GLN GLY ARG ASP SEQRES 2 A 540 ARG LYS LYS ILE ASP SER GLN ARG ASP PHE THR VAL ALA SEQRES 3 A 540 SER PRO ALA GLU PHE VAL THR ARG PHE GLY GLY ASN LYS SEQRES 4 A 540 VAL ILE GLU LYS VAL LEU ILE ALA ASN ASN GLY ILE ALA SEQRES 5 A 540 ALA VAL LYS CYS MET ARG SER ILE ARG ARG TRP SER TYR SEQRES 6 A 540 GLU MET PHE ARG ASN GLU ARG ALA ILE ARG PHE VAL VAL SEQRES 7 A 540 MET VAL THR PRO GLU ASP LEU LYS ALA ASN ALA GLU TYR SEQRES 8 A 540 ILE LYS MET ALA ASP HIS TYR VAL PRO VAL PRO GLY GLY SEQRES 9 A 540 PRO ASN ASN ASN ASN TYR ALA ASN VAL GLU LEU ILE LEU SEQRES 10 A 540 ASP ILE ALA LYS ARG ILE PRO VAL GLN ALA VAL TRP ALA SEQRES 11 A 540 GLY TRP GLY HIS ALA SER GLU ASN PRO LYS LEU PRO GLU SEQRES 12 A 540 LEU LEU LEU LYS ASN GLY ILE ALA PHE MET GLY PRO PRO SEQRES 13 A 540 SER GLN ALA MET TRP ALA LEU GLY ASP LYS ILE ALA SER SEQRES 14 A 540 SER ILE VAL ALA GLN THR ALA GLY ILE PRO THR LEU PRO SEQRES 15 A 540 TRP SER GLY SER GLY LEU ARG VAL ASP TRP GLN GLU ASN SEQRES 16 A 540 ASP PHE SER LYS ARG ILE LEU ASN VAL PRO GLN GLU LEU SEQRES 17 A 540 TYR GLU LYS GLY TYR VAL LYS ASP VAL ASP ASP GLY LEU SEQRES 18 A 540 GLN ALA ALA GLU GLU VAL GLY TYR PRO VAL MET ILE LYS SEQRES 19 A 540 ALA SER GLU GLY GLY GLY GLY LYS GLY ILE ARG LYS VAL SEQRES 20 A 540 ASN ASN ALA ASP ASP PHE PRO ASN LEU PHE ARG GLN VAL SEQRES 21 A 540 GLN ALA GLU VAL PRO GLY SER PRO ILE PHE VAL MET ARG SEQRES 22 A 540 LEU ALA LYS GLN SER ARG HIS LEU GLU VAL GLN ILE LEU SEQRES 23 A 540 ALA ASP GLN TYR GLY ASN ALA ILE SER LEU PHE GLY ARG SEQRES 24 A 540 ASP CYS SER VAL GLN ARG ARG HIS GLN LYS ILE ILE GLU SEQRES 25 A 540 GLU ALA PRO ALA THR ILE ALA THR PRO ALA VAL PHE GLU SEQRES 26 A 540 HIS MET GLU GLN CYS ALA VAL LYS LEU ALA LYS MET VAL SEQRES 27 A 540 GLY TYR VAL SER ALA GLY THR VAL GLU TYR LEU TYR SER SEQRES 28 A 540 GLN ASP GLY SER PHE TYR PHE LEU GLU LEU ASN PRO ARG SEQRES 29 A 540 LEU GLN VAL GLU HIS PRO CYS THR GLU MET VAL ALA ASP SEQRES 30 A 540 VAL ASN LEU PRO ALA ALA GLN LEU GLN ILE ALA MET GLY SEQRES 31 A 540 ILE PRO LEU TYR ARG ILE LYS ASP ILE ARG MET MET TYR SEQRES 32 A 540 GLY VAL SER PRO TRP GLY ASP SER PRO ILE ASP PHE GLU SEQRES 33 A 540 ASP SER ALA HIS VAL PRO CYS PRO ARG GLY HIS VAL ILE SEQRES 34 A 540 ALA ALA ARG ILE THR SER GLU ASN PRO ASP GLU GLY PHE SEQRES 35 A 540 LYS PRO SER SER GLY THR VAL GLN GLU LEU ASN PHE ARG SEQRES 36 A 540 SER ASN LYS ASN VAL TRP GLY TYR PHE SER VAL ALA ALA SEQRES 37 A 540 ALA GLY GLY LEU HIS GLU PHE ALA ASP SER GLN PHE GLY SEQRES 38 A 540 HIS CYS PHE SER TRP GLY GLU ASN ARG GLU GLU ALA ILE SEQRES 39 A 540 SER ASN MET VAL VAL ALA LEU LYS GLU LEU SER ILE ARG SEQRES 40 A 540 GLY ASP PHE ARG THR THR VAL GLU TYR LEU ILE LYS LEU SEQRES 41 A 540 LEU GLU THR GLU SER PHE GLN MET ASN ARG ILE ASP THR SEQRES 42 A 540 GLY TRP LEU ASP ARG LEU ILE SEQRES 1 B 540 SER MET SER GLY LEU HIS LEU VAL LYS GLN GLY ARG ASP SEQRES 2 B 540 ARG LYS LYS ILE ASP SER GLN ARG ASP PHE THR VAL ALA SEQRES 3 B 540 SER PRO ALA GLU PHE VAL THR ARG PHE GLY GLY ASN LYS SEQRES 4 B 540 VAL ILE GLU LYS VAL LEU ILE ALA ASN ASN GLY ILE ALA SEQRES 5 B 540 ALA VAL LYS CYS MET ARG SER ILE ARG ARG TRP SER TYR SEQRES 6 B 540 GLU MET PHE ARG ASN GLU ARG ALA ILE ARG PHE VAL VAL SEQRES 7 B 540 MET VAL THR PRO GLU ASP LEU LYS ALA ASN ALA GLU TYR SEQRES 8 B 540 ILE LYS MET ALA ASP HIS TYR VAL PRO VAL PRO GLY GLY SEQRES 9 B 540 PRO ASN ASN ASN ASN TYR ALA ASN VAL GLU LEU ILE LEU SEQRES 10 B 540 ASP ILE ALA LYS ARG ILE PRO VAL GLN ALA VAL TRP ALA SEQRES 11 B 540 GLY TRP GLY HIS ALA SER GLU ASN PRO LYS LEU PRO GLU SEQRES 12 B 540 LEU LEU LEU LYS ASN GLY ILE ALA PHE MET GLY PRO PRO SEQRES 13 B 540 SER GLN ALA MET TRP ALA LEU GLY ASP LYS ILE ALA SER SEQRES 14 B 540 SER ILE VAL ALA GLN THR ALA GLY ILE PRO THR LEU PRO SEQRES 15 B 540 TRP SER GLY SER GLY LEU ARG VAL ASP TRP GLN GLU ASN SEQRES 16 B 540 ASP PHE SER LYS ARG ILE LEU ASN VAL PRO GLN GLU LEU SEQRES 17 B 540 TYR GLU LYS GLY TYR VAL LYS ASP VAL ASP ASP GLY LEU SEQRES 18 B 540 GLN ALA ALA GLU GLU VAL GLY TYR PRO VAL MET ILE LYS SEQRES 19 B 540 ALA SER GLU GLY GLY GLY GLY LYS GLY ILE ARG LYS VAL SEQRES 20 B 540 ASN ASN ALA ASP ASP PHE PRO ASN LEU PHE ARG GLN VAL SEQRES 21 B 540 GLN ALA GLU VAL PRO GLY SER PRO ILE PHE VAL MET ARG SEQRES 22 B 540 LEU ALA LYS GLN SER ARG HIS LEU GLU VAL GLN ILE LEU SEQRES 23 B 540 ALA ASP GLN TYR GLY ASN ALA ILE SER LEU PHE GLY ARG SEQRES 24 B 540 ASP CYS SER VAL GLN ARG ARG HIS GLN LYS ILE ILE GLU SEQRES 25 B 540 GLU ALA PRO ALA THR ILE ALA THR PRO ALA VAL PHE GLU SEQRES 26 B 540 HIS MET GLU GLN CYS ALA VAL LYS LEU ALA LYS MET VAL SEQRES 27 B 540 GLY TYR VAL SER ALA GLY THR VAL GLU TYR LEU TYR SER SEQRES 28 B 540 GLN ASP GLY SER PHE TYR PHE LEU GLU LEU ASN PRO ARG SEQRES 29 B 540 LEU GLN VAL GLU HIS PRO CYS THR GLU MET VAL ALA ASP SEQRES 30 B 540 VAL ASN LEU PRO ALA ALA GLN LEU GLN ILE ALA MET GLY SEQRES 31 B 540 ILE PRO LEU TYR ARG ILE LYS ASP ILE ARG MET MET TYR SEQRES 32 B 540 GLY VAL SER PRO TRP GLY ASP SER PRO ILE ASP PHE GLU SEQRES 33 B 540 ASP SER ALA HIS VAL PRO CYS PRO ARG GLY HIS VAL ILE SEQRES 34 B 540 ALA ALA ARG ILE THR SER GLU ASN PRO ASP GLU GLY PHE SEQRES 35 B 540 LYS PRO SER SER GLY THR VAL GLN GLU LEU ASN PHE ARG SEQRES 36 B 540 SER ASN LYS ASN VAL TRP GLY TYR PHE SER VAL ALA ALA SEQRES 37 B 540 ALA GLY GLY LEU HIS GLU PHE ALA ASP SER GLN PHE GLY SEQRES 38 B 540 HIS CYS PHE SER TRP GLY GLU ASN ARG GLU GLU ALA ILE SEQRES 39 B 540 SER ASN MET VAL VAL ALA LEU LYS GLU LEU SER ILE ARG SEQRES 40 B 540 GLY ASP PHE ARG THR THR VAL GLU TYR LEU ILE LYS LEU SEQRES 41 B 540 LEU GLU THR GLU SER PHE GLN MET ASN ARG ILE ASP THR SEQRES 42 B 540 GLY TRP LEU ASP ARG LEU ILE FORMUL 3 HOH *213(H2 O) HELIX 1 1 SER A 141 PHE A 149 1 9 HELIX 2 2 ASN A 163 ARG A 183 1 21 HELIX 3 3 THR A 195 ALA A 201 1 7 HELIX 4 4 GLU A 204 ALA A 209 1 6 HELIX 5 5 PRO A 219 ASN A 223 5 5 HELIX 6 6 ASN A 226 ILE A 237 1 12 HELIX 7 7 PRO A 253 ASN A 262 1 10 HELIX 8 8 PRO A 270 ASP A 279 1 10 HELIX 9 9 ASP A 279 ALA A 290 1 12 HELIX 10 10 PRO A 319 TYR A 327 1 9 HELIX 11 11 ASP A 330 GLY A 342 1 13 HELIX 12 12 ASP A 366 VAL A 378 1 13 HELIX 13 13 THR A 434 GLY A 453 1 20 HELIX 14 14 HIS A 483 ASP A 491 1 9 HELIX 15 15 ASN A 493 MET A 503 1 11 HELIX 16 16 PRO A 506 ARG A 509 5 4 HELIX 17 17 ILE A 510 TYR A 517 1 8 HELIX 18 18 ASN A 603 ILE A 620 1 18 HELIX 19 19 ARG A 625 THR A 637 1 13 HELIX 20 20 THR A 637 MET A 642 1 6 HELIX 21 21 GLY A 648 ILE A 654 1 7 HELIX 22 22 SER B 141 PHE B 149 1 9 HELIX 23 23 ASN B 163 ARG B 183 1 21 HELIX 24 24 THR B 195 ALA B 201 1 7 HELIX 25 25 GLU B 204 ALA B 209 1 6 HELIX 26 26 ASN B 226 ILE B 237 1 12 HELIX 27 27 PRO B 253 ASN B 262 1 10 HELIX 28 28 PRO B 270 GLY B 278 1 9 HELIX 29 29 ASP B 279 ALA B 290 1 12 HELIX 30 30 PRO B 319 GLU B 324 1 6 HELIX 31 31 ASP B 330 GLY B 342 1 13 HELIX 32 32 ASP B 366 VAL B 378 1 13 HELIX 33 33 THR B 434 VAL B 452 1 19 HELIX 34 34 HIS B 483 ASP B 491 1 9 HELIX 35 35 ASN B 493 MET B 503 1 11 HELIX 36 36 PRO B 506 ARG B 509 5 4 HELIX 37 37 ILE B 510 TYR B 517 1 8 HELIX 38 38 ASN B 603 ILE B 620 1 18 HELIX 39 39 ARG B 621 PHE B 624 5 4 HELIX 40 40 ARG B 625 THR B 637 1 13 HELIX 41 41 THR B 637 MET B 642 1 6 HELIX 42 42 GLY B 648 LEU B 653 1 6 SHEET 1 AA 5 HIS A 211 PRO A 214 0 SHEET 2 AA 5 ARG A 189 VAL A 194 1 O VAL A 192 N VAL A 213 SHEET 3 AA 5 LYS A 157 ILE A 160 1 O VAL A 158 N VAL A 191 SHEET 4 AA 5 ALA A 241 TRP A 243 1 O ALA A 241 N LEU A 159 SHEET 5 AA 5 ALA A 265 PHE A 266 1 O ALA A 265 N VAL A 242 SHEET 1 AB 3 ILE A 358 VAL A 361 0 SHEET 2 AB 3 VAL A 345 ALA A 349 -1 O VAL A 345 N VAL A 361 SHEET 3 AB 3 ILE A 383 ARG A 387 -1 O PHE A 384 N LYS A 348 SHEET 1 AC 9 PHE A 470 ASN A 476 0 SHEET 2 AC 9 SER A 456 TYR A 464 -1 O THR A 459 N ASN A 476 SHEET 3 AC 9 ARG A 393 ALA A 401 -1 O ARG A 393 N TYR A 464 SHEET 4 AC 9 ALA A 407 ARG A 419 -1 O ILE A 408 N LEU A 400 SHEET 5 AC 9 GLN A 422 ALA A 428 -1 O GLN A 422 N ARG A 419 SHEET 6 AC 9 HIS A 541 ILE A 547 -1 O VAL A 542 N ALA A 428 SHEET 7 AC 9 PHE A 594 GLY A 601 -1 O GLY A 595 N ILE A 547 SHEET 8 AC 9 VAL A 574 SER A 579 -1 O TRP A 575 N PHE A 598 SHEET 9 AC 9 VAL A 563 ASN A 567 -1 O GLN A 564 N PHE A 578 SHEET 1 BA 5 HIS B 211 PRO B 214 0 SHEET 2 BA 5 ARG B 189 VAL B 194 1 O VAL B 192 N VAL B 213 SHEET 3 BA 5 LYS B 157 ILE B 160 1 O VAL B 158 N VAL B 191 SHEET 4 BA 5 ALA B 241 TRP B 243 1 O ALA B 241 N LEU B 159 SHEET 5 BA 5 ALA B 265 PHE B 266 1 O ALA B 265 N VAL B 242 SHEET 1 BB 3 ILE B 358 VAL B 361 0 SHEET 2 BB 3 VAL B 345 ALA B 349 -1 O VAL B 345 N VAL B 361 SHEET 3 BB 3 ILE B 383 ARG B 387 -1 O PHE B 384 N LYS B 348 SHEET 1 BC 9 PHE B 470 ASN B 476 0 SHEET 2 BC 9 SER B 456 SER B 465 -1 O THR B 459 N ASN B 476 SHEET 3 BC 9 SER B 392 ALA B 401 -1 O ARG B 393 N TYR B 464 SHEET 4 BC 9 ALA B 407 ARG B 419 -1 O ILE B 408 N LEU B 400 SHEET 5 BC 9 GLN B 422 ALA B 428 -1 O GLN B 422 N ARG B 419 SHEET 6 BC 9 HIS B 541 ILE B 547 -1 O VAL B 542 N ALA B 428 SHEET 7 BC 9 PHE B 594 GLY B 601 -1 O GLY B 595 N ILE B 547 SHEET 8 BC 9 VAL B 574 SER B 579 -1 O TRP B 575 N PHE B 598 SHEET 9 BC 9 VAL B 563 LEU B 566 -1 O GLN B 564 N PHE B 578 CISPEP 1 ILE A 237 PRO A 238 0 -7.75 CISPEP 2 TYR A 343 PRO A 344 0 -0.31 CISPEP 3 ALA A 428 PRO A 429 0 -0.91 CISPEP 4 ILE B 237 PRO B 238 0 -8.81 CISPEP 5 TYR B 343 PRO B 344 0 -1.60 CISPEP 6 ALA B 428 PRO B 429 0 -1.86 CRYST1 60.670 60.870 70.370 92.04 98.00 92.20 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016483 0.000633 0.002345 0.00000 SCALE2 0.000000 0.016441 0.000681 0.00000 SCALE3 0.000000 0.000000 0.014363 0.00000 MTRIX1 1 0.023800 -0.999400 -0.023200 -60.34190 1 MTRIX2 1 -0.999700 -0.023600 -0.008800 -60.39330 1 MTRIX3 1 0.008200 0.023400 -0.999700 -32.34530 1