HEADER IMMUNE SYSTEM 10-OCT-12 2YMX TITLE CRYSTAL STRUCTURE OF INHIBITORY ANTI-ACHE FAB408 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB ANTIBODY HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 FRAGMENT: VARIABLE DOMAIN; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB ANTIBODY LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 FRAGMENT: VARIABLE DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS IMMUNE SYSTEM, ACETYLCHOLINESTERASE, INHIBITION, BACK DOOR REGION EXPDTA X-RAY DIFFRACTION AUTHOR Y.BOURNE,L.RENAULT,S.ESSONO,G.MONDIELLI,P.LAMOURETTE,D.BOCQUET, AUTHOR 2 J.GRASSI,P.MARCHOT REVDAT 5 23-OCT-24 2YMX 1 REMARK REVDAT 4 20-DEC-23 2YMX 1 REMARK REVDAT 3 09-AUG-17 2YMX 1 REMARK REVDAT 2 30-OCT-13 2YMX 1 JRNL REVDAT 1 23-OCT-13 2YMX 0 JRNL AUTH Y.BOURNE,L.RENAULT,S.ESSONO,G.MONDIELLI,P.LAMOURETTE, JRNL AUTH 2 D.BOQUET,J.GRASSI,P.MARCHOT JRNL TITL MOLECULAR CHARACTERIZATION OF MONOCLONAL ANTIBODIES THAT JRNL TITL 2 INHIBIT ACETYLCHOLINESTERASE BY TARGETING THE PERIPHERAL JRNL TITL 3 SITE AND BACKDOOR REGION JRNL REF PLOS ONE V. 8 77266 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 24146971 JRNL DOI 10.1371/JOURNAL.PONE.0077226 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 34833 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.100 REMARK 3 FREE R VALUE TEST SET COUNT : 732 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2382 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3320 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 212 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.38000 REMARK 3 B22 (A**2) : 1.01000 REMARK 3 B33 (A**2) : -2.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.166 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.142 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.748 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3420 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4674 ; 1.347 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 436 ; 6.514 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;36.687 ;24.697 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 536 ;14.223 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;15.684 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 536 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2566 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1741 ; 1.091 ; 1.845 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2172 ; 1.871 ; 2.754 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1678 ; 1.337 ; 1.952 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5177 ; 6.250 ;16.213 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 108 REMARK 3 RESIDUE RANGE : H 1 H 124 REMARK 3 ORIGIN FOR THE GROUP (A): 22.4888 12.0193 35.6524 REMARK 3 T TENSOR REMARK 3 T11: 0.3216 T22: 0.1691 REMARK 3 T33: 0.1129 T12: -0.0169 REMARK 3 T13: 0.0733 T23: 0.0555 REMARK 3 L TENSOR REMARK 3 L11: 1.1385 L22: 2.8640 REMARK 3 L33: 2.2047 L12: 0.3447 REMARK 3 L13: -0.5955 L23: 1.0496 REMARK 3 S TENSOR REMARK 3 S11: -0.3236 S12: -0.0323 S13: -0.2242 REMARK 3 S21: 0.1895 S22: 0.2196 S23: 0.1572 REMARK 3 S31: 0.7599 S32: -0.0476 S33: 0.1039 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 109 L 212 REMARK 3 RESIDUE RANGE : H 125 H 224 REMARK 3 ORIGIN FOR THE GROUP (A): 10.8741 17.7850 3.0512 REMARK 3 T TENSOR REMARK 3 T11: 0.0187 T22: 0.2885 REMARK 3 T33: 0.1673 T12: -0.0048 REMARK 3 T13: -0.0176 T23: -0.1317 REMARK 3 L TENSOR REMARK 3 L11: 0.2475 L22: 5.0973 REMARK 3 L33: 1.3998 L12: -0.2580 REMARK 3 L13: -0.0545 L23: 0.7128 REMARK 3 S TENSOR REMARK 3 S11: -0.0118 S12: 0.2416 S13: -0.1464 REMARK 3 S21: -0.2232 S22: -0.0850 S23: 0.1616 REMARK 3 S31: -0.0936 S32: -0.2522 S33: 0.0968 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES WITH TLS ADDED. HYDROGENS HAVE REMARK 3 BEEN USED IF PRESENT IN THE INPUT REMARK 4 REMARK 4 2YMX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1290051524. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35565 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.44900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRIES 1FGV AND 1WEJ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 6000, 100 MM SODIUM CACODYLATE REMARK 280 PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.63200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.63200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.97500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.55550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.97500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.55550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.63200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.97500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 64.55550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.63200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.97500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 64.55550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H2004 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN H 142 REMARK 465 THR H 143 REMARK 465 CYS L 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 84 CG CD CE NZ REMARK 470 GLU L 213 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO H 14 21.79 -61.79 REMARK 500 ALA H 16 -172.85 -68.66 REMARK 500 SER H 99 -152.65 -110.66 REMARK 500 GLU H 107 64.53 -105.35 REMARK 500 TRP H 109 59.12 -112.40 REMARK 500 ALA H 140 -143.16 53.61 REMARK 500 ALA L 51 -32.86 67.49 REMARK 500 SER L 77 73.56 32.81 REMARK 500 SER L 92 -61.85 -92.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL L 1214 DBREF 2YMX H 1 224 PDB 2YMX 2YMX 1 224 DBREF 2YMX L 1 214 PDB 2YMX 2YMX 1 214 SEQRES 1 H 224 GLU VAL GLN LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 H 224 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 224 TYR SER PHE THR GLY TYR TYR MET ASN TRP VAL LYS GLN SEQRES 4 H 224 SER PRO GLU LYS SER LEU GLU TRP ILE GLY GLU MET SER SEQRES 5 H 224 PRO SER THR GLY ARG THR THR TYR ASN GLN ASN PHE LYS SEQRES 6 H 224 ALA LYS ALA THR LEU THR VAL ASP GLN SER SER SER THR SEQRES 7 H 224 ALA TYR MET GLN LEU LYS SER LEU THR SER GLU ASP SER SEQRES 8 H 224 ALA VAL TYR TYR CYS ALA ARG SER VAL PRO LEU THR THR SEQRES 9 H 224 LEU ILE GLU ASP TRP TYR PHE ASP VAL TRP GLY THR GLY SEQRES 10 H 224 THR THR VAL THR VAL SER SER ALA LYS THR THR PRO PRO SEQRES 11 H 224 SER VAL TYR PRO LEU ALA PRO GLY SER ALA ALA GLN THR SEQRES 12 H 224 ASN SER MET VAL THR LEU GLY CYS LEU VAL LYS GLY TYR SEQRES 13 H 224 PHE PRO GLU PRO VAL THR VAL THR TRP ASN SER GLY SER SEQRES 14 H 224 LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 224 SER ASP LEU TYR THR LEU SER SER SER VAL THR VAL PRO SEQRES 16 H 224 SER SER THR TRP PRO SER GLU THR VAL THR CYS ASN VAL SEQRES 17 H 224 ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS LYS ILE SEQRES 18 H 224 VAL PRO ARG SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO ALA SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ALA THR VAL THR ILE THR CYS ARG THR SER SEQRES 3 L 214 GLU ASN ILE ASP SER TYR LEU ALA TRP TYR GLN GLN ARG SEQRES 4 L 214 GLN GLY LYS SER PRO GLN LEU LEU VAL TYR ALA ALA THR SEQRES 5 L 214 ASN LEU ALA ASP GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR GLN TYR SER LEU LYS ILE ASN SER LEU SEQRES 7 L 214 GLN SER GLU ASP VAL ALA ARG TYR TYR CYS GLN HIS TYR SEQRES 8 L 214 SER THR THR PRO TRP THR PHE GLY GLY GLY THR GLN LEU SEQRES 9 L 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 214 PHE ASN ARG ASN GLU CYS HET GOL L1214 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *212(H2 O) HELIX 1 1 SER H 28 THR H 30 5 3 HELIX 2 2 GLN H 62 LYS H 65 5 4 HELIX 3 3 GLN H 74 SER H 76 5 3 HELIX 4 4 THR H 87 SER H 91 5 5 HELIX 5 5 SER H 167 SER H 169 5 3 HELIX 6 6 PRO H 211 SER H 214 5 4 HELIX 7 7 GLN L 79 VAL L 83 5 5 HELIX 8 8 SER L 121 THR L 126 1 6 HELIX 9 9 LYS L 183 ARG L 188 1 6 SHEET 1 HA 4 GLN H 3 GLN H 6 0 SHEET 2 HA 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 HA 4 THR H 78 LEU H 83 -1 O ALA H 79 N CYS H 22 SHEET 4 HA 4 ALA H 68 ASP H 73 -1 O THR H 69 N GLN H 82 SHEET 1 HB 4 GLU H 10 VAL H 12 0 SHEET 2 HB 4 THR H 118 VAL H 122 1 O THR H 119 N GLU H 10 SHEET 3 HB 4 ALA H 92 PRO H 101 -1 O ALA H 92 N VAL H 120 SHEET 4 HB 4 VAL H 113 TRP H 114 -1 O VAL H 113 N ARG H 98 SHEET 1 HC 6 GLU H 10 VAL H 12 0 SHEET 2 HC 6 THR H 118 VAL H 122 1 O THR H 119 N GLU H 10 SHEET 3 HC 6 ALA H 92 PRO H 101 -1 O ALA H 92 N VAL H 120 SHEET 4 HC 6 TYR H 32 GLN H 39 -1 O TYR H 33 N SER H 99 SHEET 5 HC 6 LEU H 45 MET H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 HC 6 THR H 58 TYR H 60 -1 O THR H 59 N GLU H 50 SHEET 1 HD 2 VAL H 113 TRP H 114 0 SHEET 2 HD 2 ALA H 92 PRO H 101 -1 N ARG H 98 O VAL H 113 SHEET 1 HE 4 SER H 131 LEU H 135 0 SHEET 2 HE 4 MET H 146 TYR H 156 -1 O GLY H 150 N LEU H 135 SHEET 3 HE 4 LEU H 185 PRO H 195 -1 O TYR H 186 N TYR H 156 SHEET 4 HE 4 VAL H 180 GLN H 182 1 O VAL H 180 N THR H 187 SHEET 1 HF 4 SER H 131 LEU H 135 0 SHEET 2 HF 4 MET H 146 TYR H 156 -1 O GLY H 150 N LEU H 135 SHEET 3 HF 4 LEU H 185 PRO H 195 -1 O TYR H 186 N TYR H 156 SHEET 4 HF 4 VAL H 174 THR H 176 -1 O HIS H 175 N SER H 191 SHEET 1 HG 2 VAL H 180 GLN H 182 0 SHEET 2 HG 2 LEU H 185 PRO H 195 1 O LEU H 185 N GLN H 182 SHEET 1 HH 3 THR H 162 TRP H 165 0 SHEET 2 HH 3 THR H 205 HIS H 210 -1 O ASN H 207 N THR H 164 SHEET 3 HH 3 THR H 215 LYS H 220 -1 O THR H 215 N HIS H 210 SHEET 1 LA 4 MET L 4 SER L 7 0 SHEET 2 LA 4 VAL L 19 THR L 25 -1 O THR L 22 N SER L 7 SHEET 3 LA 4 GLN L 70 ILE L 75 -1 O TYR L 71 N CYS L 23 SHEET 4 LA 4 PHE L 62 SER L 67 -1 O SER L 63 N LYS L 74 SHEET 1 LB 6 SER L 10 ALA L 13 0 SHEET 2 LB 6 THR L 102 ILE L 106 1 O GLN L 103 N LEU L 11 SHEET 3 LB 6 ARG L 85 HIS L 90 -1 O TYR L 86 N THR L 102 SHEET 4 LB 6 LEU L 33 GLN L 38 -1 O ALA L 34 N GLN L 89 SHEET 5 LB 6 GLN L 45 TYR L 49 -1 O GLN L 45 N GLN L 37 SHEET 6 LB 6 ASN L 53 LEU L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 LC 4 THR L 114 PHE L 118 0 SHEET 2 LC 4 GLY L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 LC 4 TYR L 173 THR L 182 -1 O TYR L 173 N PHE L 139 SHEET 4 LC 4 VAL L 159 TRP L 163 -1 O LEU L 160 N THR L 178 SHEET 1 LD 4 SER L 153 ARG L 155 0 SHEET 2 LD 4 ASN L 145 ILE L 150 -1 O TRP L 148 N ARG L 155 SHEET 3 LD 4 SER L 191 THR L 197 -1 O THR L 193 N LYS L 149 SHEET 4 LD 4 ILE L 205 ASN L 210 -1 O ILE L 205 N ALA L 196 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.04 SSBOND 2 CYS H 151 CYS H 206 1555 1555 2.04 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.11 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.05 CISPEP 1 PHE H 157 PRO H 158 0 -5.56 CISPEP 2 GLU H 159 PRO H 160 0 2.51 CISPEP 3 TRP H 199 PRO H 200 0 5.19 CISPEP 4 SER L 7 PRO L 8 0 -5.44 CISPEP 5 THR L 94 PRO L 95 0 -1.02 CISPEP 6 TYR L 140 PRO L 141 0 1.93 CISPEP 7 ARG L 211 ASN L 212 0 -9.89 SITE 1 AC1 10 PHE H 177 PRO H 178 THR H 187 LEU H 188 SITE 2 AC1 10 SER H 189 LEU L 160 SER L 162 SER L 176 SITE 3 AC1 10 SER L 177 THR L 178 CRYST1 69.950 129.111 99.264 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014296 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007745 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010074 0.00000