HEADER TRANSFERASE 13-OCT-12 2YNE TITLE PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A TITLE 2 BENZOTHIOPHENE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 2.3.1.97; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM VIVAX; SOURCE 3 ORGANISM_TAXID: 5855; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 DERIVATIVE KEYWDS TRANSFERASE, MYRISTOYLATION, MALARIA EXPDTA X-RAY DIFFRACTION AUTHOR M.H.WRIGHT,B.CLOUGH,M.D.RACKHAM,J.A.BRANNIGAN,M.GRAINGER, AUTHOR 2 A.R.BOTTRILL,W.P.HEAL,M.BRONCEL,R.A.SERWA,D.MANN,R.J.LEATHERBARROW, AUTHOR 3 A.J.WILKINSON,A.A.HOLDER,E.W.TATE REVDAT 3 12-JUL-17 2YNE 1 REVDAT 2 05-FEB-14 2YNE 1 JRNL REVDAT 1 15-JAN-14 2YNE 0 JRNL AUTH M.H.WRIGHT,B.CLOUGH,M.D.RACKHAM,K.RANGACHARI,J.A.BRANNIGAN, JRNL AUTH 2 M.GRAINGER,D.K.MOSS,A.R.BOTTRILL,W.P.HEAL,M.BRONCEL, JRNL AUTH 3 R.A.SERWA,D.BRADY,D.MANN,R.J.LEATHERBARROW,R.TEWARI, JRNL AUTH 4 A.J.WILKINSON,A.A.HOLDER,E.W.TATE JRNL TITL VALIDATION OF N-MYRISTOYLTRANSFERASE AS AN ANTIMALARIAL DRUG JRNL TITL 2 TARGET USING AN INTEGRATED CHEMICAL BIOLOGY APPROACH. JRNL REF NAT.CHEM. V. 6 112 2014 JRNL REFN ISSN 1755-4330 JRNL PMID 24451586 JRNL DOI 10.1038/NCHEM.1836 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 127171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6723 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9293 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 491 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9384 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 306 REMARK 3 SOLVENT ATOMS : 1375 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.52000 REMARK 3 B22 (A**2) : -0.32000 REMARK 3 B33 (A**2) : 0.84000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.280 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10316 ; 0.024 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14079 ; 2.280 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1238 ; 6.481 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 500 ;37.748 ;24.620 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1809 ;14.784 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;17.148 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1517 ; 0.168 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7817 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 2YNE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1290054475. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 134040 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.71000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AS, 25% PEG 3350, 0.1 M BIS-TRIS REMARK 280 PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.81000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.58000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.92500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.58000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.81000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.92500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 227 REMARK 465 SER C 228 REMARK 465 LEU C 229 REMARK 465 ASN C 230 REMARK 465 SER C 231 REMARK 465 ARG C 232 REMARK 465 LEU C 233 REMARK 465 THR C 234 REMARK 465 MET C 235 REMARK 465 SER C 236 REMARK 465 ARG C 237 REMARK 465 ALA C 238 REMARK 465 ILE C 239 REMARK 465 LYS C 240 REMARK 465 LEU C 241 REMARK 465 TYR C 242 REMARK 465 ARG C 243 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR C 28 O HOH A 2222 4456 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 32 CB TYR A 32 CG 0.102 REMARK 500 TYR A 393 CZ TYR A 393 CE2 0.079 REMARK 500 LYS B 257 CE LYS B 257 NZ 0.155 REMARK 500 TRP C 73 CE3 TRP C 73 CZ3 0.103 REMARK 500 GLU C 86 CD GLU C 86 OE1 0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 93 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG A 104 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 TYR A 107 CB - CG - CD1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 170 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 PHE A 336 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG B 104 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 LYS B 257 CD - CE - NZ ANGL. DEV. = 28.3 DEGREES REMARK 500 ASP C 98 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG C 173 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 214 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG C 254 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 28 63.70 33.09 REMARK 500 ASN A 48 81.42 -162.31 REMARK 500 ASN A 230 -179.75 175.34 REMARK 500 ASP A 246 46.49 -72.70 REMARK 500 VAL A 296 -69.44 -127.57 REMARK 500 PHE A 336 -91.40 -116.47 REMARK 500 GLU A 368 48.31 -76.14 REMARK 500 MET A 370 -131.80 47.81 REMARK 500 ASN B 48 82.97 -159.42 REMARK 500 ASP B 246 42.96 -75.14 REMARK 500 VAL B 296 -68.67 -133.12 REMARK 500 PHE B 336 -92.72 -115.02 REMARK 500 MET B 370 -139.24 53.74 REMARK 500 ASN C 48 81.83 -161.89 REMARK 500 TYR C 95 -158.15 -85.16 REMARK 500 ASP C 246 44.43 -77.57 REMARK 500 VAL C 296 -71.23 -135.78 REMARK 500 PHE C 336 -92.95 -114.17 REMARK 500 ASN C 360 18.00 80.51 REMARK 500 GLU C 368 45.23 -73.50 REMARK 500 MET C 370 -129.70 43.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2115 DISTANCE = 6.93 ANGSTROMS REMARK 525 HOH A2184 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH B2051 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH B2140 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH C2398 DISTANCE = 5.96 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1412 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 NHW A1000 O4A REMARK 620 2 NHW A1000 O2A 65.9 REMARK 620 3 LEU A 169 O 96.0 161.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1411 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 NHW B1000 O2A REMARK 620 2 LEU B 169 O 155.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C1411 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 NHW C1000 O2A REMARK 620 2 LEU C 169 O 163.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 999 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHW A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YNE A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 999 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHW B 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YNE B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS C 999 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHW C 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YNE C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 1411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1413 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1414 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 1412 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YNC RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE IN COMPLEX WITH YNC12-COA REMARK 900 THIOESTER. REMARK 900 RELATED ID: 2YND RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A PYRAZOLE REMARK 900 SULPHONAMIDE INHIBITOR. REMARK 900 RELATED ID: 4A95 RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH QUINOLINE INHIBITOR REMARK 900 RELATED ID: 4B10 RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A NON- HYDROLYSABLE CO- REMARK 900 FACTOR REMARK 900 RELATED ID: 4B11 RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOFURAN REMARK 900 INHIBITOR (COMPOUND 13) REMARK 900 RELATED ID: 4B12 RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOFURAN REMARK 900 INHIBITOR (COMPOUND 23) REMARK 900 RELATED ID: 4B13 RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOFURAN REMARK 900 INHIBITOR (COMPOUND 25) REMARK 900 RELATED ID: 4B14 RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOFURAN REMARK 900 INHIBITOR (COMPOUND 26) REMARK 900 RELATED ID: 4BBH RELATED DB: PDB REMARK 900 PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOTHIOPHENE REMARK 900 INHIBITOR DBREF 2YNE A 27 410 UNP A5K1A2 A5K1A2_PLAVS 27 410 DBREF 2YNE B 27 410 UNP A5K1A2 A5K1A2_PLAVS 27 410 DBREF 2YNE C 27 410 UNP A5K1A2 A5K1A2_PLAVS 27 410 SEQRES 1 A 384 ASP TYR LYS PHE TRP TYR THR GLN PRO VAL PRO LYS ILE SEQRES 2 A 384 ASN ASP GLU PHE ASN GLU SER VAL ASN GLU PRO PHE ILE SEQRES 3 A 384 SER ASP ASN LYS VAL GLU ASP VAL ARG LYS ASP GLU TYR SEQRES 4 A 384 LYS LEU PRO PRO GLY TYR SER TRP TYR VAL CYS ASP VAL SEQRES 5 A 384 LYS ASP GLU LYS ASP ARG SER GLU ILE TYR THR LEU LEU SEQRES 6 A 384 THR ASP ASN TYR VAL GLU ASP ASP ASP ASN ILE PHE ARG SEQRES 7 A 384 PHE ASN TYR SER ALA GLU PHE LEU LEU TRP ALA LEU THR SEQRES 8 A 384 SER PRO ASN TYR LEU LYS THR TRP HIS ILE GLY VAL LYS SEQRES 9 A 384 TYR ASP ALA SER ASN LYS LEU ILE GLY PHE ILE SER ALA SEQRES 10 A 384 ILE PRO THR ASP ILE CYS ILE HIS LYS ARG THR ILE LYS SEQRES 11 A 384 MET ALA GLU VAL ASN PHE LEU CYS VAL HIS LYS THR LEU SEQRES 12 A 384 ARG SER LYS ARG LEU ALA PRO VAL LEU ILE LYS GLU ILE SEQRES 13 A 384 THR ARG ARG ILE ASN LEU GLU ASN ILE TRP GLN ALA ILE SEQRES 14 A 384 TYR THR ALA GLY VAL TYR LEU PRO LYS PRO VAL SER ASP SEQRES 15 A 384 ALA ARG TYR TYR HIS ARG SER ILE ASN VAL LYS LYS LEU SEQRES 16 A 384 ILE GLU ILE GLY PHE SER SER LEU ASN SER ARG LEU THR SEQRES 17 A 384 MET SER ARG ALA ILE LYS LEU TYR ARG VAL GLU ASP THR SEQRES 18 A 384 LEU ASN ILE LYS ASN MET ARG LEU MET LYS LYS LYS ASP SEQRES 19 A 384 VAL GLU GLY VAL HIS LYS LEU LEU GLY SER TYR LEU GLU SEQRES 20 A 384 GLN PHE ASN LEU TYR ALA VAL PHE THR LYS GLU GLU ILE SEQRES 21 A 384 ALA HIS TRP PHE LEU PRO ILE GLU ASN VAL ILE TYR THR SEQRES 22 A 384 TYR VAL ASN GLU GLU ASN GLY LYS ILE LYS ASP MET ILE SEQRES 23 A 384 SER PHE TYR SER LEU PRO SER GLN ILE LEU GLY ASN ASP SEQRES 24 A 384 LYS TYR SER THR LEU ASN ALA ALA TYR SER PHE TYR ASN SEQRES 25 A 384 VAL THR THR THR ALA THR PHE LYS GLN LEU MET GLN ASP SEQRES 26 A 384 ALA ILE LEU LEU ALA LYS ARG ASN ASN PHE ASP VAL PHE SEQRES 27 A 384 ASN ALA LEU GLU VAL MET GLN ASN LYS SER VAL PHE GLU SEQRES 28 A 384 ASP LEU LYS PHE GLY GLU GLY ASP GLY SER LEU LYS TYR SEQRES 29 A 384 TYR LEU TYR ASN TRP LYS CYS ALA SER PHE ALA PRO ALA SEQRES 30 A 384 HIS VAL GLY ILE VAL LEU LEU SEQRES 1 B 384 ASP TYR LYS PHE TRP TYR THR GLN PRO VAL PRO LYS ILE SEQRES 2 B 384 ASN ASP GLU PHE ASN GLU SER VAL ASN GLU PRO PHE ILE SEQRES 3 B 384 SER ASP ASN LYS VAL GLU ASP VAL ARG LYS ASP GLU TYR SEQRES 4 B 384 LYS LEU PRO PRO GLY TYR SER TRP TYR VAL CYS ASP VAL SEQRES 5 B 384 LYS ASP GLU LYS ASP ARG SER GLU ILE TYR THR LEU LEU SEQRES 6 B 384 THR ASP ASN TYR VAL GLU ASP ASP ASP ASN ILE PHE ARG SEQRES 7 B 384 PHE ASN TYR SER ALA GLU PHE LEU LEU TRP ALA LEU THR SEQRES 8 B 384 SER PRO ASN TYR LEU LYS THR TRP HIS ILE GLY VAL LYS SEQRES 9 B 384 TYR ASP ALA SER ASN LYS LEU ILE GLY PHE ILE SER ALA SEQRES 10 B 384 ILE PRO THR ASP ILE CYS ILE HIS LYS ARG THR ILE LYS SEQRES 11 B 384 MET ALA GLU VAL ASN PHE LEU CYS VAL HIS LYS THR LEU SEQRES 12 B 384 ARG SER LYS ARG LEU ALA PRO VAL LEU ILE LYS GLU ILE SEQRES 13 B 384 THR ARG ARG ILE ASN LEU GLU ASN ILE TRP GLN ALA ILE SEQRES 14 B 384 TYR THR ALA GLY VAL TYR LEU PRO LYS PRO VAL SER ASP SEQRES 15 B 384 ALA ARG TYR TYR HIS ARG SER ILE ASN VAL LYS LYS LEU SEQRES 16 B 384 ILE GLU ILE GLY PHE SER SER LEU ASN SER ARG LEU THR SEQRES 17 B 384 MET SER ARG ALA ILE LYS LEU TYR ARG VAL GLU ASP THR SEQRES 18 B 384 LEU ASN ILE LYS ASN MET ARG LEU MET LYS LYS LYS ASP SEQRES 19 B 384 VAL GLU GLY VAL HIS LYS LEU LEU GLY SER TYR LEU GLU SEQRES 20 B 384 GLN PHE ASN LEU TYR ALA VAL PHE THR LYS GLU GLU ILE SEQRES 21 B 384 ALA HIS TRP PHE LEU PRO ILE GLU ASN VAL ILE TYR THR SEQRES 22 B 384 TYR VAL ASN GLU GLU ASN GLY LYS ILE LYS ASP MET ILE SEQRES 23 B 384 SER PHE TYR SER LEU PRO SER GLN ILE LEU GLY ASN ASP SEQRES 24 B 384 LYS TYR SER THR LEU ASN ALA ALA TYR SER PHE TYR ASN SEQRES 25 B 384 VAL THR THR THR ALA THR PHE LYS GLN LEU MET GLN ASP SEQRES 26 B 384 ALA ILE LEU LEU ALA LYS ARG ASN ASN PHE ASP VAL PHE SEQRES 27 B 384 ASN ALA LEU GLU VAL MET GLN ASN LYS SER VAL PHE GLU SEQRES 28 B 384 ASP LEU LYS PHE GLY GLU GLY ASP GLY SER LEU LYS TYR SEQRES 29 B 384 TYR LEU TYR ASN TRP LYS CYS ALA SER PHE ALA PRO ALA SEQRES 30 B 384 HIS VAL GLY ILE VAL LEU LEU SEQRES 1 C 384 ASP TYR LYS PHE TRP TYR THR GLN PRO VAL PRO LYS ILE SEQRES 2 C 384 ASN ASP GLU PHE ASN GLU SER VAL ASN GLU PRO PHE ILE SEQRES 3 C 384 SER ASP ASN LYS VAL GLU ASP VAL ARG LYS ASP GLU TYR SEQRES 4 C 384 LYS LEU PRO PRO GLY TYR SER TRP TYR VAL CYS ASP VAL SEQRES 5 C 384 LYS ASP GLU LYS ASP ARG SER GLU ILE TYR THR LEU LEU SEQRES 6 C 384 THR ASP ASN TYR VAL GLU ASP ASP ASP ASN ILE PHE ARG SEQRES 7 C 384 PHE ASN TYR SER ALA GLU PHE LEU LEU TRP ALA LEU THR SEQRES 8 C 384 SER PRO ASN TYR LEU LYS THR TRP HIS ILE GLY VAL LYS SEQRES 9 C 384 TYR ASP ALA SER ASN LYS LEU ILE GLY PHE ILE SER ALA SEQRES 10 C 384 ILE PRO THR ASP ILE CYS ILE HIS LYS ARG THR ILE LYS SEQRES 11 C 384 MET ALA GLU VAL ASN PHE LEU CYS VAL HIS LYS THR LEU SEQRES 12 C 384 ARG SER LYS ARG LEU ALA PRO VAL LEU ILE LYS GLU ILE SEQRES 13 C 384 THR ARG ARG ILE ASN LEU GLU ASN ILE TRP GLN ALA ILE SEQRES 14 C 384 TYR THR ALA GLY VAL TYR LEU PRO LYS PRO VAL SER ASP SEQRES 15 C 384 ALA ARG TYR TYR HIS ARG SER ILE ASN VAL LYS LYS LEU SEQRES 16 C 384 ILE GLU ILE GLY PHE SER SER LEU ASN SER ARG LEU THR SEQRES 17 C 384 MET SER ARG ALA ILE LYS LEU TYR ARG VAL GLU ASP THR SEQRES 18 C 384 LEU ASN ILE LYS ASN MET ARG LEU MET LYS LYS LYS ASP SEQRES 19 C 384 VAL GLU GLY VAL HIS LYS LEU LEU GLY SER TYR LEU GLU SEQRES 20 C 384 GLN PHE ASN LEU TYR ALA VAL PHE THR LYS GLU GLU ILE SEQRES 21 C 384 ALA HIS TRP PHE LEU PRO ILE GLU ASN VAL ILE TYR THR SEQRES 22 C 384 TYR VAL ASN GLU GLU ASN GLY LYS ILE LYS ASP MET ILE SEQRES 23 C 384 SER PHE TYR SER LEU PRO SER GLN ILE LEU GLY ASN ASP SEQRES 24 C 384 LYS TYR SER THR LEU ASN ALA ALA TYR SER PHE TYR ASN SEQRES 25 C 384 VAL THR THR THR ALA THR PHE LYS GLN LEU MET GLN ASP SEQRES 26 C 384 ALA ILE LEU LEU ALA LYS ARG ASN ASN PHE ASP VAL PHE SEQRES 27 C 384 ASN ALA LEU GLU VAL MET GLN ASN LYS SER VAL PHE GLU SEQRES 28 C 384 ASP LEU LYS PHE GLY GLU GLY ASP GLY SER LEU LYS TYR SEQRES 29 C 384 TYR LEU TYR ASN TRP LYS CYS ALA SER PHE ALA PRO ALA SEQRES 30 C 384 HIS VAL GLY ILE VAL LEU LEU HET DMS A 999 4 HET NHW A1000 64 HET YNE A1001 30 HET SO4 A1411 5 HET MG A1412 1 HET CL A1413 1 HET CL A1414 1 HET DMS B 999 4 HET NHW B1000 64 HET YNE B1001 30 HET MG B1411 1 HET CL B1412 1 HET DMS C 999 4 HET NHW C1000 64 HET YNE C1001 30 HET MG C1411 1 HET CL C1412 1 HETNAM DMS DIMETHYL SULFOXIDE HETNAM NHW 2-OXOPENTADECYL-COA HETNAM YNE 2-(3-PIPERIDIN-4-YLOXY-1-BENZOTHIOPHEN-2-YL)-5-[(1,3,5- HETNAM 2 YNE TRIMETHYLPYRAZOL-4-YL)METHYL]-1,3,4-OXADIAZOLE HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 4 DMS 3(C2 H6 O S) FORMUL 5 NHW 3(C36 H64 N7 O17 P3 S) FORMUL 6 YNE 3(C22 H25 N5 O2 S) FORMUL 7 SO4 O4 S 2- FORMUL 8 MG 3(MG 2+) FORMUL 9 CL 4(CL 1-) FORMUL 21 HOH *1375(H2 O) HELIX 1 1 PHE A 30 GLN A 34 5 5 HELIX 2 2 LYS A 56 VAL A 60 5 5 HELIX 3 3 ASP A 80 TYR A 95 1 16 HELIX 4 4 SER A 108 THR A 117 1 10 HELIX 5 5 LEU A 122 THR A 124 5 3 HELIX 6 6 LYS A 167 ARG A 170 5 4 HELIX 7 7 ARG A 173 LEU A 188 1 16 HELIX 8 8 ASN A 217 ILE A 224 1 8 HELIX 9 9 THR A 234 ARG A 243 1 10 HELIX 10 10 LYS A 257 LYS A 259 5 3 HELIX 11 11 ASP A 260 GLU A 273 1 14 HELIX 12 12 THR A 282 LEU A 291 1 10 HELIX 13 13 THR A 344 ASN A 359 1 16 HELIX 14 14 GLN A 371 PHE A 376 5 6 HELIX 15 15 ALA A 401 HIS A 404 5 4 HELIX 16 16 PHE B 30 GLN B 34 5 5 HELIX 17 17 LYS B 56 VAL B 60 5 5 HELIX 18 18 ASP B 80 TYR B 95 1 16 HELIX 19 19 SER B 108 THR B 117 1 10 HELIX 20 20 LEU B 122 THR B 124 5 3 HELIX 21 21 LYS B 167 ARG B 170 5 4 HELIX 22 22 ARG B 173 LEU B 188 1 16 HELIX 23 23 ASN B 217 ILE B 224 1 8 HELIX 24 24 THR B 234 ARG B 243 1 10 HELIX 25 25 LYS B 257 LYS B 259 5 3 HELIX 26 26 ASP B 260 GLU B 273 1 14 HELIX 27 27 THR B 282 LEU B 291 1 10 HELIX 28 28 THR B 344 ASN B 359 1 16 HELIX 29 29 GLN B 371 PHE B 376 5 6 HELIX 30 30 ALA B 401 ALA B 403 5 3 HELIX 31 31 PHE C 30 GLN C 34 5 5 HELIX 32 32 LYS C 56 VAL C 60 5 5 HELIX 33 33 ASP C 80 TYR C 95 1 16 HELIX 34 34 SER C 108 THR C 117 1 10 HELIX 35 35 LEU C 122 THR C 124 5 3 HELIX 36 36 LYS C 167 ARG C 170 5 4 HELIX 37 37 ARG C 173 LEU C 188 1 16 HELIX 38 38 ASN C 217 GLY C 225 1 9 HELIX 39 39 LYS C 257 LYS C 259 5 3 HELIX 40 40 ASP C 260 GLU C 273 1 14 HELIX 41 41 THR C 282 LEU C 291 1 10 HELIX 42 42 THR C 344 ASN C 359 1 16 HELIX 43 43 GLN C 371 PHE C 376 5 6 HELIX 44 44 ALA C 401 ALA C 403 5 3 SHEET 1 AA 2 ASN A 48 GLU A 49 0 SHEET 2 AA 2 LYS A 396 CYS A 397 -1 O LYS A 396 N GLU A 49 SHEET 1 AB 4 TYR A 71 VAL A 75 0 SHEET 2 AB 4 HIS A 126 TYR A 131 -1 O GLY A 128 N TYR A 74 SHEET 3 AB 4 LYS A 136 ILE A 150 -1 O LYS A 136 N TYR A 131 SHEET 4 AB 4 LEU A 277 ALA A 279 1 O TYR A 278 N CYS A 149 SHEET 1 AC11 TYR A 71 VAL A 75 0 SHEET 2 AC11 HIS A 126 TYR A 131 -1 O GLY A 128 N TYR A 74 SHEET 3 AC11 LYS A 136 ILE A 150 -1 O LYS A 136 N TYR A 131 SHEET 4 AC11 ARG A 153 VAL A 165 -1 O ARG A 153 N ILE A 150 SHEET 5 AC11 GLN A 193 ALA A 198 1 O GLN A 193 N ALA A 158 SHEET 6 AC11 GLY A 382 TYR A 393 -1 O LYS A 389 N ALA A 198 SHEET 7 AC11 SER A 207 SER A 215 -1 O SER A 207 N TYR A 390 SHEET 8 AC11 VAL A 363 LEU A 367 -1 O PHE A 364 N ARG A 214 SHEET 9 AC11 ALA A 332 SER A 335 1 O ALA A 333 N ASN A 365 SHEET 10 AC11 LYS A 307 SER A 316 -1 O TYR A 315 N TYR A 334 SHEET 11 AC11 VAL A 339 THR A 340 -1 O VAL A 339 N MET A 311 SHEET 1 AD12 TYR A 71 VAL A 75 0 SHEET 2 AD12 HIS A 126 TYR A 131 -1 O GLY A 128 N TYR A 74 SHEET 3 AD12 LYS A 136 ILE A 150 -1 O LYS A 136 N TYR A 131 SHEET 4 AD12 ARG A 153 VAL A 165 -1 O ARG A 153 N ILE A 150 SHEET 5 AD12 GLN A 193 ALA A 198 1 O GLN A 193 N ALA A 158 SHEET 6 AD12 GLY A 382 TYR A 393 -1 O LYS A 389 N ALA A 198 SHEET 7 AD12 SER A 207 SER A 215 -1 O SER A 207 N TYR A 390 SHEET 8 AD12 VAL A 363 LEU A 367 -1 O PHE A 364 N ARG A 214 SHEET 9 AD12 ALA A 332 SER A 335 1 O ALA A 333 N ASN A 365 SHEET 10 AD12 LYS A 307 SER A 316 -1 O TYR A 315 N TYR A 334 SHEET 11 AD12 ILE A 297 GLU A 304 -1 O TYR A 298 N PHE A 314 SHEET 12 AD12 ARG A 254 LEU A 255 -1 O ARG A 254 N VAL A 301 SHEET 1 AE 2 LEU A 277 ALA A 279 0 SHEET 2 AE 2 LYS A 136 ILE A 150 1 O CYS A 149 N TYR A 278 SHEET 1 AF 2 VAL A 339 THR A 340 0 SHEET 2 AF 2 LYS A 307 SER A 316 -1 O MET A 311 N VAL A 339 SHEET 1 AG 3 PHE A 103 PHE A 105 0 SHEET 2 AG 3 SER A 319 ILE A 321 -1 O GLN A 320 N ARG A 104 SHEET 3 AG 3 THR A 329 LEU A 330 -1 O LEU A 330 N SER A 319 SHEET 1 BA 2 ASN B 48 GLU B 49 0 SHEET 2 BA 2 LYS B 396 CYS B 397 -1 O LYS B 396 N GLU B 49 SHEET 1 BB 5 TYR B 71 VAL B 75 0 SHEET 2 BB 5 HIS B 126 TYR B 131 -1 O GLY B 128 N TYR B 74 SHEET 3 BB 5 LYS B 136 ILE B 150 -1 O LYS B 136 N TYR B 131 SHEET 4 BB 5 LEU B 277 ALA B 279 1 O TYR B 278 N CYS B 149 SHEET 5 BB 5 VAL B 405 GLY B 406 1 O GLY B 406 N ALA B 279 SHEET 1 BC11 TYR B 71 VAL B 75 0 SHEET 2 BC11 HIS B 126 TYR B 131 -1 O GLY B 128 N TYR B 74 SHEET 3 BC11 LYS B 136 ILE B 150 -1 O LYS B 136 N TYR B 131 SHEET 4 BC11 ARG B 153 VAL B 165 -1 O ARG B 153 N ILE B 150 SHEET 5 BC11 ALA B 194 ALA B 198 1 O ILE B 195 N VAL B 160 SHEET 6 BC11 GLY B 382 TYR B 393 -1 O LYS B 389 N ALA B 198 SHEET 7 BC11 SER B 207 SER B 215 -1 O SER B 207 N TYR B 390 SHEET 8 BC11 VAL B 363 LEU B 367 -1 O PHE B 364 N ARG B 214 SHEET 9 BC11 ALA B 332 SER B 335 1 O ALA B 333 N ASN B 365 SHEET 10 BC11 LYS B 307 SER B 316 -1 O TYR B 315 N TYR B 334 SHEET 11 BC11 VAL B 339 THR B 340 -1 O VAL B 339 N MET B 311 SHEET 1 BD12 TYR B 71 VAL B 75 0 SHEET 2 BD12 HIS B 126 TYR B 131 -1 O GLY B 128 N TYR B 74 SHEET 3 BD12 LYS B 136 ILE B 150 -1 O LYS B 136 N TYR B 131 SHEET 4 BD12 ARG B 153 VAL B 165 -1 O ARG B 153 N ILE B 150 SHEET 5 BD12 ALA B 194 ALA B 198 1 O ILE B 195 N VAL B 160 SHEET 6 BD12 GLY B 382 TYR B 393 -1 O LYS B 389 N ALA B 198 SHEET 7 BD12 SER B 207 SER B 215 -1 O SER B 207 N TYR B 390 SHEET 8 BD12 VAL B 363 LEU B 367 -1 O PHE B 364 N ARG B 214 SHEET 9 BD12 ALA B 332 SER B 335 1 O ALA B 333 N ASN B 365 SHEET 10 BD12 LYS B 307 SER B 316 -1 O TYR B 315 N TYR B 334 SHEET 11 BD12 ILE B 297 GLU B 304 -1 O TYR B 298 N PHE B 314 SHEET 12 BD12 ARG B 254 LEU B 255 -1 O ARG B 254 N VAL B 301 SHEET 1 BE 2 VAL B 339 THR B 340 0 SHEET 2 BE 2 LYS B 307 SER B 316 -1 O MET B 311 N VAL B 339 SHEET 1 BF 3 PHE B 103 PHE B 105 0 SHEET 2 BF 3 SER B 319 ILE B 321 -1 O GLN B 320 N ARG B 104 SHEET 3 BF 3 THR B 329 LEU B 330 -1 O LEU B 330 N SER B 319 SHEET 1 CA 2 ASN C 48 GLU C 49 0 SHEET 2 CA 2 LYS C 396 CYS C 397 -1 O LYS C 396 N GLU C 49 SHEET 1 CB 5 TYR C 71 VAL C 75 0 SHEET 2 CB 5 HIS C 126 TYR C 131 -1 O GLY C 128 N TYR C 74 SHEET 3 CB 5 LEU C 137 ILE C 150 -1 N ILE C 138 O VAL C 129 SHEET 4 CB 5 LEU C 277 ALA C 279 1 O TYR C 278 N CYS C 149 SHEET 5 CB 5 VAL C 405 GLY C 406 1 O GLY C 406 N ALA C 279 SHEET 1 CC11 TYR C 71 VAL C 75 0 SHEET 2 CC11 HIS C 126 TYR C 131 -1 O GLY C 128 N TYR C 74 SHEET 3 CC11 LEU C 137 ILE C 150 -1 N ILE C 138 O VAL C 129 SHEET 4 CC11 ARG C 153 VAL C 165 -1 O ARG C 153 N ILE C 150 SHEET 5 CC11 GLN C 193 ALA C 198 1 O GLN C 193 N ALA C 158 SHEET 6 CC11 GLY C 382 TYR C 393 -1 O LYS C 389 N ALA C 198 SHEET 7 CC11 SER C 207 SER C 215 -1 O SER C 207 N TYR C 390 SHEET 8 CC11 VAL C 363 LEU C 367 -1 O PHE C 364 N ARG C 214 SHEET 9 CC11 ALA C 332 SER C 335 1 O ALA C 333 N ASN C 365 SHEET 10 CC11 LYS C 307 SER C 316 -1 O TYR C 315 N TYR C 334 SHEET 11 CC11 VAL C 339 THR C 340 -1 O VAL C 339 N MET C 311 SHEET 1 CD12 TYR C 71 VAL C 75 0 SHEET 2 CD12 HIS C 126 TYR C 131 -1 O GLY C 128 N TYR C 74 SHEET 3 CD12 LEU C 137 ILE C 150 -1 N ILE C 138 O VAL C 129 SHEET 4 CD12 ARG C 153 VAL C 165 -1 O ARG C 153 N ILE C 150 SHEET 5 CD12 GLN C 193 ALA C 198 1 O GLN C 193 N ALA C 158 SHEET 6 CD12 GLY C 382 TYR C 393 -1 O LYS C 389 N ALA C 198 SHEET 7 CD12 SER C 207 SER C 215 -1 O SER C 207 N TYR C 390 SHEET 8 CD12 VAL C 363 LEU C 367 -1 O PHE C 364 N ARG C 214 SHEET 9 CD12 ALA C 332 SER C 335 1 O ALA C 333 N ASN C 365 SHEET 10 CD12 LYS C 307 SER C 316 -1 O TYR C 315 N TYR C 334 SHEET 11 CD12 ILE C 297 GLU C 304 -1 O TYR C 298 N PHE C 314 SHEET 12 CD12 ARG C 254 LEU C 255 -1 O ARG C 254 N VAL C 301 SHEET 1 CE 2 VAL C 339 THR C 340 0 SHEET 2 CE 2 LYS C 307 SER C 316 -1 O MET C 311 N VAL C 339 SHEET 1 CF 3 PHE C 103 PHE C 105 0 SHEET 2 CF 3 SER C 319 ILE C 321 -1 O GLN C 320 N ARG C 104 SHEET 3 CF 3 THR C 329 LEU C 330 -1 O LEU C 330 N SER C 319 LINK O4A NHW A1000 MG MG A1412 1555 1555 2.85 LINK O2A NHW A1000 MG MG A1412 1555 1555 2.83 LINK MG MG A1412 O LEU A 169 1555 1555 2.86 LINK O2A NHW B1000 MG MG B1411 1555 1555 2.90 LINK MG MG B1411 O LEU B 169 1555 1555 2.82 LINK O2A NHW C1000 MG MG C1411 1555 1555 2.92 LINK MG MG C1411 O LEU C 169 1555 1555 2.74 CISPEP 1 PRO A 203 LYS A 204 0 -13.11 CISPEP 2 PRO B 203 LYS B 204 0 -20.55 CISPEP 3 PRO C 203 LYS C 204 0 -18.77 SITE 1 AC1 4 GLU A 159 PHE A 281 TRP A 289 HOH A2440 SITE 1 AC2 39 TYR A 28 LYS A 29 PHE A 30 TRP A 31 SITE 2 AC2 39 ASN A 94 TYR A 95 VAL A 96 ASN A 161 SITE 3 AC2 39 PHE A 162 LEU A 163 CYS A 164 VAL A 165 SITE 4 AC2 39 ARG A 170 SER A 171 LYS A 172 ARG A 173 SITE 5 AC2 39 LEU A 174 ALA A 175 PRO A 176 THR A 183 SITE 6 AC2 39 ILE A 186 ASN A 187 TRP A 192 GLN A 193 SITE 7 AC2 39 ALA A 194 THR A 197 LEU A 202 TYR A 393 SITE 8 AC2 39 MG A1412 HOH A2001 HOH A2002 HOH A2258 SITE 9 AC2 39 HOH A2266 HOH A2499 HOH A2500 HOH A2501 SITE 10 AC2 39 HOH A2502 HOH A2503 HOH A2504 SITE 1 AC3 20 VAL A 96 GLU A 97 PHE A 105 TYR A 107 SITE 2 AC3 20 THR A 197 TYR A 211 HIS A 213 TYR A 315 SITE 3 AC3 20 SER A 319 TYR A 334 SER A 335 ASN A 365 SITE 4 AC3 20 ALA A 366 LEU A 367 LEU A 388 LEU A 409 SITE 5 AC3 20 LEU A 410 HOH A2283 HOH A2284 HOH A2423 SITE 1 AC4 4 GLU B 159 PHE B 281 TRP B 289 HOH B2408 SITE 1 AC5 38 TYR B 28 LYS B 29 PHE B 30 TRP B 31 SITE 2 AC5 38 ASN B 94 TYR B 95 VAL B 96 ASN B 161 SITE 3 AC5 38 PHE B 162 LEU B 163 CYS B 164 VAL B 165 SITE 4 AC5 38 ARG B 170 SER B 171 LYS B 172 ARG B 173 SITE 5 AC5 38 LEU B 174 ALA B 175 PRO B 176 THR B 183 SITE 6 AC5 38 ILE B 186 ASN B 187 TRP B 192 THR B 197 SITE 7 AC5 38 LEU B 202 TYR B 393 MG B1411 HOH B2001 SITE 8 AC5 38 HOH B2002 HOH B2244 HOH B2250 HOH B2251 SITE 9 AC5 38 HOH B2463 HOH B2464 HOH B2465 HOH B2466 SITE 10 AC5 38 HOH B2467 HOH B2468 SITE 1 AC6 20 VAL B 96 GLU B 97 PHE B 105 TYR B 107 SITE 2 AC6 20 THR B 197 TYR B 211 TYR B 315 SER B 319 SITE 3 AC6 20 TYR B 334 SER B 335 ASN B 365 ALA B 366 SITE 4 AC6 20 LEU B 367 LEU B 388 LEU B 409 LEU B 410 SITE 5 AC6 20 HOH B2238 HOH B2265 HOH B2392 HOH B2470 SITE 1 AC7 4 GLU C 159 PHE C 281 TRP C 289 HOH C2338 SITE 1 AC8 35 TYR C 28 LYS C 29 PHE C 30 TRP C 31 SITE 2 AC8 35 ASN C 94 TYR C 95 ASN C 161 PHE C 162 SITE 3 AC8 35 LEU C 163 CYS C 164 VAL C 165 ARG C 170 SITE 4 AC8 35 SER C 171 LYS C 172 ARG C 173 LEU C 174 SITE 5 AC8 35 ALA C 175 PRO C 176 THR C 183 ASN C 187 SITE 6 AC8 35 TRP C 192 TYR C 196 THR C 197 LEU C 202 SITE 7 AC8 35 TYR C 393 MG C1411 HOH C2001 HOH C2194 SITE 8 AC8 35 HOH C2199 HOH C2391 HOH C2392 HOH C2393 SITE 9 AC8 35 HOH C2394 HOH C2395 HOH C2396 SITE 1 AC9 20 VAL C 96 GLU C 97 ASP C 98 PHE C 105 SITE 2 AC9 20 TYR C 107 THR C 197 TYR C 211 TYR C 315 SITE 3 AC9 20 TYR C 334 SER C 335 ASN C 365 ALA C 366 SITE 4 AC9 20 LEU C 367 LEU C 388 VAL C 408 LEU C 409 SITE 5 AC9 20 LEU C 410 HOH C2214 HOH C2326 HOH C2397 SITE 1 BC1 4 ARG A 210 HOH A2506 ARG B 210 LYS B 373 SITE 1 BC2 6 LEU A 169 SER A 171 LYS A 172 ARG A 173 SITE 2 BC2 6 LEU A 174 NHW A1000 SITE 1 BC3 6 LEU C 169 SER C 171 LYS C 172 ARG C 173 SITE 2 BC3 6 LEU C 174 NHW C1000 SITE 1 BC4 6 LEU B 169 SER B 171 LYS B 172 ARG B 173 SITE 2 BC4 6 LEU B 174 NHW B1000 SITE 1 BC5 2 SER A 328 THR A 329 SITE 1 BC6 5 LYS A 180 THR A 247 LEU A 248 ARG A 358 SITE 2 BC6 5 HOH A2351 SITE 1 BC7 4 LYS B 180 THR B 247 LEU B 248 ARG B 358 SITE 1 BC8 4 LYS C 180 THR C 247 LEU C 248 ARG C 358 CRYST1 57.620 121.850 179.160 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017355 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005582 0.00000