HEADER TRANSCRIPTION 31-OCT-12 2YPR TITLE CRYSTAL STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN PROTEIN FEV COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FEV; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ETS DOMAIN, RESIDUES 42-141; COMPND 5 SYNONYM: FIFTH EWING VARIANT PROTEIN, PC12 ETS DOMAIN-CONTAINING COMPND 6 TRANSCRIPTION FACTOR 1, PC12 ETS FACTOR 1, PET-1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.K.ALLERSTON,C.COOPER,M.VOLLMAR,T.KROJER,F.VON DELFT,J.WEIGELT, AUTHOR 2 C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,O.GILEADI REVDAT 5 16-OCT-24 2YPR 1 REMARK REVDAT 4 20-DEC-23 2YPR 1 REMARK REVDAT 3 10-JUN-15 2YPR 1 JRNL REVDAT 2 29-APR-15 2YPR 1 JRNL REVDAT 1 16-JAN-13 2YPR 0 JRNL AUTH C.D.O.COOPER,J.A.NEWMAN,H.AITKENHEAD,C.K.ALLERSTON,O.GILEADI JRNL TITL STRUCTURES OF THE ETS DOMAINS OF TRANSCRIPTION FACTORS ETV1, JRNL TITL 2 ETV4, ETV5 AND FEV: DETERMINANTS OF DNA BINDING AND REDOX JRNL TITL 3 REGULATION BY DISULFIDE BOND FORMATION. JRNL REF J.BIOL.CHEM. V. 290 13692 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 25866208 JRNL DOI 10.1074/JBC.M115.646737 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 11771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.750 REMARK 3 FREE R VALUE TEST SET COUNT : 559 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.89 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2730 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2365 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2604 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE : 0.2269 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.62 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 126 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1484 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 102.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.449 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.296 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.214 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.289 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.213 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1529 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2062 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 685 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 36 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 227 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1529 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 178 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1645 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.88 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.19 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.04 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -8.7522 7.6287 20.7694 REMARK 3 T TENSOR REMARK 3 T11: 0.0384 T22: 0.0850 REMARK 3 T33: -0.1536 T12: 0.0194 REMARK 3 T13: -0.0712 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 3.8197 L22: 6.1834 REMARK 3 L33: 5.9898 L12: -0.9986 REMARK 3 L13: 0.2164 L23: -1.5501 REMARK 3 S TENSOR REMARK 3 S11: -0.1045 S12: -0.4825 S13: 0.0243 REMARK 3 S21: 0.4318 S22: -0.1801 S23: -0.2192 REMARK 3 S31: -0.5986 S32: -0.4798 S33: 0.2846 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -18.7440 20.6183 6.5629 REMARK 3 T TENSOR REMARK 3 T11: -0.0344 T22: 0.0160 REMARK 3 T33: -0.2400 T12: 0.1532 REMARK 3 T13: -0.0634 T23: -0.0532 REMARK 3 L TENSOR REMARK 3 L11: 4.6436 L22: 3.6466 REMARK 3 L33: 4.0629 L12: -1.5280 REMARK 3 L13: 0.4718 L23: -1.8656 REMARK 3 S TENSOR REMARK 3 S11: -0.1210 S12: -0.2663 S13: 0.0879 REMARK 3 S21: 0.3860 S22: 0.2085 S23: 0.0071 REMARK 3 S31: -0.5806 S32: -0.7578 S33: -0.0874 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YPR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1290054682. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11808 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 75.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 15.90 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 16.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1FLI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG3350, 5% GLYCEROL, 100 MM REMARK 280 CITRATE PH 5.3 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 65.38500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.38500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.38500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.38500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 65.38500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.38500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 65.38500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 65.38500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 65.38500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 65.38500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 65.38500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 65.38500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 65.38500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 65.38500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 65.38500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 65.38500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 65.38500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 65.38500 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 32.69250 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 98.07750 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 98.07750 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 32.69250 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 32.69250 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 32.69250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 98.07750 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 98.07750 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 32.69250 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 98.07750 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 32.69250 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 98.07750 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 32.69250 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 98.07750 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 98.07750 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 98.07750 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 32.69250 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 98.07750 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 32.69250 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 32.69250 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 32.69250 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 98.07750 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 98.07750 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 32.69250 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 32.69250 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 98.07750 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 98.07750 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 98.07750 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 98.07750 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 32.69250 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 98.07750 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 32.69250 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 98.07750 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 32.69250 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 32.69250 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 32.69250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 40 REMARK 465 MET A 41 REMARK 465 PRO A 138 REMARK 465 PRO A 139 REMARK 465 ALA A 140 REMARK 465 HIS A 141 REMARK 465 SER B 40 REMARK 465 MET B 41 REMARK 465 LYS B 42 REMARK 465 GLY B 43 REMARK 465 SER B 44 REMARK 465 GLY B 45 REMARK 465 PRO B 138 REMARK 465 PRO B 139 REMARK 465 ALA B 140 REMARK 465 HIS B 141 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 44 OG REMARK 470 GLN A 46 CG CD OE1 NE2 REMARK 470 ARG A 60 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 76 CE NZ REMARK 470 THR A 78 CG2 REMARK 470 LYS A 91 CE NZ REMARK 470 LYS A 93 CE NZ REMARK 470 ASN A 95 CG OD1 ND2 REMARK 470 LYS A 100 NZ REMARK 470 ARG A 106 CD NE CZ NH1 NH2 REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 MET A 114 CE REMARK 470 LYS A 120 CE NZ REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 GLN A 136 CG CD OE1 NE2 REMARK 470 ARG B 60 CG CD NE CZ NH1 NH2 REMARK 470 THR B 78 CG2 REMARK 470 ARG B 90 NE CZ NH1 NH2 REMARK 470 LYS B 91 NZ REMARK 470 LYS B 111 NZ REMARK 470 MET B 114 CE REMARK 470 LYS B 120 CE NZ REMARK 470 ARG B 121 NE CZ NH1 NH2 REMARK 470 GLN B 133 CG CD OE1 NE2 REMARK 470 GLN B 136 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 44 105.39 168.59 REMARK 500 GLN A 46 -161.10 -105.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1138 DBREF 2YPR A 42 141 UNP Q99581 FEV_HUMAN 42 141 DBREF 2YPR B 42 141 UNP Q99581 FEV_HUMAN 42 141 SEQADV 2YPR SER A 40 UNP Q99581 EXPRESSION TAG SEQADV 2YPR MET A 41 UNP Q99581 EXPRESSION TAG SEQADV 2YPR SER B 40 UNP Q99581 EXPRESSION TAG SEQADV 2YPR MET B 41 UNP Q99581 EXPRESSION TAG SEQRES 1 A 102 SER MET LYS GLY SER GLY GLN ILE GLN LEU TRP GLN PHE SEQRES 2 A 102 LEU LEU GLU LEU LEU ALA ASP ARG ALA ASN ALA GLY CYS SEQRES 3 A 102 ILE ALA TRP GLU GLY GLY HIS GLY GLU PHE LYS LEU THR SEQRES 4 A 102 ASP PRO ASP GLU VAL ALA ARG ARG TRP GLY GLU ARG LYS SEQRES 5 A 102 SER LYS PRO ASN MET ASN TYR ASP LYS LEU SER ARG ALA SEQRES 6 A 102 LEU ARG TYR TYR TYR ASP LYS ASN ILE MET SER LYS VAL SEQRES 7 A 102 HIS GLY LYS ARG TYR ALA TYR ARG PHE ASP PHE GLN GLY SEQRES 8 A 102 LEU ALA GLN ALA CYS GLN PRO PRO PRO ALA HIS SEQRES 1 B 102 SER MET LYS GLY SER GLY GLN ILE GLN LEU TRP GLN PHE SEQRES 2 B 102 LEU LEU GLU LEU LEU ALA ASP ARG ALA ASN ALA GLY CYS SEQRES 3 B 102 ILE ALA TRP GLU GLY GLY HIS GLY GLU PHE LYS LEU THR SEQRES 4 B 102 ASP PRO ASP GLU VAL ALA ARG ARG TRP GLY GLU ARG LYS SEQRES 5 B 102 SER LYS PRO ASN MET ASN TYR ASP LYS LEU SER ARG ALA SEQRES 6 B 102 LEU ARG TYR TYR TYR ASP LYS ASN ILE MET SER LYS VAL SEQRES 7 B 102 HIS GLY LYS ARG TYR ALA TYR ARG PHE ASP PHE GLN GLY SEQRES 8 B 102 LEU ALA GLN ALA CYS GLN PRO PRO PRO ALA HIS HET GOL A1138 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *9(H2 O) HELIX 1 1 GLN A 48 ALA A 58 1 11 HELIX 2 2 ASP A 59 ALA A 63 5 5 HELIX 3 3 ASP A 79 LYS A 91 1 13 HELIX 4 4 ASN A 97 ARG A 106 1 10 HELIX 5 5 ARG A 106 LYS A 111 1 6 HELIX 6 6 ASP A 127 GLN A 136 1 10 HELIX 7 7 GLN B 48 ALA B 58 1 11 HELIX 8 8 ASP B 59 ALA B 63 5 5 HELIX 9 9 ASP B 79 LYS B 91 1 13 HELIX 10 10 ASN B 97 TYR B 108 1 12 HELIX 11 11 ASP B 127 GLN B 136 1 10 SHEET 1 AA 4 ALA A 67 TRP A 68 0 SHEET 2 AA 4 GLU A 74 LYS A 76 -1 O LYS A 76 N ALA A 67 SHEET 3 AA 4 ALA A 123 PHE A 126 -1 O TYR A 124 N PHE A 75 SHEET 4 AA 4 MET A 114 LYS A 116 -1 O SER A 115 N ARG A 125 SHEET 1 BA 4 ALA B 67 TRP B 68 0 SHEET 2 BA 4 GLU B 74 LYS B 76 -1 O LYS B 76 N ALA B 67 SHEET 3 BA 4 ALA B 123 PHE B 126 -1 O TYR B 124 N PHE B 75 SHEET 4 BA 4 MET B 114 LYS B 116 -1 O SER B 115 N ARG B 125 SSBOND 1 CYS A 135 CYS B 135 1555 1555 2.95 CISPEP 1 GLY A 43 SER A 44 0 0.05 SITE 1 AC1 2 ARG A 121 TYR A 122 CRYST1 130.770 130.770 130.770 90.00 90.00 90.00 P 43 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007647 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007647 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007647 0.00000