HEADER ISOMERASE 02-APR-07 2YRF TITLE CRYSTAL STRUCTURE OF 5-METHYLTHIORIBOSE 1-PHOSPHATE ISOMERASE FROM TITLE 2 BACILLUS SUBTILIS COMPLEXED WITH SULFATE ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MTR-1-P ISOMERASE, S-METHYL-5-THIORIBOSE-1-PHOSPHATE COMPND 5 ISOMERASE; COMPND 6 EC: 5.3.1.23; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: MTNA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS ISOMERASE, METHIONINE SALVAGE PATHWAY EXPDTA X-RAY DIFFRACTION AUTHOR H.TAMURA,T.INOUE,Y.KAI,H.MATSUMURA REVDAT 4 25-OCT-23 2YRF 1 REMARK SEQADV REVDAT 3 13-JUL-11 2YRF 1 VERSN REVDAT 2 24-FEB-09 2YRF 1 VERSN REVDAT 1 22-JAN-08 2YRF 0 JRNL AUTH H.TAMURA,Y.SAITO,H.ASHIDA,T.INOUE,Y.KAI,A.YOKOTA,H.MATSUMURA JRNL TITL CRYSTAL STRUCTURE OF 5-METHYLTHIORIBOSE 1-PHOSPHATE JRNL TITL 2 ISOMERASE PRODUCT COMPLEX FROM BACILLUS SUBTILIS: JRNL TITL 3 IMPLICATIONS FOR CATALYTIC MECHANISM JRNL REF PROTEIN SCI. V. 17 126 2008 JRNL REFN ISSN 0961-8368 JRNL PMID 18156470 JRNL DOI 10.1110/PS.073169008 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 301419.910 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 18648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 915 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2666 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE : 0.3580 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 147 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.029 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5261 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.33000 REMARK 3 B22 (A**2) : 1.33000 REMARK 3 B33 (A**2) : -2.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.48 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.68 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.990 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 22.89 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : SO4.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : SO4.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YRF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000027039. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-04 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18662 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 69.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1W2W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM MES, 50MM TRIS (PH7.4), 1.55M REMARK 280 AMMONIUM SULFATE, 5% 1,4-DIOXANE, 6% GLYCEROL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.21800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.60900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 115.82700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 HIS A 3 REMARK 465 SER A 4 REMARK 465 PHE A 5 REMARK 465 ALA A 6 REMARK 465 VAL A 7 REMARK 465 PRO A 8 REMARK 465 ARG A 9 REMARK 465 GLU A 350 REMARK 465 LYS A 351 REMARK 465 VAL A 352 REMARK 465 HIS A 353 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 HIS B 3 REMARK 465 SER B 4 REMARK 465 PHE B 5 REMARK 465 ALA B 6 REMARK 465 VAL B 7 REMARK 465 PRO B 8 REMARK 465 GLU B 350 REMARK 465 LYS B 351 REMARK 465 VAL B 352 REMARK 465 HIS B 353 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 349 CA GLY A 349 C 0.096 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 349 N - CA - C ANGL. DEV. = 21.8 DEGREES REMARK 500 LYS B 14 N - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 PRO B 95 C - N - CA ANGL. DEV. = 10.4 DEGREES REMARK 500 LEU B 185 CA - CB - CG ANGL. DEV. = 31.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 15 -0.22 -45.90 REMARK 500 ALA A 53 -60.21 -22.87 REMARK 500 THR A 73 174.55 142.93 REMARK 500 SER A 93 -70.81 -52.25 REMARK 500 PRO A 95 -91.33 -84.78 REMARK 500 THR A 96 -43.23 -3.47 REMARK 500 ASN A 99 -27.09 -38.37 REMARK 500 ASN A 113 42.01 -144.72 REMARK 500 SER A 116 -157.37 -105.74 REMARK 500 CYS A 160 -159.87 51.54 REMARK 500 ALA A 162 57.11 -94.78 REMARK 500 THR A 167 -117.39 -124.13 REMARK 500 SER A 168 -41.75 -130.85 REMARK 500 TYR A 170 -50.56 67.41 REMARK 500 THR A 172 -72.71 -103.12 REMARK 500 LYS A 183 -14.26 -49.79 REMARK 500 VAL A 197 0.22 -68.32 REMARK 500 MET A 222 -11.56 -45.60 REMARK 500 ARG A 241 127.24 -170.77 REMARK 500 ASP A 265 51.37 39.02 REMARK 500 ALA A 285 -17.75 -45.95 REMARK 500 ASN A 314 70.03 -119.84 REMARK 500 HIS A 322 -14.96 -49.18 REMARK 500 GLN A 345 -70.62 -63.59 REMARK 500 THR B 16 13.39 -148.00 REMARK 500 ALA B 17 142.76 -170.50 REMARK 500 ALA B 61 -70.04 -62.68 REMARK 500 ALA B 68 9.02 -54.24 REMARK 500 LYS B 69 -77.40 -85.19 REMARK 500 ASP B 70 66.58 -66.19 REMARK 500 THR B 73 115.94 -168.78 REMARK 500 ASP B 85 -39.25 -27.92 REMARK 500 SER B 93 -73.70 -66.72 REMARK 500 SER B 110 31.17 -90.93 REMARK 500 CYS B 160 -143.77 78.59 REMARK 500 ASN B 161 76.99 -153.57 REMARK 500 ARG B 169 157.49 173.66 REMARK 500 TYR B 170 -50.83 83.21 REMARK 500 THR B 172 -54.93 -127.85 REMARK 500 ASP B 184 86.04 47.07 REMARK 500 THR B 194 86.69 59.47 REMARK 500 SER B 221 20.32 -76.73 REMARK 500 ALA B 239 171.64 -43.12 REMARK 500 ARG B 241 128.24 -170.53 REMARK 500 LYS B 244 4.31 -49.12 REMARK 500 ASP B 247 108.99 -54.49 REMARK 500 LYS B 251 143.25 -29.32 REMARK 500 THR B 276 9.29 -66.85 REMARK 500 LYS B 280 22.00 -77.67 REMARK 500 CYS B 283 170.22 179.45 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 502 DBREF 2YRF A 1 353 UNP O31662 MTNA_BACSU 1 353 DBREF 2YRF B 1 353 UNP O31662 MTNA_BACSU 1 353 SEQADV 2YRF MET A -20 UNP O31662 EXPRESSION TAG SEQADV 2YRF GLY A -19 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER A -18 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER A -17 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS A -16 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS A -15 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS A -14 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS A -13 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS A -12 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS A -11 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER A -10 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER A -9 UNP O31662 EXPRESSION TAG SEQADV 2YRF GLY A -8 UNP O31662 EXPRESSION TAG SEQADV 2YRF LEU A -7 UNP O31662 EXPRESSION TAG SEQADV 2YRF VAL A -6 UNP O31662 EXPRESSION TAG SEQADV 2YRF PRO A -5 UNP O31662 EXPRESSION TAG SEQADV 2YRF ARG A -4 UNP O31662 EXPRESSION TAG SEQADV 2YRF GLY A -3 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER A -2 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS A -1 UNP O31662 EXPRESSION TAG SEQADV 2YRF MET A 0 UNP O31662 EXPRESSION TAG SEQADV 2YRF MET B -20 UNP O31662 EXPRESSION TAG SEQADV 2YRF GLY B -19 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER B -18 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER B -17 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS B -16 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS B -15 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS B -14 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS B -13 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS B -12 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS B -11 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER B -10 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER B -9 UNP O31662 EXPRESSION TAG SEQADV 2YRF GLY B -8 UNP O31662 EXPRESSION TAG SEQADV 2YRF LEU B -7 UNP O31662 EXPRESSION TAG SEQADV 2YRF VAL B -6 UNP O31662 EXPRESSION TAG SEQADV 2YRF PRO B -5 UNP O31662 EXPRESSION TAG SEQADV 2YRF ARG B -4 UNP O31662 EXPRESSION TAG SEQADV 2YRF GLY B -3 UNP O31662 EXPRESSION TAG SEQADV 2YRF SER B -2 UNP O31662 EXPRESSION TAG SEQADV 2YRF HIS B -1 UNP O31662 EXPRESSION TAG SEQADV 2YRF MET B 0 UNP O31662 EXPRESSION TAG SEQRES 1 A 374 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 374 LEU VAL PRO ARG GLY SER HIS MET MET THR HIS SER PHE SEQRES 3 A 374 ALA VAL PRO ARG SER VAL GLU TRP LYS GLU THR ALA ILE SEQRES 4 A 374 THR ILE LEU ASN GLN GLN LYS LEU PRO ASP GLU THR GLU SEQRES 5 A 374 TYR LEU GLU LEU THR THR LYS GLU ASP VAL PHE ASP ALA SEQRES 6 A 374 ILE VAL THR LEU LYS VAL ARG GLY ALA PRO ALA ILE GLY SEQRES 7 A 374 ILE THR ALA ALA PHE GLY LEU ALA LEU ALA ALA LYS ASP SEQRES 8 A 374 ILE GLU THR ASP ASN VAL THR GLU PHE ARG ARG ARG LEU SEQRES 9 A 374 GLU ASP ILE LYS GLN TYR LEU ASN SER SER ARG PRO THR SEQRES 10 A 374 ALA ILE ASN LEU SER TRP ALA LEU GLU ARG LEU SER HIS SEQRES 11 A 374 SER VAL GLU ASN ALA ILE SER VAL ASN GLU ALA LYS THR SEQRES 12 A 374 ASN LEU VAL HIS GLU ALA ILE GLN ILE GLN VAL GLU ASP SEQRES 13 A 374 GLU GLU THR CYS ARG LEU ILE GLY GLN ASN ALA LEU GLN SEQRES 14 A 374 LEU PHE LYS LYS GLY ASP ARG ILE MET THR ILE CYS ASN SEQRES 15 A 374 ALA GLY SER ILE ALA THR SER ARG TYR GLY THR ALA LEU SEQRES 16 A 374 ALA PRO PHE TYR LEU ALA LYS GLN LYS ASP LEU GLY LEU SEQRES 17 A 374 HIS ILE TYR ALA CYS GLU THR ARG PRO VAL LEU GLN GLY SEQRES 18 A 374 SER ARG LEU THR ALA TRP GLU LEU MET GLN GLY GLY ILE SEQRES 19 A 374 ASP VAL THR LEU ILE THR ASP SER MET ALA ALA HIS THR SEQRES 20 A 374 MET LYS GLU LYS GLN ILE SER ALA VAL ILE VAL GLY ALA SEQRES 21 A 374 ASP ARG ILE ALA LYS ASN GLY ASP THR ALA ASN LYS ILE SEQRES 22 A 374 GLY THR TYR GLY LEU ALA ILE LEU ALA ASN ALA PHE ASP SEQRES 23 A 374 ILE PRO PHE PHE VAL ALA ALA PRO LEU SER THR PHE ASP SEQRES 24 A 374 THR LYS VAL LYS CYS GLY ALA ASP ILE PRO ILE GLU GLU SEQRES 25 A 374 ARG ASP PRO GLU GLU VAL ARG GLN ILE SER GLY VAL ARG SEQRES 26 A 374 THR ALA PRO SER ASN VAL PRO VAL PHE ASN PRO ALA PHE SEQRES 27 A 374 ASP ILE THR PRO HIS ASP LEU ILE SER GLY ILE ILE THR SEQRES 28 A 374 GLU LYS GLY ILE MET THR GLY ASN TYR GLU GLU GLU ILE SEQRES 29 A 374 GLU GLN LEU PHE LYS GLY GLU LYS VAL HIS SEQRES 1 B 374 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 374 LEU VAL PRO ARG GLY SER HIS MET MET THR HIS SER PHE SEQRES 3 B 374 ALA VAL PRO ARG SER VAL GLU TRP LYS GLU THR ALA ILE SEQRES 4 B 374 THR ILE LEU ASN GLN GLN LYS LEU PRO ASP GLU THR GLU SEQRES 5 B 374 TYR LEU GLU LEU THR THR LYS GLU ASP VAL PHE ASP ALA SEQRES 6 B 374 ILE VAL THR LEU LYS VAL ARG GLY ALA PRO ALA ILE GLY SEQRES 7 B 374 ILE THR ALA ALA PHE GLY LEU ALA LEU ALA ALA LYS ASP SEQRES 8 B 374 ILE GLU THR ASP ASN VAL THR GLU PHE ARG ARG ARG LEU SEQRES 9 B 374 GLU ASP ILE LYS GLN TYR LEU ASN SER SER ARG PRO THR SEQRES 10 B 374 ALA ILE ASN LEU SER TRP ALA LEU GLU ARG LEU SER HIS SEQRES 11 B 374 SER VAL GLU ASN ALA ILE SER VAL ASN GLU ALA LYS THR SEQRES 12 B 374 ASN LEU VAL HIS GLU ALA ILE GLN ILE GLN VAL GLU ASP SEQRES 13 B 374 GLU GLU THR CYS ARG LEU ILE GLY GLN ASN ALA LEU GLN SEQRES 14 B 374 LEU PHE LYS LYS GLY ASP ARG ILE MET THR ILE CYS ASN SEQRES 15 B 374 ALA GLY SER ILE ALA THR SER ARG TYR GLY THR ALA LEU SEQRES 16 B 374 ALA PRO PHE TYR LEU ALA LYS GLN LYS ASP LEU GLY LEU SEQRES 17 B 374 HIS ILE TYR ALA CYS GLU THR ARG PRO VAL LEU GLN GLY SEQRES 18 B 374 SER ARG LEU THR ALA TRP GLU LEU MET GLN GLY GLY ILE SEQRES 19 B 374 ASP VAL THR LEU ILE THR ASP SER MET ALA ALA HIS THR SEQRES 20 B 374 MET LYS GLU LYS GLN ILE SER ALA VAL ILE VAL GLY ALA SEQRES 21 B 374 ASP ARG ILE ALA LYS ASN GLY ASP THR ALA ASN LYS ILE SEQRES 22 B 374 GLY THR TYR GLY LEU ALA ILE LEU ALA ASN ALA PHE ASP SEQRES 23 B 374 ILE PRO PHE PHE VAL ALA ALA PRO LEU SER THR PHE ASP SEQRES 24 B 374 THR LYS VAL LYS CYS GLY ALA ASP ILE PRO ILE GLU GLU SEQRES 25 B 374 ARG ASP PRO GLU GLU VAL ARG GLN ILE SER GLY VAL ARG SEQRES 26 B 374 THR ALA PRO SER ASN VAL PRO VAL PHE ASN PRO ALA PHE SEQRES 27 B 374 ASP ILE THR PRO HIS ASP LEU ILE SER GLY ILE ILE THR SEQRES 28 B 374 GLU LYS GLY ILE MET THR GLY ASN TYR GLU GLU GLU ILE SEQRES 29 B 374 GLU GLN LEU PHE LYS GLY GLU LYS VAL HIS HET SO4 A 501 5 HET SO4 B 502 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *94(H2 O) HELIX 1 1 THR A 37 THR A 47 1 11 HELIX 2 2 GLY A 52 ALA A 68 1 17 HELIX 3 3 ASN A 75 SER A 92 1 18 HELIX 4 4 ILE A 98 SER A 110 1 13 HELIX 5 5 VAL A 117 LEU A 147 1 31 HELIX 6 6 GLN A 148 PHE A 150 5 3 HELIX 7 7 GLY A 163 THR A 167 5 5 HELIX 8 8 LEU A 174 LYS A 183 1 10 HELIX 9 9 LEU A 203 GLY A 211 1 9 HELIX 10 10 MET A 222 LYS A 230 1 9 HELIX 11 11 GLY A 253 PHE A 264 1 12 HELIX 12 12 PRO A 273 SER A 275 5 3 HELIX 13 13 CYS A 283 ILE A 287 5 5 HELIX 14 14 PRO A 294 ARG A 298 1 5 HELIX 15 15 PRO A 321 ILE A 325 5 5 HELIX 16 16 ASN A 338 PHE A 347 1 10 HELIX 17 17 THR B 37 THR B 47 1 11 HELIX 18 18 GLY B 52 ALA B 68 1 17 HELIX 19 19 VAL B 76 SER B 92 1 17 HELIX 20 20 ALA B 97 SER B 110 1 14 HELIX 21 21 SER B 116 GLN B 148 1 33 HELIX 22 22 LEU B 174 LYS B 183 1 10 HELIX 23 23 LEU B 198 LEU B 203 1 6 HELIX 24 24 LEU B 203 GLY B 211 1 9 HELIX 25 25 THR B 219 SER B 221 5 3 HELIX 26 26 MET B 222 GLN B 231 1 10 HELIX 27 27 GLY B 253 ASP B 265 1 13 HELIX 28 28 PRO B 273 SER B 275 5 3 HELIX 29 29 CYS B 283 ILE B 287 5 5 HELIX 30 30 ASP B 293 VAL B 297 5 5 HELIX 31 31 PRO B 321 ILE B 325 5 5 HELIX 32 32 ASN B 338 GLN B 345 1 8 SHEET 1 A 3 VAL A 11 LYS A 14 0 SHEET 2 A 3 ALA A 17 LEU A 21 -1 O ALA A 17 N LYS A 14 SHEET 3 A 3 TYR A 32 LEU A 35 -1 O LEU A 35 N ILE A 18 SHEET 1 B 7 LEU A 217 ILE A 218 0 SHEET 2 B 7 HIS A 188 CYS A 192 1 N ALA A 191 O ILE A 218 SHEET 3 B 7 ARG A 155 THR A 158 1 N ILE A 156 O TYR A 190 SHEET 4 B 7 ALA A 234 VAL A 237 1 O ILE A 236 N MET A 157 SHEET 5 B 7 PHE A 268 ALA A 271 1 O PHE A 269 N VAL A 235 SHEET 6 B 7 GLY A 327 ILE A 329 1 O ILE A 329 N VAL A 270 SHEET 7 B 7 ILE A 334 MET A 335 -1 O MET A 335 N ILE A 328 SHEET 1 C 4 PHE A 277 ASP A 278 0 SHEET 2 C 4 ARG A 241 ALA A 243 1 N ILE A 242 O ASP A 278 SHEET 3 C 4 THR A 248 LYS A 251 -1 O ALA A 249 N ARG A 241 SHEET 4 C 4 PHE A 317 THR A 320 -1 O THR A 320 N THR A 248 SHEET 1 D 2 GLN A 299 ILE A 300 0 SHEET 2 D 2 VAL A 303 ARG A 304 -1 O VAL A 303 N ILE A 300 SHEET 1 E 3 VAL B 11 TRP B 13 0 SHEET 2 E 3 ILE B 18 LEU B 21 -1 O THR B 19 N GLU B 12 SHEET 3 E 3 TYR B 32 LEU B 35 -1 O LEU B 35 N ILE B 18 SHEET 1 F 7 VAL B 215 ILE B 218 0 SHEET 2 F 7 HIS B 188 CYS B 192 1 N ALA B 191 O ILE B 218 SHEET 3 F 7 ARG B 155 ILE B 159 1 N ILE B 156 O TYR B 190 SHEET 4 F 7 ALA B 234 VAL B 237 1 O ILE B 236 N MET B 157 SHEET 5 F 7 PHE B 268 ALA B 271 1 O PHE B 269 N VAL B 237 SHEET 6 F 7 GLY B 327 THR B 330 1 O ILE B 329 N VAL B 270 SHEET 7 F 7 GLY B 333 MET B 335 -1 O GLY B 333 N THR B 330 SHEET 1 G 4 PHE B 277 ASP B 278 0 SHEET 2 G 4 ARG B 241 ALA B 243 1 N ILE B 242 O ASP B 278 SHEET 3 G 4 THR B 248 LYS B 251 -1 O ALA B 249 N ARG B 241 SHEET 4 G 4 PHE B 317 THR B 320 -1 O ASP B 318 N ASN B 250 SHEET 1 H 2 GLN B 299 ILE B 300 0 SHEET 2 H 2 VAL B 303 ARG B 304 -1 O VAL B 303 N ILE B 300 SSBOND 1 CYS A 283 CYS B 283 1555 4564 2.93 CISPEP 1 LEU A 26 PRO A 27 0 0.15 CISPEP 2 ARG A 195 PRO A 196 0 -6.25 CISPEP 3 LEU B 26 PRO B 27 0 -0.24 CISPEP 4 ARG B 195 PRO B 196 0 -2.54 SITE 1 AC1 6 ARG A 51 GLY A 52 ARG A 94 CYS A 160 SITE 2 AC1 6 GLN A 199 LYS A 251 SITE 1 AC2 7 ARG B 51 GLY B 52 ARG B 94 CYS B 160 SITE 2 AC2 7 GLN B 199 LYS B 251 PHE B 317 CRYST1 69.273 69.273 154.436 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014436 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014436 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006475 0.00000